Trimin1|353391|estExt_Genemark1.C_Ctg_1610005 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|353391
Unique Name	Trimin1\|353391\|estExt_Genemark1.C_Ctg_1610005
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	356

Homology

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BLAST of jgi.p|Trimin1|353391 vs. uniprot
Match: A0A836CM22_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM22_9STRA)

HSP 1 Score: 713 bits (1840), Expect = 1.170e-259
Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0

Query:    1 MFLGDQMLARCAPPSATSPGRRVSTTGPSAAEDEALQRLCGLRDPFAAMAYRDPLSNRKPHACHRRYLLLTAGERHQREMKVQQRLTQCADTPFTVSVRSGAITDVFYTRPGLGLPPKMESLEQRARLWATHRAPPTRIPTADNANWVPANDLVEPHARSEDADEAISTAFFAHDYHRPLMRRALDDARSGQILKVHVSQQPQAYVQQLYHGNLDGDSDAAPLYNHALWETDLVVGANPDGALITMERISASNIRGRHGWVRIRVPIGAVWGRAAEGLLKRLLQKVLDIRQAALHRFISTEQKTELEQLTVEHCTAIATNFPKKARRRLLNNLAADNLLAAVEREHGGGGTCSRA 355
            MFLGDQMLARCAPPSATSPGRRVSTTGPSAAEDEALQRLCGLRDPFAAMAYRDPLSNRKPHACHRRYLLLTAGERHQREMKVQQRLTQCADTPFTVSVRSGAITDVFYTRPGLGLPPKMESLEQRARLWATHRAPPTRIPTADNANWVPANDLVEPHARSEDADEAISTAFFAHDYHRPLMRRALDDARSGQILKVHVSQQPQAYVQQLYHGNLDGDSDAAPLYNHALWETDLVVGANPDGALITMERISASNIRGRHGWVRIRVPIGAVWGRAAEGLLKRLLQKVLDIRQAALHRFISTEQKTELEQLTVEHCTAIATNFPKKARRRLLNNLAADNLLAAVEREHGGGGTCSRA
Sbjct:    1 MFLGDQMLARCAPPSATSPGRRVSTTGPSAAEDEALQRLCGLRDPFAAMAYRDPLSNRKPHACHRRYLLLTAGERHQREMKVQQRLTQCADTPFTVSVRSGAITDVFYTRPGLGLPPKMESLEQRARLWATHRAPPTRIPTADNANWVPANDLVEPHARSEDADEAISTAFFAHDYHRPLMRRALDDARSGQILKVHVSQQPQAYVQQLYHGNLDGDSDAAPLYNHALWETDLVVGANPDGALITMERISASNIRGRHGWVRIRVPIGAVWGRAAEGLLKRLLQKVLDIRQAALHRFISTEQKTELEQLTVEHCTAIATNFPKKARRRLLNNLAADNLLAAVEREHGGGGTCSRA 355

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353391 vs. uniprot

BLAST of jgi.p|Trimin1|353391 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CM22_9STRA	1.170e-259	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_161	contig	Contig_161:24854..31654 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353391	mRNA_13098	Tribonema minus UTEX_B_3156	mRNA	Contig_161 24485..31654 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|353391|estExt_Genemark1.C_Ctg_1610005 ID=Trimin1|353391|estExt_Genemark1.C_Ctg_1610005|Name=jgi.p|Trimin1|353391|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=356bp
MFLGDQMLARCAPPSATSPGRRVSTTGPSAAEDEALQRLCGLRDPFAAMA
YRDPLSNRKPHACHRRYLLLTAGERHQREMKVQQRLTQCADTPFTVSVRS
GAITDVFYTRPGLGLPPKMESLEQRARLWATHRAPPTRIPTADNANWVPA
NDLVEPHARSEDADEAISTAFFAHDYHRPLMRRALDDARSGQILKVHVSQ
QPQAYVQQLYHGNLDGDSDAAPLYNHALWETDLVVGANPDGALITMERIS
ASNIRGRHGWVRIRVPIGAVWGRAAEGLLKRLLQKVLDIRQAALHRFIST
EQKTELEQLTVEHCTAIATNFPKKARRRLLNNLAADNLLAAVEREHGGGG
TCSRA*