Trimin1|353151|estExt_Genemark1.C_Ctg_1460025 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|353151
Unique Name	Trimin1\|353151\|estExt_Genemark1.C_Ctg_1460025
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	576

Homology

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BLAST of jgi.p|Trimin1|353151 vs. uniprot
Match: A0A835ZF57_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF57_9STRA)

HSP 1 Score: 690 bits (1780), Expect = 2.750e-243
Identity = 575/575 (100.00%), Postives = 575/575 (100.00%), Query Frame = 0

Query:    1 MVQLRPGGSPLNENLSWLAAEGGHLELLQWARANGGAWDEQTCSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARHGVTALEAQGHNGNSEGGMRARSVMDMLAEEEEEHQLREAFGGHTSLGHIHWQEQQGREAEARAAXXXXXXXXXXXXXXXXXSGGQRGIGAXXXXXXXXXKGGGLTGTDRLVRRGGARGPWGLITGAVDVDLFEAAKASDMEACEAALAAGADLNFNRHNGGSLLAWKGWRLKIGGIEWGLQEWDAPIGVVPVTGDTILMIALKCDMQKLAAWVVARPEYKPEVKNADSKTAEDVARDYGRSHFLTGGEAGTPAGGAAQESTPGALVKQAPATSAAAANAAAPPRLPAREHMRVFSEGSTTAQMDHALLRAKDAQIAVPAXXXXXXXXXXXXXXXXXXXXXIAELQAALARATLDRQKSESEALDLRTRIVILESSLKSTKPAWMKKSTSLAA 575
            MVQLRPGGSPLNENLSWLAAEGGHLELLQWARANGGAWDEQTCSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARHGVTALEAQGHNGNSEGGMRARSVMDMLAEEEEEHQLREAFGGHTSLGHIHWQEQQGREAEARAAXXXXXXXXXXXXXXXXXSGGQRGIGAXXXXXXXXXKGGGLTGTDRLVRRGGARGPWGLITGAVDVDLFEAAKASDMEACEAALAAGADLNFNRHNGGSLLAWKGWRLKIGGIEWGLQEWDAPIGVVPVTGDTILMIALKCDMQKLAAWVVARPEYKPEVKNADSKTAEDVARDYGRSHFLTGGEAGTPAGGAAQESTPGALVKQAPATSAAAANAAAPPRLPAREHMRVFSEGSTTAQMDHALLRAKDAQIAVPAXXXXXXXXXXXXXXXXXXXXXIAELQAALARATLDRQKSESEALDLRTRIVILESSLKSTKPAWMKKSTSLAA
Sbjct:    1 MVQLRPGGSPLNENLSWLAAEGGHLELLQWARANGGAWDEQTCSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARHGVTALEAQGHNGNSEGGMRARSVMDMLAEEEEEHQLREAFGGHTSLGHIHWQEQQGREAEARAAXXXXXXXXXXXXXXXXXSGGQRGIGAXXXXXXXXXKGGGLTGTDRLVRRGGARGPWGLITGAVDVDLFEAAKASDMEACEAALAAGADLNFNRHNGGSLLAWKGWRLKIGGIEWGLQEWDAPIGVVPVTGDTILMIALKCDMQKLAAWVVARPEYKPEVKNADSKTAEDVARDYGRSHFLTGGEAGTPAGGAAQESTPGALVKQAPATSAAAANAAAPPRLPAREHMRVFSEGSTTAQMDHALLRAKDAQIAVPAXXXXXXXXXXXXXXXXXXXXXIAELQAALARATLDRQKSESEALDLRTRIVILESSLKSTKPAWMKKSTSLAA 575

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353151 vs. uniprot

BLAST of jgi.p|Trimin1|353151 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835ZF57_9STRA	2.750e-243	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 524..544
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 430..452
None	No IPR available	PANTHER	PTHR46586	ANKYRIN REPEAT-CONTAINING PROTEIN	coord: 15..267
None	No IPR available	PANTHER	PTHR46586:SF3	ANKYRIN REPEAT-CONTAINING PROTEIN	coord: 15..267
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 94..428 e-value: 4.3E-8 score: 34.6
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 47..424

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_146	contig	Contig_146:214715..225039 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353151	mRNA_16148	Tribonema minus UTEX_B_3156	mRNA	Contig_146 214715..225420 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|353151|estExt_Genemark1.C_Ctg_1460025 ID=Trimin1|353151|estExt_Genemark1.C_Ctg_1460025|Name=jgi.p|Trimin1|353151|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=576bp
MVQLRPGGSPLNENLSWLAAEGGHLELLQWARANGGAWDEQTCSCAAGKG
HLELLQWARANECPWNEQTCSCAAAGGHLELLQWARANAYPWDVETCSCA
AAGGHLGLLQWARANGCPWDEQTCSCASGGGHLELLQWARANGCTWHEQT
CTAAARAGHFDVLQWARANECPWDEQTCTGARHGVTALEAQGHNGNSEGG
MRARSVMDMLAEEEEEHQLREAFGGHTSLGHIHWQEQQGREAEARAAAER
AAEAAAAAAAAAAASGGQRGIGAGAAAGGGRSKGGGLTGTDRLVRRGGAR
GPWGLITGAVDVDLFEAAKASDMEACEAALAAGADLNFNRHNGGSLLAWK
GWRLKIGGIEWGLQEWDAPIGVVPVTGDTILMIALKCDMQKLAAWVVARP
EYKPEVKNADSKTAEDVARDYGRSHFLTGGEAGTPAGGAAQESTPGALVK
QAPATSAAAANAAAPPRLPAREHMRVFSEGSTTAQMDHALLRAKDAQIAV
PALLRAKDAQTVVLALLRAKDVQIAELQAALARATLDRQKSESEALDLRT
RIVILESSLKSTKPAWMKKSTSLAA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036770	Ankyrin_rpt-contain_sf