Trimin1|353302|estExt_Genemark1.C_Ctg_1550027 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|353302
Unique Name	Trimin1\|353302\|estExt_Genemark1.C_Ctg_1550027
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	735

Homology

[Close]

BLAST of jgi.p|Trimin1|353302 vs. uniprot
Match: A0A835Z6Y6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Y6_9STRA)

HSP 1 Score: 1186 bits (3069), Expect = 0.000e+0
Identity = 734/734 (100.00%), Postives = 734/734 (100.00%), Query Frame = 0

Query:    1 MGTDNSKGNDRSTRAGGDGGSSTSRPKTVSTAAASGASLWDLAGSEALELSQSNFYTDAFKSFSSDRSGGSSAHGELDNTANNSGNPYARRSGGGQAWEQGAKGQLEAFVQQLECETQDEHHQGEGGDQETEQDVSXXXXXXXGQVILVVGIAGAFGREPDTLIRVKACVTHTERKAMGLKYFAGVMEDRILAAQQHQSPPXXXXXXXXXXHPQRCTPEHHCSSPMLQDAATAPTTAAEREFGGALEQYDVAQPDSVQRLPQHTSTTGDCAAPAATHGAIATPRAAAAXXXETFTTTPSAPYGHSSGSSGGSACATSLRSVLRQSGSAQPPLSALRGLSPISVRSTGAKAAGAGARLRTPSCRVSSGGYGGESXXXXXXXXXXXXXXXXXXXXXXXXXXIEFAGVLTQADNVSDGEXXXXXXXXXXXXAALRVQGGEEGSGADIGGRGLGLRERLLLRQGAGVGGAERSAAACTEAATDAIATPKAXXXXXXXXXXXXXASKARDRAADEGGAEAEQSQGTPNRATSVAGSSAGAGRXXXXXXXXXXXXXXTADAELYARGMPDYGAMPIHALNRAMAAYGLKRRPTAAAMAAKLREIWIAVNGGSGDAEDGATDVAMGRVAPLLTQPLPQREADEPRAPPPAGGDSPRHRRCSGGRGRQVHQSVPARLSGQRGRDVCSVRWRKKARCCCCRRWQTSQGAALARSACMPAYLPMITVRARATRGCACYRCVARS 734
            MGTDNSKGNDRSTRAGGDGGSSTSRPKTVSTAAASGASLWDLAGSEALELSQSNFYTDAFKSFSSDRSGGSSAHGELDNTANNSGNPYARRSGGGQAWEQGAKGQLEAFVQQLECETQDEHHQGEGGDQETEQDVSXXXXXXXGQVILVVGIAGAFGREPDTLIRVKACVTHTERKAMGLKYFAGVMEDRILAAQQHQSPPXXXXXXXXXXHPQRCTPEHHCSSPMLQDAATAPTTAAEREFGGALEQYDVAQPDSVQRLPQHTSTTGDCAAPAATHGAIATPRAAAAXXXETFTTTPSAPYGHSSGSSGGSACATSLRSVLRQSGSAQPPLSALRGLSPISVRSTGAKAAGAGARLRTPSCRVSSGGYGGESXXXXXXXXXXXXXXXXXXXXXXXXXXIEFAGVLTQADNVSDGEXXXXXXXXXXXXAALRVQGGEEGSGADIGGRGLGLRERLLLRQGAGVGGAERSAAACTEAATDAIATPKAXXXXXXXXXXXXXASKARDRAADEGGAEAEQSQGTPNRATSVAGSSAGAGRXXXXXXXXXXXXXXTADAELYARGMPDYGAMPIHALNRAMAAYGLKRRPTAAAMAAKLREIWIAVNGGSGDAEDGATDVAMGRVAPLLTQPLPQREADEPRAPPPAGGDSPRHRRCSGGRGRQVHQSVPARLSGQRGRDVCSVRWRKKARCCCCRRWQTSQGAALARSACMPAYLPMITVRARATRGCACYRCVARS
Sbjct:    1 MGTDNSKGNDRSTRAGGDGGSSTSRPKTVSTAAASGASLWDLAGSEALELSQSNFYTDAFKSFSSDRSGGSSAHGELDNTANNSGNPYARRSGGGQAWEQGAKGQLEAFVQQLECETQDEHHQGEGGDQETEQDVSXXXXXXXGQVILVVGIAGAFGREPDTLIRVKACVTHTERKAMGLKYFAGVMEDRILAAQQHQSPPXXXXXXXXXXHPQRCTPEHHCSSPMLQDAATAPTTAAEREFGGALEQYDVAQPDSVQRLPQHTSTTGDCAAPAATHGAIATPRAAAAXXXETFTTTPSAPYGHSSGSSGGSACATSLRSVLRQSGSAQPPLSALRGLSPISVRSTGAKAAGAGARLRTPSCRVSSGGYGGESXXXXXXXXXXXXXXXXXXXXXXXXXXIEFAGVLTQADNVSDGEXXXXXXXXXXXXAALRVQGGEEGSGADIGGRGLGLRERLLLRQGAGVGGAERSAAACTEAATDAIATPKAXXXXXXXXXXXXXASKARDRAADEGGAEAEQSQGTPNRATSVAGSSAGAGRXXXXXXXXXXXXXXTADAELYARGMPDYGAMPIHALNRAMAAYGLKRRPTAAAMAAKLREIWIAVNGGSGDAEDGATDVAMGRVAPLLTQPLPQREADEPRAPPPAGGDSPRHRRCSGGRGRQVHQSVPARLSGQRGRDVCSVRWRKKARCCCCRRWQTSQGAALARSACMPAYLPMITVRARATRGCACYRCVARS 734

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353302 vs. uniprot

BLAST of jgi.p|Trimin1|353302 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z6Y6_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 493..551
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..271
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 625..668
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 498..512
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 516..530

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_155	contig	Contig_155:274658..285425 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353302	mRNA_15855	Tribonema minus UTEX_B_3156	mRNA	Contig_155 274418..285425 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|353302|estExt_Genemark1.C_Ctg_1550027 ID=Trimin1|353302|estExt_Genemark1.C_Ctg_1550027|Name=jgi.p|Trimin1|353302|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=735bp
MGTDNSKGNDRSTRAGGDGGSSTSRPKTVSTAAASGASLWDLAGSEALEL
SQSNFYTDAFKSFSSDRSGGSSAHGELDNTANNSGNPYARRSGGGQAWEQ
GAKGQLEAFVQQLECETQDEHHQGEGGDQETEQDVSSGGGGDGGQVILVV
GIAGAFGREPDTLIRVKACVTHTERKAMGLKYFAGVMEDRILAAQQHQSP
PQSPPQSPPSNHPQRCTPEHHCSSPMLQDAATAPTTAAEREFGGALEQYD
VAQPDSVQRLPQHTSTTGDCAAPAATHGAIATPRAAAAAAAETFTTTPSA
PYGHSSGSSGGSACATSLRSVLRQSGSAQPPLSALRGLSPISVRSTGAKA
AGAGARLRTPSCRVSSGGYGGESKSESEAWAVGEGGGAGDGGAMDTDSEI
EFAGVLTQADNVSDGEGVGVERGRGGGGAALRVQGGEEGSGADIGGRGLG
LRERLLLRQGAGVGGAERSAAACTEAATDAIATPKAAAAAAAGGARRRGA
SKARDRAADEGGAEAEQSQGTPNRATSVAGSSAGAGRRGKKAPQGGGGGG
GTADAELYARGMPDYGAMPIHALNRAMAAYGLKRRPTAAAMAAKLREIWI
AVNGGSGDAEDGATDVAMGRVAPLLTQPLPQREADEPRAPPPAGGDSPRH
RRCSGGRGRQVHQSVPARLSGQRGRDVCSVRWRKKARCCCCRRWQTSQGA
ALARSACMPAYLPMITVRARATRGCACYRCVARS*