mRNA_14826 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|353324
Unique Name	mRNA_14826
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|353324 vs. uniprot
Match: A0A836CKM1_9STRA (Elongation factor P (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKM1_9STRA)

HSP 1 Score: 328 bits (842), Expect = 5.130e-113
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 2

Query:  152 MKHVKPGKGGAFNQIELKELMGGTKKTERFRSSETVELAHIDKEEQLDFLYRDGGLLALMNPQTFEQIEVPVDMLSADHQRLLQEGMPVAVEKYQGRPLFARIPKDVTVQVTDTKTHVKGVSVNAGFKPATVTGGAMVKVPPYIAAGDNIVINTTDMSFVRRTSE 646
            MKHVKPGKGGAFNQIELKELMGGTKKTERFRSSETVELAHIDKEEQLDFLYRDGGLLALMNPQTFEQIEVPVDMLSADHQRLLQEGMPVAVEKYQGRPLFARIPKDVTVQVTDTKTHVKGVSVNAGFKPATVTGGAMVKVPPYIAAGDNIVINTTDMSFVRRTSE
Sbjct:    1 MKHVKPGKGGAFNQIELKELMGGTKKTERFRSSETVELAHIDKEEQLDFLYRDGGLLALMNPQTFEQIEVPVDMLSADHQRLLQEGMPVAVEKYQGRPLFARIPKDVTVQVTDTKTHVKGVSVNAGFKPATVTGGAMVKVPPYIAAGDNIVINTTDMSFVRRTSE 165

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BLAST of jgi.p|Trimin1|353324 vs. uniprot
Match: A0A397PCL7_9HYPH (Elongation factor P n=1 Tax=Dichotomicrobium thermohalophilum TaxID=933063 RepID=A0A397PCL7_9HYPH)

HSP 1 Score: 175 bits (444), Expect = 3.440e-52
Identity = 83/182 (45.60%), Postives = 126/182 (69.23%), Query Frame = 2

Query:   92 NQLRVGQVIDKDGKLWEVKTMKHVKPGKGGAFNQIELKELMGGTKKTERFRSSETVELAHIDKEEQLDFLYRDGGLLALMNPQTFEQIEVPVDMLSADHQRLLQEGMPVAVEKYQGRPLFARIPKDVTVQVTDTKTHVKGVSVNAGFKPATVTGGAMVKVPPYIAAGDNIVINTTDMSFVRR 637
            N++R G VI+  G LW    ++HVKPGKG A+ Q+ELK L+ GTK  ERFRSSETVE   +++ +   +LY +G +L  M+ +TFEQIE+P D +  + +  LQEGM V VE ++GRP+   +P  VTV+V + +  VKG + ++ +KPA +  G  V VPP++++G+ IV++T+D+S+VRR
Sbjct:    6 NEIRPGNVIEHKGGLWAAVKIQHVKPGKGPAYAQVELKNLLDGTKLNERFRSSETVERVRLEQRD-FQYLYEEGDMLVFMDMETFEQIEIPADFVG-ERKAFLQEGMQVTVEMHEGRPIGVTLPDQVTVEVAEAEPVVKGQTASSSYKPAVLENGVRVMVPPFVSSGEKIVVDTSDLSYVRR 185

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BLAST of jgi.p|Trimin1|353324 vs. uniprot
Match: W7TRC5_9STRA (Translation elongation factor p n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRC5_9STRA)

HSP 1 Score: 173 bits (439), Expect = 7.940e-51
Identity = 84/182 (46.15%), Postives = 122/182 (67.03%), Query Frame = 2

Query:   92 NQLRVGQVIDKDGKLWEVKTMKHVKPGKGGAFNQIELKELMGGTKKTERFRSSETVELAHIDKEEQLDFLYRDGGLLALMNPQTFEQIEVPVDMLSADHQRLLQEGMPVAVEKYQGRPLFARIPKDVTVQVTDTKTHVKGVSVNAGFKPATVTGGAMVKVPPYIAAGDNIVINTTDMSFVRR 637
            NQ+RVG V++  GKL  VK  + VKPGKGGAFNQ+EL+++  G K  ER R+SE+VE   +D EE  D+LY +G  L LMN Q F QIEV  ++LS   Q+ LQEG+ + V+ ++G PL  R+P+ + V+V  T+   KG   +  FKPAT++ G ++KVPP++  G+ ++INT +M +  R
Sbjct:   51 NQVRVGNVLEYKGKLVMVKRAQAVKPGKGGAFNQVELRDIRTGLKYHERLRASESVEKVRLDDEELYDYLYEEGDKLVLMNKQDFTQIEVSRNVLSETEQKFLQEGLTLRVQFHEGSPLLVRLPRTLVVEVASTEPFSKGSQASPTFKPATLSNGEVLKVPPFVGVGEKVIINTEEMEYQSR 232

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BLAST of jgi.p|Trimin1|353324 vs. uniprot
Match: A0A3D9HJT7_9PROT (Elongation factor P n=1 Tax=Aestuariispira insulae TaxID=1461337 RepID=A0A3D9HJT7_9PROT)

HSP 1 Score: 171 bits (434), Expect = 1.190e-50
Identity = 81/185 (43.78%), Postives = 120/185 (64.86%), Query Frame = 2

Query:   92 NQLRVGQVIDKDGKLWEVKTMKHVKPGKGGAFNQIELKELMGGTKKTERFRSSETVELAHIDKEEQLDFLYRDGGLLALMNPQTFEQIEVPVDMLSADHQRLLQEGMPVAVEKYQGRPLFARIPKDVTVQVTDTKTHVKGVSVNAGFKPATVTGGAMVKVPPYIAAGDNIVINTTDMSFVRRTSE 646
            N +R G VI+ +G+LW     +HVKPGKGGAF Q+ELK++  GTK  ERFRSSETVE   +D++E   FL+ +G     M+ +++EQI V +D++  D    LQ+GM V +E ++  P+   +P  VT+++T+    VKG + ++ +KPA +  GA V VPPYI +G  IV+NT D +FV R  +
Sbjct:    6 NAIRPGNVIEHEGRLWRAVKTQHVKPGKGGAFLQVELKDIRSGTKLNERFRSSETVERVRLDQKE-FQFLFNEGDEYTFMDQESYEQIAVNIDLIGEDQAIFLQDGMVVTIESFEDSPISVMLPDTVTMEITEADAVVKGQTASSSYKPAILENGARVMVPPYIESGTRIVVNTADSTFVERAKD 189

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BLAST of jgi.p|Trimin1|353324 vs. uniprot
Match: UPI0012BC6377 (elongation factor P n=1 Tax=Curvivirga aplysinae TaxID=2529852 RepID=UPI0012BC6377)

HSP 1 Score: 171 bits (432), Expect = 2.390e-50
Identity = 84/185 (45.41%), Postives = 117/185 (63.24%), Query Frame = 2

Query:   92 NQLRVGQVIDKDGKLWEVKTMKHVKPGKGGAFNQIELKELMGGTKKTERFRSSETVELAHIDKEEQLDFLYRDGGLLALMNPQTFEQIEVPVDMLSADHQRLLQEGMPVAVEKYQGRPLFARIPKDVTVQVTDTKTHVKGVSVNAGFKPATVTGGAMVKVPPYIAAGDNIVINTTDMSFVRRTSE 646
            N +R G VI+  G LW     +HVKPGKGGAF Q+ELKE+  GTK  ERFRSSETVE   ++++E   FL+ DG     M+ +TF+QI +  DM+  D  + LQ+GM V +E ++  P+   +P+ VTV+V +    VKG + ++ +KPA V GG  V VPPY+  G  IV+NT D +FV R  +
Sbjct:    6 NAIRPGNVIEHKGGLWRAVKTQHVKPGKGGAFLQVELKEIRTGTKLNERFRSSETVERVRLEQKE-FQFLFADGSDFTFMDQETFDQITLNEDMIGEDQAKFLQDGMVVVIESFEESPIGVELPQHVTVEVLEADAVVKGQTASSSYKPAVVEGGVRVMVPPYVETGIRIVVNTDDATFVERAKD 189

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BLAST of jgi.p|Trimin1|353324 vs. uniprot
Match: A0A3C0TYN6_9PROT (Elongation factor P n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TYN6_9PROT)

HSP 1 Score: 169 bits (429), Expect = 6.390e-50
Identity = 80/182 (43.96%), Postives = 121/182 (66.48%), Query Frame = 2

Query:   92 NQLRVGQVIDKDGKLWEVKTMKHVKPGKGGAFNQIELKELMGGTKKTERFRSSETVELAHIDKEEQLDFLYRDGGLLALMNPQTFEQIEVPVDMLSADHQRLLQEGMPVAVEKYQGRPLFARIPKDVTVQVTDTKTHVKGVSVNAGFKPATVTGGAMVKVPPYIAAGDNIVINTTDMSFVRR 637
            N++R+G VI   G LW      HVKPGKGGAF Q+ELK L+ GTK  ERFRSSETVE   +D+++   FLY +G  L  M+ +TF+QI++  D L  +    LQ+GM V VE ++GRP+  ++P+ VT+++ +T+  VKG +  + +KPA ++ G    VPP+   GD I+++T ++++VRR
Sbjct:    6 NEIRIGNVIQHKGGLWVAVKTSHVKPGKGGAFAQVELKNLIDGTKLNERFRSSETVERVRLDQKDY-QFLYAEGDSLTFMDQETFDQIQIETDFLG-ERAAFLQDGMQVMVESFEGRPIGVKLPQQVTLEIAETEPTVKGQTAASSYKPAVLSNGVRCMVPPFCGTGDRIIVDTEEVTYVRR 185

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BLAST of jgi.p|Trimin1|353324 vs. uniprot
Match: A0A3M1PFI1_9PROT (Elongation factor P n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1PFI1_9PROT)

HSP 1 Score: 169 bits (428), Expect = 9.330e-50
Identity = 78/182 (42.86%), Postives = 124/182 (68.13%), Query Frame = 2

Query:   92 NQLRVGQVIDKDGKLWEVKTMKHVKPGKGGAFNQIELKELMGGTKKTERFRSSETVELAHIDKEEQLDFLYRDGGLLALMNPQTFEQIEVPVDMLSADHQRLLQEGMPVAVEKYQGRPLFARIPKDVTVQVTDTKTHVKGVSVNAGFKPATVTGGAMVKVPPYIAAGDNIVINTTDMSFVRR 637
            N++R G VI+  G LW    ++H +PGKGGA+ Q+ELK L+ GTK  ERFR++E VE   +D+ +   +LYR+  + + M+ +T++QI++P++ +  +  R LQEGM V +E ++GRP+   +P+ VT+ VT+T+  VKG +  + +KPA++  G  V VPP+I AGD IV+ T D S+V+R
Sbjct:    6 NEIRPGMVIEHKGSLWRAVKIQHTQPGKGGAYLQVELKNLLDGTKLNERFRAAEKVERVRLDQRD-FQYLYREDDMFSFMDLETYDQIQLPLEQIGEEAARFLQEGMTVKIELHEGRPIGLELPEQVTLTVTETEPVVKGQTAASSYKPASLENGVRVMVPPFINAGDRIVVATADASYVKR 186

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BLAST of jgi.p|Trimin1|353324 vs. uniprot
Match: UPI000571E206 (elongation factor P n=1 Tax=Thermopetrobacter sp. TC1 TaxID=1495045 RepID=UPI000571E206)

HSP 1 Score: 169 bits (428), Expect = 9.330e-50
Identity = 79/185 (42.70%), Postives = 127/185 (68.65%), Query Frame = 2

Query:   92 NQLRVGQVIDKDGKLWEVKTMKHVKPGKGGAFNQIELKELMGGTKKTERFRSSETVELAHIDKEEQLDFLYRDGGLLALMNPQTFEQIEVPVDMLSADHQRLLQEGMPVAVEKYQGRPLFARIPKDVTVQVTDTKTHVKGVSVNAGFKPATVTGGAMVKVPPYIAAGDNIVINTTDMSFVRRTSE 646
            N+++ G V+    +LW V  ++HVKPGKGGA+ Q+E+K ++G TK  ERFRSSETVE   +++++   +LY  G +L  M+ +T+EQIE+P + L  D    LQ+GM V VE ++G+PL  ++P  VT++V + +  VKG +  + +KPA +  G  + VPP+I+AG+ IV+NT D+++V+R S+
Sbjct:    6 NEIKPGNVLKHKDQLWVVTKVEHVKPGKGGAYAQVEMKSVVGNTKLNERFRSSETVERVRLEQKDY-QYLYEQGDMLVFMDMETYEQIELPKEFLG-DRAAFLQDGMTVTVESHEGKPLGVQLPLHVTLEVVEAEPVVKGQTAASSYKPAVLENGVRIMVPPFISAGEKIVVNTQDLTYVKRASD 188

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BLAST of jgi.p|Trimin1|353324 vs. uniprot
Match: A0A351T8Q4_9PROT (Elongation factor P n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T8Q4_9PROT)

HSP 1 Score: 167 bits (424), Expect = 3.640e-49
Identity = 81/182 (44.51%), Postives = 121/182 (66.48%), Query Frame = 2

Query:   92 NQLRVGQVIDKDGKLWEVKTMKHVKPGKGGAFNQIELKELMGGTKKTERFRSSETVELAHIDKEEQLDFLYRDGGLLALMNPQTFEQIEVPVDMLSADHQRLLQEGMPVAVEKYQGRPLFARIPKDVTVQVTDTKTHVKGVSVNAGFKPATVTGGAMVKVPPYIAAGDNIVINTTDMSFVRR 637
            N++R G VI     LW      HVKPGKGGAF Q+EL+ L+ GTK  ERFR+SE+VE   +D+++   FLY DG  L  M+ ++FEQI++  D+L  +    LQ+GM V VE Y+GRPL  ++P+ VT+++T+T+  VKG +  A +KPA +  G  V VPP+   GD I+++T ++++V+R
Sbjct:    6 NEIRPGNVIQHKASLWVAVKTNHVKPGKGGAFAQVELRNLLDGTKLNERFRASESVERVRLDQKDY-QFLYADGDKLTFMDQESFEQIDIDQDLLG-ERVAFLQDGMEVTVESYEGRPLGVQLPQHVTLEITETEPTVKGQTAAASYKPAMLDNGLRVMVPPFCGVGDKIIVDTEEVTYVKR 185

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BLAST of jgi.p|Trimin1|353324 vs. uniprot
Match: A0A2N6BN27_9HYPH (Elongation factor P n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A2N6BN27_9HYPH)

HSP 1 Score: 167 bits (424), Expect = 3.640e-49
Identity = 81/182 (44.51%), Postives = 125/182 (68.68%), Query Frame = 2

Query:   92 NQLRVGQVIDKDGKLWEVKTMKHVKPGKGGAFNQIELKELMGGTKKTERFRSSETVELAHIDKEEQLDFLYRDGGLLALMNPQTFEQIEVPVDMLSADHQRLLQEGMPVAVEKYQGRPLFARIPKDVTVQVTDTKTHVKGVSVNAGFKPATVTGGAMVKVPPYIAAGDNIVINTTDMSFVRR 637
            N++R G VI+  G LW    + HVKPGKGGAF QIELK L+ GTK  ERFRSSETVE   +++ +   FLY +G +L  M+ +++EQIE+ +D +  +  + LQ+GM V VE ++GRP+   +P  VT++VT+T+  +KG + ++ +KPA +  G  V VPP+I  G+ I+++T ++++VRR
Sbjct:    6 NEVRPGNVIEHKGGLWAAVKVGHVKPGKGGAFAQIELKNLIDGTKLNERFRSSETVERVRLEQNDY-QFLYAEGEMLVFMDNESYEQIELHLDFVG-ERAQFLQDGMIVTVESHEGRPIGISLPDQVTLEVTETEPTIKGQTASSSYKPALMDNGVRVMVPPFITVGERIIVDTNEITYVRR 185

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353324 vs. uniprot

BLAST of jgi.p|Trimin1|353324 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CKM1_9STRA	5.130e-113	100.00	Elongation factor P (Fragment) n=1 Tax=Tribonema m...	[more]
A0A397PCL7_9HYPH	3.440e-52	45.60	Elongation factor P n=1 Tax=Dichotomicrobium therm...	[more]
W7TRC5_9STRA	7.940e-51	46.15	Translation elongation factor p n=2 Tax=Nannochlor...	[more]
A0A3D9HJT7_9PROT	1.190e-50	43.78	Elongation factor P n=1 Tax=Aestuariispira insulae...	[more]
UPI0012BC6377	2.390e-50	45.41	elongation factor P n=1 Tax=Curvivirga aplysinae T...	[more]
A0A3C0TYN6_9PROT	6.390e-50	43.96	Elongation factor P n=1 Tax=Alphaproteobacteria ba...	[more]
A0A3M1PFI1_9PROT	9.330e-50	42.86	Elongation factor P n=1 Tax=Alphaproteobacteria ba...	[more]
UPI000571E206	9.330e-50	42.70	elongation factor P n=1 Tax=Thermopetrobacter sp. ...	[more]
A0A351T8Q4_9PROT	3.640e-49	44.51	Elongation factor P n=1 Tax=Alphaproteobacteria ba...	[more]
A0A2N6BN27_9HYPH	3.640e-49	44.51	Elongation factor P n=1 Tax=Hyphomicrobiales bacte...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_156	contig	Contig_156:282180..287294 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|353324\|estExt_Genemark1.C_Ctg_1560035
BRITE	ko00000,ko03012
KEGG ko	ko:K02356
Preferred name	efp
Description	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
COG category	J
Max annot lvl	28211\|Alphaproteobacteria
EggNOG OGs	COG0231@1\|root,COG0231@2\|Bacteria,1MW2J@1224\|Proteobacteria,2TUWE@28211\|Alphaproteobacteria,4BQD3@82117\|unclassified Alphaproteobacteria
Evalue	1.13e-44
Seed ortholog	1333998.M2A_3079
Hectar predicted targeting category	other localisation
TranscriptId	353646
Track	FilteredModels1
ProteinId	353324

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353324	gene_14826	Tribonema minus UTEX_B_3156	gene	Contig_156 282180..287294 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353324	Trimin1\|353324\|estExt_Genemark1.C_Ctg_1560035	Tribonema minus UTEX_B_3156	polypeptide	Contig_156 282331..287294 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_14826_1	exon_14826_1	Tribonema minus UTEX_B_3156	exon	Contig_156 282180..282372 +
exon_14826_2	exon_14826_2	Tribonema minus UTEX_B_3156	exon	Contig_156 283949..284146 +
exon_14826_3	exon_14826_3	Tribonema minus UTEX_B_3156	exon	Contig_156 286085..286201 +
exon_14826_4	exon_14826_4	Tribonema minus UTEX_B_3156	exon	Contig_156 287157..287294 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_14826	UTR5_14826	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_156 282180..282330 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_14826	CDS_14826	Tribonema minus UTEX_B_3156	CDS	Contig_156 282331..282372 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_156:282180..287294+
coding sequence from alignment at Contig_156:282180..287294+

spliced messenger RNA

>mRNA_14826 ID=mRNA_14826|Name=jgi.p|Trimin1|353324|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=646bp|location=Sequence derived from alignment at Contig_156:282180..287294+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGTCAACCGTGCTGCACGGTGCCTGCCGCACAGCCATGCTGCGAGGGCGT
CGTTAGGGGCATGTTCAGCCAGGAGCGTCAGCGTGATCACAAACCAACTG
CGGGTTGGACAAGTCATTGACAAAGACGGAAAGCTATGGGAGGTCAAAAC
GATGAAGCACGTTAAGCCTGGCAAAGGAGGCGCGTTCAATCAGATAGAGC
TCAAGGAGCTCATGGGTGGCACCAAGAAAACGGAGCGGTTTCGGAGCAGC
GAAACTGTCGAGCTGGCGCACATAGACAAAGAGGAGCAGCTGGACTTCTT
GTACAGGGATGGTGGCTTATTAGCGCTCATGAATCCGCAGACCTTTGAGC
AAATAGAGGTTCCTGTGGACATGCTGTCTGCTGACCATCAGCGCCTCCTC
CAAGAAGGCATGCCGGTGGCAGTGGAGAAGTATCAGGGGCGGCCGCTGTT
TGCGCGCATTCCCAAGGACGTCACGGTACAAGTGACTGACACCAAGACAC
ACGTAAAGGGTGTGTCTGTCAATGCGGGCTTCAAGCCAGCCACCGTTACA
GGGGGTGCCATGGTGAAGGTGCCCCCATACATAGCAGCGGGGGACAACAT
AGTTATCAACACAACAGACATGTCTTTTGTCAGACGAACATCTGAA

protein sequence of jgi.p|Trimin1|353324

>Trimin1|353324|estExt_Genemark1.C_Ctg_1560035 ID=Trimin1|353324|estExt_Genemark1.C_Ctg_1560035|Name=jgi.p|Trimin1|353324|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=165bp
MKHVKPGKGGAFNQIELKELMGGTKKTERFRSSETVELAHIDKEEQLDFL
YRDGGLLALMNPQTFEQIEVPVDMLSADHQRLLQEGMPVAVEKYQGRPLF
ARIPKDVTVQVTDTKTHVKGVSVNAGFKPATVTGGAMVKVPPYIAAGDNI
VINTTDMSFVRRTSE

mRNA from alignment at Contig_156:282180..287294+

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_14826 ID=mRNA_14826|Name=jgi.p|Trimin1|353324|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5115bp|location=Sequence derived from alignment at Contig_156:282180..287294+ (Tribonema minus UTEX_B_3156 )
GGTCAACCGTGCTGCACGGTGCCTGCCGCACAGCCATGCTGCGAGGGCGT
CGTTAGGGGCATGTTCAGCCAGGAGCGTCAGCGTGATCACAAACCAACTG
CGGGTTGGACAAGTCATTGACAAAGACGGAAAGCTATGGGAGGTCAAAAC
GATGAAGCACGTTAAGCCTGGCAAAGGAGGCGCGTTCAATCAGGTAATCA
TCGCGGTTGTCAACATGTCAGTCACCAAACTGCTTTTGCAAGTGGTTTTC
CACACATGTCACTCGCTCTGAGCAAAAATTGATAACTTGGACTGGTGTCT
GTGTGTATATGTGGAACTCCATCAATGTGCGGTCCTTGCAGTGTCATGTC
GTGCCTCATCACCTTCCATCACTCAAGTTCAAGAGTGGATGATGAGTCAT
GAGTTATTCAGAGTTGTTCAGCTGTTGCATGCAGTCATTACGCATCGTCT
GATTCAGTACACCTTGCGTATGGCATGTGCCTGCGACCGCTCTGCGGTGT
GGCTCTGTGTCAGAGCGAAGAACAGCTCATCCAAGGCAGCAGTCGAGCTT
CAAGACCACCATTTAGTACCAGCTTTGCTTTGCGGTTCAAGGTTTCAGAG
CAGGTGTGACTGGTTGTGCATGGTTGCAGCTGGACAGAGGAGACAGCTGG
CTGTCTCCTCCTGGCTGTCTCCTCCCGGAGCATGCATCATGCCATCCCAG
CAATACACCTGCAATCACTTCAAGCGAGACATGGTCATGCGATCAACTTC
AATCATACGCTGATTGAGGCCATGCCAAAGTGTCATGCATGACCATGTAA
CATGGTTGTAAATGTGTCATGCATGACTATGTGACATAGTTGTAAGTGTT
ATGGCCATCTCCTACAAACAGGCAGCTGTGGTTCAGTAACCCCACGACTT
CTTGGCGAAATCAAGGGCAGCGTTACCTGTTGAACCATTGCTTGACTGTA
GCCCATCTGTGGGTTACCCACATAACACAGTGCCGCCAACCATACATGCA
TCGCAGGCCTCCCAAGATGAGCACGTCTTGATGTTTGTGCACGTAATCGC
CAACAACCATATGCACCTTCACAAGTAACACGGGTGTTGACCTAGTGTAC
CTATAAGGTCGATCATGGCATGCCTTCTAACCGCTGGCATGCTCACGGCC
CAACCCCTTAACAGACTGCTCACCATTAGCAGAGACAAAGAGTGCCATTG
TGATGCTGTGGGATATATTTTTCTCTCATGTAGCTGGTGCTGTGCCTGCC
CCTCCAGTCGCAAATACATTTGCGCTCACTACCCTAACCCTAGCCCTAAA
GGCATATTTTTCTTCGATACATGTCAGCAGCAGGCAGTAGGCTTACTGCA
ACACAGCGCATACATATCTACTTCGTGGGTGCAATACAGCATCATCCCGA
CTGCCAGAGTCGTTTCCTTGATGTTATTGTTGACACACGCCAGATACGTC
ATGCGCCTGTCTGTGGTGTTGGCCACTGACGCGCCCATACTTCACAACAG
TTACACTGCAACAAGTATCATCAATGATAGTGAGCCACGCTGTGGCTACT
CCAGCCACATCACTGTACATCGCCTTCAACACCCACAACTATCATCATCT
GTTTTTGTTGGGGCTAGGGTTAGGTTTGGGTGGCATCAGATGGACGTGAA
AGGAGCATGTGTGGCAGACTGTGACTGTTGTAAATGCTGCTGTCGTTGCT
TTCCGTCAACTGCTGTCAAGACACTGAATTCCTCTGGCGCTGCACCATGG
TGATTCTCAACCTCCACAGATAGAGCTCAAGGAGCTCATGGGTGGCACCA
AGAAAACGGAGCGGTTTCGGAGCAGCGAAACTGTCGAGCTGGCGCACATA
GACAAAGAGGAGCAGCTGGACTTCTTGTACAGGGATGGTGGCTTATTAGC
GCTCATGAATCCGCAGACCTTTGAGCAAATAGAGGTTCCTGTGGACATGC
TGTCTGCTGACCATCAGGTGAAGAACATACACGGCCATATGGATTTGGCG
TGAAACTGCTGCTGGAATTGTTATGGCTGACAGCTGAGATCATGTAACAA
CCGCAGGTGCACAGTGCGGGGCATGGTGGTGTGTGAAGCAAGTGTCAGTA
ATGCTTCGACGTTTTACAATACAGAAACGTGTTGGACTCACCTTGATCAG
GAAGTGACAGTGGTCGCAGAACACGTTGCAGTTGAGCTTTATGAAAATAT
TGAAGTTTACACTCTAAAGTGTATACTACGGCCCAAGACATTGCACCAGG
CGGGGCTGTGTGCCTCATCAAGCTTTCTTACATTCAAACCTTCAAGACTA
ACGACCGAGCACCAAGCATGAATTTTTCTCAACAGATGGCTTTGCCTCTA
AGATGGCTTTGCTGCTAACCGTAACCCTGACCCTCTAGCCCTCACTTGCA
CGCAGCACTTCATCACAGATGTGAGCCTGAGCAAGTTAAAACGATGGACC
GCCTGTACTCACTACATAACCAAAATTGCGAACTGTCGCCACGGCAGCTT
CTTCTGCTGCTGCTGATGCAACTGTACCTGTTCCGCAACGCCAAGACAAA
ACAGATTACACATGCAGGGGGCTGGCAGTACAGGACATATGTTCTGTGCA
AAGGTGCACTGCTAGTAGTATTGTTGTTGGAGAGTGTCCATCCCTATTTA
GGACAGTGACCTCTTATTGGATGCATGCTTATGCATGCTTGCTTGTCAAA
GGTTTGTATAATGCAAATGGTGCTGACGGCAGCAGTGTCAGCATTAAGAG
TATGTGCGCACTGGTGCTTGCGTGTGCCGCAACGCCTGCAAACCCTAGTC
GAGCCTCACTCCTACTGATAGCCCTAGTTATTGCCCCCAAGGATCCAAGG
CAACTCGCTAACAAGTACCAACAGTTGCAAGCAAGCATTTGGTGCACACA
GAAGGCCTTGGTGACTGACATTACTAAGCATGCGCGCTGAGGTAAGTAGG
TATAGTGTGCAGTGGCAGAGGCACCTAGCCCATTTCACTGAGCCATGCCA
TACCCCAAGCCAACGTGACAGATGTACAAGGGGTATCGTCTGGTCGCGGT
GCGAACTTCAAAACTAATCCTAGCTCCAAACGCTCTTCTTCAAAGCAGAA
CATTGTTCAATGAGGCATGCTGAGACGTTTTGTGGCGCCCCTAACCCTAC
CTTAGGGTTTGGATTAACCCTATCCCTAACCCTAACCCACACCCAGCGTT
GAGGCCTGGCATGCCTGCAATGCATATTCATCCAGATGATGACAGCATTA
GCTGCGACATCATACTTGGACCAGTCGATCTGCTAGGGCTAGGGTCAGGG
CCAGCCTAATTCTACTCCTCGCCACATGTGCGTGTGCTACATATATTGTG
CCTGCTGAGAGTATTTCATGTCACAGAGTTGCACAGACGAACCAAGAATT
ACTGCTATACTTGTGGTGACCTGTCTCAATCCCTCTCAAGGACTGCTGCA
TTGATAGATATATCTTCACAAATCCCGTGTTGCAATGAAAGCTCATGAAA
GCCGGAGTGAGGGCATCTGGCGTTAAAGTGATGCTCAACAATTAATGCCA
GCAGTGCTCATCATATGCACGCATGTGTGCTCTGGAAGTAACACGTAGCA
GTGATTCCAAGTAATGCTTATTATAGGCATGCGCGTGTGTGTGCTCTTGA
GGATATGCTCAGGGTTAGGGTTAGGGTTAGTTTAACCCTAACCCTAAGTA
ATGGGCATGTACCTATGTGTCCCCTTGCAGCGATACATACTCATGGTGAT
GCTCAGCAGTGCTTATGAGGGGTACGTATGTATGTGCTCATGTTGCTCAC
TTGCCACAGCGCCTCCTCCAAGCAAGGCCGTACTCATTGGTGATGCTCAG
CAGTGCTCATGAGTGGTATGTATACGTATGCACGCATTTTGCTCAACTGC
TGCAGCGCCTCCTCCAAGAAGGCATGCCGGTGGCAGTGGAGAAGTATCAG
GGGCGGCCGCTGTTTGCGCGCATTCCCAAGGACGTCACGGTACAAGTGAC
TGACACCAAGACACACGTAAAGGTGCGTGGCCTGGGGTACAATACTGTCA
TTTTACCCGTTGTCGTCATGATGATGGTGTCGAAATATGGACCTCGCTTA
TATTCTTTGTTTCATTCAGTATTAGCACAGTACTAATTGTATAAGGCGTG
ATTATGTACTTGCGGCTGCACGTTGAGAATGGCCGTTACATTACATCACA
TTTCTCTTGATTCTACTAGTAAGTACTACTGTTTGTTGTTCTGGTCCGGC
GTGGCGCCTACGCTGTCACCTGGGGGCTGCCTGCGCCGTTTTCAGCTTGT
CTCCCTCTGCTCTGCGTTAGTGCGTATTTCCAACAAGGGCGTACGTCTCT
GTACAATGCAGGTCGTGGAAAGGCGAGTCCTGCCCCTGACAAGGCCATCA
TACGCGACGCGATATAATCTCATCACACCTGTCTACGGGTCGTATTCGAT
GATCTGTTTGTGTACCATATCTTACTGCGCGTTGATGTACTCTGCGGTTG
CTAGTGTTGACCAAACAACATCGACAGTCTAACTGCAAGAAACTGGAGAG
ACAATTATGGCAGCTTCTGATTGCATTGTGGGCTGGAAGCTCATATAAAA
CTGACCACATCTTTCATTTCTTGAAGGGCTTGAGCGTTTCTCCAACAGCA
GCGCTCCAGCGAATACTATTGAATGTATGCACACAGCCGCGCCTCTACTA
ACGTCTGTGAAGCACACATCGCCATATTTGAGGCATGGCTAGGTAGCGTC
ATCATACTCCAGGCATGCGTGAATAAACCCCAGCAGATGCATACCTGCAT
ATGATATTTGAGATACATACCCTAGCGGCTACATCTGAGGTGGTTTGCAC
ACCCGGCCGTTCTCCATTACTGAGCAAACAACGCGGCTGACGATCGTGTT
GCATTCGGTGCATGTAGCTCATGCTGACTGCTGCTGCGCCTGCCTACATA
CTTGCCTGCTACTGCTACAATGTGCAGGGTGTGTCTGTCAATGCGGGCTT
CAAGCCAGCCACCGTTACAGGGGGTGCCATGGTGAAGGTGCCCCCATACA
TAGCAGCGGGGGACAACATAGTTATCAACACAACAGACATGTCTTTTGTC
AGACGAACATCTGAA

Coding sequence (CDS) from alignment at Contig_156:282180..287294+

>mRNA_14826 ID=mRNA_14826|Name=jgi.p|Trimin1|353324|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=495bp|location=Sequence derived from alignment at Contig_156:282180..287294+ (Tribonema minus UTEX_B_3156 )
ATGAAGCACGTTAAGCCTGGCAAAGGAGGCGCGTTCAATCAGATAGAGCT
CAAGGAGCTCATGGGTGGCACCAAGAAAACGGAGCGGTTTCGGAGCAGCG
AAACTGTCGAGCTGGCGCACATAGACAAAGAGGAGCAGCTGGACTTCTTG
TACAGGGATGGTGGCTTATTAGCGCTCATGAATCCGCAGACCTTTGAGCA
AATAGAGGTTCCTGTGGACATGCTGTCTGCTGACCATCAGCGCCTCCTCC
AAGAAGGCATGCCGGTGGCAGTGGAGAAGTATCAGGGGCGGCCGCTGTTT
GCGCGCATTCCCAAGGACGTCACGGTACAAGTGACTGACACCAAGACACA
CGTAAAGGGTGTGTCTGTCAATGCGGGCTTCAAGCCAGCCACCGTTACAG
GGGGTGCCATGGTGAAGGTGCCCCCATACATAGCAGCGGGGGACAACATA
GTTATCAACACAACAGACATGTCTTTTGTCAGACGAACATCTGAA