Trimin1|347880|estExt_Genemark1.C_Ctg_160188 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347880
Unique NameTrimin1|347880|estExt_Genemark1.C_Ctg_160188
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length357
Homology
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BLAST of jgi.p|Trimin1|347880 vs. uniprot
Match: A0A836CKH2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKH2_9STRA)

HSP 1 Score: 672 bits (1733), Expect = 2.570e-243
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0 
Query:    1 MPREAWDLSKSVRAESRPRVVFELREDEESEAAYCRALTSKRIVALTLRDGAPLPSPLPARGVLRQLVLTDGCAEGRPAPPLEALGALAAPLDLLSLFCCCDAAWAHAALARLPPRGFAVGTLEVSATSFPEGALRGFAGSAETLRAARRGVRGGVDDAQGLDLDGVRARRVELRGALYPARLPRRARELTAELAPVLTPADEWRGALSLRRLRFVGCRFPASLALPPGLESLTVVRSGETTEAYWYGPTWREGLELRLVASDADGGGTALPPALSLTVRGYRVVDAPPALLARWGAEGRDRWDLVDLTGSDGGDDAVESESXXXXXXXXXXXGRAVGEPEHAAGGGLTDDEAQGW 356
            MPREAWDLSKSVRAESRPRVVFELREDEESEAAYCRALTSKRIVALTLRDGAPLPSPLPARGVLRQLVLTDGCAEGRPAPPLEALGALAAPLDLLSLFCCCDAAWAHAALARLPPRGFAVGTLEVSATSFPEGALRGFAGSAETLRAARRGVRGGVDDAQGLDLDGVRARRVELRGALYPARLPRRARELTAELAPVLTPADEWRGALSLRRLRFVGCRFPASLALPPGLESLTVVRSGETTEAYWYGPTWREGLELRLVASDADGGGTALPPALSLTVRGYRVVDAPPALLARWGAEGRDRWDLVDLTGSDGGDDAVESESXXXXXXXXXXXGRAVGEPEHAAGGGLTDDEAQGW
Sbjct:    1 MPREAWDLSKSVRAESRPRVVFELREDEESEAAYCRALTSKRIVALTLRDGAPLPSPLPARGVLRQLVLTDGCAEGRPAPPLEALGALAAPLDLLSLFCCCDAAWAHAALARLPPRGFAVGTLEVSATSFPEGALRGFAGSAETLRAARRGVRGGVDDAQGLDLDGVRARRVELRGALYPARLPRRARELTAELAPVLTPADEWRGALSLRRLRFVGCRFPASLALPPGLESLTVVRSGETTEAYWYGPTWREGLELRLVASDADGGGTALPPALSLTVRGYRVVDAPPALLARWGAEGRDRWDLVDLTGSDGGDDAVESESXXXXXXXXXXXGRAVGEPEHAAGGGLTDDEAQGW 356
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347880 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CKH2_9STRA2.570e-243100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 314..328

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_16contigContig_16:1447672..1448742 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347880mRNA_3114Tribonema minus UTEX_B_3156 mRNAContig_16 1447645..1448742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347880|estExt_Genemark1.C_Ctg_160188 ID=Trimin1|347880|estExt_Genemark1.C_Ctg_160188|Name=jgi.p|Trimin1|347880|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=357bp
MPREAWDLSKSVRAESRPRVVFELREDEESEAAYCRALTSKRIVALTLRD
GAPLPSPLPARGVLRQLVLTDGCAEGRPAPPLEALGALAAPLDLLSLFCC
CDAAWAHAALARLPPRGFAVGTLEVSATSFPEGALRGFAGSAETLRAARR
GVRGGVDDAQGLDLDGVRARRVELRGALYPARLPRRARELTAELAPVLTP
ADEWRGALSLRRLRFVGCRFPASLALPPGLESLTVVRSGETTEAYWYGPT
WREGLELRLVASDADGGGTALPPALSLTVRGYRVVDAPPALLARWGAEGR
DRWDLVDLTGSDGGDDAVESESDASESESESDEGRAVGEPEHAAGGGLTD
DEAQGW*
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