Trimin1|347874|estExt_Genemark1.C_Ctg_160147 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347874
Unique NameTrimin1|347874|estExt_Genemark1.C_Ctg_160147
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length211
Homology
BLAST of jgi.p|Trimin1|347874 vs. uniprot
Match: A0A835ZDY9_9STRA (D27-like_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDY9_9STRA)

HSP 1 Score: 441 bits (1134), Expect = 6.550e-157
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
Query:    1 MLLGLFRKKLAAELQYDGSDPGYAGLIEMIRSLNDGPGYPTAHDTQQAARKVLQSLFPPWLPGAFAVMFSKPFPQFSCRMNAWVTLVASQWLMGPSKINDVEIDGGQMGVGHGLLVKRCRYLEEAGCASVCVNTCKIPTQEFFMKDMGLPLQMTPDYDDFSCQFSFGKIPLEPEQDEVFAVACFEQCPNKASTKRLCHKVGLEELNKLEV 210
            MLLGLFRKKLAAELQYDGSDPGYAGLIEMIRSLNDGPGYPTAHDTQQAARKVLQSLFPPWLPGAFAVMFSKPFPQFSCRMNAWVTLVASQWLMGPSKINDVEIDGGQMGVGHGLLVKRCRYLEEAGCASVCVNTCKIPTQEFFMKDMGLPLQMTPDYDDFSCQFSFGKIPLEPEQDEVFAVACFEQCPNKASTKRLCHKVGLEELNKLEV
Sbjct:    1 MLLGLFRKKLAAELQYDGSDPGYAGLIEMIRSLNDGPGYPTAHDTQQAARKVLQSLFPPWLPGAFAVMFSKPFPQFSCRMNAWVTLVASQWLMGPSKINDVEIDGGQMGVGHGLLVKRCRYLEEAGCASVCVNTCKIPTQEFFMKDMGLPLQMTPDYDDFSCQFSFGKIPLEPEQDEVFAVACFEQCPNKASTKRLCHKVGLEELNKLEV 210          
BLAST of jgi.p|Trimin1|347874 vs. uniprot
Match: D8LEW1_ECTSI (D27-like_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW1_ECTSI)

HSP 1 Score: 288 bits (736), Expect = 1.070e-94
Identity = 135/213 (63.38%), Postives = 171/213 (80.28%), Query Frame = 0
Query:    1 MLLGLFRKKLAAELQYDGS--DPGYAGLIEMIRSLNDGPGYPTAHDTQQAARKVLQSLFPPWLPGAFAVMFSKPFPQFSCRMNAWVTLVASQWLMGPSKINDVEIDGGQMGVGHGLLVKRCRYLEEAGCASVCVNTCKIPTQEFFMKDMGLPLQMTPDYDDFSCQFSFGKIPLEPEQDEVFAVACFEQCPNKASTKR-------LCHKVGLEE 204
            +LLGLFR KLA E+  DG   +PGY GL++MI+ LN+   +P+   TQ+A+R+VL+SLFP WLP +FAVMFSKPFP FS R+NAWVTLVASQWLMGPSK+ND+EID G +GVGHGLLV+RCR+LE AGCASVC+NTCK+PT+EFF KDMGL L+MTP+Y+DFSCQFSF K PL  + DE F VACFEQCP++ + ++        CH++ ++E
Sbjct:  104 ILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEK--FPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSRGALRQPNQPAVARCHQIDIDE 314          
BLAST of jgi.p|Trimin1|347874 vs. uniprot
Match: A0A836B305_CHLIN (D27-like_C domain-containing protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A836B305_CHLIN)

HSP 1 Score: 258 bits (658), Expect = 1.990e-84
Identity = 118/200 (59.00%), Postives = 148/200 (74.00%), Query Frame = 0
Query:    3 LGLFRKKLAAELQYDGSDPGYAGLIEMIRSLNDGPGYPTAHDTQQAARKVLQSLFPPWLPGAFAVMFSKPFPQFSCRMNAWVTLVASQWLMGPSKINDVEIDGGQMGVGHGLLVKRCRYLEEAGCASVCVNTCKIPTQEFFMKDMGLPLQMTPDYDDFSCQFSFGKIPLEPEQDEVFAVACFEQCPNKASTKRLCHKVGL 202
            + LFR+K+   L  D    GY  +I++ R LN    + TA +TQ+A R +L +LFP WLPGAF VMFS+P P+FSCR+NA+ T +  QWLMGP K+NDVEIDGGQ+G GHG+LV+RCRYLE+AGCASVC+N+CK+PTQ FF +DMGLPL MTP+YDDFSCQFSFGK P   E+D  FA  CF QCP+K +    C  + L
Sbjct:    1 MALFRRKMVDALGADSKLSGYDAIIDLTRKLNTK--FRTAAETQEATRGILNALFPSWLPGAFKVMFSRPLPEFSCRLNAFATAMTCQWLMGPCKVNDVEIDGGQVGTGHGVLVERCRYLEQAGCASVCINSCKVPTQSFFERDMGLPLTMTPNYDDFSCQFSFGKTPDPVERDPAFATPCFVQCPSKRARTPACGGIEL 198          
BLAST of jgi.p|Trimin1|347874 vs. uniprot
Match: A8IC34_CHLRE (Predicted protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IC34_CHLRE)

HSP 1 Score: 259 bits (661), Expect = 7.480e-84
Identity = 118/205 (57.56%), Postives = 151/205 (73.66%), Query Frame = 0
Query:    1 MLLGLFRKKLAAELQYDGSDPGYAGLIEMIRSLNDGPGYPTAHDTQQAARKVLQSLFPPWLPGAFAVMFSKPFPQFSCRMNAWVTLVASQWLMGPSKINDVEIDGGQMGVGHGLLVKRCRYLEEAGCASVCVNTCKIPTQEFFMKDMGLPLQMTPDYDDFSCQFSFGKIPLEPEQDEVFAVACFEQCPNKASTKRLCHKVGLEEL 205
            +++ LFR+K+   L  D    GY  +I++ R LN    + TA +TQ+A R +L +LFP WLPGAF VMFS+P P+FSCR+NA  T +  QWLMGP K+NDVEIDGG++G GHG+LV+RCRYLE+AGCASVC+N+CK+PTQ FF KDMGLPL MTP+YDDFSCQFSFGK P   ++D  FA  CF QCP+K S   +C  + L  +
Sbjct:   71 IVMALFRRKMVEALGSDSKLSGYDAIIDLTRKLNTK--FRTAAETQEATRGILNALFPSWLPGAFKVMFSRPLPEFSCRLNALATAMTCQWLMGPCKVNDVEIDGGKVGTGHGVLVERCRYLEQAGCASVCINSCKVPTQSFFEKDMGLPLTMTPNYDDFSCQFSFGKTPDPVDRDPAFATPCFTQCPSKRSRTPVCGGIELPSM 273          
BLAST of jgi.p|Trimin1|347874 vs. uniprot
Match: A0A0D2MYG1_9CHLO (D27-like_C domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MYG1_9CHLO)

HSP 1 Score: 256 bits (653), Expect = 1.850e-82
Identity = 116/193 (60.10%), Postives = 144/193 (74.61%), Query Frame = 0
Query:    1 MLLGLFRKKLAAELQYDGSDPGYAGLIEMIRSLNDGPGYPTAHDTQQAARKVLQSLFPPWLPGAFAVMFSKPFPQFSCRMNAWVTLVASQWLMGPSKINDVEIDGGQMGVGHGLLVKRCRYLEEAGCASVCVNTCKIPTQEFFMKDMGLPLQMTPDYDDFSCQFSFGKIPLEPEQDEVFAVACFEQCPNKAST 193
            +++ LFR+K+   +  D    GY  +I++ R LN    Y TA DTQ A R++L SLFP WLPGAF VMFS P P FSCR+NA  T +  QWLMGP K+NDVE+D G++G G G+LV+RCRYLEEAGCAS+C+N+CK+PTQEFF KDMGLPL MTP+Y+DFSCQF+FGK PL   QDE F+  CF QCP+K  T
Sbjct:   85 VVMALFRRKMVESIGSDSQLQGYPAIIDLTRRLNRQ--YQTARDTQLATRRILNSLFPSWLPGAFKVMFSAPLPAFSCRLNALATALTCQWLMGPCKVNDVELDSGEVGSGMGVLVERCRYLEEAGCASICINSCKVPTQEFFEKDMGLPLTMTPNYEDFSCQFAFGKTPLPQSQDEAFSTPCFTQCPSKKRT 275          
BLAST of jgi.p|Trimin1|347874 vs. uniprot
Match: A0A7J7QQS2_9CHLO (D27-like_C domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QQS2_9CHLO)

HSP 1 Score: 253 bits (646), Expect = 3.590e-82
Identity = 113/197 (57.36%), Postives = 147/197 (74.62%), Query Frame = 0
Query:    1 MLLGLFRKKLAAELQYDGSDPGYAGLIEMIRSLNDGPGYPTAHDTQQAARKVLQSLFPPWLPGAFAVMFSKPFPQFSCRMNAWVTLVASQWLMGPSKINDVEIDGGQMGVGHGLLVKRCRYLEEAGCASVCVNTCKIPTQEFFMKDMGLPLQMTPDYDDFSCQFSFGKIPLEPEQDEVFAVACFEQCPNKASTKRLC 197
            +++ LFR+K+ A +  D    GY  +I++ R LN    Y  A   Q   RK+L+SLFP WLPGAFAVMFSKP P+FSC++NA  T +  QWLMGP K+NDVE+D G +G G G+LV+RCRYLE+AGCAS+C+N+CK+PTQEFF KDMGLPL MTP+Y+DFSCQF+FGK PL  + DE F+  CF+QCP++A+    C
Sbjct:   22 VVMALFRRKMVAAIGSDSQLSGYEAIIDLTRRLN--ASYSEARQVQLTTRKILKSLFPSWLPGAFAVMFSKPLPEFSCKLNALATALTCQWLMGPCKVNDVELDDGSVGQGMGVLVERCRYLEQAGCASICINSCKVPTQEFFEKDMGLPLTMTPNYEDFSCQFTFGKAPLPQQLDEAFSTPCFQQCPSRAARYSDC 216          
BLAST of jgi.p|Trimin1|347874 vs. uniprot
Match: A0A8J4BT63_9CHLO (D27-like_C domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BT63_9CHLO)

HSP 1 Score: 254 bits (648), Expect = 4.610e-82
Identity = 116/190 (61.05%), Postives = 144/190 (75.79%), Query Frame = 0
Query:    1 MLLGLFRKKLAAELQYDGSDPGYAGLIEMIRSLNDGPGYPTAHDTQQAARKVLQSLFPPWLPGAFAVMFSKPFPQFSCRMNAWVTLVASQWLMGPSKINDVEIDGGQMGVGHGLLVKRCRYLEEAGCASVCVNTCKIPTQEFFMKDMGLPLQMTPDYDDFSCQFSFGKIPLEPEQDEVFAVACFEQCPNK 190
            +++ LFR+K+ A L  D    GY  +I++ R LN    + T  +TQ+A R +L +LFP WLPGAF VMFSKPFP+FSCR+NA  T +  QWLMGP K+NDVEIDGG +G GHG+LV+RCRYLE+AGCASVC+N+CKIPTQ FF KDMGL L MTP+Y+DFSCQF+FGK P+  E DE F   CF QCP+K
Sbjct:   62 VVMALFRRKMVAALGSDSELYGYDAIIDLTRRLNSK--FRTGAETQEATRAILNALFPSWLPGAFKVMFSKPFPEFSCRLNALATALTCQWLMGPCKVNDVEIDGGIVGKGHGVLVERCRYLEQAGCASVCINSCKIPTQTFFSKDMGLQLTMTPNYEDFSCQFAFGKTPMLAEMDEAFTTPCFRQCPSK 249          
BLAST of jgi.p|Trimin1|347874 vs. uniprot
Match: A0A2V0P122_9CHLO (D27-like_C domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P122_9CHLO)

HSP 1 Score: 256 bits (653), Expect = 4.920e-82
Identity = 115/190 (60.53%), Postives = 143/190 (75.26%), Query Frame = 0
Query:    1 MLLGLFRKKLAAELQYDGSDPGYAGLIEMIRSLNDGPGYPTAHDTQQAARKVLQSLFPPWLPGAFAVMFSKPFPQFSCRMNAWVTLVASQWLMGPSKINDVEIDGGQMGVGHGLLVKRCRYLEEAGCASVCVNTCKIPTQEFFMKDMGLPLQMTPDYDDFSCQFSFGKIPLEPEQDEVFAVACFEQCPNK 190
            +++ LFR+K+A  +  D    GY  +I++ R LN    YPTA DTQ   R +L SLFP WLPGAF  MFS+P P  SCR+NA+ T +  QWLMGP K+NDVEIDGGQ+G G G+LV+RCRYLEEAGCAS+C+N+CK+PTQEFF KDMGLPL MTP+YDDFSCQF+FGK P    +DE F+  CF QCP++
Sbjct:   42 VVMALFRRKMAEAIGSDSQLQGYPAIIDLTRRLNRQ--YPTARDTQLTTRAILNSLFPGWLPGAFRAMFSRPLPALSCRLNAFATALTCQWLMGPCKVNDVEIDGGQVGAGMGVLVERCRYLEEAGCASICINSCKVPTQEFFEKDMGLPLTMTPNYDDFSCQFAFGKTPQPQAEDEAFSTPCFTQCPSR 229          
BLAST of jgi.p|Trimin1|347874 vs. uniprot
Match: A0A8J9RQD0_9CHLO (Beta-carotene isomerase D27, chloroplastic n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RQD0_9CHLO)

HSP 1 Score: 248 bits (633), Expect = 1.130e-80
Identity = 112/188 (59.57%), Postives = 140/188 (74.47%), Query Frame = 0
Query:    3 LGLFRKKLAAELQYDGSDPGYAGLIEMIRSLNDGPGYPTAHDTQQAARKVLQSLFPPWLPGAFAVMFSKPFPQFSCRMNAWVTLVASQWLMGPSKINDVEIDGGQMGVGHGLLVKRCRYLEEAGCASVCVNTCKIPTQEFFMKDMGLPLQMTPDYDDFSCQFSFGKIPLEPEQDEVFAVACFEQCPNK 190
            + LFR+K+   +  D ++ GY  ++++ R LN     P   DTQ   R++L SLFP WLP AF VMFSKP P  SC++NAWVT++  QWLMGP K+NDVE+DGG++G G G+LV+RCRYLEE GCASVC+N+CKIPTQEFF KDMGLPL MTP+Y+DFSCQFSFG  P    +DE FA  CF QCP+K
Sbjct:    1 MSLFRRKMIDAIGSDSNNKGYDAIVDLTRVLNSQSNNP--RDTQIKTRQILLSLFPSWLPPAFKVMFSKPLPDLSCQLNAWVTMLTCQWLMGPCKVNDVEVDGGRLGSGQGVLVERCRYLEETGCASVCLNSCKIPTQEFFAKDMGLPLTMTPNYEDFSCQFSFGLTPKPVTEDEAFATPCFAQCPSK 186          
BLAST of jgi.p|Trimin1|347874 vs. uniprot
Match: I0YX40_COCSC (D27-like_C domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YX40_COCSC)

HSP 1 Score: 247 bits (630), Expect = 8.470e-80
Identity = 112/189 (59.26%), Postives = 140/189 (74.07%), Query Frame = 0
Query:    2 LLGLFRKKLAAELQYDGSDPGYAGLIEMIRSLNDGPGYPTAHDTQQAARKVLQSLFPPWLPGAFAVMFSKPFPQFSCRMNAWVTLVASQWLMGPSKINDVEIDGGQMGVGHGLLVKRCRYLEEAGCASVCVNTCKIPTQEFFMKDMGLPLQMTPDYDDFSCQFSFGKIPLEPEQDEVFAVACFEQCPNK 190
            ++ LFR+K+ A +  +    GY  ++++ R LN     P   DTQ   R++L SLFP WLP AF VMFSKP P+ SC++NAWVT++  QWLMGP K+NDVE+DGG++G G G+LV+RCRYLEE GCASVC+N+CKIPTQEFF KDMGLPL MTP+Y+DFSCQFSFG  P     DE FA  CF QCP+K
Sbjct:   29 IMSLFRQKMVAAIGKNSDKEGYDAIVDLTRLLNSKSSNP--RDTQVKTRQILLSLFPSWLPPAFKVMFSKPMPEVSCQLNAWVTMLTCQWLMGPCKVNDVELDGGRIGSGQGVLVERCRYLEETGCASVCLNSCKIPTQEFFAKDMGLPLTMTPNYEDFSCQFSFGLTPKPAAIDEAFATPCFSQCPSK 215          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347874 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZDY9_9STRA6.550e-157100.00D27-like_C domain-containing protein n=1 Tax=Tribo... [more]
D8LEW1_ECTSI1.070e-9463.38D27-like_C domain-containing protein n=1 Tax=Ectoc... [more]
A0A836B305_CHLIN1.990e-8459.00D27-like_C domain-containing protein n=2 Tax=Chlam... [more]
A8IC34_CHLRE7.480e-8457.56Predicted protein n=2 Tax=Chlamydomonas reinhardti... [more]
A0A0D2MYG1_9CHLO1.850e-8260.10D27-like_C domain-containing protein n=1 Tax=Monor... [more]
A0A7J7QQS2_9CHLO3.590e-8257.36D27-like_C domain-containing protein n=1 Tax=Scene... [more]
A0A8J4BT63_9CHLO4.610e-8261.05D27-like_C domain-containing protein n=2 Tax=Volvo... [more]
A0A2V0P122_9CHLO4.920e-8260.53D27-like_C domain-containing protein n=1 Tax=Raphi... [more]
A0A8J9RQD0_9CHLO1.130e-8059.57Beta-carotene isomerase D27, chloroplastic n=1 Tax... [more]
I0YX40_COCSC8.470e-8059.26D27-like_C domain-containing protein n=1 Tax=Cocco... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025114Beta-carotene isomerase D27-like, C-terminalPFAMPF13225D27-like_Ccoord: 91..174
e-value: 1.7E-34
score: 117.6
IPR038938Beta-carotene isomerase D27-likePANTHERPTHR33591BETA-CAROTENE ISOMERASE D27coord: 2..196
NoneNo IPR availablePANTHERPTHR33591:SF2BETA-CAROTENE ISOMERASE D27coord: 2..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_16contigContig_16:1291292..1296524 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347874mRNA_3077Tribonema minus UTEX_B_3156 mRNAContig_16 1291205..1296622 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347874|estExt_Genemark1.C_Ctg_160147 ID=Trimin1|347874|estExt_Genemark1.C_Ctg_160147|Name=jgi.p|Trimin1|347874|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=211bp
MLLGLFRKKLAAELQYDGSDPGYAGLIEMIRSLNDGPGYPTAHDTQQAAR
KVLQSLFPPWLPGAFAVMFSKPFPQFSCRMNAWVTLVASQWLMGPSKIND
VEIDGGQMGVGHGLLVKRCRYLEEAGCASVCVNTCKIPTQEFFMKDMGLP
LQMTPDYDDFSCQFSFGKIPLEPEQDEVFAVACFEQCPNKASTKRLCHKV
GLEELNKLEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025114D27-like_C
IPR038938D27-like