mRNA_16488 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|353455
Unique NamemRNA_16488
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|353455 vs. uniprot
Match: A0A835ZDD6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDD6_9STRA)

HSP 1 Score: 1409 bits (3648), Expect = 0.000e+0
Identity = 824/824 (100.00%), Postives = 824/824 (100.00%), Query Frame = 1
Query:  100 MAQQDDNSSTGSCKGSPASAPEPFFDGTSEAQGCETPSSSAQGRPGMATRGPSSDPSVPQGQHNDPYGALALSSACDNPYYGSLSSGRGGEMVDLAQQVKSLLQPDIHEAIRRSRNLTAAAVGNLQEKFADYAHHVAEVQEGAYQQRREQQRRDTELSDALTSDLQALQTRLEEAERRAFXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVNSLPDDAAASPQQRRQLPYTPGSVYHSAAQQMLSAPRAEFNEFNLRTFGGGAARRDDDERSRISMHSTRSLLRPTPXXXXXXXXXXXXXEGDKGSLKDEARAQLDGAVRVARSQQLWTLTQTQARMDATQQLAAERAEHDTKVAATEAALQREREILRMERKEVERSARANELLLRQTQLEGLAQVRQLAAKRTAMHAEQRAFEHVKSQPPFSTASRDGDGSESIRSSAPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXERSGSGSRRGAPSPAPAAVWPGQPAGLPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFNTTVFAVVIRVVNDGGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAYAHWSAPHTTDSDSAYDSDSSRSHGSDNFNSDIDADYSDHSTTARRQAQQHLAQLRAVKRTARSVTQDRDAALRQPSA 2571
            MAQQDDNSSTGSCKGSPASAPEPFFDGTSEAQGCETPSSSAQGRPGMATRGPSSDPSVPQGQHNDPYGALALSSACDNPYYGSLSSGRGGEMVDLAQQVKSLLQPDIHEAIRRSRNLTAAAVGNLQEKFADYAHHVAEVQEGAYQQRREQQRRDTELSDALTSDLQALQTRLEEAERRAFXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVNSLPDDAAASPQQRRQLPYTPGSVYHSAAQQMLSAPRAEFNEFNLRTFGGGAARRDDDERSRISMHSTRSLLRPTPXXXXXXXXXXXXXEGDKGSLKDEARAQLDGAVRVARSQQLWTLTQTQARMDATQQLAAERAEHDTKVAATEAALQREREILRMERKEVERSARANELLLRQTQLEGLAQVRQLAAKRTAMHAEQRAFEHVKSQPPFSTASRDGDGSESIRSSAPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXERSGSGSRRGAPSPAPAAVWPGQPAGLPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFNTTVFAVVIRVVNDGGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAYAHWSAPHTTDSDSAYDSDSSRSHGSDNFNSDIDADYSDHSTTARRQAQQHLAQLRAVKRTARSVTQDRDAALRQPSA
Sbjct:    1 MAQQDDNSSTGSCKGSPASAPEPFFDGTSEAQGCETPSSSAQGRPGMATRGPSSDPSVPQGQHNDPYGALALSSACDNPYYGSLSSGRGGEMVDLAQQVKSLLQPDIHEAIRRSRNLTAAAVGNLQEKFADYAHHVAEVQEGAYQQRREQQRRDTELSDALTSDLQALQTRLEEAERRAFXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVNSLPDDAAASPQQRRQLPYTPGSVYHSAAQQMLSAPRAEFNEFNLRTFGGGAARRDDDERSRISMHSTRSLLRPTPXXXXXXXXXXXXXEGDKGSLKDEARAQLDGAVRVARSQQLWTLTQTQARMDATQQLAAERAEHDTKVAATEAALQREREILRMERKEVERSARANELLLRQTQLEGLAQVRQLAAKRTAMHAEQRAFEHVKSQPPFSTASRDGDGSESIRSSAPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXERSGSGSRRGAPSPAPAAVWPGQPAGLPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFNTTVFAVVIRVVNDGGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAYAHWSAPHTTDSDSAYDSDSSRSHGSDNFNSDIDADYSDHSTTARRQAQQHLAQLRAVKRTARSVTQDRDAALRQPSA 824          
BLAST of jgi.p|Trimin1|353455 vs. uniprot
Match: A0A835Z3V8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3V8_9STRA)

HSP 1 Score: 1154 bits (2984), Expect = 0.000e+0
Identity = 691/847 (81.58%), Postives = 717/847 (84.65%), Query Frame = 1
Query:  100 MAQQDDNSSTGSCKGSPASAPEPFFDGTSEAQGCETPSSSAQGRPGMATRGPSSDPSVPQGQHNDPYGALALSSACDNPYYGSLSSGRGGEMVDLAQQVKSLLQPDIHEAIRRSRNLTAAAVGNLQEKFADYAHHVAEVQEGAYQQRREQQRRDTELSDALTSDLQALQTRLEEAERRAFXXXXXXXXXXXXXXXXXXXXXXXXXXL----------------------AKVNSLPDDAAASPQQRRQLPYTPGSVYHSAAQQMLSAPRAEFNEFNLRTFGGGAARRDDDERSRISMHSTRSLLRPTPXXXXXXXXXXXXX-----------------------------------EGDKGSLKDEARAQLDGAVRVARSQQLWTLTQTQARMDATQQLAAERAEHDTKVAATEAALQREREILRMERKEVERSARANELLLRQTQLEGLAQVRQLAAKRTAMHAEQRAFEHVKSQPPFSTASRDGDGSESIRSSAPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXERSGS-GSRRGAPSPAPAAVWPGQPAGLPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGAL--WFNTTVFAVVIRVVNDGGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAYAHWSAPHTTDSDSAYDSDSSRSHGSDNFNSDIDADYSDHS 2460
            MAQQDD+SST SCKGSPASAPEPFFDGTSEAQGCETPSSSAQGRPGMA RGPSSDPSVPQGQ+NDPYGALALSSACDN Y GS+SSGRGGEMVDLAQQVKSLLQPDIHE IRRS NLTAAAVGNLQEKFADYA+HVAEVQEGAYQQRRE QRRDTELSDALTSDLQALQTRLEEAERRAF      XXXXXXXXXXXXXXXXXXXX                       AKVNSL D+AAASPQQRRQLPYTPGSV+HSAAQQ+LSAPRAE NEFNLRTFGG AARRDD+ERSRISMHSTRSLLRPTP                                                EGDKGSLKDEA AQLDGAVRVARSQ+LWTLTQ QARMDATQQLAAERA+HDTK+AATEAALQREREILRMER+EVERSARANELLLRQTQLEGLAQ RQLAA RTAMHAEQRAFEHVKS+  FS ASR GDGSES+RS+APSR      XXXXXXXXXXXXXXXXXXXXX      G+   A +PAPAAV PGQPA LP EAWFD+QGRAITRMAI+LRADDLP TCITGSSLAPLVNLRRMLPSLITEKANHK QKPR+GPMWPALISSDDFGAL  WF+TTVFAVV RVVNDGG NYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELA DLVRWVVATGFPLKHFV E  TAAAEVISADSRHDNF+LSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLR+QADL IYTAAAREDDRD+YPPDL A+AHWSAPHT DSDSAYDSD  RSH SD+FNSDIDADYSDHS
Sbjct:    1 MAQQDDSSSTDSCKGSPASAPEPFFDGTSEAQGCETPSSSAQGRPGMAARGPSSDPSVPQGQYNDPYGALALSSACDNLYCGSVSSGRGGEMVDLAQQVKSLLQPDIHEVIRRSLNLTAAAVGNLQEKFADYANHVAEVQEGAYQQRREPQRRDTELSDALTSDLQALQTRLEEAERRAFEWADRAXXXXXXXXXXXXXXXXXXXXXLAEDARSAENLRTVMVYINRLEAKVNSLLDNAAASPQQRRQLPYTPGSVHHSAAQQVLSAPRAELNEFNLRTFGGSAARRDDNERSRISMHSTRSLLRPTPAMLPPRPGSVNYPPTSSATATVRDASARPPVPPFSFSLALPLAKAPAREGDKGSLKDEALAQLDGAVRVARSQKLWTLTQAQARMDATQQLAAERAKHDTKIAATEAALQREREILRMEREEVERSARANELLLRQTQLEGLAQERQLAANRTAMHAEQRAFEHVKSELAFSAASRGGDGSESVRSNAPSRRRDRDGXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPAAASAPAPAAVLPGQPACLPMEAWFDSQGRAITRMAIRLRADDLPRTCITGSSLAPLVNLRRMLPSLITEKANHKCQKPRNGPMWPALISSDDFGALSDWFSTTVFAVVNRVVNDGGGNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELATDLVRWVVATGFPLKHFVHEVSTAAAEVISADSRHDNFMLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRKQADLVIYTAAAREDDRDMYPPDLNAHAHWSAPHTADSDSAYDSDGGRSHSSDDFNSDIDADYSDHS 847          
BLAST of jgi.p|Trimin1|353455 vs. uniprot
Match: A0A835Z987_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z987_9STRA)

HSP 1 Score: 1050 bits (2716), Expect = 0.000e+0
Identity = 654/860 (76.05%), Postives = 668/860 (77.67%), Query Frame = 1
Query:   19 IADSAAAAPPAAAPSRLAEPSAAVSPAMAQQDDNSSTGSCKGSPASAPEPFFDGTSEAQGCETPSSSAQGRPGMATRGPSSDPSVPQGQHNDPYGALALSSACDNPYY--GSLSSGRGGEMVDLAQQVKSLLQPDIHEAIRRSRNLTAAAVGNLQE---KFADYAHHVAEVQEGAYQQRREQQRRDTELSDALTSDLQALQTRLEEAERRAFXXXXXXXXXXXXXXXXXXXXXXXXXXL----------------------AKVNSLPDDAAASPQQRRQLPYTPGSVYHSAAQQMLSAPRAEFNEFNLRTFGGGAARRDDDERSRISMHSTRSLLRPTPXXXXXXXXXXXXX-----------------------------------EGDKGSLKDEARAQLDGAVRVARSQQLWTLTQTQARMDATQQLAAERAEHDTKVAATEAALQREREILRMERKEVERSARANELLLRQTQLEGLAQVRQLAAKRTAMHAEQRAFEHVKSQPPFSTASRDGDGSESIRSSAPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXERSGSGSRR----GAPS--PAPAAVWPGQPAGLPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFNTTVFAVVIRVVNDGGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAYAHWSAPHTTDSDSAYDSD 2394
            I DSA  APPAAAPSRLAEPSAAVSPAMAQQDDNSSTGSCKGSPASAPEPFFDGTSEAQGCETPSSSAQGRPGMA RGPSSDPSVPQGQHNDP GALALSSAC NPY+  GS+SSGRGGEMVDLAQQVKSLLQPDIHEAI RS N TAAAVG LQE   KFA+YA HVA+VQE AYQQRRE              DLQALQTRL+EAERRAF                XXXXXXXXXX                       AKV+SL  DAAA  QQ RQLPYTPGS YHSA QQMLSAPRAE NEFNLRTFGG AARRDDDERSRISMHSTRSLLRPTP                                                EGDKGSLKDEARAQLDGAVRVA SQQLWTLTQTQARMDATQQLAAERAEHDTKVAATEAALQREREILRMER+EVERSARANELLLRQTQLEGLAQ RQLAA RTAMHAEQRAF+H KSQ  FS ASR GDGSES+ SSAPSR   XXXXXXXXXXXXXXXXXXXXXXXX             GAP+  PAPAAVWPGQPAGLPTEAWFDAQGRAITRMAI+LRADDLP TCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDG MWPALISSDDFGALWF+TTVFAVV RVVNDGGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPL+HFV EF TAAAEVIS DSR DNFVLSALLEVCRQQYSATAAAWT+IADDPQSHTTRDLLE                            AYAHWSAPHT D DS YDSD
Sbjct:    3 IEDSAVEAPPAAAPSRLAEPSAAVSPAMAQQDDNSSTGSCKGSPASAPEPFFDGTSEAQGCETPSSSAQGRPGMAARGPSSDPSVPQGQHNDPCGALALSSACGNPYHRDGSVSSGRGGEMVDLAQQVKSLLQPDIHEAIHRSLNPTAAAVGGLQESSEKFANYAAHVADVQESAYQQRREXXXXXXXXXXXXXXDLQALQTRLKEAERRAFEWADRATVADKRVAAAXXXXXXXXXXXXAEEARSANNFRTVMVYFNRLEAKVSSLLMDAAAVSQQHRQLPYTPGSAYHSA-QQMLSAPRAELNEFNLRTFGGSAARRDDDERSRISMHSTRSLLRPTPAMLPPHPGSVNYPTTSSATATVRDASARPPVPTFSFSLALPLAKAPAREGDKGSLKDEARAQLDGAVRVAHSQQLWTLTQTQARMDATQQLAAERAEHDTKVAATEAALQREREILRMEREEVERSARANELLLRQTQLEGLAQERQLAANRTAMHAEQRAFDHAKSQLAFSAASRGGDGSESVHSSAPSRRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPAAAPAPAAVWPGQPAGLPTEAWFDAQGRAITRMAIRLRADDLPRTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGTMWPALISSDDFGALWFSTTVFAVVNRVVNDGGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLQHFVHEFSTAAAEVISTDSRQDNFVLSALLEVCRQQYSATAAAWTYIADDPQSHTTRDLLE----------------------------AYAHWSAPHTADGDSVYDSD 833          
BLAST of jgi.p|Trimin1|353455 vs. uniprot
Match: A0A836C9L9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L9_9STRA)

HSP 1 Score: 845 bits (2183), Expect = 1.040e-292
Identity = 509/716 (71.09%), Postives = 520/716 (72.63%), Query Frame = 1
Query:  373 MVDLAQQVKSLLQPDIHEAIRRSRNLTAAAVGNLQEKFADYAHHVAEVQEGAYQQRREQQRRDTELSDALTSDLQALQTRLEEAERRAFXXXXXXXXXXXXXXXXXXXXXXXXXXL----------------------AKVNSLPDDAAASPQQRRQLPYTPGSVYHSAAQQMLSAPRAEFNEFNLRTFGGGAARRDDDERSRISMHSTRSLLRPTPXXXXXXXXXXXXX-------------------EGDKGSLKDEARAQLDGAVRVARSQQLWTLTQTQARMDATQQLAAERAEHDTKVAATEAALQREREILRMERKEVERSARANELLLRQTQLEGLAQVRQLAAKRTAMHAEQRAFEHVKSQPPFSTASRDGDGSESIRSSAPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXERSGSGSRRGAPSPAPAAVWPGQPAGLPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFNTTVFAVVIRVVNDGGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAYAHWSAPHTTDSDSAYDSDS 2397
            MVDLAQQVKSLLQ DI E IRRS NLTAAAV +LQ KF DY  HVA++Q GAYQQRREQQRRDT+LSDAL SDLQALQTRLEEAERRAF          XXXXXXXXXXXXX   L                      AKVN L DDAAAS QQRRQL YTPGS YHSA QQMLSAPRAE +EFNLRTFGG AARRDDDERSRISMHSTRSLLRPTP                                EGDKGSLKDEARAQLDGAVR ARSQQLWTLTQTQAR D TQQLAAERAEHDTKVAATEAALQREREILRMER+EVERSARANELLLRQTQLEGLAQ RQ+AA RT MHAEQRAFEH                                                                                          GR ITRMAI+LRADDLP TCITGSSLAPLVNLRR+LPSLI EKANHKRQKPRDGPMWPALISSDDFGALWF+ TVF VV RVVNDGGDNYLVSSLSAQAAEWVSEGE LVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFV EF  AAA VISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLR+QADLAIYTAAAREDDRDIYPPDLKAYAHWSAP T DSDS YDSDS
Sbjct:    1 MVDLAQQVKSLLQADIPEPIRRSLNLTAAAVEDLQGKFVDYTVHVADMQAGAYQQRREQQRRDTDLSDALISDLQALQTRLEEAERRAFVWADRAMAADXXXXXXXXXXXXXESLLVAEEARSADNLRTVMVYVNRLEAKVNGLLDDAAASSQQRRQLSYTPGSAYHSA-QQMLSAPRAELHEFNLRTFGGSAARRDDDERSRISMHSTRSLLRPTPPMLPPRPGSVNYPPTXXXXXXXXXXXPRAPAREGDKGSLKDEARAQLDGAVREARSQQLWTLTQTQARTDPTQQLAAERAEHDTKVAATEAALQREREILRMEREEVERSARANELLLRQTQLEGLAQERQMAANRTGMHAEQRAFEH------------------------------------------------------------------------------------------GRTITRMAIRLRADDLPRTCITGSSLAPLVNLRRLLPSLIIEKANHKRQKPRDGPMWPALISSDDFGALWFSITVFTVVNRVVNDGGDNYLVSSLSAQAAEWVSEGECLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVHEFSAAAAGVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRKQADLAIYTAAAREDDRDIYPPDLKAYAHWSAPRTADSDSVYDSDS 625          
BLAST of jgi.p|Trimin1|353455 vs. uniprot
Match: A0A835Z0H2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0H2_9STRA)

HSP 1 Score: 668 bits (1723), Expect = 3.490e-225
Identity = 430/834 (51.56%), Postives = 476/834 (57.07%), Query Frame = 1
Query:   91 SPAMAQQDDNSSTGSCKGSPASAPEPFFDGTSEAQGCETPSSSAQGRPGMATRGPSSDPSVPQGQHNDPYGALALSSACDNPYYGSLSSGRGGEMVDLAQQVKSLLQPDIHEAIRRSRNLTAAAVGNLQEKFADYAHHVAEVQEGAYQQRREQQRRDTELSDALTSDLQALQTRLEEAERRAFXXXXXXXXXXXXXXXXXXXXXXXXXXL-----------------------------------------------AKVNSLPDDAAASPQQRRQLPYTPGSVYHSAAQQMLSAPRAEFNEFNLRTFGGGAARRDDDERSRISMHSTRSLLRPTPXXXXXXXXXXXXX------------------------------------EGDKGSLKDEARAQLDGAVRVARSQQLWTLTQTQARMDATQQLAAERAEHDTKVAATEAALQREREILRMERKEVERSARANELLLRQTQLEGLAQVRQLAAKRTAMHAEQRAFEHVKSQPPFSTASRDGDGSESIRSSAPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXERSGSGSRRGAPSPAPAAVWPGQPAGLPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFNTTVFAVVIRVVNDGGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAYA 2343
            SPAMAQQDDNSS GSCKGS ASAPEP FDGT EAQGCETPSSSAQGRP MA RGPSSDP VPQGQ NDP G L                    EMVDLAQQVKSLLQ DI E IRRS NLTAAA+ +LQ KF DYA H A++Q GAYQQRREQQRRDTELSDALTSDLQALQTRLEEAERRAF                          L                                               AKVNSL DDAAASPQQRRQL YTPGS YHSA QQMLSAPRAE NE NLRTFGG A RRDDDERSRISMHS+RSLLRPTP                                                 EGDKGSLKD+ARAQLDGAV  AR QQLWTLTQTQAR D TQQLAAERAEHDTKVAATEAALQ E+E+LR+ER+EVERSARANELLLRQTQLE LAQ R+LAAKR AMHAEQRAFEH +  P  S                                                                                  GR+ T                                              +  PMWPALI  +DFG+ WF++ V AV+  +++ GGDNYLVSSL+ +AAEW  + E L +SDT +LEW F RI++FLEL+RPAELAADLV WVV  GFPLK FV E+  A+  V+SAD + D FVLSALLEVCRQQY+  A +W HI + P  HTTR+LLE+LRRQA+ A Y A +RED+R +YP DL++Y+
Sbjct:  151 SPAMAQQDDNSSAGSCKGSTASAPEPLFDGTPEAQGCETPSSSAQGRPSMAARGPSSDPPVPQGQQNDPGGDL--------------------EMVDLAQQVKSLLQADIPEPIRRSFNLTAAAIEDLQGKFVDYAAHAADMQAGAYQQRREQQRRDTELSDALTSDLQALQTRLEEAERRAFEWADRAMAADECVAAADTHAAVLESRLVAEEARNAERXXXXXXXXXXXXXXXXXXXXXXXDNFRTVMVYVNRLEAKVNSLLDDAAASPQQRRQLSYTPGSAYHSA-QQMLSAPRAELNELNLRTFGGSAVRRDDDERSRISMHSSRSLLRPTPAIQLPPHPGSVNDPPISSATATVRDISARSPVAPFSFSLALPPAKAPAHEGDKGSLKDDARAQLDGAV--ARGQQLWTLTQTQARTDPTQQLAAERAEHDTKVAATEAALQCEQELLRVEREEVERSARANELLLRQTQLEALAQERELAAKRAAMHAEQRAFEHARCCPASS----------------------------------------------------------------------------------GRSRTT---------------------------------------------KQRPMWPALIKDEDFGSKWFSSVVRAVINCIISGGGDNYLVSSLTGEAAEWQKDREALTVSDTEQLEWFFTRIAKFLELRRPAELAADLVMWVVKPGFPLKDFVYEYSAASTAVLSADPKQDLFVLSALLEVCRQQYAIIAPSWAHIDEHPHKHTTRNLLEILRRQAERAKYQATSREDNRAVYPSDLRSYS 834          
BLAST of jgi.p|Trimin1|353455 vs. uniprot
Match: A0A836CL34_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL34_9STRA)

HSP 1 Score: 520 bits (1338), Expect = 7.330e-167
Identity = 267/297 (89.90%), Postives = 274/297 (92.26%), Query Frame = 1
Query: 1534 GAPSPA--PAAVWPGQPAGLPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFNTTVFAVVIRVVNDGG-DNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAYAHWSAPHTTDSDSAYDSDSSRSHGS 2415
            GAP+ A  PAAVWPGQPAGL TEAWFDAQG AITRMAI+LRADDLP TCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWF+TTVFAVV RVVNDGG D YLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFV +  TAA EVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDP SHTTRDLL+VLRRQADLAIY AAAREDDRDIYP D+KAYAHWSAP T DSDS Y SD   +HGS
Sbjct:  360 GAPAAALAPAAVWPGQPAGLLTEAWFDAQGHAITRMAIRLRADDLPRTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFSTTVFAVVDRVVNDGGGDTYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVHKVNTAAVEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPHSHTTRDLLKVLRRQADLAIYIAAAREDDRDIYPTDIKAYAHWSAPRTADSDSVYGSDGGCNHGS 656          
BLAST of jgi.p|Trimin1|353455 vs. uniprot
Match: A0A836CNV7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNV7_9STRA)

HSP 1 Score: 446 bits (1148), Expect = 3.920e-140
Identity = 238/294 (80.95%), Postives = 245/294 (83.33%), Query Frame = 1
Query: 1549 APAAVWPGQPAGLPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFNTTVFAVVIRVVNDGGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAYAHWSAPHTTDSDSAYDSDSSRSHGSDNFNS 2430
            APAAVWPG PAGLPTEAWFDAQGRAITRMAI+LRA+DLP TCITGSSLAPL NLRRMLPSLITEKANHKRQKPRDGPMWP LISSDDFGA WF+TTVFAVV RVVN GG NYLVSSLSAQAAE VSE ERLVLSDTARLEWLFARISQFLEL RPAELAADLVRWVVATGFPLKHFV EF TAAAEVISADSRHDNFVLSALLE                               LR+QADLAIYTAAAREDDRD+YPPDLKAYAHWSAP T DSDS Y+SDS  SHGSD+FNS
Sbjct:  269 APAAVWPGYPAGLPTEAWFDAQGRAITRMAIRLRANDLPRTCITGSSLAPLNNLRRMLPSLITEKANHKRQKPRDGPMWPVLISSDDFGAAWFSTTVFAVVNRVVNGGG-NYLVSSLSAQAAECVSESERLVLSDTARLEWLFARISQFLELNRPAELAADLVRWVVATGFPLKHFVHEFSTAAAEVISADSRHDNFVLSALLEA------------------------------LRKQADLAIYTAAAREDDRDMYPPDLKAYAHWSAPRTADSDSVYNSDSGCSHGSDDFNS 531          
BLAST of jgi.p|Trimin1|353455 vs. uniprot
Match: A0A835YVM6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVM6_9STRA)

HSP 1 Score: 412 bits (1058), Expect = 6.030e-133
Identity = 218/292 (74.66%), Postives = 232/292 (79.45%), Query Frame = 1
Query: 1585 LPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFNTTVFAVVIRVVNDGGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAE-LAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAYAHWSAPHTTDSDSAYDSDSSRSHGSDNFNSDIDADYSDH 2457
            +PT     A+GRAITRMAI+LRAD+LP TCIT S LAPLVNL RMLPSL TEKANHKRQKPRDG MWPALISSDDFGALWF+TTVFAVV RVVNDGGDNYL                                   FLELKRP+E L ADLVRWVVATGFPLKHFV EF TAAA+VISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTR LLEVLRR+ADLAIYTAAAREDDRDIYP DLKAYAHWSAP T DSD+ Y+SD  R+HG+ + NSDIDADYSD+
Sbjct:  120 VPTGEELAAKGRAITRMAIRLRADELPRTCITDSPLAPLVNLERMLPSLTTEKANHKRQKPRDGTMWPALISSDDFGALWFSTTVFAVVKRVVNDGGDNYL-----------------------------------FLELKRPSEKLVADLVRWVVATGFPLKHFVHEFSTAAAKVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRGLLEVLRRRADLAIYTAAAREDDRDIYPTDLKAYAHWSAPRTADSDNVYNSDGGRNHGNHDLNSDIDADYSDY 376          
BLAST of jgi.p|Trimin1|353455 vs. uniprot
Match: A0A835ZGI4_9STRA (CCHC-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGI4_9STRA)

HSP 1 Score: 251 bits (640), Expect = 1.370e-70
Identity = 123/269 (45.72%), Postives = 183/269 (68.03%), Query Frame = 1
Query: 1537 APSPAPAAVWPGQPAGLPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFNTTVFAVVIRVVNDGGDNYLVSSLSAQAAEWVSEGERLVL-SDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAY 2340
            AP+ A A   PG+   LP + WFD +G A+T++ + ++   +P   + G S+APLV ++++LP LI EKAN +RQ+ R  PMWP L +S D+G+ WF  T+ AV+ R+   GGDN+   +L  Q   W+ +G+ +   +D   L+W+F R+++ LEL+RP ELAADLVRWVV  G  L+ FV EF  A++ V+SAD  HDNFVL ALLEVCR QY +T +AW  I+ +P++HTT +LL++LR +A+ A++ A AR+D   +YP +L++Y
Sbjct:   73 APAEADADELPGRQPSLPRDGWFDTRGIALTKVQVDIQMSHIPQITLDGLSMAPLVTIQQILPDLIREKANAQRQRQR--PMWPTLRNSADYGSNWFAPTLRAVIERLATSGGDNHRTKTLRGQLPGWLRQGKEMAAEADPVLLDWIFERLAKHLELRRPGELAADLVRWVVKPGLALRDFVYEFAQASSAVLSADPHHDNFVLLALLEVCRHQYPSTNSAWRAISLNPRAHTTDELLDILRGEAEHAVHDAIARKDGLAVYPANLRSY 339          
BLAST of jgi.p|Trimin1|353455 vs. uniprot
Match: A0A835YUI7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUI7_9STRA)

HSP 1 Score: 179 bits (454), Expect = 1.460e-42
Identity = 109/272 (40.07%), Postives = 142/272 (52.21%), Query Frame = 1
Query: 1567 PGQPAGLPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFNTTVFAVVIRVVND--GGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAYAHWSAPHTTDSD 2376
            PG+P  LP  AWFD +G A+TR+ ++ +   LP T + G+SL PLVNL++MLPSLI  K   KR   R   MWP L +++DF A W   TV     R V    GGD                EG     SD  RL+W F R+++FLEL+RP+ELAA+LV W +  G PL+  V  F  AA  ++SAD+R D   L ALLE+ RQQY +T+A W  I D+P ++TT                               L  YAH SAP   D+D
Sbjct:  387 PGRPEALPAMAWFDERGNALTRIPVEYKPGVLPKTVVDGTSLTPLVNLQKMLPSLIRTKTAVKRLMMRPQGMWPTLPAAEDFDAEWVEQTVRRG--RGVGHACGGDTV--------------EGREA--SDQERLDWFFTRLAKFLELRRPSELAAELVSWCMRAGTPLRELVYAFNVAATNMLSADARQDQLCLFALLEILRQQYGSTSALWAAIDDEPSNYTTH------------------------------LATYAHSSAPRAVDAD 610          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353455 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A835ZDD6_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z3V8_9STRA0.000e+081.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z987_9STRA0.000e+076.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C9L9_9STRA1.040e-29271.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0H2_9STRA3.490e-22551.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CL34_9STRA7.330e-16789.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CNV7_9STRA3.920e-14080.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YVM6_9STRA6.030e-13374.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZGI4_9STRA1.370e-7045.72CCHC-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835YUI7_9STRA1.460e-4240.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_164contigContig_164:88772..91513 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|353455|estExt_Genemark1.C_Ctg_1640007
Hectar predicted targeting categoryother localisation
TranscriptId353777
TrackFilteredModels1
ProteinId353455
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353455gene_16488Tribonema minus UTEX_B_3156 geneContig_164 88772..91513 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_16488_1exon_16488_1Tribonema minus UTEX_B_3156 exonContig_164 88772..89491 +
exon_16488_2exon_16488_2Tribonema minus UTEX_B_3156 exonContig_164 89548..89811 +
exon_16488_3exon_16488_3Tribonema minus UTEX_B_3156 exonContig_164 89924..91513 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_16488UTR5_16488Tribonema minus UTEX_B_3156 five_prime_UTRContig_164 88772..88870 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_16488CDS_16488Tribonema minus UTEX_B_3156 CDSContig_164 88871..89491 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353455Trimin1|353455|estExt_Genemark1.C_Ctg_1640007Tribonema minus UTEX_B_3156 polypeptideContig_164 88871..91513 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_16488 ID=mRNA_16488|Name=jgi.p|Trimin1|353455|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2574bp|location=Sequence derived from alignment at Contig_164:88772..91513+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CGAACGGGGGGCATACCGATCGCGGACTCCGCTGCTGCGGCACCGCCTGC
AGCAGCACCCAGCCGCCTAGCGGAGCCAAGTGCCGCTGTATCTCCTGCTA
TGGCCCAGCAGGACGACAACAGCAGCACCGGCTCCTGCAAGGGCAGCCCC
GCGTCAGCGCCAGAGCCATTCTTTGACGGCACGTCAGAAGCTCAAGGCTG
CGAGACGCCATCGTCGTCTGCACAAGGGCGCCCCGGCATGGCCACCAGGG
GACCCAGCAGCGACCCATCTGTCCCGCAGGGACAGCACAACGACCCATAC
GGTGCCCTGGCGCTCTCCAGCGCCTGTGACAACCCCTACTACGGCTCCCT
CTCTTCGGGAAGGGGGGGTGAGATGGTGGATCTCGCTCAGCAAGTCAAGT
CTCTCCTGCAGCCGGACATCCATGAGGCCATCCGCCGCTCACGCAACCTC
ACCGCAGCAGCCGTTGGGAACCTCCAGGAGAAGTTCGCCGACTACGCTCA
CCACGTCGCGGAAGTGCAAGAGGGCGCCTACCAGCAGCGCCGCGAGCAGC
AGCGCCGCGACACAGAGCTCTCCGACGCGCTCACAAGCGATCTGCAGGCA
CTGCAGACTCGTCTGGAGGAGGCAGAGCGGCGCGCCTTCGAGTGGGCTGA
CCGTGCCATGGCTGCGGACGAGCGCGTGGCAGCGGCCGACACGCACGCCG
CCGCGCTGGAGTCGCGGCTGGCCAAGGTCAACAGCCTCCCTGACGACGCG
GCCGCATCCCCTCAGCAGCGTCGCCAGCTCCCCTACACGCCCGGCTCTGT
GTACCACTCAGCGGCGCAGCAGATGCTGTCGGCGCCGCGCGCTGAGTTCA
ACGAGTTTAACCTCCGCACGTTCGGCGGCGGCGCCGCACGCCGCGACGAC
GATGAGCGCTCGCGCATCAGCATGCACTCGACGCGCTCGCTGCTGCGCCC
CACACCGGCCATGCTCCCTCCGCGCCCTGGCTCCGCACCTGTGCGTGAGG
GCGACAAAGGCAGCCTGAAGGATGAGGCGCGTGCGCAGCTGGACGGCGCT
GTGCGCGTGGCCCGCAGCCAGCAGCTGTGGACTCTCACACAGACGCAAGC
GCGCATGGACGCCACGCAGCAGCTGGCGGCGGAGAGGGCCGAGCACGACA
CCAAGGTCGCAGCGACGGAGGCAGCGCTGCAACGCGAGCGGGAGATCCTG
CGCATGGAGCGCAAGGAGGTGGAGCGCAGCGCCCGCGCAAACGAGCTGTT
GCTGCGCCAGACGCAGTTGGAGGGCCTGGCGCAGGTGCGCCAGCTGGCCG
CCAAGCGCACGGCCATGCACGCCGAGCAGCGCGCGTTTGAGCACGTCAAG
TCGCAGCCGCCGTTCAGCACGGCCAGCCGCGACGGCGACGGTAGCGAGAG
CATCCGCAGCAGCGCGCCGAGCCGCCGTCGCGGCGGCGGCGGCGGCGGCG
GCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGCCCTGAGC
AGCAGTGAGCGCAGTGGCAGTGGCAGCAGGCGCGGCGCCCCGTCGCCGGC
GCCAGCAGCGGTGTGGCCAGGGCAGCCTGCGGGCTTGCCCACGGAGGCGT
GGTTTGACGCGCAGGGGCGCGCCATCACGCGCATGGCCATCAAGCTACGC
GCCGACGACCTGCCTCACACGTGTATCACCGGCTCCTCCCTAGCCCCGCT
CGTCAACCTGCGACGCATGTTACCCAGCCTCATCACCGAGAAAGCCAACC
ACAAACGTCAGAAGCCGCGCGATGGCCCCATGTGGCCCGCGCTCATCAGC
TCTGACGACTTTGGCGCCCTCTGGTTCAACACTACAGTGTTTGCGGTGGT
CATCCGTGTCGTCAACGACGGCGGAGACAACTACCTCGTGAGCTCACTTT
CGGCGCAAGCGGCGGAGTGGGTTAGCGAAGGCGAACGCTTAGTGCTGAGC
GATACGGCGAGGCTGGAGTGGCTCTTTGCGAGGATCTCGCAGTTCTTGGA
GCTCAAGCGGCCCGCAGAGCTCGCTGCTGATCTTGTTCGCTGGGTAGTGG
CGACAGGCTTTCCGCTGAAGCACTTTGTGCGCGAGTTCAGAACCGCAGCC
GCTGAGGTCATCAGCGCCGACTCCAGGCACGACAACTTCGTGCTGAGCGC
GCTCCTCGAGGTCTGCCGTCAGCAGTACTCCGCCACGGCGGCAGCCTGGA
CACACATCGCCGACGATCCGCAGTCGCACACCACGCGCGACCTCTTGGAG
GTCCTGCGCAGGCAAGCCGATCTTGCCATATACACAGCAGCCGCGCGAGA
GGACGACAGGGACATATACCCCCCAGACCTCAAGGCGTACGCGCATTGGT
CAGCGCCACACACCACCGACAGCGACAGCGCCTACGACTCAGACAGCAGC
CGCAGCCACGGCAGCGACAACTTCAACAGCGACATCGACGCCGACTACAG
CGATCACAGCACAACCGCGAGGCGCCAAGCGCAACAGCATCTGGCGCAGC
TGCGGGCGGTGAAGCGCACGGCGAGGAGTGTGACCCAGGATAGGGATGCG
GCCCTGCGCCAACCCTCGGCGTAG
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protein sequence of jgi.p|Trimin1|353455

>Trimin1|353455|estExt_Genemark1.C_Ctg_1640007 ID=Trimin1|353455|estExt_Genemark1.C_Ctg_1640007|Name=jgi.p|Trimin1|353455|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=825bp
MAQQDDNSSTGSCKGSPASAPEPFFDGTSEAQGCETPSSSAQGRPGMATR
GPSSDPSVPQGQHNDPYGALALSSACDNPYYGSLSSGRGGEMVDLAQQVK
SLLQPDIHEAIRRSRNLTAAAVGNLQEKFADYAHHVAEVQEGAYQQRREQ
QRRDTELSDALTSDLQALQTRLEEAERRAFEWADRAMAADERVAAADTHA
AALESRLAKVNSLPDDAAASPQQRRQLPYTPGSVYHSAAQQMLSAPRAEF
NEFNLRTFGGGAARRDDDERSRISMHSTRSLLRPTPAMLPPRPGSAPVRE
GDKGSLKDEARAQLDGAVRVARSQQLWTLTQTQARMDATQQLAAERAEHD
TKVAATEAALQREREILRMERKEVERSARANELLLRQTQLEGLAQVRQLA
AKRTAMHAEQRAFEHVKSQPPFSTASRDGDGSESIRSSAPSRRRGGGGGG
GGGGGGGGGGGGGGALSSSERSGSGSRRGAPSPAPAAVWPGQPAGLPTEA
WFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKAN
HKRQKPRDGPMWPALISSDDFGALWFNTTVFAVVIRVVNDGGDNYLVSSL
SAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVV
ATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAW
THIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAYAHW
SAPHTTDSDSAYDSDSSRSHGSDNFNSDIDADYSDHSTTARRQAQQHLAQ
LRAVKRTARSVTQDRDAALRQPSA*
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mRNA from alignment at Contig_164:88772..91513+

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_16488 ID=mRNA_16488|Name=jgi.p|Trimin1|353455|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2742bp|location=Sequence derived from alignment at Contig_164:88772..91513+ (Tribonema minus UTEX_B_3156 )
CGAACGGGGGGCATACCGATCGCGGACTCCGCTGCTGCGGCACCGCCTGC AGCAGCACCCAGCCGCCTAGCGGAGCCAAGTGCCGCTGTATCTCCTGCTA TGGCCCAGCAGGACGACAACAGCAGCACCGGCTCCTGCAAGGGCAGCCCC GCGTCAGCGCCAGAGCCATTCTTTGACGGCACGTCAGAAGCTCAAGGCTG CGAGACGCCATCGTCGTCTGCACAAGGGCGCCCCGGCATGGCCACCAGGG GACCCAGCAGCGACCCATCTGTCCCGCAGGGACAGCACAACGACCCATAC GGTGCCCTGGCGCTCTCCAGCGCCTGTGACAACCCCTACTACGGCTCCCT CTCTTCGGGAAGGGGGGGTGAGATGGTGGATCTCGCTCAGCAAGTCAAGT CTCTCCTGCAGCCGGACATCCATGAGGCCATCCGCCGCTCACGCAACCTC ACCGCAGCAGCCGTTGGGAACCTCCAGGAGAAGTTCGCCGACTACGCTCA CCACGTCGCGGAAGTGCAAGAGGGCGCCTACCAGCAGCGCCGCGAGCAGC AGCGCCGCGACACAGAGCTCTCCGACGCGCTCACAAGCGATCTGCAGGCA CTGCAGACTCGTCTGGAGGAGGCAGAGCGGCGCGCCTTCGAGTGGGCTGA CCGTGCCATGGCTGCGGACGAGCGCGTGGCAGCGGCCGACACGCACGCCG CCGCGCTGGAGTCGCGGCTGGTCGCAGAGGAGGCGCGCAGCGCTGACAAC TGATGGTCTACATCAACCGCCTTGAGGCCAAGGTCAACAGCCTCCCTGAC GACGCGGCCGCATCCCCTCAGCAGCGTCGCCAGCTCCCCTACACGCCCGG CTCTGTGTACCACTCAGCGGCGCAGCAGATGCTGTCGGCGCCGCGCGCTG AGTTCAACGAGTTTAACCTCCGCACGTTCGGCGGCGGCGCCGCACGCCGC GACGACGATGAGCGCTCGCGCATCAGCATGCACTCGACGCGCTCGCTGCT GCGCCCCACACCGGCCATGCTCCCTCCGCGCCCTGGCTCCGTCAACTACC CCGCCAACCTCCTCCGCCACCGCCACCGTCCGCGACGCCTCCGCGCGTCC CCCTGTGCCCCCTTTCTCCTTGAAGTTCTCTCCCGCTCTACCCCCCGCAA AGGCACCTGTGCGTGAGGGCGACAAAGGCAGCCTGAAGGATGAGGCGCGT GCGCAGCTGGACGGCGCTGTGCGCGTGGCCCGCAGCCAGCAGCTGTGGAC TCTCACACAGACGCAAGCGCGCATGGACGCCACGCAGCAGCTGGCGGCGG AGAGGGCCGAGCACGACACCAAGGTCGCAGCGACGGAGGCAGCGCTGCAA CGCGAGCGGGAGATCCTGCGCATGGAGCGCAAGGAGGTGGAGCGCAGCGC CCGCGCAAACGAGCTGTTGCTGCGCCAGACGCAGTTGGAGGGCCTGGCGC AGGTGCGCCAGCTGGCCGCCAAGCGCACGGCCATGCACGCCGAGCAGCGC GCGTTTGAGCACGTCAAGTCGCAGCCGCCGTTCAGCACGGCCAGCCGCGA CGGCGACGGTAGCGAGAGCATCCGCAGCAGCGCGCCGAGCCGCCGTCGCG GCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC GGCGGCGGCGCCCTGAGCAGCAGTGAGCGCAGTGGCAGTGGCAGCAGGCG CGGCGCCCCGTCGCCGGCGCCAGCAGCGGTGTGGCCAGGGCAGCCTGCGG GCTTGCCCACGGAGGCGTGGTTTGACGCGCAGGGGCGCGCCATCACGCGC ATGGCCATCAAGCTACGCGCCGACGACCTGCCTCACACGTGTATCACCGG CTCCTCCCTAGCCCCGCTCGTCAACCTGCGACGCATGTTACCCAGCCTCA TCACCGAGAAAGCCAACCACAAACGTCAGAAGCCGCGCGATGGCCCCATG TGGCCCGCGCTCATCAGCTCTGACGACTTTGGCGCCCTCTGGTTCAACAC TACAGTGTTTGCGGTGGTCATCCGTGTCGTCAACGACGGCGGAGACAACT ACCTCGTGAGCTCACTTTCGGCGCAAGCGGCGGAGTGGGTTAGCGAAGGC GAACGCTTAGTGCTGAGCGATACGGCGAGGCTGGAGTGGCTCTTTGCGAG GATCTCGCAGTTCTTGGAGCTCAAGCGGCCCGCAGAGCTCGCTGCTGATC TTGTTCGCTGGGTAGTGGCGACAGGCTTTCCGCTGAAGCACTTTGTGCGC GAGTTCAGAACCGCAGCCGCTGAGGTCATCAGCGCCGACTCCAGGCACGA CAACTTCGTGCTGAGCGCGCTCCTCGAGGTCTGCCGTCAGCAGTACTCCG CCACGGCGGCAGCCTGGACACACATCGCCGACGATCCGCAGTCGCACACC ACGCGCGACCTCTTGGAGGTCCTGCGCAGGCAAGCCGATCTTGCCATATA CACAGCAGCCGCGCGAGAGGACGACAGGGACATATACCCCCCAGACCTCA AGGCGTACGCGCATTGGTCAGCGCCACACACCACCGACAGCGACAGCGCC TACGACTCAGACAGCAGCCGCAGCCACGGCAGCGACAACTTCAACAGCGA CATCGACGCCGACTACAGCGATCACAGCACAACCGCGAGGCGCCAAGCGC AACAGCATCTGGCGCAGCTGCGGGCGGTGAAGCGCACGGCGAGGAGTGTG ACCCAGGATAGGGATGCGGCCCTGCGCCAACCCTCGGCGTAG
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Coding sequence (CDS) from alignment at Contig_164:88772..91513+

>mRNA_16488 ID=mRNA_16488|Name=jgi.p|Trimin1|353455|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2475bp|location=Sequence derived from alignment at Contig_164:88772..91513+ (Tribonema minus UTEX_B_3156 )
ATGGCCCAGCAGGACGACAACAGCAGCACCGGCTCCTGCAAGGGCAGCCC
CGCGTCAGCGCCAGAGCCATTCTTTGACGGCACGTCAGAAGCTCAAGGCT
GCGAGACGCCATCGTCGTCTGCACAAGGGCGCCCCGGCATGGCCACCAGG
GGACCCAGCAGCGACCCATCTGTCCCGCAGGGACAGCACAACGACCCATA
CGGTGCCCTGGCGCTCTCCAGCGCCTGTGACAACCCCTACTACGGCTCCC
TCTCTTCGGGAAGGGGGGGTGAGATGGTGGATCTCGCTCAGCAAGTCAAG
TCTCTCCTGCAGCCGGACATCCATGAGGCCATCCGCCGCTCACGCAACCT
CACCGCAGCAGCCGTTGGGAACCTCCAGGAGAAGTTCGCCGACTACGCTC
ACCACGTCGCGGAAGTGCAAGAGGGCGCCTACCAGCAGCGCCGCGAGCAG
CAGCGCCGCGACACAGAGCTCTCCGACGCGCTCACAAGCGATCTGCAGGC
ACTGCAGACTCGTCTGGAGGAGGCAGAGCGGCGCGCCTTCGAGTGGGCTG
ACCGTGCCATGGCTGCGGACGAGCGCGTGGCAGCGGCCGACACGCACGCC
GCCGCGCTGGAGTCGCGGCTGGCCAAGGTCAACAGCCTCCCTGACGACGC
GGCCGCATCCCCTCAGCAGCGTCGCCAGCTCCCCTACACGCCCGGCTCTG
TGTACCACTCAGCGGCGCAGCAGATGCTGTCGGCGCCGCGCGCTGAGTTC
AACGAGTTTAACCTCCGCACGTTCGGCGGCGGCGCCGCACGCCGCGACGA
CGATGAGCGCTCGCGCATCAGCATGCACTCGACGCGCTCGCTGCTGCGCC
CCACACCGGCCATGCTCCCTCCGCGCCCTGGCTCCGCACCTGTGCGTGAG
GGCGACAAAGGCAGCCTGAAGGATGAGGCGCGTGCGCAGCTGGACGGCGC
TGTGCGCGTGGCCCGCAGCCAGCAGCTGTGGACTCTCACACAGACGCAAG
CGCGCATGGACGCCACGCAGCAGCTGGCGGCGGAGAGGGCCGAGCACGAC
ACCAAGGTCGCAGCGACGGAGGCAGCGCTGCAACGCGAGCGGGAGATCCT
GCGCATGGAGCGCAAGGAGGTGGAGCGCAGCGCCCGCGCAAACGAGCTGT
TGCTGCGCCAGACGCAGTTGGAGGGCCTGGCGCAGGTGCGCCAGCTGGCC
GCCAAGCGCACGGCCATGCACGCCGAGCAGCGCGCGTTTGAGCACGTCAA
GTCGCAGCCGCCGTTCAGCACGGCCAGCCGCGACGGCGACGGTAGCGAGA
GCATCCGCAGCAGCGCGCCGAGCCGCCGTCGCGGCGGCGGCGGCGGCGGC
GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGCCCTGAG
CAGCAGTGAGCGCAGTGGCAGTGGCAGCAGGCGCGGCGCCCCGTCGCCGG
CGCCAGCAGCGGTGTGGCCAGGGCAGCCTGCGGGCTTGCCCACGGAGGCG
TGGTTTGACGCGCAGGGGCGCGCCATCACGCGCATGGCCATCAAGCTACG
CGCCGACGACCTGCCTCACACGTGTATCACCGGCTCCTCCCTAGCCCCGC
TCGTCAACCTGCGACGCATGTTACCCAGCCTCATCACCGAGAAAGCCAAC
CACAAACGTCAGAAGCCGCGCGATGGCCCCATGTGGCCCGCGCTCATCAG
CTCTGACGACTTTGGCGCCCTCTGGTTCAACACTACAGTGTTTGCGGTGG
TCATCCGTGTCGTCAACGACGGCGGAGACAACTACCTCGTGAGCTCACTT
TCGGCGCAAGCGGCGGAGTGGGTTAGCGAAGGCGAACGCTTAGTGCTGAG
CGATACGGCGAGGCTGGAGTGGCTCTTTGCGAGGATCTCGCAGTTCTTGG
AGCTCAAGCGGCCCGCAGAGCTCGCTGCTGATCTTGTTCGCTGGGTAGTG
GCGACAGGCTTTCCGCTGAAGCACTTTGTGCGCGAGTTCAGAACCGCAGC
CGCTGAGGTCATCAGCGCCGACTCCAGGCACGACAACTTCGTGCTGAGCG
CGCTCCTCGAGGTCTGCCGTCAGCAGTACTCCGCCACGGCGGCAGCCTGG
ACACACATCGCCGACGATCCGCAGTCGCACACCACGCGCGACCTCTTGGA
GGTCCTGCGCAGGCAAGCCGATCTTGCCATATACACAGCAGCCGCGCGAG
AGGACGACAGGGACATATACCCCCCAGACCTCAAGGCGTACGCGCATTGG
TCAGCGCCACACACCACCGACAGCGACAGCGCCTACGACTCAGACAGCAG
CCGCAGCCACGGCAGCGACAACTTCAACAGCGACATCGACGCCGACTACA
GCGATCACAGCACAACCGCGAGGCGCCAAGCGCAACAGCATCTGGCGCAG
CTGCGGGCGGTGAAGCGCACGGCGAGGAGTGTGACCCAGGATAGGGATGC
GGCCCTGCGCCAACCCTCGGCGTAG
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