Trimin1|353186|estExt_Genemark1.C_Ctg_1480020 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353186
Unique NameTrimin1|353186|estExt_Genemark1.C_Ctg_1480020
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length925
Homology
BLAST of jgi.p|Trimin1|353186 vs. uniprot
Match: A0A835ZBR0_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBR0_9STRA)

HSP 1 Score: 1683 bits (4358), Expect = 0.000e+0
Identity = 924/924 (100.00%), Postives = 924/924 (100.00%), Query Frame = 0
Query:    1 MRPEGRRDARAQNLTAGDNDSDGSSDYNPNALDTEDADDDADSEMEWMGGXXXXXXXXXXXXXXXXXXXXXXXAVCGKRSLSRAGDGEDTLGAQLDAYATELDALICRDVAAWPEARSAQQQRTGLPGKFLRRARGELGGGRGSDSSKFCAAAGQGFLPGHPGARLGPYEDKLFCGKFSMSTHPAALSAAAATAACIGHARRSVSGDVFLSAAQDAQIRLFRASDLYQYTLKNAWVSQGLRPPARSAGAVCPVEEEAVLGAYALLPPLPLXXXXXXXXXXXXXXXXXXXXXXXXPAEQGRPRPYKTIVCRDVGWAVVGTDFSPDDQWLAYSSWSQYVHLCNVQGDYEMHEALDFQSPERGAYSFCLFSIRFSPTNTHLLAGGSDHAVHLYNLERKEVVARLKAHADDVNAVCYLDDGGNVLLSGSDDCSIRVWDIRSSKTKPVGTLCGHDGERYVHRRMQQYRAAPDADPLVAAALHSGVAAAGITCVSARADGRTVASNSKDQTLKLWDARAMAGPGSAVARLPTRQSSWDYRWDIPAAMRAVSAXXXXXXXXXXGGRSCTQGVDQSLKTFSGHRVLQTLIRCNFSPMHTTGQRYIVSGSQCGGVHMWDVLTGRPLQRHPQAHRPNIRRRRYLADADXXXXXXXXXXXXXXXXXXXXXAAWEPPEQAPLHHDAVRDVSWHPHLPLLASSSWDCSVGLWTYKRGACANVICKATLPSRHKVIQDSMAARRVVDEPRKWSEFRDAYANALQAPEPCFRLVPPELLQVAARSSSPLACCTLGDIGDPARVQAAAEQPNWVTSRPYCVKDTRCSSDAEALTLLAQGKSPACVSSTAIGDGKLRFWVPKSEAAADKMLAQLRAGSAISVSMTCIKNAYVTMAAGTCRGCLRLSDVQVCARCKHALYCSKQCQASDWPEHKGQWKTVSS 924
            MRPEGRRDARAQNLTAGDNDSDGSSDYNPNALDTEDADDDADSEMEWMGGXXXXXXXXXXXXXXXXXXXXXXXAVCGKRSLSRAGDGEDTLGAQLDAYATELDALICRDVAAWPEARSAQQQRTGLPGKFLRRARGELGGGRGSDSSKFCAAAGQGFLPGHPGARLGPYEDKLFCGKFSMSTHPAALSAAAATAACIGHARRSVSGDVFLSAAQDAQIRLFRASDLYQYTLKNAWVSQGLRPPARSAGAVCPVEEEAVLGAYALLPPLPLXXXXXXXXXXXXXXXXXXXXXXXXPAEQGRPRPYKTIVCRDVGWAVVGTDFSPDDQWLAYSSWSQYVHLCNVQGDYEMHEALDFQSPERGAYSFCLFSIRFSPTNTHLLAGGSDHAVHLYNLERKEVVARLKAHADDVNAVCYLDDGGNVLLSGSDDCSIRVWDIRSSKTKPVGTLCGHDGERYVHRRMQQYRAAPDADPLVAAALHSGVAAAGITCVSARADGRTVASNSKDQTLKLWDARAMAGPGSAVARLPTRQSSWDYRWDIPAAMRAVSAXXXXXXXXXXGGRSCTQGVDQSLKTFSGHRVLQTLIRCNFSPMHTTGQRYIVSGSQCGGVHMWDVLTGRPLQRHPQAHRPNIRRRRYLADADXXXXXXXXXXXXXXXXXXXXXAAWEPPEQAPLHHDAVRDVSWHPHLPLLASSSWDCSVGLWTYKRGACANVICKATLPSRHKVIQDSMAARRVVDEPRKWSEFRDAYANALQAPEPCFRLVPPELLQVAARSSSPLACCTLGDIGDPARVQAAAEQPNWVTSRPYCVKDTRCSSDAEALTLLAQGKSPACVSSTAIGDGKLRFWVPKSEAAADKMLAQLRAGSAISVSMTCIKNAYVTMAAGTCRGCLRLSDVQVCARCKHALYCSKQCQASDWPEHKGQWKTVSS
Sbjct:    1 MRPEGRRDARAQNLTAGDNDSDGSSDYNPNALDTEDADDDADSEMEWMGGXXXXXXXXXXXXXXXXXXXXXXXAVCGKRSLSRAGDGEDTLGAQLDAYATELDALICRDVAAWPEARSAQQQRTGLPGKFLRRARGELGGGRGSDSSKFCAAAGQGFLPGHPGARLGPYEDKLFCGKFSMSTHPAALSAAAATAACIGHARRSVSGDVFLSAAQDAQIRLFRASDLYQYTLKNAWVSQGLRPPARSAGAVCPVEEEAVLGAYALLPPLPLXXXXXXXXXXXXXXXXXXXXXXXXPAEQGRPRPYKTIVCRDVGWAVVGTDFSPDDQWLAYSSWSQYVHLCNVQGDYEMHEALDFQSPERGAYSFCLFSIRFSPTNTHLLAGGSDHAVHLYNLERKEVVARLKAHADDVNAVCYLDDGGNVLLSGSDDCSIRVWDIRSSKTKPVGTLCGHDGERYVHRRMQQYRAAPDADPLVAAALHSGVAAAGITCVSARADGRTVASNSKDQTLKLWDARAMAGPGSAVARLPTRQSSWDYRWDIPAAMRAVSAXXXXXXXXXXGGRSCTQGVDQSLKTFSGHRVLQTLIRCNFSPMHTTGQRYIVSGSQCGGVHMWDVLTGRPLQRHPQAHRPNIRRRRYLADADXXXXXXXXXXXXXXXXXXXXXAAWEPPEQAPLHHDAVRDVSWHPHLPLLASSSWDCSVGLWTYKRGACANVICKATLPSRHKVIQDSMAARRVVDEPRKWSEFRDAYANALQAPEPCFRLVPPELLQVAARSSSPLACCTLGDIGDPARVQAAAEQPNWVTSRPYCVKDTRCSSDAEALTLLAQGKSPACVSSTAIGDGKLRFWVPKSEAAADKMLAQLRAGSAISVSMTCIKNAYVTMAAGTCRGCLRLSDVQVCARCKHALYCSKQCQASDWPEHKGQWKTVSS 924          
BLAST of jgi.p|Trimin1|353186 vs. uniprot
Match: D8LKU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU7_ECTSI)

HSP 1 Score: 354 bits (909), Expect = 2.410e-107
Identity = 217/560 (38.75%), Postives = 279/560 (49.82%), Query Frame = 0
Query:  151 AAAGQGFLPGHPGARLGPYEDKLFCGKFSMSTHPAALSAAAATAACIGHARRSVSGDVFLSAAQDAQIRLFRASDLYQYTLKNAWVSQGLRP--PARSAGAVCPVEEEAVLGAYALLPPLPLXXXXXXXXXXXXXXXXXXXXXXXXPAEQGRPRPYKTIVCRDVGWAVVGTDFSPDDQWLAYSSWSQYVHLCNVQGDYEMHEALDFQSPERGAYSFCLFSIRFSPTNTHLLAGGSDHAVHLYNLERKEVVARLKAHADDVNAVCYLDDGGNVLLSGSDDCSIRVWDIRSSKTKPVGTLCGHDGERYVHRRMQQYRAAPDADPLVAAALHSGVAAAGITCVSARADGRTVASNSKDQTLKLWDARAMAGPGSAVARLPTRQSSWDYR---WDIPAAMRAVSAXXXXXXXXXXGGRSCTQGVDQSLKTFSGHRVLQTLIRCNFSPMHTTGQRYIVSGSQCGGVHMWDVLTGRPLQRHPQAHRPNIRRRRYLADADXXXXXXXXXXXXXXXXXXXXXAAWEPPEQAPLHHDAVRDVSWHPHLPLLASSSWDCSVGLWTYKRGA 705
            A  G  F+P      LG  + K+FCG+FS S                        GDV L+A+QD+ I L+ +  +Y+++ K+A   +  R   P  + G           GA                                       P+P KTI C D  W+V+ TDFSPD++WLAYSSWS YVHLCN +GDYE+H+ALDFQ P+ G  SFCLF+I+FSP+NTH+L GGSD+ V+LY+LERKE VAR+ AH DDVNAV + D G  V+LSG DDC I++WD+RS     VG LCGH                                 AGITC++A+ DGR   SNSKDQT+KLWD R M  P     +       WDYR     +PA +R + +                +  D+S+KTF GH+VLQTLIRC FSP HTTGQR+++SGS  G V +WD+LTG                   + D+                       +W        H    RDVSWHPHLPL+AS SWD +VGLW+Y  GA
Sbjct:  198 APLGGSFIPNTFCRPLGRSQQKMFCGRFSTS------------------------GDVLLTASQDSVINLYDSESVYRWSAKSADPEENYRDEFPGFTRGMFRSSRRRLWHGA---------------------------------------PKPLKTIRCLDTAWSVISTDFSPDEKWLAYSSWSPYVHLCNTRGDYELHQALDFQ-PKPGD-SFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARISAHDDDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAA-VGGLCGHQ--------------------------------AGITCITAKGDGRHFISNSKDQTMKLWDMRRMLDPKDDKMKKAAHIPHWDYRHMTMSLPA-LRPIKSK---------------RASDESVKTFHGHKVLQTLIRCYFSPTHTTGQRFVMSGSADGSVCIWDILTGN------------------MVDS----------------------LSW--------HTGNTRDVSWHPHLPLIASFSWDAAVGLWSYSGGA 595          
BLAST of jgi.p|Trimin1|353186 vs. uniprot
Match: A0A6H5K2A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A5_9PHAE)

HSP 1 Score: 310 bits (795), Expect = 1.550e-90
Identity = 190/486 (39.09%), Postives = 247/486 (50.82%), Query Frame = 0
Query:  151 AAAGQGFLPGHPGARLGPYEDKLFCGKFSMSTHPAALSAAAATAACIGHARRSVSGDVFLSAAQDAQIRLFRASDLYQYTLKNAWVSQGLRPPARSAGAVCPVEEEAVLGAYALLPPLPLXXXXXXXXXXXXXXXXXXXXXXXXPAEQGRPRPYKTIVCRDVGWAVVGTDFSPDDQWLAYSSWSQYVHLCNVQGDYEMHEALDFQSPERGAYSFCLFSIRFSPTNTHLLAGGSDHAVHLYNLERKEVVARLKAHADDVNAVCYLDDGGNVLLSGSDDCSIRVWDIRSSKTKPVGTLCGHDGERYVHRRMQQYRAAPDADPLVAAALHSGVAAAGITCVSARADGRTVASNSKDQTLKLWDARAMAGPGSAVARLPTRQS----------------------SWDYRWDIPAAMRAVSAXXXXXXXXXXGGRSCTQGVDQSLKTFSGHRVLQTLIRCNFSPMHTTGQRYIVSGSQCGGVHMWDVLTG 614
            A  G  F+P      LG  + K+FCG+FS S                        GDV L+A+QD+ I L+ +  +Y+++ K A   +  R             +E     Y +                                  G P+P KTI C D  W+V+ TDFSPD++WLAYSSWS YVHLCN +GDYE+H+ALDFQ P+ G  SFCLF+I+FSP+NTH+L GGSD  V+LY+LERKE V+R++AH +DVNAV + D G  V+LSG DDC I++WD+RS     VG LCGH                                 AGITC++A+ DGR   SNSKDQT+KLWD R M  P     +  T  S                       WDYR  +P +  A+              +   +  D+S+KTF GH+VLQTLIRC FSP HTTGQR+++SGS  G V +WDVLTG
Sbjct:  262 APLGGSFIPNTFCRPLGRSQQKMFCGRFSTS------------------------GDVLLTASQDSVINLYDSESVYRWSAKPADPEENYR-------------DEFPDFTYHMF------------------------RSSRRRLWHGAPKPLKTIRCLDTAWSVISTDFSPDEKWLAYSSWSPYVHLCNTRGDYELHQALDFQ-PKPGD-SFCLFAIQFSPSNTHILGGGSDKHVYLYSLERKERVSRIRAHDNDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAA-VGGLCGHQ--------------------------------AGITCITAKGDGRHFISNSKDQTMKLWDMRRMLDPKDDKMKKATHTSLWCPSYFVGITCLCVCVVVYVHCWDYR-HMPMSFTALRP------------KKGKRTSDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGSVCIWDVLTG 638          
BLAST of jgi.p|Trimin1|353186 vs. uniprot
Match: C3XUD8_BRAFL (Uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3XUD8_BRAFL)

HSP 1 Score: 258 bits (660), Expect = 1.320e-74
Identity = 155/405 (38.27%), Postives = 198/405 (48.89%), Query Frame = 0
Query:  299 GRPRPYKTIVCRDVGWAVVGTDFSPDDQWLAYSSWSQYVHLCNVQGDYEMHEALDFQSPERGAYSFCLFSIRFSPTNTHLLAGGSDHAVHLYNLERKEVVARLKAHADDVNAVCYLDDGGNVLLSGSDDCSIRVWDIRS-SKTKP--VGTLCGHDGERYVHRRMQQYRAAPDADPLVAAALHSGVAAAGITCVSARADGRTVASNSKDQTLKLWDARAMAGP-GSAVARLPTRQSSWDYRWDIPAAMRAVSAXXXXXXXXXXGGRSCTQGVDQSLKTFSGHRVLQTLIRCNFSPMHTTGQRYIVSGSQCGGVHMWDVLTGRPLQRHPQAHRPNIRRRRYLADADXXXXXXXXXXXXXXXXXXXXXAAWEPPEQAPLHHDAVRDVSWHPHLPLLASSSWDCSVGLW 699
            G+ + ++TI  RDVGW+V+ T FSPD  +L YSSWS  +HLCN+ GDYE H ALD    ER    FC+FS+ FS  N  +L G +D  +++Y+ ER E   R+++H DDVNAV Y DD   +L SG DD   RVWD R  S+  P  VGTL GH                                  GIT + ++AD R + SNSKDQT+KLWD R  + P G   +R      +WDYRW  P   R              G  +     D SL T+ GH VL TL+RC FSP+HTTGQR+I SG   G V ++DVLTG+ +                                                E+   H   VRDVSWHP+ P + S+ WD  VGLW
Sbjct:   45 GKFQEFRTIRARDVGWSVLDTAFSPDGCYLIYSSWSDAIHLCNIYGDYETHIALDLNPSER---RFCIFSLTFSSDNKEVLGGANDGCLYIYDRERNERTLRIESHEDDVNAVAYADDSSQILYSGGDDGLCRVWDRRMLSENSPNAVGTLAGHSD--------------------------------GITFIDSKADARHLISNSKDQTIKLWDIRKFSPPEGLEASRRAVANQNWDYRWQ-PVPKR--------------GRYNARLAGDTSLMTYRGHGVLHTLVRCRFSPVHTTGQRFIYSGCSTGSVVVYDVLTGQIV------------------------------------------------EKLRGHKACVRDVSWHPYEPKIMSTGWDGIVGLW 351          
BLAST of jgi.p|Trimin1|353186 vs. uniprot
Match: A0A6P4ZES3_BRABE (DDB1- and CUL4-associated factor 11-like isoform X1 n=23 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZES3_BRABE)

HSP 1 Score: 265 bits (676), Expect = 3.590e-74
Identity = 155/410 (37.80%), Postives = 203/410 (49.51%), Query Frame = 0
Query:  299 GRPRPYKTIVCRDVGWAVVGTDFSPDDQWLAYSSWSQYVHLCNVQGDYEMHEALDFQSPERGAYSFCLFSIRFSPTNTHLLAGGSDHAVHLYNLERKEVVARLKAHADDVNAVCYLDDGGNVLLSGSDDCSIRVWDIRS-SKTKP--VGTLCGHDGERYVHRRMQQYRAAPDADPLVAAALHSGVAAAGITCVSARADGRTVASNSKDQTLKLWDARAMAGP-GSAVARLPTRQSSWDYRWD-IPAAMRAVSAXXXXXXXXXXGGRSCTQGVDQSLKTFSGHRVLQTLIRCNFSPMHTTGQRYIVSGSQCGGVHMWDVLTGRPLQRHPQAHRPNIRRRRYLADADXXXXXXXXXXXXXXXXXXXXXAAWEPPEQAPLHHDAVRDVSWHPHLPLLASSSWDCSVGLWTYKR 703
            G+ + ++TI  RDVGW+V+ T FSPD  +L YSSWS  +HLCN+ GDYE H ALD    ER    FC+FS+ FS  N  +L G +D  +++Y+ ER E   R+++H DDVNAV Y DD   +L SG DD   RVWD R  S+  P  VGTL GH                                  GIT + +++D R + SNSKDQT+KLWD R  + P G   +R      +WDYRW  +P  +R  SA                   D SL T+ GH VL TL+RC FSP+HTTGQR+I SG   G V ++DVLTG+ +                                                E+   H   VRDVSWHP+ P + S+ WD  +GLW ++R
Sbjct:  231 GKFQEFRTIRARDVGWSVLDTAFSPDGCYLIYSSWSDAIHLCNIYGDYETHIALDLNPSER---RFCIFSLTFSSDNKEVLGGANDGCLYIYDRERNERTLRIESHEDDVNAVAYADDSSQILYSGGDDGLCRVWDRRMLSENNPNAVGTLAGHSD--------------------------------GITFIDSKSDARHLISNSKDQTIKLWDVRKFSPPEGLEASRRAVANQNWDYRWQPVPKRVRTSSARLAG---------------DTSLMTYRGHGVLHTLVRCRFSPVHTTGQRFIYSGCSTGSVVVYDVLTGKIV------------------------------------------------EKLRGHKACVRDVSWHPYEPKIMSTGWDGVLGLWEWRR 542          
BLAST of jgi.p|Trimin1|353186 vs. uniprot
Match: UPI00077A1D94 (DDB1- and CUL4-associated factor 11-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A1D94)

HSP 1 Score: 252 bits (643), Expect = 4.280e-70
Identity = 149/409 (36.43%), Postives = 195/409 (47.68%), Query Frame = 0
Query:  299 GRPRPYKTIVCRDVGWAVVGTDFSPDDQWLAYSSWSQYVHLCNVQGDYEMHEALDFQSPERGAYSFCLFSIRFSPTNTHLLAGGSDHAVHLYNLERKEVVARLKAHADDVNAVCYLDDGGNVLLSGSDDCSIRVWDIR---SSKTKPVGTLCGHDGERYVHRRMQQYRAAPDADPLVAAALHSGVAAAGITCVSARADGRTVASNSKDQTLKLWDARAMA-GPGSAVARLPTRQSSWDYRWDIPAAMRAVSAXXXXXXXXXXGGRSCTQGVDQSLKTFSGHRVLQTLIRCNFSPMHTTGQRYIVSGSQCGGVHMWDVLTGRPLQRHPQAHRPNIRRRRYLADADXXXXXXXXXXXXXXXXXXXXXAAWEPPEQAPLHHDAVRDVSWHPHLPLLASSSWDCSVGLWTYKR 703
            G+ + ++ I  RDVGW+++ TD+SPD Q+L YSSWS YVHLCN+ GDYE H AL     E     FC FSI+FS  N  +LAG +D  +++Y+    +   R+ AH D +N V + D    +LLS +DD   +VWD R    S   PVG   GH                                A GIT +  R DGR + +NSKDQT+KLWD R  +   G    +    +  WDYRW  P   +++              R      D SL T+ GH VL TLIRC FSP+HTTGQRYI SG   G + ++D LTG+ + R              LA                                   H   VRDVSWHP+ P + S+SWD  +GLW+YKR
Sbjct:  196 GQFKLFRDIRARDVGWSIIDTDYSPDQQYLIYSSWSNYVHLCNIYGDYETHSALCLSPMES---RFCAFSIKFSHDNKEILAGANDSCLYVYDRGSDQQTLRILAHEDGINCVKFADTSSQILLSAADDGLCKVWDRRVLDESVHSPVGVFAGH--------------------------------ADGITYIDPRGDGRHLITNSKDQTIKLWDMRKFSDSEGVTATKQAVAKQRWDYRWQ-PVPRKSL--------------RQAKLPGDSSLMTYRGHSVLHTLIRCYFSPLHTTGQRYIYSGCSTGSIVIYDALTGKVVSR--------------LAG----------------------------------HGSTVRDVSWHPYQPEIVSTSWDGVLGLWSYKR 506          
BLAST of jgi.p|Trimin1|353186 vs. uniprot
Match: UPI0009E59638 (DDB1- and CUL4-associated factor 11-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E59638)

HSP 1 Score: 251 bits (641), Expect = 1.040e-69
Identity = 151/409 (36.92%), Postives = 196/409 (47.92%), Query Frame = 0
Query:  299 GRPRPYKTIVCRDVGWAVVGTDFSPDDQWLAYSSWSQYVHLCNVQGDYEMHEALDFQSPERGAYSFCLFSIRFSPTNTHLLAGGSDHAVHLYNLERKEVVARLKAHADDVNAVCYLDDGGNVLLSGSDDCSIRVWDIRS---SKTKPVGTLCGHDGERYVHRRMQQYRAAPDADPLVAAALHSGVAAAGITCVSARADGRTVASNSKDQTLKLWDARAMAGP-GSAVARLPTRQSSWDYRWDIPAAMRAVSAXXXXXXXXXXGGRSCTQGVDQSLKTFSGHRVLQTLIRCNFSPMHTTGQRYIVSGSQCGGVHMWDVLTGRPLQRHPQAHRPNIRRRRYLADADXXXXXXXXXXXXXXXXXXXXXAAWEPPEQAPLHHDAVRDVSWHPHLPLLASSSWDCSVGLWTYKR 703
            G+ + ++ IV RDV W+++ TD+SPD Q+L YSSWS YVHLCN+ GDYE H AL   + +     FC FSI+FS  N  +LAG +D ++++Y+    +   R+  H DD+NAV + D   ++L SG DD   +VWD R    S   PVG L GH                                A GIT +  R DGR + +NSKDQ +KLWD R  +   G    +       WDYRW  P   ++V              RS   G D SL T+ GH VL TL+RC FSPMHTTGQRYI SG   G V ++D LTG+   R                                                   H  AVRDVSWHP+   + S+SWD ++GLW YKR
Sbjct:  206 GQFKVFRNIVARDVEWSIIDTDYSPDQQYLIYSSWSDYVHLCNIYGDYETHTALCLNTEDS---RFCAFSIKFSHDNKEILAGANDASLYVYDRGSNQRTLRVHGHEDDINAVAFADASSHILFSGGDDGLCKVWDRRQLVESCPCPVGVLAGH--------------------------------ADGITHIDPRGDGRHLITNSKDQAIKLWDMRKFSDEEGICATKRAVAGQRWDYRWQ-PVPRKSVR-------------RSRLDG-DSSLMTYRGHSVLHTLVRCYFSPMHTTGQRYIYSGCSTGSVVIYDGLTGKITSRLTG------------------------------------------------HRQAVRDVSWHPYENEIVSTSWDGTLGLWRYKR 516          
BLAST of jgi.p|Trimin1|353186 vs. uniprot
Match: A0A1Y1IN90_KLENI (WD-40 repeat protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IN90_KLENI)

HSP 1 Score: 242 bits (618), Expect = 4.680e-69
Identity = 141/406 (34.73%), Postives = 200/406 (49.26%), Query Frame = 0
Query:  304 YKTIVCRDVGWAVVGTDFSPDDQWLAYSSWSQYVHLCNVQGDYEMHEALDFQSPERGAYSFCLFSIRFSPTNTHLLAGGSDHAVHLYNLERKEVVARLKAHADDVNAVCYLDDGGNVLLSGSDDCSIRVWD---IRSSKTKPVGTLCGHDGERYVHRRMQQYRAAPDADPLVAAALHSGVAAAGITCVSARADGRTVASNSKDQTLKLWDARAMAGPGSA-VARLPTRQSSWDYRWDIPAAMRAVSAXXXXXXXXXXGGRSCTQGVDQSLKTFSGHRVLQTLIRCNFSPMHTTGQRYIVSGSQCGGVHMWDVLTGRPLQRHPQAHRPNIRRRRYLADADXXXXXXXXXXXXXXXXXXXXXAAWEPPEQAPLHHDAVRDVSWHPHLPLLASSSWDCSVGLWTYKRGA 705
            +K +V RDVGW++V TDFSPD + + YSSWS +VH+CNV  ++E+HEALDF+   R    FCLFSI+                 ++Y++E K+    + AH DDVN+VC+ +D  ++  S SDD   +VWD   ++      VG L GH                                  GIT V+++ DGR + +NSKDQ++KLWD R M  P       +P R+  WDYRW+  +                     C    D SL+T+ GHRVLQTL+R  FSP+ +TGQRYI +GS  G V+++DV++G  +++              L+                                   H   VRDV+WHP LPLLA+SSWDC+VG+W + R +
Sbjct:   23 FKDVVARDVGWSIVDTDFSPDQRMIIYSSWSNFVHICNVAAEFELHEALDFRPESR---HFCLFSIKXXXXXXXXXXXXXXXXXYIYDIETKKPTLVVDAHTDDVNSVCFAEDSPSMFYSASDDGICKVWDRRLLKGGSNDAVGVLVGHSE--------------------------------GITHVNSKGDGRYLLTNSKDQSIKLWDIRRMTNPSKIDKGHVPARRY-WDYRWEDHSPRNHQGP--------------CKN--DTSLQTYRGHRVLQTLVRAYFSPVESTGQRYIYTGSTDGTVYIYDVVSGETVRK--------------LSG----------------------------------HFATVRDVAWHPTLPLLATSSWDCTVGVWEHHRAS 328          
BLAST of jgi.p|Trimin1|353186 vs. uniprot
Match: A0A1S3JK10_LINUN (DDB1- and CUL4-associated factor 11 isoform X2 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JK10_LINUN)

HSP 1 Score: 244 bits (624), Expect = 6.150e-68
Identity = 151/407 (37.10%), Postives = 203/407 (49.88%), Query Frame = 0
Query:  305 KTIVCRDVGWAVVGTDFSPDDQWLAYSSWSQYVHLCNVQGDYEMHEALDFQSPERGAYSFCLFSIRFSPTNTHLLAGGSDHAVHLYNLERKEVVARLKAHADDVNAVCYLDDGGNVLLSGSDDCSIRVWDIRS---SKTKPVGTLCGHDGERYVHRRMQQYRAAPDADPLVAAALHSGVAAAGITCVSARADGRTVASNSKDQTLKLWDAR------AMAGPGSAVARLPTRQSSWDYRWD-IPAAMRAVSAXXXXXXXXXXGGRSCTQGVDQSLKTFSGHRVLQTLIRCNFSPMHTTGQRYIVSGSQCGGVHMWDVLTGRPLQRHPQAHRPNIRRRRYLADADXXXXXXXXXXXXXXXXXXXXXAAWEPPEQAPLHHDAVRDVSWHPHLPLLASSSWDCSVGLWTY 701
            K++  RDVGW+VV T FSPD  +L YSSWS  +HLCN+ G++E+HEAL    P+ G +SFC FSI FS  N  +LAG +D  +++Y+ E  +   ++ AH DDVN+V + D   ++L SG DD  ++VWD R+   +   PVGTL GH                                  GIT + ++ D R + SNSKDQ++KLWD R      A+ G   AVAR      +WDYRW  +PA ++ V                  +G D SL T+ GH VL +LIR  FSP +TTGQRYI +G   GGV ++DVLTG+ + R                D                                  H   VRDVSWHP+   + S+SWD S+G WTY
Sbjct:  139 KSVRARDVGWSVVDTAFSPDGNYLIYSSWSDCIHLCNIHGEHEVHEALHL-FPDAG-HSFCAFSIVFSADNKEILAGSNDGGLYVYDRESNQRCLKITAHEDDVNSVAFADTSSHILFSGGDDGLVKVWDRRTLSEATPVPVGTLAGHSD--------------------------------GITFIDSKNDSRYLLSNSKDQSIKLWDMRKFSSDDAIRGTKRAVAR-----QNWDYRWPPVPARVKKVKH---------------VEG-DSSLMTYRGHSVLHSLIRARFSPAYTTGQRYIYTGCASGGVVVYDVLTGKVVSR---------------LDG---------------------------------HRGCVRDVSWHPYEHTIISTSWDGSLGKWTY 442          
BLAST of jgi.p|Trimin1|353186 vs. uniprot
Match: V3ZF55_LOTGI (Uncharacterized protein (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZF55_LOTGI)

HSP 1 Score: 241 bits (616), Expect = 2.100e-67
Identity = 140/403 (34.74%), Postives = 200/403 (49.63%), Query Frame = 0
Query:  304 YKTIVCRDVGWAVVGTDFSPDDQWLAYSSWSQYVHLCNVQGDYEMHEALDFQSPERGAYSFCLFSIRFSPTNTHLLAGGSDHAVHLYNLERKEVVARLKAHADDVNAVCYLDDGGNVLLSGSDDCSIRVWD---IRSSKTKPVGTLCGHDGERYVHRRMQQYRAAPDADPLVAAALHSGVAAAGITCVSARADGRTVASNSKDQTLKLWDARAMAG-PGSAVARLPTRQSSWDYRWD-IPAAMRAVSAXXXXXXXXXXGGRSCTQGVDQSLKTFSGHRVLQTLIRCNFSPMHTTGQRYIVSGSQCGGVHMWDVLTGRPLQRHPQAHRPNIRRRRYLADADXXXXXXXXXXXXXXXXXXXXXAAWEPPEQAPLHHDAVRDVSWHPHLPLLASSSWDCSVGLWTY 701
            YK+I  RDVGW+V+ T FSPD  ++ YSSWS  +HLC++ GD+++HEAL+      G +SFC+FS+ FS  NT +L G +D  +++Y+ E  +   ++++H DDVNAV + DD   +L SG DD  +RVWD   +R     PVGT  GH                                  GIT + ++ D R + SNSKDQT+KLWD R+ +G  G    +       WDYRW  +P   R V              ++   G D S+ T+ GH VL TLIRC+FSP ++TGQRY+ +G   G V ++D+LTG  +++  +                                                H   VRDVSWHP+   L S+SWD ++GLW +
Sbjct:   74 YKSIRARDVGWSVLDTAFSPDGNYVIYSSWSDSIHLCSIHGDHDVHEALNLTP---GEHSFCIFSLTFSSDNTEILGGANDGCLYVYDRESNQRKLKIESHDDDVNAVAFADDNSQILYSGGDDGILRVWDRRTLREDHPVPVGTFAGHRD--------------------------------GITYIDSKGDARYLLSNSKDQTIKLWDIRSFSGNDGVEATKRAVSAQKWDYRWQQVP---RKVP-------------KNILPG-DTSVMTYKGHCVLHTLIRCHFSPEYSTGQRYVYTGCATGSVIIYDLLTGAVVKKLDK------------------------------------------------HSACVRDVSWHPYYNKLISTSWDGTLGLWEH 376          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353186 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZBR0_9STRA0.000e+0100.00WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
D8LKU7_ECTSI2.410e-10738.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K2A5_9PHAE1.550e-9039.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
C3XUD8_BRAFL1.320e-7438.27Uncharacterized protein (Fragment) n=1 Tax=Branchi... [more]
A0A6P4ZES3_BRABE3.590e-7437.80DDB1- and CUL4-associated factor 11-like isoform X... [more]
UPI00077A1D944.280e-7036.43DDB1- and CUL4-associated factor 11-like n=1 Tax=A... [more]
UPI0009E596381.040e-6936.92DDB1- and CUL4-associated factor 11-like n=1 Tax=O... [more]
A0A1Y1IN90_KLENI4.680e-6934.73WD-40 repeat protein n=1 Tax=Klebsormidium nitens ... [more]
A0A1S3JK10_LINUN6.150e-6837.10DDB1- and CUL4-associated factor 11 isoform X2 n=2... [more]
V3ZF55_LOTGI2.100e-6734.74Uncharacterized protein (Fragment) n=1 Tax=Lottia ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 421..435
score: 43.12
coord: 497..511
score: 39.4
coord: 597..611
score: 29.94
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 467..510
e-value: 0.091
score: 21.9
coord: 565..610
e-value: 2.0
score: 15.2
coord: 661..700
e-value: 0.0015
score: 27.8
coord: 394..434
e-value: 8.7E-10
score: 48.5
coord: 300..341
e-value: 44.0
score: 6.6
coord: 347..391
e-value: 5.5
score: 12.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 672..699
e-value: 0.0052
score: 17.6
coord: 483..510
e-value: 0.025
score: 15.5
coord: 398..434
e-value: 6.2E-6
score: 26.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 401..443
score: 14.585471
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 668..709
score: 10.34136
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 485..510
score: 9.439068
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 314..649
e-value: 7.8E-43
score: 148.6
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 666..745
e-value: 2.3E-7
score: 31.9
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 882..916
e-value: 2.7E-8
score: 33.8
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 882..916
score: 10.375489
NoneNo IPR availableGENE3D6.10.140.2220coord: 875..920
e-value: 2.5E-9
score: 38.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 617..674
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..68
NoneNo IPR availablePANTHERPTHR19847DDB1- AND CUL4-ASSOCIATED FACTOR 11coord: 20..703
NoneNo IPR availablePANTHERPTHR19847:SF7DDB1- AND CUL4-ASSOCIATED FACTOR 11coord: 20..703
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 401..439
score: 11.629227
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 876..916
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 421..435
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 202..713

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_148contigContig_148:124941..139847 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353186mRNA_14536Tribonema minus UTEX_B_3156 mRNAContig_148 124941..139847 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353186|estExt_Genemark1.C_Ctg_1480020 ID=Trimin1|353186|estExt_Genemark1.C_Ctg_1480020|Name=jgi.p|Trimin1|353186|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=925bp
MRPEGRRDARAQNLTAGDNDSDGSSDYNPNALDTEDADDDADSEMEWMGG
GDDSSSAGGNSGRRGSGGGGGAAAVCGKRSLSRAGDGEDTLGAQLDAYAT
ELDALICRDVAAWPEARSAQQQRTGLPGKFLRRARGELGGGRGSDSSKFC
AAAGQGFLPGHPGARLGPYEDKLFCGKFSMSTHPAALSAAAATAACIGHA
RRSVSGDVFLSAAQDAQIRLFRASDLYQYTLKNAWVSQGLRPPARSAGAV
CPVEEEAVLGAYALLPPLPLLLLLLLLLLLLLLHRARRGGGGGGPAEQGR
PRPYKTIVCRDVGWAVVGTDFSPDDQWLAYSSWSQYVHLCNVQGDYEMHE
ALDFQSPERGAYSFCLFSIRFSPTNTHLLAGGSDHAVHLYNLERKEVVAR
LKAHADDVNAVCYLDDGGNVLLSGSDDCSIRVWDIRSSKTKPVGTLCGHD
GERYVHRRMQQYRAAPDADPLVAAALHSGVAAAGITCVSARADGRTVASN
SKDQTLKLWDARAMAGPGSAVARLPTRQSSWDYRWDIPAAMRAVSAAAAA
ASSKRRGGRSCTQGVDQSLKTFSGHRVLQTLIRCNFSPMHTTGQRYIVSG
SQCGGVHMWDVLTGRPLQRHPQAHRPNIRRRRYLADADDEDDAASAAAQQ
QQQAPAAAGAAWEPPEQAPLHHDAVRDVSWHPHLPLLASSSWDCSVGLWT
YKRGACANVICKATLPSRHKVIQDSMAARRVVDEPRKWSEFRDAYANALQ
APEPCFRLVPPELLQVAARSSSPLACCTLGDIGDPARVQAAAEQPNWVTS
RPYCVKDTRCSSDAEALTLLAQGKSPACVSSTAIGDGKLRFWVPKSEAAA
DKMLAQLRAGSAISVSMTCIKNAYVTMAAGTCRGCLRLSDVQVCARCKHA
LYCSKQCQASDWPEHKGQWKTVSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR002893Znf_MYND
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf