mRNA_16095 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|353383 vs. uniprot
Match: A0A835Z8H8_9STRA (Rab-GTPase-TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H8_9STRA) HSP 1 Score: 1271 bits (3288), Expect = 0.000e+0 Identity = 666/666 (100.00%), Postives = 666/666 (100.00%), Query Frame = 1
Query: 1 MAEEEELREQQALDTRAAAANLESIPEAKAAHLVAACVAVVQGVADSGTEPDGRESSGNSVTASAQGAVADNTGAAAADQPRAAPAADASHLPEGGSALTAAAAAALHQQPTALAPAINPRDAGVHDRSHGCVDAGTAPLRAAPSEDELFRGVWRLDSASQSAGRLLSEELHELGADAGRAVGSDAAALSRYGGASGCVVVTPIGHGGFVATLGGAAAAADARAVALGDSGGAPYGAARAVIMDEAPAGADDEGWVFISTRGIVSPLGQSSGATAFEASQRLTWQASEGGGALGSGGGGAAPMLGAAGAERAFSKTDRYGIFVTSERAASPRVGAPAQAVKAKDDERSHKWLTMREHWDALVGKKGGEKLLKKRARKGIPDTVRGEMWQLLCGSKTLMAAHPGVYDALVASHVQVDGPIEEDIPRTMFDHEMFCNHSHFEGHGKLRRVLLAFGRRDREGINYIAALFLLYMTEEEAFWLLQKDEAGHQQLVEGQQPEKVEEGMDDQEKQQENLYRLLVTGLVFLLRFVFHYVMDGLALKFTPRLHNHLKSNDIDPTMYAHPWFMTCFTQSFPYDLVTRVWDIFLKEDWKIMYRVCLALFKSVEDEVCALDLERANMVLRKLPAAADASVIMDLALRIPLKHKHIEKRVAKFYEQLNAPAAATTTAR 1998
MAEEEELREQQALDTRAAAANLESIPEAKAAHLVAACVAVVQGVADSGTEPDGRESSGNSVTASAQGAVADNTGAAAADQPRAAPAADASHLPEGGSALTAAAAAALHQQPTALAPAINPRDAGVHDRSHGCVDAGTAPLRAAPSEDELFRGVWRLDSASQSAGRLLSEELHELGADAGRAVGSDAAALSRYGGASGCVVVTPIGHGGFVATLGGAAAAADARAVALGDSGGAPYGAARAVIMDEAPAGADDEGWVFISTRGIVSPLGQSSGATAFEASQRLTWQASEGGGALGSGGGGAAPMLGAAGAERAFSKTDRYGIFVTSERAASPRVGAPAQAVKAKDDERSHKWLTMREHWDALVGKKGGEKLLKKRARKGIPDTVRGEMWQLLCGSKTLMAAHPGVYDALVASHVQVDGPIEEDIPRTMFDHEMFCNHSHFEGHGKLRRVLLAFGRRDREGINYIAALFLLYMTEEEAFWLLQKDEAGHQQLVEGQQPEKVEEGMDDQEKQQENLYRLLVTGLVFLLRFVFHYVMDGLALKFTPRLHNHLKSNDIDPTMYAHPWFMTCFTQSFPYDLVTRVWDIFLKEDWKIMYRVCLALFKSVEDEVCALDLERANMVLRKLPAAADASVIMDLALRIPLKHKHIEKRVAKFYEQLNAPAAATTTAR
Sbjct: 1 MAEEEELREQQALDTRAAAANLESIPEAKAAHLVAACVAVVQGVADSGTEPDGRESSGNSVTASAQGAVADNTGAAAADQPRAAPAADASHLPEGGSALTAAAAAALHQQPTALAPAINPRDAGVHDRSHGCVDAGTAPLRAAPSEDELFRGVWRLDSASQSAGRLLSEELHELGADAGRAVGSDAAALSRYGGASGCVVVTPIGHGGFVATLGGAAAAADARAVALGDSGGAPYGAARAVIMDEAPAGADDEGWVFISTRGIVSPLGQSSGATAFEASQRLTWQASEGGGALGSGGGGAAPMLGAAGAERAFSKTDRYGIFVTSERAASPRVGAPAQAVKAKDDERSHKWLTMREHWDALVGKKGGEKLLKKRARKGIPDTVRGEMWQLLCGSKTLMAAHPGVYDALVASHVQVDGPIEEDIPRTMFDHEMFCNHSHFEGHGKLRRVLLAFGRRDREGINYIAALFLLYMTEEEAFWLLQKDEAGHQQLVEGQQPEKVEEGMDDQEKQQENLYRLLVTGLVFLLRFVFHYVMDGLALKFTPRLHNHLKSNDIDPTMYAHPWFMTCFTQSFPYDLVTRVWDIFLKEDWKIMYRVCLALFKSVEDEVCALDLERANMVLRKLPAAADASVIMDLALRIPLKHKHIEKRVAKFYEQLNAPAAATTTAR 666
BLAST of jgi.p|Trimin1|353383 vs. uniprot
Match: A0A835YV67_9STRA (Rab-GTPase-TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV67_9STRA) HSP 1 Score: 397 bits (1021), Expect = 1.070e-125 Identity = 206/384 (53.65%), Postives = 253/384 (65.89%), Query Frame = 1
Query: 943 KTDRYGIFVTSERAASPRVGAPAQAVKAKDDERSHKWLTMREHWDALVGKKGGEKLLKKRARKGIPDTVRGEMWQLLCGSKTLMAAHPGVYDALVASHVQVDGPIEEDIPRTMFDHEMFCNHSHFEGHGKLRRVLLAFGRRDRE--------------------------------GINYIAALFLLYMTEEEAFWLLQKDEAGHQQLVEGQQPEKVEEGMDDQEKQQENLYRLLVTGLVFLLRFVFHYVMDGLALKFTPRLHNHLKSNDIDPTMYAHPWFMTCFTQSFPYDLVTRVWDIFLKEDWKIMYRVCLALFKSVEDEVCALDLERANMVLRKLPAAADASVIMDLALRIPLKHKHIEKRVAKFYEQLNAPAAATTTAR 1998
KTD +G F+TS+RAA GA A A +K++ R+ KWL MR WD + ++ G++ LK+RARKGIPDTVRGE+WQLL GSK MAA GVY+ LVAS ++VDGPIEEDIPRTMFDHEMFC SH GH KLRRVLLA+GR DRE GINYIAALFLLYM EEEAFW+L + + Q L L + G++ F ++VMD L KF P+L HL+ +DI PTMYAHPWF+TCFTQ+FPY+L TR WD+FL+EDWKIMYRVCLALFK VE EVC+LDLE+ N+V+R+LPAAAD I+DLA+RIPLKHKHI KR+ +F+ + AA+ +R
Sbjct: 290 KTDHFGFFLTSDRAAPVAQGAAATAALSKEESRARKWLEMRRQWDTVAARRHGQRALKRRARKGIPDTVRGEVWQLLSGSKARMAASAGVYEGLVASDLKVDGPIEEDIPRTMFDHEMFCKQSHMHGHSKLRRVLLAYGRHDREVQYCQWQPLLYYFKNFKKYNLSKLHKRQVAQTGINYIAALFLLYMPEEEAFWML----------------------VCVMHRPQAPLRELFLPGMLKAREF--NHVMDSLTEKFVPKLFRHLQKHDIQPTMYAHPWFITCFTQAFPYELCTRTWDVFLEEDWKIMYRVCLALFKHVETEVCSLDLEQGNLVMRRLPAAADGKTILDLAMRIPLKHKHIAKRIRQFHAKTVTDKAASRLSR 649
BLAST of jgi.p|Trimin1|353383 vs. uniprot
Match: A0A6H5L2H2_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H2_9PHAE) HSP 1 Score: 304 bits (779), Expect = 6.830e-90 Identity = 172/360 (47.78%), Postives = 220/360 (61.11%), Query Frame = 1
Query: 943 KTDRYGIFVTSERAASPRVGAPAQAVK---AKDDERSHKWLTMREHWDAL-VGKKGGEKLLKKRARKGIPDTVRGEMWQLLCGSKTLMAAHPGVYDALVASHVQVDGPIEEDIPRTMFDHEMFCNHSHFEGHGKLRRVLLAFGRRDRE-----GINYIAALFLLYMTEEEAFWLLQKDEAGHQQLVEGQQPEKVEEGMDDQEKQQENLYRLLVTGLVFLLRFVFHYVMDGLALKFTPRLHNHLKSNDIDPTMYAHPWFMTCFTQSFPYDLVTRVWDIFLKEDWKIMYRVCLALFKSVEDEVCALDLERANMVLRKLPAAADASVIMDLALRIPLKHKHIEKRVAKFYE---QLNAPAAAT 1986
KTDRYG FVTSER R+ P + ++ +K+ R+ KW M +++D+ +GKK + R RKG+PD VRG++WQ+L GS +M P Y LVAS + V+GPIEEDIPRTM+DHE+FC S G LRRVL A+GR DRE GINYI +LFLLYM EE AFW+L + + L L + G++ F F VMD L K +L N + ++++ P MYA WF+T FTQ FPYDLVTRVWD+FL EDWK+ YRVCLALFKSVE + ALDLE N++LR +P DA I+D+A IPLKH+HI KRVA F + + N PA T
Sbjct: 335 KTDRYGFFVTSERR---RLDVPMEILRVRWSKEGRRAQKWRKMIDNFDSWRMGKKATR--FRNRVRKGVPDCVRGKVWQMLMGSTAMMEREPNKYADLVASDLPVEGPIEEDIPRTMYDHELFCRKSRVNGRDMLRRVLTAYGRYDREVQYCQGINYITSLFLLYMPEENAFWML----------------------VASMNRPCAPLRELFLPGMLKAQEFQF--VMDSLTKKHCEKLSNQILAHNLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFKSVEGKAAALDLENLNLLLRNMPPNVDAQQILDIAASIPLKHRHIAKRVALFSDFNARKNTPARGT 665
BLAST of jgi.p|Trimin1|353383 vs. uniprot
Match: D7G5V3_ECTSI (GTPase activating protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5V3_ECTSI) HSP 1 Score: 285 bits (730), Expect = 3.350e-87 Identity = 154/316 (48.73%), Postives = 197/316 (62.34%), Query Frame = 1
Query: 1024 AKDDERSHKWLTMREHWDAL-VGKKGGEKLLKKRARKGIPDTVRGEMWQLLCGSKTLMAAHPGVYDALVASHVQVDGPIEEDIPRTMFDHEMFCNHSHFEGHGKLRRVLLAFGRRDRE-----GINYIAALFLLYMTEEEAFWLLQKDEAGHQQLVEGQQPEKVEEGMDDQEKQQENLYRLLVTGLVFLLRFVFHYVMDGLALKFTPRLHNHLKSNDIDPTMYAHPWFMTCFTQSFPYDLVTRVWDIFLKEDWKIMYRVCLALFKSVEDEVCALDLERANMVLRKLPAAADASVIMDLALRIPLKHKHIEKRVAKF 1953
+K+D R+ KW TM +++D+ +GKK + R RKG+PD VR ++WQ+L GS +M P Y LVAS + V+GPIEEDIPRTM+DHE+FC S G LRRVL A+GR DRE G+NYI +LFLLYM EE AFW+L + + L L + G++ F F VMD L K +L N + ++++ P MYA WF+T FTQ FPYDLVTRVWD+FL EDWK+ YRVCLALFKSVE + ALDLE N++LR +P DA I+D+A IPLKH+HI KRVA F
Sbjct: 9 SKEDRRAQKWRTMIDNFDSWRMGKKATR--FRNRVRKGVPDCVRAKVWQMLMGSTAMMEREPNKYADLVASDLPVEGPIEEDIPRTMYDHELFCRKSRVNGRDMLRRVLTAYGRYDREVQYCQGVNYITSLFLLYMPEENAFWML----------------------VATMNRPCAPLRELFLPGMLKAQEFQF--VMDSLTKKHCEKLSNQILAHNLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFKSVEGKAAALDLENLNLLLRNMPPNVDAQQILDIAASIPLKHRHIGKRVALF 298
BLAST of jgi.p|Trimin1|353383 vs. uniprot
Match: A0A7S1UGQ0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGQ0_9STRA) HSP 1 Score: 184 bits (467), Expect = 3.130e-48 Identity = 125/349 (35.82%), Postives = 183/349 (52.44%), Query Frame = 1
Query: 943 KTDRYGIFVTSERAASPRVGAPAQAVKA--KDDERSHKWLTMREHWDALVGKKGGEKLLKKRARKGIPDTVRGEMWQLLCGSKTLMAAHPGVYDALVASHV-------QVDGPIEEDIPRTMFDHEMFCNHSHFEGHGKLRRVLLAFGRRDRE-----GINYIAALFLLYMTEEEAFWLLQKDEAGHQQLVEGQQPEKVEEGMDDQEKQQENLYRLLVTGLVFLLRFVFHYVMDGLALKFTPRLHNHLKSNDIDPTMYAHPWFMTCFTQSFPYDLVTRVWDIFLKEDWKIMYRVCLALFKSVEDEVCALDLERA-NMVLRKLPAAADASVIMDLALRIPLKHKHIEKRV 1944
KTDRYG ++ S++ R PA+ + K+++R+ KWL M WDA K G+ LK R RKGIPD++RG +W + AA+P +Y LVA + IE DI RT H++F H+ G LRRVL ++ D E G+ +I A+FL Y+TEE+AF+LL + ++ + +L L + G+ ++ V D L PRLH + IDP+M+A WF+T FT SFP+DLVTRVWD FL E WK++YRV LAL + E +V ++ E+ + + KLP D IM LA R+ + + I++ +
Sbjct: 29 KTDRYGFYM-SDKVHRSRELEPAEKARRMKKEEQRTKKWLRMLSEWDAFERK--GK--LKARIRKGIPDSLRGRVWCRIVDIPGYRAAYPNLYTELVALQAGAGVEPTDIYQTIERDINRTFPRHQLFGRHNPM-GQNMLRRVLHSYSLYDEELGYCQGMGFITAMFLSYITEEDAFYLLVR-------VI---------------NRPGSHLRGLFIQGMPMVI--VILRTFDALLRVVLPRLHAKFQREGIDPSMFATEWFITVFTASFPFDLVTRVWDCFLYEGWKVVYRVALALLQKHEAQVLRMEFEQILDHLKHKLPREVDGEEIMRLAARVRITRRMIQQHL 347
BLAST of jgi.p|Trimin1|353383 vs. uniprot
Match: A0A3F2RLQ9_9STRA (Rab-GAP TBC domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RLQ9_9STRA) HSP 1 Score: 176 bits (447), Expect = 2.440e-45 Identity = 119/348 (34.20%), Postives = 179/348 (51.44%), Query Frame = 1
Query: 949 DRYGIFVTSER--AASPRVGAPAQAVKAKDDERSHKWLTM----REHWDALVGKKGGEKLLKKRARKGIPDTVRGEMWQLLCGSKTLMAAHPGVYDALV-ASHVQVDGPIEEDIPRTMFDHEMFCNHSHFEGHGKLRRVLLAFGRRDRE-----GINYIAALFLLYMTEEEAFWLLQKDEAGHQQLVEGQQPEKVEEGMDDQEKQQENLYRLLVTGLVFLLRFVFHYVMDGLALKFTPRLHNHLKSNDIDPTMYAHPWFMTCFTQSFPYDLVTRVWDIFLKEDWKIMYRVCLALFKSVEDEVCALDLERANMVLRKLPAAADASVIMDLALRIPLKHKHIEKRVAKFY 1956
DRYG VT +R G AV ++ R+ KW+ M E W+ ++ LKKR RKGIP+ +RG +W L GS ++ +PGVY L+ SHV + I DI RT H +F + S G L VL A+ D E G+ +++A+FL YM E++AFWLL H++ G+ D LYR + + + +V +GL + P+L HL++ + PTMY WF+T FT +FP++ VTRVWD FL E WKI++RV LAL K+ + + + E R+LP DA ++ +A R+ +K + IE + +++
Sbjct: 66 DRYGFLVTDKRFNRGHTAAGTYKHAVWL-ENRRTQKWVKMIGKQLEDWEVCQLRQAVT--LKKRVRKGIPEALRGRVWSHLAGSSQMLLNNPGVYHQLLQTSHVPCEETIARDIGRTFPRHSLFRDRSSL-GQCALMNVLKAYSLHDPEVGYCQGMGFLSAMFLCYMPEQQAFWLLVAC-LNHKRY-----------GLAD-------LYRPRMPKVPEVT-----FVFEGLFKQLMPQLSAHLENEGLHPTMYLTQWFLTLFTYNFPFEFVTRVWDAFLHEGWKIIFRVALALLKTSQKTLLSSKFEAIMEYFRELPNRVDAEEVLAVAFRVSIKREQIENLLEQYH 385
BLAST of jgi.p|Trimin1|353383 vs. uniprot
Match: A0A6G0XPR2_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPR2_9STRA) HSP 1 Score: 172 bits (435), Expect = 8.270e-44 Identity = 121/349 (34.67%), Postives = 180/349 (51.58%), Query Frame = 1
Query: 940 SKTDRYGIFVTSERAASPR---VGAPAQAVKAK---DDERSHKWLTMR-----EHWDALVGKKGGEKLLKKRARKGIPDTVRGEMWQLLCGSKTLMAAHPGVYDALVAS-HVQVDGPIEEDIPRTMFDHEMFCNHSHFEGHGKLRRVLLAFGRRDR-----EGINYIAALFLLYMTEEEAFWLLQKDEAGHQQLVEGQQPEKVEEGMDDQEKQQENLYRLLVTGLVFLLRFVFHYVMDGLALKFTPRLHNHLKSNDIDPTMYAHPWFMTCFTQSFPYDLVTRVWDIFLKEDWKIMYRVCLALFKSVEDEVCALDLERANMVLRKLPAAADASVIMDLALRIPLKHKHIE 1935
S DRYG F+ S++ SP+ V +P++ K ++ R+ KW++M E W+ K+ + LK R RKGIPD +RG W L GS +M +PG+Y LVA+ V + I DI RT H +F + + G L VL A+ D +G+ +I+ALFL YM EE+ FW LV +K GM D +YR + +V ++ + D + P+L HL + + PTMYA WF+T F SFP+D VTRVWDIFL E WKI++RV +AL K E ++ L E+ R +P + D ++ A+ IP+ ++ ++
Sbjct: 44 SPVDRYG-FLVSDKRYSPQARQVKSPSETPKDSVWLENRRTQKWMSMTGGISIEDWERTKQKQPAK--LKSRVRKGIPDAIRGIAWPHLAGSSLMMKNNPGMYRDLVATTQVPCEDTILRDIGRTFPKHHLFKDSTSI-GQSALLNVLKAYSVYDPNVGYCQGMGFISALFLSYMPEEQTFW----------HLVACLNHKKY--GMAD-------IYRPGMPRVVEIMA-----IFDQCLKIYVPKLAEHLDAEGLHPTMYATQWFVTIFAYSFPFDFVTRVWDIFLHEGWKIVFRVTVALLKVNERKLMTLKFEKIMEFFRDMPPSVDTDEVVATAVNIPMTNRQLQ 364
BLAST of jgi.p|Trimin1|353383 vs. uniprot
Match: A0A0P1B616_PLAHL (Plant adhesion molecule 1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B616_PLAHL) HSP 1 Score: 171 bits (432), Expect = 1.580e-43 Identity = 120/355 (33.80%), Postives = 177/355 (49.86%), Query Frame = 1
Query: 940 SKTDRYGIFVTSERAA-SPRVGAPAQAVKAKDDERSHKWLTM----REHWDALVGKKGGEKLLKKRARKGIPDTVRGEMWQLLCGSKTLMAAHPGVYDALVAS-HVQVDGPIEEDIPRTMFDHEMFCNHSHFEGHGKLRRVLLAFGRRDRE-----GINYIAALFLLYMTEEEAFWLLQKDEAGHQQLVEGQQPEKVEEGMDDQEKQQENLYRLLVTGLVFLLRFVFHYVMDGLALKFTPRLHNHLKSNDIDPTMYAHPWFMTCFTQSFPYDLVTRVWDIFLKEDWKIMYRVCLALFKSVEDEVCALDLERANMVLRKLPAAADASVIMDLALRIPLKHKHIEKRVAKFYEQLNA 1971
S DRYG VT +R S + A + ++ R+ KWL M E W+ + +LKKR RKGIP+ +RG +W L GS +++ + G+Y LV + V + I DI RT H +F + S G L +L A+ D E G+ +I+A+FL YM E++AFWLL H++ G+ D LYR + ++ + YV GL + P L HL++ + PTMY WF+T FT +FP+DLVTRVWD FL E WK++YRV LAL K + + E R LP D ++ +A R+P+K I + + +++ A
Sbjct: 40 SPVDRYGFLVTDKRFHDSHHIYKHAVWL---ENRRTQKWLKMIGKQLEDWEICRFRHAA--ILKKRIRKGIPEALRGRVWSYLAGSSQMLSNNSGIYHQLVQTIGVPCEETIARDIGRTFPKHTLFRDRSSL-GQCALMNMLKAYSLHDPEVGYCQGMGFISAMFLCYMPEQQAFWLLVAC-LNHKRY-----------GLAD-------LYRPRMPKVLEVT-----YVFQGLLKQQMPHLSTHLENEGLHPTMYLTQWFLTLFTYNFPFDLVTRVWDAFLHEGWKVIYRVALALMKISQKILMNSKFESIMEYFRDLPNKVDTDDVLAIAYRMPIKRAQISQLMDEYFSSCEA 364
BLAST of jgi.p|Trimin1|353383 vs. uniprot
Match: A0A067CMH2_SAPPC (Rab-GAP TBC domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CMH2_SAPPC) HSP 1 Score: 169 bits (427), Expect = 7.760e-43 Identity = 113/347 (32.56%), Postives = 173/347 (49.86%), Query Frame = 1
Query: 949 DRYGIFVTSERAASPRVGAPAQAVKAK------DDERSHKWLTMR-----EHWDALVGKKGGEKLLKKRARKGIPDTVRGEMWQLLCGSKTLMAAHPGVY-DALVASHVQVDGPIEEDIPRTMFDHEMFCNHSHFEGHGKLRRVLLAFGRRDRE-----GINYIAALFLLYMTEEEAFWLLQKDEAGHQQLVEGQQPEKVEEGMDDQEKQQENLYRLLVTGLVFLLRFVFHYVMDGLALKFTPRLHNHLKSNDIDPTMYAHPWFMTCFTQSFPYDLVTRVWDIFLKEDWKIMYRVCLALFKSVEDEVCALDLERANMVLRKLPAAADASVIMDLALRIPLKHKHIEK 1938
DRYG F+ S++ A+ + P A + ++ R+ KW+ M + W ++ + + LK R RKGIP+ +RG W L G+ +M HPG+Y D L +H+ + I DI RT H +F + G G L +L A+ D + G+ +I+ALFL YM EE FW QLV +K G+ D +YR + +V ++ + D + P+L H+ + + PTMYA WF+T F SFP++ VTRVWDIFL E WKI+YRV +AL K E + E+ ++LP + D ++D A IP+ +++
Sbjct: 35 DRYG-FLVSDKHATCHLYIPTAAKRKNLDASWLENHRTQKWIAMTGKCTYDEWQSVKLRHSAK--LKSRIRKGIPEALRGLAWPHLSGASMMMQNHPGMYRDLLATAHIPCEETISRDIGRTFPKHHLFKDAQSI-GQGALMNILKAYSVYDPDVGYCQGMGFISALFLSYMPEEHTFW----------QLVAVLNQKKF--GLAD-------MYRPGMPRVVEIIA-----IFDACIRLYLPKLGTHMDNEGLHPTMYATQWFVTIFAYSFPFEFVTRVWDIFLHEGWKIVYRVAIALLKISEKALLGKKFEKIMEFFKELPTSVDVKQLLDTAWDIPMTTAQLQQ 353
BLAST of jgi.p|Trimin1|353383 vs. uniprot
Match: A0A196S7X3_BLAHN (Rab-like GTPase activating protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S7X3_BLAHN) HSP 1 Score: 167 bits (424), Expect = 1.150e-42 Identity = 120/354 (33.90%), Postives = 173/354 (48.87%), Query Frame = 1
Query: 943 KTDRYGIFVTSERAASPRVGAPAQAVKAKDDERSHKWLTMREHWDALVGKKGGEKLLKKRARKGIPDTVRGEMWQLL-----------CGSKTLMAAHPGVYDALVASHVQVDGPIEEDIPRTMFDHEMFCNHSHFE----GHGKLRRVLLAFGRRDRE-----GINYIAALFLLYMTEEEAFWLLQKDEAGHQQLVEGQQPEKVEEGMDDQEKQQENLYRLLVTGLVFLLRFVFHYVMDGLALKFTPRLHNHLKSNDIDPTMYAHPWFMTCFTQSFPYDLVTRVWDIFLKEDWKIMYRVCLALFKSVEDEVCALDLERANMVL---RKLPAAADASVIMDLALRIPLKHKHIE 1935
K DR+G + PA VK +++R HKWL M ++W+ K +LK+R RKGIPD VRG +W + CG + L+++HP + + + G I+ DI RT + NH +E G L+RVL AF D+E G+NYI + L YMTEEE++W L QL+E P + + + + ++ T HY M L K+ P L ++L I P MY WFM +T+SFPYD+V RVWDIFL E W I+Y+V LAL + + ++ D E A V+ + P A VI+D ALR + + +E
Sbjct: 14 KVDRFGFYEEDTGR------KPAFDVKL-ENQRLHKWLFMLKNWEKFC--KESPDVLKRRVRKGIPDAVRGRVWSIFLSADVCSDIYHCGYENLLSSHPTLEEN---EFTRKGGVIDRDINRT------YPNHEDYEESGMGQDTLKRVLFAFADHDKEVKYTQGMNYIVGVLLNYMTEEESYWALC-------QLMENS-PFLMSKWFNQE-------LTMVHTS---------HYQMSKLLAKYIPELDSYLTELSITPAMYCTEWFMCVYTRSFPYDVVVRVWDIFLSEGWVIVYQVALALLELFKKDILGKDFEDAYAVISGINRSPDLPSADVIIDTALRFNVTAEELE 325 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353383 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_16095 ID=mRNA_16095|Name=jgi.p|Trimin1|353383|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2149bp|location=Sequence derived from alignment at Contig_160:51067..63712+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCTGAAGAAGAGGAGCTGCGAGAGCAGCAGGCCCTGGACACCAGAGCback to top protein sequence of jgi.p|Trimin1|353383 >Trimin1|353383|estExt_Genemark1.C_Ctg_1600010 ID=Trimin1|353383|estExt_Genemark1.C_Ctg_1600010|Name=jgi.p|Trimin1|353383|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=667bp MAEEEELREQQALDTRAAAANLESIPEAKAAHLVAACVAVVQGVADSGTEback to top mRNA from alignment at Contig_160:51067..63712+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_16095 ID=mRNA_16095|Name=jgi.p|Trimin1|353383|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=12646bp|location=Sequence derived from alignment at Contig_160:51067..63712+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_160:51067..63712+ >mRNA_16095 ID=mRNA_16095|Name=jgi.p|Trimin1|353383|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2001bp|location=Sequence derived from alignment at Contig_160:51067..63712+ (Tribonema minus UTEX_B_3156 )back to top |