mRNA_15855 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|353302
Unique Name	mRNA_15855
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|353302 vs. uniprot
Match: A0A835Z6Y6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Y6_9STRA)

HSP 1 Score: 1186 bits (3068), Expect = 0.000e+0
Identity = 734/734 (100.00%), Postives = 734/734 (100.00%), Query Frame = 1

Query:    1 MGTDNSKGNDRSTRAGGDGGSSTSRPKTVSTAAASGASLWDLAGSEALELSQSNFYTDAFKSFSSDRSGGSSAHGELDNTANNSGNPYARRSGGGQAWEQGAKGQLEAFVQQLECETQDEHHQGEGGDQETEQDVSXXXXXXXGQVILVVGIAGAFGREPDTLIRVKACVTHTERKAMGLKYFAGVMEDRILAAQQHQSPPXXXXXXXXXXHPQRCTPEHHCSSPMLQDAATAPTTAAEREFGGALEQYDVAQPDSVQRLPQHTSTTGDCAAPAATHGAIATPRAAAAXXXETFTTTPSAPYGHSSGSSGGSACATSLRSVLRQSGSAQPPLSALRGLSPISVRSTGAKAAGAGARLRTPSCRVSSGGYGGESXXXXXXXXXXXXXXXXXXXXXXXXXXIEFAGVLTQADNVSDGEXXXXXXXXXXXXAALRVQGGEEGSGADIGGRGLGLRERLLLRQGAGVGGAERSAAACTEAATDAIATPKAXXXXXXXXXXXXXASKARDRAADEGGAEAEQSQGTPNRATSVAGSSAGAGRXXXXXXXXXXXXXXTADAELYARGMPDYGAMPIHALNRAMAAYGLKRRPTAAAMAAKLREIWIAVNGGSGDAEDGATDVAMGRVAPLLTQPLPQREADEPRAPPPAGGDSPRHRRCSGGRGRQVHQSVPARLSGQRGRDVCSVRWRKKARCCCCRRWQTSQGAALARSACMPAYLPMITVRARATRGCACYRCVARS 2202
            MGTDNSKGNDRSTRAGGDGGSSTSRPKTVSTAAASGASLWDLAGSEALELSQSNFYTDAFKSFSSDRSGGSSAHGELDNTANNSGNPYARRSGGGQAWEQGAKGQLEAFVQQLECETQDEHHQGEGGDQETEQDVSXXXXXXXGQVILVVGIAGAFGREPDTLIRVKACVTHTERKAMGLKYFAGVMEDRILAAQQHQSPPXXXXXXXXXXHPQRCTPEHHCSSPMLQDAATAPTTAAEREFGGALEQYDVAQPDSVQRLPQHTSTTGDCAAPAATHGAIATPRAAAAXXXETFTTTPSAPYGHSSGSSGGSACATSLRSVLRQSGSAQPPLSALRGLSPISVRSTGAKAAGAGARLRTPSCRVSSGGYGGESXXXXXXXXXXXXXXXXXXXXXXXXXXIEFAGVLTQADNVSDGEXXXXXXXXXXXXAALRVQGGEEGSGADIGGRGLGLRERLLLRQGAGVGGAERSAAACTEAATDAIATPKAXXXXXXXXXXXXXASKARDRAADEGGAEAEQSQGTPNRATSVAGSSAGAGRXXXXXXXXXXXXXXTADAELYARGMPDYGAMPIHALNRAMAAYGLKRRPTAAAMAAKLREIWIAVNGGSGDAEDGATDVAMGRVAPLLTQPLPQREADEPRAPPPAGGDSPRHRRCSGGRGRQVHQSVPARLSGQRGRDVCSVRWRKKARCCCCRRWQTSQGAALARSACMPAYLPMITVRARATRGCACYRCVARS
Sbjct:    1 MGTDNSKGNDRSTRAGGDGGSSTSRPKTVSTAAASGASLWDLAGSEALELSQSNFYTDAFKSFSSDRSGGSSAHGELDNTANNSGNPYARRSGGGQAWEQGAKGQLEAFVQQLECETQDEHHQGEGGDQETEQDVSXXXXXXXGQVILVVGIAGAFGREPDTLIRVKACVTHTERKAMGLKYFAGVMEDRILAAQQHQSPPXXXXXXXXXXHPQRCTPEHHCSSPMLQDAATAPTTAAEREFGGALEQYDVAQPDSVQRLPQHTSTTGDCAAPAATHGAIATPRAAAAXXXETFTTTPSAPYGHSSGSSGGSACATSLRSVLRQSGSAQPPLSALRGLSPISVRSTGAKAAGAGARLRTPSCRVSSGGYGGESXXXXXXXXXXXXXXXXXXXXXXXXXXIEFAGVLTQADNVSDGEXXXXXXXXXXXXAALRVQGGEEGSGADIGGRGLGLRERLLLRQGAGVGGAERSAAACTEAATDAIATPKAXXXXXXXXXXXXXASKARDRAADEGGAEAEQSQGTPNRATSVAGSSAGAGRXXXXXXXXXXXXXXTADAELYARGMPDYGAMPIHALNRAMAAYGLKRRPTAAAMAAKLREIWIAVNGGSGDAEDGATDVAMGRVAPLLTQPLPQREADEPRAPPPAGGDSPRHRRCSGGRGRQVHQSVPARLSGQRGRDVCSVRWRKKARCCCCRRWQTSQGAALARSACMPAYLPMITVRARATRGCACYRCVARS 734

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353302 vs. uniprot

BLAST of jgi.p|Trimin1|353302 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z6Y6_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_155	contig	Contig_155:274418..285425 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|353302\|estExt_Genemark1.C_Ctg_1550027
Hectar predicted targeting category	other localisation
TranscriptId	353624
Track	FilteredModels1
ProteinId	353302

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353302	gene_15855	Tribonema minus UTEX_B_3156	gene	Contig_155 274418..285425 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353302	Trimin1\|353302\|estExt_Genemark1.C_Ctg_1550027	Tribonema minus UTEX_B_3156	polypeptide	Contig_155 274658..285425 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_15855_8	exon_15855_8	Tribonema minus UTEX_B_3156	exon	Contig_155 274418..274932 -
exon_15855_7	exon_15855_7	Tribonema minus UTEX_B_3156	exon	Contig_155 277850..277983 -
exon_15855_6	exon_15855_6	Tribonema minus UTEX_B_3156	exon	Contig_155 278723..279105 -
exon_15855_5	exon_15855_5	Tribonema minus UTEX_B_3156	exon	Contig_155 279884..279994 -
exon_15855_4	exon_15855_4	Tribonema minus UTEX_B_3156	exon	Contig_155 281044..281802 -
exon_15855_3	exon_15855_3	Tribonema minus UTEX_B_3156	exon	Contig_155 282167..282225 -
exon_15855_2	exon_15855_2	Tribonema minus UTEX_B_3156	exon	Contig_155 283769..283817 -
exon_15855_1	exon_15855_1	Tribonema minus UTEX_B_3156	exon	Contig_155 284991..285425 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_15855	UTR3_15855	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_155 274418..274657 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_15855	CDS_15855	Tribonema minus UTEX_B_3156	CDS	Contig_155 284991..285425 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_155:274418..285425-
coding sequence from alignment at Contig_155:274418..285425-

spliced messenger RNA

>mRNA_15855 ID=mRNA_15855|Name=jgi.p|Trimin1|353302|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2445bp|location=Sequence derived from alignment at Contig_155:274418..285425- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCACTGACAACAGCAAAGGCAATGACAGGAGCACTCGCGCTGGCGG
CGACGGCGGCAGCAGCACCTCCAGGCCCAAGACAGTCAGCACTGCCGCAG
CCTCAGGTGCCTCTCTCTGGGACTTGGCCGGCAGCGAAGCCCTGGAACTG
AGCCAGAGCAACTTTTACACCGACGCATTCAAGTCTTTCAGCAGCGACAG
GAGCGGCGGCAGCAGTGCTCATGGCGAGTTGGACAATACTGCCAATAATA
GTGGCAACCCTTATGCGCGGCGCAGCGGTGGCGGTCAGGCATGGGAGCAG
GGAGCAAAGGGGCAACTGGAGGCGTTTGTGCAGCAGCTGGAGTGCGAAAC
GCAGGATGAGCATCATCAGGGGGAAGGGGGCGATCAGGAGACGGAGCAGG
ACGTGAGCAGCGGTGGCGGCGGTGACGGAGGACAGGTAATACTGGTCGTC
GGCATTGCTGGCGCGTTCGGCCGCGAGCCGGACACGCTCATCCGGGTCAA
GGCCTGCGTCACGCACACGGAGCGCAAGGCGATGGGGCTCAAGTACTTTG
CTGGCGTCATGGAGGACCGCATCCTCGCAGCGCAGCAGCACCAGTCCCCG
CCGCAATCACCCCCCCAAAGCCCCCCCTCGAACCACCCGCAGCGCTGCAC
TCCTGAGCATCACTGCAGCTCGCCCATGCTACAAGACGCTGCGACTGCAC
CCACGACAGCAGCAGAGCGAGAGTTCGGAGGCGCTCTGGAGCAATACGAC
GTGGCACAGCCGGATTCAGTGCAGCGGCTGCCACAGCACACTTCCACTAC
TGGCGACTGCGCGGCGCCAGCCGCAACGCACGGTGCCATCGCCACGCCGC
GTGCAGCTGCCGCCGCCGCCGCTGAAACCTTCACCACCACCCCAAGTGCG
CCCTATGGCCACAGCAGCGGCAGCAGCGGCGGCAGCGCTTGCGCTACGTC
TCTGAGGAGCGTGCTGCGACAGAGCGGCAGCGCGCAGCCGCCACTGTCAG
CGCTGCGCGGTCTGAGCCCGATATCCGTCCGCAGCACTGGCGCGAAAGCG
GCTGGCGCGGGTGCACGGCTCAGGACGCCGTCGTGTCGAGTCAGCAGCGG
AGGCTACGGAGGCGAGTCAAAGTCGGAGTCGGAGGCGTGGGCGGTGGGGG
AGGGGGGGGGTGCTGGCGATGGCGGCGCTATGGACACGGATTCGGAGATT
GAGTTTGCGGGCGTGTTGACACAGGCGGATAACGTTAGCGATGGCGAGGG
CGTGGGAGTGGAGCGTGGGAGGGGAGGCGGAGGAGCAGCGCTGAGAGTGC
AAGGGGGTGAAGAGGGGAGCGGTGCTGACATTGGGGGTCGGGGGCTGGGG
CTGAGGGAGCGGCTGCTGCTGCGCCAGGGGGCTGGGGTGGGGGGAGCAGA
GAGGAGTGCTGCTGCGTGCACGGAGGCAGCGACAGATGCTATCGCAACGC
CAAAGGCGGCAGCAGCGGCGGCGGCGGGGGGGGCGAGGCGTAGGGGCGCT
TCGAAGGCCAGGGACAGGGCGGCTGATGAGGGAGGGGCGGAAGCGGAGCA
GTCGCAAGGCACGCCCAACCGTGCTACGAGTGTTGCTGGTTCAAGCGCCG
GGGCTGGCCGGAGGGGGAAGAAGGCGCCGCAGGGGGGTGGGGGGGGCGGG
GGGACAGCGGATGCGGAGCTGTACGCACGCGGCATGCCTGATTATGGCGC
CATGCCGATTCACGCGCTGAACCGGGCGATGGCAGCGTATGGCCTCAAGC
GAAGGCCCACCGCAGCTGCCATGGCGGCGAAGCTGCGGGAGATTTGGATT
GCGGTGAATGGTGGCAGCGGCGATGCTGAGGATGGTGCGACTGACGTTGC
TATGGGACGCGTGGCACCCCTGCTGACACAGCCGCTTCCGCAGCGTGAGG
CAGATGAGCCCAGGGCACCGCCACCTGCAGGCGGTGACTCTCCACGACAT
CGCCGCTGCAGTGGCGGCCGCGGGCGTCAAGTGCACCAAAGTGTGCCTGC
GCGACTTTCTGGACAGCGAGGGCGTGACGTTTGTAGTGTCAGATGGCGCA
AAAAAGCGCGCTGCTGCTGCTGCAGGCGATGGCAGACCTCCCAAGGCGCG
GCGCTAGCACGTTCTGCCTGCATGCCTGCATACCTTCCGATGATCACAGT
TAGGGCACGAGCTACGCGTGGATGCGCTTGCTATCGCTGTGTAGCTCGCA
GCTGAACACGGTGTTGTTTCGTGAGATTTTCCTGCTGTGGGATGTGGCCA
AAAAGAGCACTGCGTGCTCATGTGTACCCAGCTCGACGTGCGTGGTTCCT
GCGCTAGAGCAGCGGCAAAGGCACATGAAAGCCCGTGGCAGGGCACTACG
AGTGCTTCAAGTTTTTTGCATTTGCTTGCGATGTACTTGCTGCCCTCAGA
CACAACCCCCCTCCCCCCCATCATGCCTGGGCAAGTGCCACAATG

protein sequence of jgi.p|Trimin1|353302

>Trimin1|353302|estExt_Genemark1.C_Ctg_1550027 ID=Trimin1|353302|estExt_Genemark1.C_Ctg_1550027|Name=jgi.p|Trimin1|353302|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=735bp
MGTDNSKGNDRSTRAGGDGGSSTSRPKTVSTAAASGASLWDLAGSEALEL
SQSNFYTDAFKSFSSDRSGGSSAHGELDNTANNSGNPYARRSGGGQAWEQ
GAKGQLEAFVQQLECETQDEHHQGEGGDQETEQDVSSGGGGDGGQVILVV
GIAGAFGREPDTLIRVKACVTHTERKAMGLKYFAGVMEDRILAAQQHQSP
PQSPPQSPPSNHPQRCTPEHHCSSPMLQDAATAPTTAAEREFGGALEQYD
VAQPDSVQRLPQHTSTTGDCAAPAATHGAIATPRAAAAAAAETFTTTPSA
PYGHSSGSSGGSACATSLRSVLRQSGSAQPPLSALRGLSPISVRSTGAKA
AGAGARLRTPSCRVSSGGYGGESKSESEAWAVGEGGGAGDGGAMDTDSEI
EFAGVLTQADNVSDGEGVGVERGRGGGGAALRVQGGEEGSGADIGGRGLG
LRERLLLRQGAGVGGAERSAAACTEAATDAIATPKAAAAAAAGGARRRGA
SKARDRAADEGGAEAEQSQGTPNRATSVAGSSAGAGRRGKKAPQGGGGGG
GTADAELYARGMPDYGAMPIHALNRAMAAYGLKRRPTAAAMAAKLREIWI
AVNGGSGDAEDGATDVAMGRVAPLLTQPLPQREADEPRAPPPAGGDSPRH
RRCSGGRGRQVHQSVPARLSGQRGRDVCSVRWRKKARCCCCRRWQTSQGA
ALARSACMPAYLPMITVRARATRGCACYRCVARS*

mRNA from alignment at Contig_155:274418..285425-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_15855 ID=mRNA_15855|Name=jgi.p|Trimin1|353302|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=11008bp|location=Sequence derived from alignment at Contig_155:274418..285425- (Tribonema minus UTEX_B_3156 )
ATGGGCACTGACAACAGCAAAGGCAATGACAGGAGCACTCGCGCTGGCGG
CGACGGCGGCAGCAGCACCTCCAGGCCCAAGACAGTCAGCACTGCCGCAG
CCTCAGGTGCCTCTCTCTGGGACTTGGCCGGCAGCGAAGCCCTGGAACTG
AGCCAGAGCAACTTTTACACCGACGCATTCAAGTCTTTCAGCAGCGACAG
GAGCGGCGGCAGCAGTGCTCATGGCGAGTTGGACAATACTGCCAATAATA
GTGGCAACCCTTATGCGCGGCGCAGCGGTGGCGGTCAGGCATGGGAGCAG
GGAGCAAAGGGGCAACTGGAGGCGTTTGTGCAGCAGCTGGAGTGCGAAAC
GCAGGATGAGCATCATCAGGGGGAAGGGGGCGATCAGGAGACGGAGCAGG
ACGTGAGCAGCGGTGGCGGCGGTGACGGAGGACAGGTATGTTGTTCATGA
ACGAATTCATGAAAATTCATGAAGCGTCGGCTCACCTCAGCGTGTAGGTG
GGTATTGCATGCTGGCAACATGTGCATTTGTGTGACACTAAACTTGGCGT
GGTATGGTAATCAAGCGAGAGTCAAGAGGAGTGTTGCACTGTGAACACAA
GTGTGACTGCGCTCCGAAGTGCATACAGCCAGATCAAACAGGCGGAAAAG
CTGCCATGGCCCTTGAAGTGCGGAAATTCGATTGCTCTTGCTTCCATACC
TGCGCGAGATGCGCGCGCGTCTCTTACTGATGACCCGAGTTCAAGTGTAC
GTTTAACTTAGCGCGCGGCGTGCGCACACATTTCCTGAAGCCTGATTGGC
CTGTTCCAAGTGCTAACGATTATGATTCTGTTGCAGTCACACCGAACCAA
AACAGACAAAAACGGTGATGAAAGTCGGTGCACACACCAGGGCGATGCAG
CTACGACTGCGAGGATGATACCGCGGGCACAGAACGGCTGCCACGATTGT
ATCGGCACCAGCGCACCCGGCGCACTGTACCTTTGGTCAACCTAGACTGG
ACTGTCGAGTATACTCACCCCAGGGGGGGCATGGCTGGTCCTGCCCCCCC
CCTAGGAAAAAGAAAGTTCAAGAATAAAGTGAAGAATAAAGCTTCACGGA
TAAAGGTCTGCACCAGCCAGGAGCAGCAGCAGTGTGACTCTGCTTCCAGC
ACCCGCAGCAGAGCTTGTGCCCGTCGCGCCTGACGGTGTCGACGAAAGCG
GGCCTGTCCAATTTTTCTTGACGTTCGCAGAGGGCGCGATGTGGTTCAAT
GAACGCTCAAAGAGATTGTTGAGCGCCACTTGTGTGGCCGTGGCGCGACA
TACATGGCGCTTTGAGGCTGATTTCAGGATTTTCCGCCAGCGGGCTGCAC
GCAAGTCATGGTGGGCTCTCCCGTCTCGGCAGTTCGACATGACCATTCAT
TACATTACACTTTTACTGCGCCGTGCTGATGGATGGCATTGTGTGATCTG
CAAGTGGCGCTCAACAATCTCTGTGAGCGTTCATTGAACCACATGGCGCC
CTCTGCAAACGCCGAGAAAAATTGGACAGGCCCGCTTTCGTCGACGTCGT
CAGGCGCGACGGGCACCGGGCGGCAAAGTGCGGTCAGCAGCCACTGTGTG
TTGCGCAGGTAATACTGGTCGTCGGCATTGCTGGCGCGTTCGGCCGCGAG
CCGGACAGTCACCACTCAAGTTGCCGCATGCAATGGCAAGACACATGAGG
TTGCAAATGGCACCACGCGATGTTCAACAACAAACAAGACAGCACCCCCC
CCTCTTAAAGGAATGAGGGGCGACTCGAGCGACCCGGAAACAGACCTCTT
TTGCAAGTTGCGCTTATAGCTAGTCACAGAGACAATAAGCCAACGAAGGT
GAAGTAGGGACCGTCCGTTGTTGGAAAATGTCAGAAACTTATTCAGATGT
TATCCCATTCAAATAATATAAATATGCCACAAAATCTGATTCCGCAATTT
ATTAATTGGCGCTCACAAATACCACAGAGCATTTCTGGTGCGCCAAAATG
CAACTGTGATTTGGGCAATGCCAGGAGTGCTGCTGCGCTGACAAGCAATT
GAGGGCAAGCCGTGGCCAAGCAGCTGTCCAGCAAGTGCAGTGCAATGAAG
AAGCCCTGTCGCTGGTGCAAAAGGATCAATAACCTGCGTGCCGAGAGGAT
TCCAGCCAAGGGTGTGAGGCATGAGTCACCCACGTAGTTGCTTAGGGTTA
GGGTTAGGGTTAGGGTTAGCACACAGTGAGTTGCTCACTTTGTTATTGAT
TGTTCCAGTCCGGGACCTTCAAGTTGAAGTTCTTCACTTGCTTTGCACTG
GCTGGCCAGCAGCTGCTTGGGTGCTGTTCTGGGTGTCTGCTGACTATGTT
GTGGATAAGCGAGCAACGTTGACGATGCTGTTGTCATCTACAACAAACTA
TGATAGCTTACTTTCAAGCCAGAGGCGTGGCGGCGCACATGAGTGCATGT
ACAGAGAATTGGCAACAACCGATGCTGTGACAGCCTGTCAAGTTCCTGAA
CCATAGAGTTCCGTGTTGATTCTGCACATGTGGTGTCACCGTGTATAGTT
GTGGAGGCCACTGCACTGCCTTTACATTGTGCAGCACTTGGGAAGGGCTG
ATGAAGAGTACTGCAACGCATTTGGCACGTCACTTGAAGAAGTTGTCAAG
GTTACAACAGCATGTCATTGCAGCAGCTGCTGGTGTGTGCAACTGTGATC
TGGCCCGCACAGAGGGTGTAAAACGCGACAGCTGTGCACTCCGTCAATCG
TGTTCATTTGCATATGACTTTTTGGTACCAGAAAACGGATGGGCAGGCAC
GTCAACTGCCATAACTTCAACTTTGACTTCAGACTCACTTGACGGGGTGC
GCCTTCATCTCCAGCCCGCACTCCTCAGTGTTCAGCGGCGCAGCGTACAT
GCATGAGTGCTACACATATCCACCTACCCGCCTCTGTGTACTTCAACTTC
AACTCCAAATGCACTTGACGATGCAACTGCCATGTACCCTATGAGCGCTG
CCTTGCAGCGCAGTTTTTTTAACGCGACTGTGCTGATGGCTGCACCCCCG
AACCCCCTCAGGCATGCTCTCGCGAAGCCCAGCAACGTGGCATTGCCAAA
TGGAAGCGTCTTGCACCATCAGACCTGGAGCAGTCTATGCCTGAGTGGGA
GGAGGGCCTGTCCTTTGTATGGGCATCTTGCGCTGACGATGTTGCAGCAG
CGCTCATCCGGGTCAAGGCCTGCGTCACGCACACGGAGCGCAAGGCGATG
GGGCTCAAGGTGACTGCTATCTGCTCAACTGTGTTTGTGTGGTAGTGGGC
TGTGTTGCTGCTACGCAGAGACGAGTGCAGAGCACTGGCGCGTGACGGAT
TAGGTTGCTATGATGGTCACTGTGCTGAAAACTGGGAATGCAACAAAGCT
TGAATCGCTTCACGCTGTTTTTGGGGGTAGAAACTGCACCCCCTTGATCA
TTGTATGGTCCTTCTCCACACGGTGTGCTGCATGCAGCAACGGCTGGTGA
CGCAGCCTGCTACTTCAGAAGTACTTATTTGCCGCTTATACAACTGATGC
ATCCTGTACTCCGGCCACACATGCAAACTTTGCTGACACATGTCATCCAC
TGCTTGTGGTGTGCGCTGCCCAGTACTTTGCTGGCGTCATGGAGGACCGC
ATCCTCGCAGCGCAGCAGCACCAGTCCCCGCCGCAATCACCCCCCCAAAG
CCCCCCCTCGAACCACCCGCAGCGCTGCACTCCTGAGCATCACTGCAGCT
CGCCCATGCTACAAGACGCTGCGACTGCACCCACGACAGCAGCAGAGCGA
GAGTTCGGAGGCGCTCTGGAGCAATACGACGTGGCACAGCCGGATTCAGT
GCAGCGGCTGCCACAGCACACTTCCACTACTGGCGACTGCGCGGCGCCAG
CCGCAACGCACGGTGCCATCGCCACGCCGCGTGCAGCTGCCGCCGCCGCC
GCTGAAACCTTCACCACCACCCCAAGTGCGCCCTATGGCCACAGCAGCGG
CAGCAGCGGCGGCAGCGCTTGCGCTACGTCTCTGAGGAGCGTGCTGCGAC
AGAGCGGCAGCGCGCAGCCGCCACTGTCAGCGCTGCGCGGTCTGAGCCCG
ATATCCGTCCGCAGCACTGGCGCGAAAGCGGCTGGCGCGGGTGCACGGCT
CAGGACGCCGTCGTGTCGAGTCAGCAGCGGAGGCTACGGAGGCGAGTCAA
AGTCGGAGTCGGAGGCGTGGGCGGTGGGGGAGGGGGGGGGTGCTGGCGAT
GGCGGCGCTATGGACACGGATTCGGAGATTGAGTTTGCGGGCGTGTTGAC
ACAGGCGGATAACGTTAGCGATGGCGAGGGCGTGGGAGTGGAGCGTGGGA
GGGGAGGCGGAGGAGCAGCGCTGAGAGTGCAAGTGAGTACATGTATATAC
TTGAAAAAAGGAGTTTTCCTATGTATGCATTCCATCACTCGAGAAAGAAG
GAGTATTCCCATGTATATAATGCTTTTATGTGTTATTTCCACATGAAGGT
ATTTCTTTGACGATGAAATACCAGGCAAATGGCAAGGCGTTGCCCTGATG
TAAAAGCCGAGGTATGTGCTGTTTGTTTGCTGGTTGATGCGCTTTCATGC
TTGATGCCGAGACTGGTGATTTTGGTCATCTAGGAATGCTGGCATGCCAT
GGTCTGGCTTCGCGTGTTTGTTCCTTGAACATTCGCAAAACATGATTATG
AGGGAGTCAATCAATTTTGATTCATAAATGCGAGAGGCAACTAGCTACCA
GACATTGCGCAAATATGTATAGCATGTATGTTGTGCGCATGTGAAGCGCT
CTGCTGATTTGGCACTCATCAACTGGGGGCAACTGGCATTTTCTGCATGA
GAGTGTGGAATTGCTCTGCGGGGAGCATACTTGTACTACATAGACAAATG
TATACTCACACTTGAAGGGTTGAACACTGCTTGATCCGCATGAAGCTTCA
TGTGAAAGTGCAAAGCGCATTCGTGCAGTTTGTACTTGCAGTTTTCAAGT
GTACTTTGGTCACTTGGTGAGGTGTACACCATTAGGTGATGACCAGTTCC
ACATACGCAATGTCGGATTGCCTGAGTCCTTGCAGACCTGGCTTGTACAG
AAAGAACTGCTTTGAAAGCCATCGCACCTTGCGATCTCAGTCGCGCTGTG
TAACTTCATCGGTGTACCGTGCACGCAACAGCACACTTCAATTCTATCTT
CCTGCTGAAGATGTGACGCTCACGCCGCACTGCCCCTCCCCCCCCTCCGC
GTGCCTGTCCCTGAAGTAGCGGTTCACCACGCCGCTAGCGTCATCCGCTG
CTGAGCAATACACCAAAGATGCACCAATGAGCCCAGCCTCATCGCCATCC
TCACTCTTCTACGAACTGCCGTCGGTGCTCGTGGCGAGCGCTGTGACCTC
GTGTCCCCCAACCCCCACTGGGGATGTTGAGGGGGGTGAAGAGGGGAGCG
GTGCTGACATTGGGGGTCGGGGGCTGGGGCTGAGGGAGCGGCTGCTGCTG
CGCCAGGGGGCTGGGGTGGGGGGAGCAGAGAGGAGTGCTGCTGTGAGGTA
GGTATAGGTATATTTTGTTTCTCGATACAAGACTGATCCGTGTGACTTTG
ACTCGCCTCCAGAAAGGCTTGCCAGCGATGATGCATGTCCTCTGGCATGC
AGAGTACTTGTGCACTTCTTGTGGAGTGAGGAGGTTTTGTATGTTCACAC
TCTCACACAACGCAGGGCGACATGTGATGGTGTGATGCAGGGGTACTGTA
CTGTTGTGGCAGGTGCAGTTTTTGGGTGCTTGCAAAGAAGAAGATGAATA
AAAGTGGATGATGGTGCTTAATGAAACTGCAGACATGGCAAGCATGGGCC
CACTAGCCGGAACTCTCTACAGACACTTCTTCAGGAAGCGAATCTACTGC
ACTCCGCAGTTGCCTGTGCAGTCAGCACCACCCTGCTCTTAGCAAACTGC
TCGAGCCAGACATTGTACTGATGCAGCTTCCTGGAATCTCAATCAGTGCT
GAGATCTCTCCTTACTCAAAAGCTGAACACATTACCCTGCCCTCCTCACT
GTTTATTACAGCGCACTGAGCGCTGCTGCAGCCACAGCGCTCAACAGCGC
AGGACAACCCGCACTGCGCCCAGCGACGAACGTGCGGCGCAACCGTGCAG
GCCCACGGGGCGTGGCAGCGGCCAGCGAGTCACAGGCAGACGCGACAGTG
CCACCGGCACCATGCGTTAATGCAGAGACTGCAGGGTCGCGCACACTGCA
GCACAGCTCAGCTTACGCGAATCACAGCCAATGTGCAGAGGCTGCTGCTG
CTGCTGCTGCGGGTGGCGAGGCGTGCACGGAGGCAGCGACAGATGCTATC
GCAACGCCAAAGGCGGCAGCAGCGGCGGCGGCGGGGGGGGCGAGGCGTAG
GGGCGCTTCGAAGGCCAGGGACAGGGCGGCTGATGAGGGAGGGGCGGAAG
CGGAGCAGTCGCAAGGCACGCCCAACCGTGCTACGAGTGTTGCTGGTTCA
AGCGCCGGGGCTGGCCGGAGGGGGAAGAAGGCGCCGCAGGGGGGTGGGGG
GGGCGGGGGGACAGCGGATGCGGAGCTGTACGCACGCGGCATGCCTGATT
ATGGCGCCATGCCGATTCACGCGCTGAACCGGGCGATGGCAGCGTATGGC
CTCAAGCGAAGGCCCACCGCAGCTGCCATGGCGGCGAAGCTGCGGGAGAT
TTGGTGCGTGGCGAATGCGTCGTTGCTGAACAGAATTGCGTTACGTCCAA
CAAAGTTCACTTAGACTCGAATTATGTGCATCGAATCAGCTCAATAGTTA
CCAAGTCACAAGGTCTCACGTTGTATATTGACGTGTGCACGCGGTTATTG
AATGCGTCCTTGTCAGACTGTGCATGGCTGGCAGTGCAGTGCAGCTGCAT
CATGTGTCAACACGTGGCCAACTTTGCAGCCGGTATTAACCATCCCTTGT
CACCTAGAGCTCTTCGATCTTTTGATTTGTTTTCATTAACTGGCTCGCTT
ATCCCGGGGTGACGACAGTGCTGGGATGCCTTCCAGTGTGCAACTGCGTC
GCCATGGGCCTGACGTGCAGATAGTATTGCTTTGAAAGTCTTCAACCTCG
ACTTTGGTGTTTGAGGCAGGGTGACACCATTTCCATGCGGCTTTGACTGG
CCCTATGCATGTGTATCATTGCAATACCTACTTAGAAGTATACTTGCATG
TAATCATACAGAGCAGTGGCAGCCGGCCGCGGAGGCCTTCGCGCCTGTGC
TCCTCACAGCGACACACATATGCTGCAGATGGTAGGCTGGCATTGCTACA
CGGTTGAGTTCCGCTGCAGTGGTTTTCATTGTTCACTGTGTCATGCTCAG
ACCGCTCCAACCGCTGACATTGCTCCAACTGCTGATAGCGTGTACCGCAC
TGATCCCATCGCGCGCCATTGTCATCGCCGTCTGGCTTGCAGGATTGCGG
TGAATGGTGGCAGCGGCGATGCTGAGGATGGTGCGACTGACGTTGCTATG
GGACGCGTGGCACCCCTGCTGACACAGCCGCTTCCGCAGCGTGAGGCAGA
TGAGCCCAGGGCACCGCCACCTGCAGGTATGCACCACTGTCACACTGGGC
CATTGCTTTCATTCATGGAAACGAGTCAAAATATCATAGAGCGTTAGGTG
ACACAAGGAGTGGTGAGCCGCAAGTGCCTTCCACCAGTAACCGTGGTCGC
CGCTGCTGCAGGCCGTTGGCCACGAGTCCAACAGTCTTATCATATCCACA
GCAGTCAAAAGGCTGTGCACAAGAATCATTGGCACGACAAAGTGCGATGA
AGCTGCTTTTGTGCACAGGTGGTGCTGCTGAATCATGACACCATGCTTGG
TGAGGCACTGAAATTTTGCTTTGCAGCCGGCTGCGCTGATGGATGAGGTA
GGATGGCACCAGCACCTTTGTCTTCCATGAACACCCTTGCAACTGCATGG
TGGCACGCGTGAATCAAGCTCACCTCATACATGAGTGCACTTTTTGTGTT
GGTATCCAGTACATACCGCAGGGCGTGAATCAAGCTCTCCTCATGAATCA
GTGCACTTAGTGTGTTGGTATTCAGTACATACTGCAAGGAGGCACTGGTT
AGATATACACACATTTCATAAGGTCACCTTCACCTACTTACTGGTGATTA
CTGATTTGCTGCTTGCATGCTCACTTCACAGCGAAACCGCGCAAGCGCAA
GACCACTGGTGCAGCAGCAGCTGACGCATCTGACGGCGACGCCACACAAG
ACAATGCTGGTGAGTCCAAGGAGTCGAGTCAAGTCATGGCCACGTCTTGC
CATGTGCTTTGCCTGGCTGCACTTCACGACCCAATATGTCATGTCACCAG
TACTTTGGTGACATTACCACCAGTAAATTGACATGACATGCATTGTGATC
AGGGAGCTGCGAATGAAACCTTACATCCTCAACTCATTGTGCACGGTCGC
CAACAACGCCGTCTGGAACTATGCATTTAATGTGTATGCAGCATTTCACT
GCAGCGACGTGCAATCGTTTTGCAACCAAGTCATTGCGGCCATTCTCATT
GTGCTACGCTGAATCAAATGTGCACTTCGCGTATCACAGGCGACCTGAGT
GCGCAAGTGCGTGACGCCATCGCGCGCAACCGCCCGCTATACGAGGCCCT
GCTCTGCTTTGAGGTGAAACTGCATTACAAATGTAGGCATATTTTTACCT
CATTCTCCACGGTGCTCTCCCTTCTGCTTCCTTGTACTTTAAGTGTGCAT
GGCAGCAGCCGAGCACAGCCGCTCAGCAGATGTCACTCGCTTAAGAAATA
TCATCAACGCGGCATTTTGAAGTTACAGTTACAGTCACTTTGCATGTAAA
AAGATTGTCGCCACAGGCTGGCAGCGTCACGCCGTCAGCATTATGGTGCA
AACACGCATTTGACATAGAGCTCAGCCTGCAGTAGTGCAGCTGGCAATGA
TGCACATGCTAGTGACAGTGCGGGTCAAACTGCCGGCACCCTGACTCCTC
CCCAGGTAGTGTGGGCATACTGGCTTTTGGGCGCAACGCACAGGGCTATT
GTTGGGTGCATGGGTGCCCTTCGTGGTCTGCTGTGCATGGCGCACACCTT
TGAGATTGATACTTGTATGCACTTTGCATCCAAAAGGGTCACAGCTTACA
CCACGCGTTGTCGTTGGACATCGACGACCTTTTTCTGAACTTGCTAGTGC
GGTTCGTCATCTCAGCCCTGCCAAGACCTATACTTTACAGTACTTCGCTC
GCCCCGAACTCTTTCATCAGGGGGTGCTTGCTTCCTGGTATTGGGCTTTT
TGTGGGCGCATGCTTGTAAAAGTATTGTTTCAACCGCCAACAAAGTCAAT
CCATGCACTTATGCACACGTTTTATTACAGGACGTTGTGACCCTCGCCTC
AAGAGGCAGCTTGCAAGACTTCCAGTTGCCTACGTTTCTTGGCAAGCGGT
GTCTCTATTAGATGACGTGAGTGTCTCTCTGGCTTCAACCCTAATGTGTA
TGTCACCAACTACTCCCAGTATACATACTAGAGTGTGACAACTATTGCTA
TAATAGTTAGTTATTCGGTATTGTTGCTCAACCATTCGTTAGTTATTCGT
TAGTTAACCTATTCGTTATTCATTATAAATTCGTTATTTTATCGTTGCTG
CTGTATACTACCAGTAATGCCCACCATCCTGGGATGAGGTAGCGTTGGAG
AGGAGCTACTTTCCCCTCTTGGACTTGCAAAGCATCTCAGTCGCCCTGTT
GCGAGCTACTCTAGCTCTAAAGCAGTTGCTACAATGCTAAGCTTTGCATA
AATCTACCCCAAAGAGGTCACACTATTGTTGACAACTTCATGTTGAACTT
CAACCAGAACTTGAACTTGGAAACATTTTGGTGCGCAGTGTGTGTGTGTC
AAGACGAGGAGCTCAGAGTGGGCGGCCGACTAGTATGAAAGCAAGCACTT
GAATGTGCAAGCCAGCACTCGACGTGTGCCCCCGTGCAACCACTCGGCTA
TCGTACCCCCCGTGATGTCTTCGTGCTGTTAGCCATGCCTTGTGCAAGCA
TAGCACAACCGTGAAAGGGTCAGGCAGCGGTGGCGGTACGCTGTTTGGCA
CACCAGCGCATTTCATACGTACCGCCATCGTTGTCACACGGTGCAGCAGA
GCTCGTGCAAACGAGCTGCAGCATTTACGTAAAAATGTGAAACAACGAAT
TCGCGTCGAGCGCTCTCGTTGGTTATTCGTAATATAACGAACAACTAAAC
CTAACGAAACAACGCGTTGTTTTATAATTCGTTATCACACTCTAATACAT
ACGACATACATTTCTTCGCCACCCAACCTCGAGTGGGAACTACAATGTAG
AAAATTGCTTGCACCACTCGTGGCTGTACGTATGGACTTGTATTTATAAA
GGCCCTCGTGGTTGTACTCTCTCCACAAGCTAACTTTGATTGAAACATCG
CACTTCAAACTGCACTTCTTTCTCATGTGCTCTGTCATGCCAGGCGGTGA
CTCTCCACGACATCGCCGCTGCAGTGGCGGCCGCGGGCGTCAAGTGCACC
AAAGTGTGCCTGCGCGACTTTCTGGACAGCGAGGGCGTGACGTTTGTAGT
GTCAGATGGCGCAAAAAAGCGCGCTGCTGCTGCTGCAGGCGATGGCAGAC
CTCCCAAGGCGCGGCGCTAGCACGTTCTGCCTGCATGCCTGCATACCTTC
CGATGATCACAGTTAGGGCACGAGCTACGCGTGGATGCGCTTGCTATCGC
TGTGTAGCTCGCAGCTGAACACGGTGTTGTTTCGTGAGATTTTCCTGCTG
TGGGATGTGGCCAAAAAGAGCACTGCGTGCTCATGTGTACCCAGCTCGAC
GTGCGTGGTTCCTGCGCTAGAGCAGCGGCAAAGGCACATGAAAGCCCGTG
GCAGGGCACTACGAGTGCTTCAAGTTTTTTGCATTTGCTTGCGATGTACT
TGCTGCCCTCAGACACAACCCCCCTCCCCCCCATCATGCCTGGGCAAGTG
CCACAATG

Coding sequence (CDS) from alignment at Contig_155:274418..285425-

>mRNA_15855 ID=mRNA_15855|Name=jgi.p|Trimin1|353302|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2205bp|location=Sequence derived from alignment at Contig_155:274418..285425- (Tribonema minus UTEX_B_3156 )
ATGGGCACTGACAACAGCAAAGGCAATGACAGGAGCACTCGCGCTGGCGG
CGACGGCGGCAGCAGCACCTCCAGGCCCAAGACAGTCAGCACTGCCGCAG
CCTCAGGTGCCTCTCTCTGGGACTTGGCCGGCAGCGAAGCCCTGGAACTG
AGCCAGAGCAACTTTTACACCGACGCATTCAAGTCTTTCAGCAGCGACAG
GAGCGGCGGCAGCAGTGCTCATGGCGAGTTGGACAATACTGCCAATAATA
GTGGCAACCCTTATGCGCGGCGCAGCGGTGGCGGTCAGGCATGGGAGCAG
GGAGCAAAGGGGCAACTGGAGGCGTTTGTGCAGCAGCTGGAGTGCGAAAC
GCAGGATGAGCATCATCAGGGGGAAGGGGGCGATCAGGAGACGGAGCAGG
ACGTGAGCAGCGGTGGCGGCGGTGACGGAGGACAGGTAATACTGGTCGTC
GGCATTGCTGGCGCGTTCGGCCGCGAGCCGGACACGCTCATCCGGGTCAA
GGCCTGCGTCACGCACACGGAGCGCAAGGCGATGGGGCTCAAGTACTTTG
CTGGCGTCATGGAGGACCGCATCCTCGCAGCGCAGCAGCACCAGTCCCCG
CCGCAATCACCCCCCCAAAGCCCCCCCTCGAACCACCCGCAGCGCTGCAC
TCCTGAGCATCACTGCAGCTCGCCCATGCTACAAGACGCTGCGACTGCAC
CCACGACAGCAGCAGAGCGAGAGTTCGGAGGCGCTCTGGAGCAATACGAC
GTGGCACAGCCGGATTCAGTGCAGCGGCTGCCACAGCACACTTCCACTAC
TGGCGACTGCGCGGCGCCAGCCGCAACGCACGGTGCCATCGCCACGCCGC
GTGCAGCTGCCGCCGCCGCCGCTGAAACCTTCACCACCACCCCAAGTGCG
CCCTATGGCCACAGCAGCGGCAGCAGCGGCGGCAGCGCTTGCGCTACGTC
TCTGAGGAGCGTGCTGCGACAGAGCGGCAGCGCGCAGCCGCCACTGTCAG
CGCTGCGCGGTCTGAGCCCGATATCCGTCCGCAGCACTGGCGCGAAAGCG
GCTGGCGCGGGTGCACGGCTCAGGACGCCGTCGTGTCGAGTCAGCAGCGG
AGGCTACGGAGGCGAGTCAAAGTCGGAGTCGGAGGCGTGGGCGGTGGGGG
AGGGGGGGGGTGCTGGCGATGGCGGCGCTATGGACACGGATTCGGAGATT
GAGTTTGCGGGCGTGTTGACACAGGCGGATAACGTTAGCGATGGCGAGGG
CGTGGGAGTGGAGCGTGGGAGGGGAGGCGGAGGAGCAGCGCTGAGAGTGC
AAGGGGGTGAAGAGGGGAGCGGTGCTGACATTGGGGGTCGGGGGCTGGGG
CTGAGGGAGCGGCTGCTGCTGCGCCAGGGGGCTGGGGTGGGGGGAGCAGA
GAGGAGTGCTGCTGCGTGCACGGAGGCAGCGACAGATGCTATCGCAACGC
CAAAGGCGGCAGCAGCGGCGGCGGCGGGGGGGGCGAGGCGTAGGGGCGCT
TCGAAGGCCAGGGACAGGGCGGCTGATGAGGGAGGGGCGGAAGCGGAGCA
GTCGCAAGGCACGCCCAACCGTGCTACGAGTGTTGCTGGTTCAAGCGCCG
GGGCTGGCCGGAGGGGGAAGAAGGCGCCGCAGGGGGGTGGGGGGGGCGGG
GGGACAGCGGATGCGGAGCTGTACGCACGCGGCATGCCTGATTATGGCGC
CATGCCGATTCACGCGCTGAACCGGGCGATGGCAGCGTATGGCCTCAAGC
GAAGGCCCACCGCAGCTGCCATGGCGGCGAAGCTGCGGGAGATTTGGATT
GCGGTGAATGGTGGCAGCGGCGATGCTGAGGATGGTGCGACTGACGTTGC
TATGGGACGCGTGGCACCCCTGCTGACACAGCCGCTTCCGCAGCGTGAGG
CAGATGAGCCCAGGGCACCGCCACCTGCAGGCGGTGACTCTCCACGACAT
CGCCGCTGCAGTGGCGGCCGCGGGCGTCAAGTGCACCAAAGTGTGCCTGC
GCGACTTTCTGGACAGCGAGGGCGTGACGTTTGTAGTGTCAGATGGCGCA
AAAAAGCGCGCTGCTGCTGCTGCAGGCGATGGCAGACCTCCCAAGGCGCG
GCGCTAGCACGTTCTGCCTGCATGCCTGCATACCTTCCGATGATCACAGT
TAGGGCACGAGCTACGCGTGGATGCGCTTGCTATCGCTGTGTAGCTCGCA
GCTGA