Trimin1|353330|estExt_Genemark1.C_Ctg_1570005 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353330
Unique NameTrimin1|353330|estExt_Genemark1.C_Ctg_1570005
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length489
Homology
BLAST of jgi.p|Trimin1|353330 vs. uniprot
Match: A0A835ZE59_9STRA (Leucine-rich repeat-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE59_9STRA)

HSP 1 Score: 539 bits (1388), Expect = 1.520e-186
Identity = 488/488 (100.00%), Postives = 488/488 (100.00%), Query Frame = 0
Query:    1 MRLTADVILRARASLNALRERELDLRGHKIPIIENIGVTQDQFDTIDFSDNEIQKLDNFPRMTRLTTLLLSNNVIARIGQDIGKKLPNLSCLVLTNNHISVLSELDPLGYCQQLTMLSLLENPVTRAQHYRLYVIHKIPSLKALDFCKVKKEERARAERLFQSAAGRAMEEDIALQAKTFVPGGAARAPLTPAQRTQVIAMIQRAMTTEEIDRLERMLEAGIYPAERKELDAAAAAAAPAXXXXXXXXXXXXXXXXXPAAPKPTMTGFVPASKPAXXXXXXXXXXXXXAAXXXXXXXXXXXXXXXXXXXPNGVHSEAPKXXXXXXXXXXXXAAXXXXXXAPQAMPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMXXXXXXXXXDDLTAEDVAAMKVADLKKALTARGLATSGLKAALQERLLAAIQT 488
            MRLTADVILRARASLNALRERELDLRGHKIPIIENIGVTQDQFDTIDFSDNEIQKLDNFPRMTRLTTLLLSNNVIARIGQDIGKKLPNLSCLVLTNNHISVLSELDPLGYCQQLTMLSLLENPVTRAQHYRLYVIHKIPSLKALDFCKVKKEERARAERLFQSAAGRAMEEDIALQAKTFVPGGAARAPLTPAQRTQVIAMIQRAMTTEEIDRLERMLEAGIYPAERKELDAAAAAAAPAXXXXXXXXXXXXXXXXXPAAPKPTMTGFVPASKPAXXXXXXXXXXXXXAAXXXXXXXXXXXXXXXXXXXPNGVHSEAPKXXXXXXXXXXXXAAXXXXXXAPQAMPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMXXXXXXXXXDDLTAEDVAAMKVADLKKALTARGLATSGLKAALQERLLAAIQT
Sbjct:    1 MRLTADVILRARASLNALRERELDLRGHKIPIIENIGVTQDQFDTIDFSDNEIQKLDNFPRMTRLTTLLLSNNVIARIGQDIGKKLPNLSCLVLTNNHISVLSELDPLGYCQQLTMLSLLENPVTRAQHYRLYVIHKIPSLKALDFCKVKKEERARAERLFQSAAGRAMEEDIALQAKTFVPGGAARAPLTPAQRTQVIAMIQRAMTTEEIDRLERMLEAGIYPAERKELDAAAAAAAPAXXXXXXXXXXXXXXXXXPAAPKPTMTGFVPASKPAXXXXXXXXXXXXXAAXXXXXXXXXXXXXXXXXXXPNGVHSEAPKXXXXXXXXXXXXAAXXXXXXAPQAMPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMXXXXXXXXXDDLTAEDVAAMKVADLKKALTARGLATSGLKAALQERLLAAIQT 488          
BLAST of jgi.p|Trimin1|353330 vs. uniprot
Match: A0A7S3XKJ1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKJ1_HETAK)

HSP 1 Score: 239 bits (611), Expect = 1.150e-70
Identity = 132/227 (58.15%), Postives = 167/227 (73.57%), Query Frame = 0
Query:    1 MRLTADVILRARASLNALRERELDLRGHKIPIIENIGVTQDQFDTIDFSDNEIQKLDNFPRMTRLTTLLLSNNVIARIGQDIGKKLPNLSCLVLTNNHISVLSELDPLGYCQQLTMLSLLENPVTRAQHYRLYVIHKIPSLKALDFCKVKKEERARAERLFQSAAGRAMEEDIALQAKTFVPGGAA---RAPLTPAQRTQVIAMIQRAMTTEEIDRLERMLEAGIYP 224
            MRLTADVILRA A++N  +ERELDLRG+KIP+IEN+G TQD FDTIDFSDNEI+KL+NFPRM RLTTLL +NN I++I + I  ++PNLS L      I  L+ELD L   ++LT+LSLLENPV R QHYRLYVIH+ P+LK LDF KVK++ER  A RLF+S AG+ M++D+  + KTF  G      +  LT  Q+  +   I+ A T EE+D+LER L+AGI P
Sbjct:    1 MRLTADVILRADATINPCKERELDLRGYKIPVIENVGATQDMFDTIDFSDNEIKKLENFPRMERLTTLLFNNNHISKIAESIKDQVPNLSTLXXXXXRIQHLAELDSLQGLRKLTLLSLLENPVVRRQHYRLYVIHRCPALKYLDFRKVKQQERQEAARLFKSKAGQQMQDDVQKEIKTFQAGEKQEREKKRLTEDQKNLIREAIKNATTPEEVDKLERQLKAGIMP 227          
BLAST of jgi.p|Trimin1|353330 vs. uniprot
Match: D8LSC4_ECTSI (U2 small nuclear ribonucleoprotein A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC4_ECTSI)

HSP 1 Score: 240 bits (613), Expect = 2.290e-70
Identity = 135/229 (58.95%), Postives = 167/229 (72.93%), Query Frame = 0
Query:    1 MRLTADVILRARASLNALRERELDLRGHKIPIIENIGVTQDQFDTIDFSDNEIQKLDNFPRMTRLTTLLLSNNVIARIGQDIGKKLPNLSCLVLTNNHISVLSELDPLGYCQQLTMLSLLENPVTRAQHYRLYVIHKIPSLKALDFCKVKKEERARAERLFQSAAGRAMEEDIALQA---KTFVPGGAA--RAPLTPAQRTQVIAMIQRAMTTEEIDRLERMLEAGIYP 224
            MRLTAD+I+ ARAS+N   ERELDLRG+KIP+IEN+GVTQDQFD +DFSDNEI+KLDNFPR  RL++LLL NN +++I +D+G  LPNLSCL+LTNN +S L+EL  LG C +LTMLSLL N V   Q+YRLY+I+ IPSLK LDF KV  +ER  A RL +S AG+AM +D+A QA   KTF PG  A     LT   R      I +A T EEI+ L + ++AGI P
Sbjct:    1 MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTALPNLSCLILTNNKLSTLAELKGLGTCTKLTMLSLLHNEVVNKQYYRLYMINLIPSLKQLDFQKVTVKERESAVRLARSQAGQAMIQDVAQQAEKAKTFTPGAPAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIP 229          
BLAST of jgi.p|Trimin1|353330 vs. uniprot
Match: A0A7S2G9L1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G9L1_9STRA)

HSP 1 Score: 229 bits (585), Expect = 2.050e-68
Identity = 127/234 (54.27%), Postives = 161/234 (68.80%), Query Frame = 0
Query:    1 MRLTADVILRARASLNALRERELDLRGHKIPIIENIGVTQDQFDTIDFSDNEIQKLDNFPRMTRLTTLLLSNNVIARIGQDIGKKLPNLSCLVLTNNHISVLSELDPLGYCQQLTMLSLLENPVTRAQHYRLYVIHKIPSLKALDFCKVKKEERARAERLFQSAAGRAMEEDIALQAKTFVPGGAA------RAPLTPAQRTQVIAMIQRAMTTEEIDRLERMLEAGIYPAERK 228
            +RLTADV   A   +N  +ERELDLRG KIP IEN+GVTQDQFD +DF+DNEI+++DNFP   RL+TLLLSNN + R+   + ++LPNL CL         LSE+D L  C +LTMLS + NP+ R QHYRLYVI K+P LKALDF KVK  ER  A +LF+SAAGR M++D+  ++KTF PG          A LT  Q+ QV A+I  A T EE+DR+ER L+AG+ P  +K
Sbjct:    2 VRLTADVFAHAVPRMNCCQERELDLRGLKIPAIENVGVTQDQFDVLDFTDNEIKRVDNFPTFKRLSTLLLSNNHVTRLSPTLSEQLPNLDCLXXXXXXXXNLSEVDNLIGCTKLTMLSFVNNPIIRRQHYRLYVIAKLPQLKALDFVKVKAIEREEAAKLFRSAAGRLMQQDVEAESKTFTPGEDIPSTTNPMANLTAEQKDQVRAVIAAASTPEEVDRIERQLKAGVIPTLKK 235          
BLAST of jgi.p|Trimin1|353330 vs. uniprot
Match: A0A7S2WMG2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMG2_9STRA)

HSP 1 Score: 228 bits (582), Expect = 2.230e-68
Identity = 128/232 (55.17%), Postives = 164/232 (70.69%), Query Frame = 0
Query:    1 MRLTADVILRARASLNALRERELDLRGHKIPIIENIGVTQDQFDTIDFSDNEIQKLDNFPRMTRLTTLLLSNNVIARIGQDIGKKLPNLSCLVLTNNHISVLSELDPLGYCQQLTMLSLLENPVTRAQHYRLYVIHKIPSLKALDFCKVKKEERARAERLFQSAAGRAMEEDIALQAKTFVPG----GAARAPLTPAQRTQVIAMIQRAMTTEEIDRLERMLEAGIYPAERK 228
            +RLTADV+    A +N   +RELD+RG K+P IENIGVT+DQ+DT+DFSDNEI+KL+NFPR +RL+TLLL+NN IARI   +G++L +L            LSE+D L  C +LT LSL+ NPV R QHYRLYVIHK+PS+K LDF KVK +ERA A RLF+SAAG+ M++D+  +A TF PG        A  T  Q  QV A+I  A T EE+DR+ER L+AGI P+ +K
Sbjct:    2 VRLTADVLQNCFARINPCLDRELDIRGLKVPAIENIGVTKDQYDTLDFSDNEIKKLENFPRFSRLSTLLLNNNHIARISPTLGEQLLSLQXXXXXXXXXXQLSEVDHLVGCTKLTTLSLVNNPVARRQHYRLYVIHKLPSVKVLDFSKVKPQERADAARLFKSAAGKLMQQDVDAEASTFTPGEDMPSNPMANFTEEQMAQVRAVIAAATTPEEVDRVERQLKAGIIPSLKK 233          
BLAST of jgi.p|Trimin1|353330 vs. uniprot
Match: A0A7S2F7F7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F7F7_9STRA)

HSP 1 Score: 232 bits (592), Expect = 9.440e-68
Identity = 137/238 (57.56%), Postives = 165/238 (69.33%), Query Frame = 0
Query:    1 MRLTADVILRARASLNALRERELDLRGHKIPIIENIGVTQDQFDTIDFSDNEIQKLDNFPRMTRLTTLLLSNNVIARIGQDIGKKLPNLSCLVLTNNHISVLSELDPLGYCQQLTMLSLLENPVTRAQHYRLYVIHKIPSLKALDFCKVKKEERARAERLFQSAAGRAMEEDIALQAKTFVPGGAARAPLTPAQ-----RTQVIAMIQRAMTTEEIDRLERMLEAGIYPAERKELDAA 233
            MRLT+DV+L A A LN   ERELDLRG KIP IENIGVTQD +DT+DF+DNEI+KL+NFP   RL+ LLLSNN +  I  +I +K+P+L  LVLTNN I+ LSE+D L  C  LT LSLL NPV R QHYR YVI K+P LK LDF K+K +ER  AERLF+SAAG+ M+ED+ L++K      A  A    AQ     R QV A I  A T +EIDR+ER L+AGI P  +  L AA
Sbjct:    1 MRLTSDVLLNAHARLNPCSERELDLRGLKIPAIENIGVTQDLYDTLDFTDNEIKKLENFPNTKRLSCLLLSNNHVKIINPEISEKIPSLRTLVLTNNKITNLSEVDNLAACANLTELSLLSNPVIRRQHYRFYVISKLPQLKVLDFSKIKPKERQEAERLFRSAAGKLMQEDV-LKSKEIETDEAETATHNMAQLNEVDRAQVRAAIAAASTPQEIDRIERQLKAGILPTVKNALPAA 237          
BLAST of jgi.p|Trimin1|353330 vs. uniprot
Match: UPI001884F496 (U2 small nuclear ribonucleoprotein A'-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001884F496)

HSP 1 Score: 219 bits (557), Expect = 1.060e-64
Identity = 119/233 (51.07%), Postives = 168/233 (72.10%), Query Frame = 0
Query:    1 MRLTADVILRARASLNALRERELDLRGHKIPIIENIGVTQDQFDTIDFSDNEIQKLDNFPRMTRLTTLLLSNNVIARIGQDIGKKLPNLSCLVLTNNHISVLSELDPLGYCQQLTMLSLLENPVTRAQHYRLYVIHKIPSLKALDFCKVKKEERARAERLFQSAAGRAMEEDIALQAKTFVPGG----AARAPLTPA----QRTQVIA-MIQRAMTTEEIDRLERMLEAGIYP 224
            ++L+ D+I +A   +N +RERELDLRG+KIP+IEN+G T DQFDTIDFSDNEI+KLD FP + RL +L+++NN I R+G+D+   LP+L  L+LTNN +  L++LDPLG   QLT LSLL NPV   QHYRLY + ++P L+ LDF +VK++ER +A  LF+S  G+ M+++I+ +AKTFVPG     A +A   PA    + T++I   I RA + +EI+RL +ML +G+ P
Sbjct:    2 VKLSVDLIQQAYQHINPVRERELDLRGYKIPVIENLGATLDQFDTIDFSDNEIRKLDGFPLLKRLKSLMMNNNRIVRVGEDLHSSLPSLETLLLTNNSLQELADLDPLGQLPQLTTLSLLGNPVAMRQHYRLYAVFRMPHLRVLDFRRVKQKEREQANALFKSKKGKQMQKEISKRAKTFVPGAGLESAVQARAVPAGPTAEDTRLIKEAIARATSLQEIERLNQMLRSGVVP 234          
BLAST of jgi.p|Trimin1|353330 vs. uniprot
Match: A0A4D9D4U7_9STRA (SAP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4U7_9STRA)

HSP 1 Score: 224 bits (571), Expect = 2.970e-64
Identity = 123/229 (53.71%), Postives = 162/229 (70.74%), Query Frame = 0
Query:    1 MRLTADVILRARASLNALRERELDLRGHKIPIIENIGVTQDQFDTIDFSDNEIQKLDNFPRMTRLTTLLLSNNVIARIGQDIGKKLPNLSCLVLTNNHISVLSELDPLGYCQQLTMLSLLENPVTRAQHYRLYVIHKIPSLKALDFCKVKKEERARAERLFQSAAGRAMEEDIALQAKTFVPGGAARAP----LTPAQRTQVIAMIQRAMTTEEIDRLERMLEAGIYPA 225
            MR+TADV++ ARA +N ++ERELDLRG KIP+IEN+GVTQDQFDT+D SDNEI++LDNFPRM RL TLLL NN IAR G  +G+++  L  LVLTNN ++ LSE+D L    +L  LSL++NPV R+ HYRLY++HK+P L  LDF KVK +ER  A++LFQS AG+     IA + K        +A     +T  ++    AMI +A T EE++R+ER L AGI+ A
Sbjct:    1 MRITADVVVHARAFVNPVKERELDLRGLKIPLIENLGVTQDQFDTVDLSDNEIRRLDNFPRMRRLKTLLLCNNSIARFGSALGEQISELEALVLTNNKVASLSEIDHLASLTKLRHLSLVDNPVVRSLHYRLYILHKLPHLTVLDFQKVKADERRAAKKLFQSQAGQQHLSAIADEGKLLAAESTGKAREKRVMTEEEKRLAQAMIDKATTPEELERVERQLRAGIFKA 229          
BLAST of jgi.p|Trimin1|353330 vs. uniprot
Match: UPI0018D1E65C (U2 small nuclear ribonucleoprotein A' n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D1E65C)

HSP 1 Score: 218 bits (554), Expect = 3.580e-64
Identity = 116/231 (50.22%), Postives = 162/231 (70.13%), Query Frame = 0
Query:    1 MRLTADVILRARASLNALRERELDLRGHKIPIIENIGVTQDQFDTIDFSDNEIQKLDNFPRMTRLTTLLLSNNVIARIGQDIGKKLPNLSCLVLTNNHISVLSELDPLGYCQQLTMLSLLENPVTRAQHYRLYVIHKIPSLKALDFCKVKKEERARAERLFQSAAGRAMEEDIALQAKTFVPGGAARAP----LTPAQRTQVIAMIQRAMTTEEIDRLERMLEAGIYPAER 227
            ++LT ++I  +   +NA R+RELDLRG+KIP IEN+G T DQFDTIDFSDN+++KLD FP + RL  LLL+NN I RIG+++ + LPNL  L+LTNNH+  L +LDPL    +LT LSLL NPV   QHYR YV  K+P L+ LDF K+K++ER  A  LF+S  G+ M+++I  +AKTFVPGG    P    LTP +  ++   I+ A + +E+++L RML++G  P ++
Sbjct:    2 VKLTTELINNSMQYMNACRDRELDLRGYKIPQIENMGATLDQFDTIDFSDNDVRKLDGFPLLKRLKCLLLNNNRIVRIGENLEQYLPNLESLILTNNHLQELGDLDPLATLPKLTSLSLLHNPVANKQHYRAYVAFKLPELRLLDFRKIKQKERDEANTLFKSKKGKEMQKEIQKKAKTFVPGGNMPDPKVTNLTPQEIHKIREAIKNASSLQEVEKLTRMLQSGQIPGQK 232          
BLAST of jgi.p|Trimin1|353330 vs. uniprot
Match: H1A3I9_TAEGU (LRRcap domain-containing protein n=18 Tax=Neognathae TaxID=8825 RepID=H1A3I9_TAEGU)

HSP 1 Score: 217 bits (552), Expect = 4.570e-64
Identity = 120/234 (51.28%), Postives = 165/234 (70.51%), Query Frame = 0
Query:    1 MRLTADVILRARASLNALRERELDLRGHKIPIIENIGVTQDQFDTIDFSDNEIQKLDNFPRMTRLTTLLLSNNVIARIGQDIGKKLPNLSCLVLTNNHISVLSELDPLGYCQQLTMLSLLENPVTRAQHYRLYVIHKIPSLKALDFCKVKKEERARAERLFQSAAGRAMEEDIALQAKTFVPGGAA-----RAPLTPAQRTQVIAMIQRAMTTEEIDRLERMLEAGIYPA-ERK 228
            ++LTA++I +A    NA+R+RELDLRG+KIP+IEN+G T DQFD IDFSDNEI+KLD FP + RL TLL++NN I RIG+++ + LP+L+ L+LTNN+I+ L ELDPL   + LT LS+L NPVT  +HYRLY+IHK+P ++ LDF KVK +ER  AE++F+   G  + +DIA +AKTF PG        +   +P     + A I  A T  E++RL+ +L+AG  P  ERK
Sbjct:    2 VKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLMNNNRICRIGENLEQALPSLTELILTNNNIAELGELDPLSSIKSLTYLSVLRNPVTNKKHYRLYLIHKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARRAKTFNPGAGLPTDKKKTGPSPGDVEAIKAAIANASTLAEVERLKGLLQAGQIPGRERK 235          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353330 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZE59_9STRA1.520e-186100.00Leucine-rich repeat-domain-containing protein n=1 ... [more]
A0A7S3XKJ1_HETAK1.150e-7058.15Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D8LSC4_ECTSI2.290e-7058.95U2 small nuclear ribonucleoprotein A n=1 Tax=Ectoc... [more]
A0A7S2G9L1_9STRA2.050e-6854.27Hypothetical protein (Fragment) n=2 Tax=Florenciel... [more]
A0A7S2WMG2_9STRA2.230e-6855.17Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2F7F7_9STRA9.440e-6857.56Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
UPI001884F4961.060e-6451.07U2 small nuclear ribonucleoprotein A'-like n=1 Tax... [more]
A0A4D9D4U7_9STRA2.970e-6453.71SAP domain-containing protein n=2 Tax=Monodopsidac... [more]
UPI0018D1E65C3.580e-6450.22U2 small nuclear ribonucleoprotein A' n=1 Tax=Plut... [more]
H1A3I9_TAEGU4.570e-6451.28LRRcap domain-containing protein n=18 Tax=Neognath... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003603U2A'/phosphoprotein 32 family A, C-terminalSMARTSM00446LRRcap_2coord: 127..145
e-value: 9.4E-4
score: 28.5
IPR003034SAP domainSMARTSM00513sap_9coord: 452..486
e-value: 5.7E-10
score: 49.1
IPR003034SAP domainPFAMPF02037SAPcoord: 454..485
e-value: 2.6E-11
score: 43.0
IPR003034SAP domainPROSITEPS50800SAPcoord: 452..486
score: 10.944932
NoneNo IPR availablePFAMPF14580LRR_9coord: 2..174
e-value: 3.1E-68
score: 228.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 415..449
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 349..369
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 349..363
NoneNo IPR availablePANTHERPTHR10552:SF6U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A'coord: 1..254
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 18..152
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..175
e-value: 1.5E-45
score: 156.3
IPR036361SAP domain superfamilyGENE3D1.10.720.30SAP domaincoord: 442..488
e-value: 3.6E-10
score: 41.3
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 451..486
IPR044640U2 small nuclear ribonucleoprotein A'PANTHERPTHR10552U2 SMALL NUCLEAR RIBONUCLEOPROTEIN Acoord: 1..254
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 88..109
score: 8.012282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_157contigContig_157:26440..30461 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353330mRNA_16346Tribonema minus UTEX_B_3156 mRNAContig_157 25921..30571 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353330|estExt_Genemark1.C_Ctg_1570005 ID=Trimin1|353330|estExt_Genemark1.C_Ctg_1570005|Name=jgi.p|Trimin1|353330|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=489bp
MRLTADVILRARASLNALRERELDLRGHKIPIIENIGVTQDQFDTIDFSD
NEIQKLDNFPRMTRLTTLLLSNNVIARIGQDIGKKLPNLSCLVLTNNHIS
VLSELDPLGYCQQLTMLSLLENPVTRAQHYRLYVIHKIPSLKALDFCKVK
KEERARAERLFQSAAGRAMEEDIALQAKTFVPGGAARAPLTPAQRTQVIA
MIQRAMTTEEIDRLERMLEAGIYPAERKELDAAAAAAAPAPAAAAAPAAA
AAAAPAKPAAPKPTMTGFVPASKPAAAAEEPAAAAAAAAAPASKPAAAAE
GAPAAAAAAPNGVHSEAPKAPASGAAAPSAPAAAAAAAAAPQAMPPPAAP
AAAAAPAEPAPTQPAPAAAAAAAPAPSAAAAAPEPAAAAPAPAAAAAAEP
MAMAVDGAAADAGADAMDVDAAEGGGEGGGGGDAMDEGEGGGEGDDLTAE
DVAAMKVADLKKALTARGLATSGLKAALQERLLAAIQT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003603U2A'_phosphoprotein32A_C
IPR003034SAP_dom
IPR032675LRR_dom_sf
IPR036361SAP_dom_sf
IPR044640RU2A
IPR001611Leu-rich_rpt