Trimin1|353182|estExt_Genemark1.C_Ctg_1480009 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353182
Unique NameTrimin1|353182|estExt_Genemark1.C_Ctg_1480009
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length91
Homology
BLAST of jgi.p|Trimin1|353182 vs. uniprot
Match: A0A835ZB80_9STRA (Telomere-capping, CST complex subunit-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB80_9STRA)

HSP 1 Score: 176 bits (447), Expect = 4.860e-56
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
Query:    1 MHFNAATRVATLQHGTCTLAVDATLLPEFDFRIGSLFEFIGTVQVAGLERRVAARAHRNVDGLDMALYENVLRVRRAFLRTLSSEGGRAS 90
            MHFNAATRVATLQHGTCTLAVDATLLPEFDFRIGSLFEFIGTVQVAGLERRVAARAHRNVDGLDMALYENVLRVRRAFLRTLSSEGGRAS
Sbjct:    1 MHFNAATRVATLQHGTCTLAVDATLLPEFDFRIGSLFEFIGTVQVAGLERRVAARAHRNVDGLDMALYENVLRVRRAFLRTLSSEGGRAS 90          
BLAST of jgi.p|Trimin1|353182 vs. uniprot
Match: W4H842_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H842_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 7.210e-11
Identity = 32/79 (40.51%), Postives = 48/79 (60.76%), Query Frame = 0
Query:    3 FNAATRVATLQHGTCTLAVDATLLPEFDFRIGSLFEFIGTVQVAGLERRVAARAHRNVDGLDMALYENVLRVRRAFLRT 81
            ++AA  +A+L      + V   LL  FDF IGSL++FIG       + ++ AR  RNVDGLD  L+ + L++RR F++T
Sbjct:   32 YDAAKSIASLSFQNAVIVVATDLLVNFDFAIGSLYQFIGETYANEGKMQLRARVGRNVDGLDTQLFVDALKLRREFIKT 110          
BLAST of jgi.p|Trimin1|353182 vs. uniprot
Match: D8RL68_SELML (Uncharacterized protein (Fragment) n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RL68_SELML)

HSP 1 Score: 62.0 bits (149), Expect = 1.820e-10
Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 0
Query:    3 FNAATRVATLQHGTCTLAVDATLLPEFDFRIGSLFEFIGTVQVA-GLERRVAARAHRNVDGLDMALYENVLRVRRAF 78
            F+  + VA ++H    LAVD TLL +   R GSL++FIG + +  G+  R  AR  RNVDGLD+ LYE  LR+RR F
Sbjct:   34 FDVESGVAHIRHEGAKLAVDTTLLRDIHLRPGSLYQFIGELLLQNGMMLR--ARVARNVDGLDVKLYEKALRLRRIF 108          
BLAST of jgi.p|Trimin1|353182 vs. uniprot
Match: A0A485LP17_9STRA (Aste57867_23900 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LP17_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 4.080e-10
Identity = 30/79 (37.97%), Postives = 48/79 (60.76%), Query Frame = 0
Query:    3 FNAATRVATLQHGTCTLAVDATLLPEFDFRIGSLFEFIGTVQVAGLERRVAARAHRNVDGLDMALYENVLRVRRAFLRT 81
            ++A   +A L     T+ V   LL  FDF IGS+++FIG       + ++ AR  RNVDGLD+ ++ + L++RR F++T
Sbjct:   32 YDANKSLAALSFQNATIVVSTELLVNFDFMIGSMYQFIGETYAHEGKLQLRARVGRNVDGLDIQMFTDALKLRRDFIKT 110          
BLAST of jgi.p|Trimin1|353182 vs. uniprot
Match: A0A6G0XY99_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XY99_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 4.080e-10
Identity = 31/79 (39.24%), Postives = 49/79 (62.03%), Query Frame = 0
Query:    3 FNAATRVATLQHGTCTLAVDATLLPEFDFRIGSLFEFIGTVQVAGLERRVAARAHRNVDGLDMALYENVLRVRRAFLRT 81
            +NA   +AT+     T+ V   LL  F+F IGSL++FIG       + ++ AR  RNVDGLD+ ++ + L++RR F++T
Sbjct:   32 YNANKAMATITFQNSTIVVSTELLVNFEFVIGSLYQFIGETYSDEGKLQLRARVGRNVDGLDIQMFMDALKLRREFIKT 110          
BLAST of jgi.p|Trimin1|353182 vs. uniprot
Match: A0A024UV78_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UV78_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 5.770e-10
Identity = 31/79 (39.24%), Postives = 48/79 (60.76%), Query Frame = 0
Query:    3 FNAATRVATLQHGTCTLAVDATLLPEFDFRIGSLFEFIGTVQVAGLERRVAARAHRNVDGLDMALYENVLRVRRAFLRT 81
            ++A+  +ATL      + V   LL  FDF +GSL++FIG       + ++ AR  RNVDGLD  L+ + L++RR F++T
Sbjct:   32 YDASKCLATLSFQNSVIVVATDLLVNFDFAVGSLYQFIGETYTNEGKMQLRARVGRNVDGLDTQLFLDALKLRREFIKT 110          
BLAST of jgi.p|Trimin1|353182 vs. uniprot
Match: A0A1V9YY36_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YY36_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.150e-9
Identity = 29/79 (36.71%), Postives = 48/79 (60.76%), Query Frame = 0
Query:    3 FNAATRVATLQHGTCTLAVDATLLPEFDFRIGSLFEFIGTVQVAGLERRVAARAHRNVDGLDMALYENVLRVRRAFLRT 81
            F+A+ R A++     ++ V   LL   +  +GSL++FIG       E R+ AR  RNVDGLD+ ++ + L++RR F++T
Sbjct:   32 FDASQRTASISFQNSSMKVTTELLSNVELNLGSLYQFIGETYEQNGELRLKARIGRNVDGLDIQMFLDALKIRREFIKT 110          
BLAST of jgi.p|Trimin1|353182 vs. uniprot
Match: A0A2K1IND3_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IND3_PHYPA)

HSP 1 Score: 59.7 bits (143), Expect = 1.940e-9
Identity = 32/77 (41.56%), Postives = 49/77 (63.64%), Query Frame = 0
Query:    3 FNAATRVATLQHGTCTLAVDATLLPEFDFRIGSLFEFIGTVQVAGLER-RVAARAHRNVDGLDMALYENVLRVRRAF 78
            F++ + +A L     +L +D   L E   R+GSLFEFIG ++V   ++  + AR  RNVDG+DM L++ VL++RR F
Sbjct:   39 FDSTSGIAVLVDAGASLRLDLEHLRELPLRVGSLFEFIGELEVDTTQQLTLKARVGRNVDGMDMKLFDKVLQLRRRF 115          
BLAST of jgi.p|Trimin1|353182 vs. uniprot
Match: A0A804Q449_MAIZE (Uncharacterized protein n=2 Tax=Zea mays TaxID=4577 RepID=A0A804Q449_MAIZE)

HSP 1 Score: 59.3 bits (142), Expect = 3.760e-9
Identity = 31/75 (41.33%), Postives = 47/75 (62.67%), Query Frame = 0
Query:    3 FNAATRVATLQHGTCTLAVDATLLPEFDFRIGSLFEFIGTVQVAGLERRVA-ARAHRNVDGLDMALYENVLRVRR 76
            F+  +  AT+Q G+ +L VD   L +  FR  S+++FIG +Q+  ++  +  AR  RNVDGLDM LY+  L +RR
Sbjct:   51 FDVESATATIQDGSVSLKVDTQHLRDVSFRTNSVYQFIGELQIREVDDAILLARIGRNVDGLDMNLYQQALLIRR 125          
BLAST of jgi.p|Trimin1|353182 vs. uniprot
Match: A0A4P9WP25_9FUNG (Telomere-capping, CST complex subunit-domain-containing protein n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WP25_9FUNG)

HSP 1 Score: 58.5 bits (140), Expect = 6.480e-9
Identity = 33/81 (40.74%), Postives = 47/81 (58.02%), Query Frame = 0
Query:    3 FNAATRVATLQHGTCTLAVDATLLPEFDFRIGSLFEFIGTVQ-----VAGLERRVAARAHRNVDGLDMALYENVLRVRRAF 78
            ++  T +A ++HG   L VD TLL +F  R+ SL +FIG ++       G    + AR  RNVDGLD+ L+E  L +RR F
Sbjct:   39 YDVPTNIAVIEHGGERLLVDVTLLGDFPHRLKSLLQFIGELEDHAPHAGGGSVVLRARIVRNVDGLDLKLFEQSLLIRRRF 119          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353182 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZB80_9STRA4.860e-56100.00Telomere-capping, CST complex subunit-domain-conta... [more]
W4H842_9STRA7.210e-1140.51Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
D8RL68_SELML1.820e-1048.05Uncharacterized protein (Fragment) n=3 Tax=Selagin... [more]
A0A485LP17_9STRA4.080e-1037.97Aste57867_23900 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0XY99_9STRA4.080e-1039.24Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024UV78_9STRA5.770e-1039.24Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A1V9YY36_9STRA1.150e-936.71Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A2K1IND3_PHYPA1.940e-941.56Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
A0A804Q449_MAIZE3.760e-941.33Uncharacterized protein n=2 Tax=Zea mays TaxID=457... [more]
A0A4P9WP25_9FUNG6.480e-940.74Telomere-capping, CST complex subunit-domain-conta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029146CST complex subunit Ten1, animal and plant typePFAMPF15490Ten1_2coord: 2..80
e-value: 1.1E-16
score: 60.5
IPR029146CST complex subunit Ten1, animal and plant typePANTHERPTHR33905CST COMPLEX SUBUNIT TEN1coord: 3..81
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 1..84
e-value: 1.2E-19
score: 72.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_148contigContig_148:55869..56940 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353182mRNA_14527Tribonema minus UTEX_B_3156 mRNAContig_148 55761..56940 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353182|estExt_Genemark1.C_Ctg_1480009 ID=Trimin1|353182|estExt_Genemark1.C_Ctg_1480009|Name=jgi.p|Trimin1|353182|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=91bp
MHFNAATRVATLQHGTCTLAVDATLLPEFDFRIGSLFEFIGTVQVAGLER
RVAARAHRNVDGLDMALYENVLRVRRAFLRTLSSEGGRAS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029146Ten1_animal_plant
IPR012340NA-bd_OB-fold