mRNA_16793 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|176989 vs. uniprot
Match: A0A835ZI64_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI64_9STRA) HSP 1 Score: 939 bits (2427), Expect = 0.000e+0 Identity = 445/445 (100.00%), Postives = 445/445 (100.00%), Query Frame = 1
Query: 1 MIVAEHCFPCSRRRIADSPDHNVGEKRGVDLTGITAVPRDEHDVHVVFSTECSSYQDWQSLLLFFSATRAGHKGPITRLAGGCSPEKQTEILKLHQHMPPHHRVHFTPDYSVISSTGHRYPYYNKPFGMQHFLATANPPITNTIVAVLDPDQVFMKPLTPFLDPDTTILADRNTMPPLRFNGMPVITEGYPASQRYGLGSEWRRWDGLGRIVQDEKSPALTVDPQLADDHYPIGPPYVAHVRDWLKMADKWVEFMPRSLIEYPHLLSEMFALCIASAHLRLPHTVVRTFMVSNADDGNEGWPLIDKLSEDEVCNAHNAPDTSALPVVIHYCQHFRVGIYSWGKWEPKLQELFKCDSPYLLEPPDHLASLRIKIEPDHLDGAPLSPLLAKRHAFVICALTKILNEALRDFRKAMCPSDQQNPTWQLTDVPEEQLKNRDKWEQLGAT 1335
MIVAEHCFPCSRRRIADSPDHNVGEKRGVDLTGITAVPRDEHDVHVVFSTECSSYQDWQSLLLFFSATRAGHKGPITRLAGGCSPEKQTEILKLHQHMPPHHRVHFTPDYSVISSTGHRYPYYNKPFGMQHFLATANPPITNTIVAVLDPDQVFMKPLTPFLDPDTTILADRNTMPPLRFNGMPVITEGYPASQRYGLGSEWRRWDGLGRIVQDEKSPALTVDPQLADDHYPIGPPYVAHVRDWLKMADKWVEFMPRSLIEYPHLLSEMFALCIASAHLRLPHTVVRTFMVSNADDGNEGWPLIDKLSEDEVCNAHNAPDTSALPVVIHYCQHFRVGIYSWGKWEPKLQELFKCDSPYLLEPPDHLASLRIKIEPDHLDGAPLSPLLAKRHAFVICALTKILNEALRDFRKAMCPSDQQNPTWQLTDVPEEQLKNRDKWEQLGAT
Sbjct: 1 MIVAEHCFPCSRRRIADSPDHNVGEKRGVDLTGITAVPRDEHDVHVVFSTECSSYQDWQSLLLFFSATRAGHKGPITRLAGGCSPEKQTEILKLHQHMPPHHRVHFTPDYSVISSTGHRYPYYNKPFGMQHFLATANPPITNTIVAVLDPDQVFMKPLTPFLDPDTTILADRNTMPPLRFNGMPVITEGYPASQRYGLGSEWRRWDGLGRIVQDEKSPALTVDPQLADDHYPIGPPYVAHVRDWLKMADKWVEFMPRSLIEYPHLLSEMFALCIASAHLRLPHTVVRTFMVSNADDGNEGWPLIDKLSEDEVCNAHNAPDTSALPVVIHYCQHFRVGIYSWGKWEPKLQELFKCDSPYLLEPPDHLASLRIKIEPDHLDGAPLSPLLAKRHAFVICALTKILNEALRDFRKAMCPSDQQNPTWQLTDVPEEQLKNRDKWEQLGAT 445
BLAST of jgi.p|Trimin1|176989 vs. uniprot
Match: A0A836CDP3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDP3_9STRA) HSP 1 Score: 400 bits (1028), Expect = 1.640e-133 Identity = 205/431 (47.56%), Postives = 279/431 (64.73%), Query Frame = 1
Query: 97 GITAVPRDEHDVHVVFSTECSSYQDWQSLLLFFSATRAGHKGPITRLAGGCSPEKQTEILKLHQHMPPHHRVHFTPDYSVISSTGHRYPYYNKPFGMQHFLATANPPITNTIVAVLDPDQVFMKPLTPFLDPDTTILADRNT---MPPLRFNGMPVITEGYPASQRYGLGSEWRRWDGLGRIVQDEKSPALTVDPQLADDHYPIGPPYVAHVRDWLKMADKWVEFMPRSLIEYPHLLSEMFALCIASAHLRLPHTVVRTFMVSNADDGNEG--WPLIDKLSEDEVCNAHNAP--------DTSALPVVIHYCQHFRVGIYSWGKWEPKLQELFKCDSPYLLEPPDHLASLRIKIEP-DHLDGAPLSPLLAKRHAFVICALTKILNEALRDFRKAMCPSDQ----QNPTWQLTDVPEEQLKNRDKWEQLGAT 1335
GI +VPR D+H+VFST+CS YQ+WQSLL F+SA RAG KGP+TRLA GCS + E+ +H MP HRVHFTPD+S+ + TG RYPYYNKP ++H+LA A PP+ +VA+LDPD ++PL P++D D R PP+R P ITEG+PA Q Y LG W +W L IV SPAL+V A HYP+GPPY+AHVRD +ADKWVEF+ R+ +P +LSEM+A CIA+AHLRLPH V+R++MVS+ ++ +E W L++ LS+++VC A P LPVV HYC FR G+Y +GK L +F CD+ YL EPP H +LR+K+ P D ++ ++ A R+AF++CALT++LNEAL DFR+A C +++ + LTD+ L + ++W GA+
Sbjct: 6 GIPSVPRHYDDIHIVFSTDCSDYQNWQSLLFFYSAARAGQKGPVTRLASGCSEAQMAELRDVHALMPQRHRVHFTPDFSLDARTGLRYPYYNKPRALRHWLAHAAPPVAEAVVALLDPDMAMLRPLRPYVDDDPETFPRRRGGPGQPPVR-GVEPWITEGHPAGQLYALGGAWAKWPDLATIVGSTTSPALSVPLDQAAKHYPVGPPYLAHVRDMAALADKWVEFVARTYEGHPGILSEMYAFCIAAAHLRLPHHVIRSYMVSDPNNRDEDAPWALVEALSDEDVCRALGPPLDALPASAPIPTLPVVAHYCHVFRAGLYMFGKRRRGLHGVFACDAQYLAEPPPHAGALRVKVHPPDRVEQ--VTRRTAVRNAFMVCALTRLLNEALLDFRQARCGAEEFAAGLSRVRPLTDLSPAVLADAERWAAEGAS 433
BLAST of jgi.p|Trimin1|176989 vs. uniprot
Match: A0A7S3HPB4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPB4_9STRA) HSP 1 Score: 299 bits (766), Expect = 1.650e-93 Identity = 160/387 (41.34%), Postives = 233/387 (60.21%), Query Frame = 1
Query: 112 PRDEHDVHVVFSTECSSYQDWQSLLLFFSATRAGHKGPITRLAGGCSPEKQTEILKLHQHMPPHHRVHFTPDYSVISSTGHRYPYYNKPFGMQHFLATANPPIT-NTIVAVLDPDQVFMKPLTPFLDPDTTILADRNTMPPLRFNGMPVITEGYPASQRYGLGSEWRRWD----GLGRIVQDEKSPALTVDPQLADDHYPIGPPYVAHVRDWLKMADKWVEFMPRSLIEYPHLLSEMFALCIASAHLRLPHTVVRTFMVSNADDGNEGWPLIDKLSEDEVCNAHNAPDTSALPV--VIHYCQHFRVGIYSWGKWEPKLQELFKCDSPYLLEPPDHLASLRIKIEPDHLDGAPLSPLLAKRHAFVICALTKILNEALRDFRKAMCPSD 1251
P ++ +HVVFST+CS YQ+WQ+LLLF SA G KG ITR+A GC +Q E+ L++ + P + HFTPD+ + T +Y +YNKP+GM+H+L A P I NTI+A+LDPD +F++PL P + D ++L DR + VI G+P SQ YGLG+ W + G+I E SP L V+ + + HY +GPPY+AH D++++ + W F+PR +YP+LL+EM+A +A+AH +LPH V +MVSN G E WP +D L + V + + LP+ VIHYCQ++RVG + K +F C+SP ++EPP LA+ K++ + L KR AF +C + LN AL D++K MCP+D
Sbjct: 81 PEEDGQMHVVFSTDCSGYQNWQTLLLFHSAQVVGQKGRITRIASGCDATQQAELTALYKKLYPKYGAHFTPDFKNDAKTNKKYDFYNKPWGMKHWLENAVPAIPPNTIIALLDPDMIFVRPLGPQIRGDISLLTDRGIKDE---EIVDVIGLGHPVSQTYGLGAPWTNDNHKKFNRGKIC-GEGSPCLQVNMRYGELHYSVGPPYIAHRSDFIRIVESWTTFVPRVYEDYPYLLAEMYAYSMAAAHEKLPHVQVDNYMVSNTQAGGESWPHVDSLPQVCVPPDEDGHFYAGLPMTTVIHYCQNYRVGELGFQKRRVP-HNIFSCESPMMVEPPTDLAAATYKVKSGQKVEMK-NALQTKREAFALCVIHSALNAALLDYKKRMCPND 461
BLAST of jgi.p|Trimin1|176989 vs. uniprot
Match: D8LU90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU90_ECTSI) HSP 1 Score: 297 bits (760), Expect = 1.940e-92 Identity = 168/443 (37.92%), Postives = 240/443 (54.18%), Query Frame = 1
Query: 25 PCSRRRIADSPDHNVGEKRGVDLT-GITAVPRDEHDVHVVFSTECSSYQDWQSLLLFFSATRAGHKGPITRLAGGCSPEKQTEILKLHQHMPPHHRVHFTPDYSVISSTGHRYPYYNKPFGMQHFLATANPPITNTIVAVLDPDQVFMKPLTPFL-DPDTTILADRNTMPPLRFNGMPVITEGYPASQRYGLGSEWRRWDGLGRIVQD--EKSPALTVDPQLADDHYPIGPPYVAHVRDWLKMADKWVEFMPRSLIEYPHLLSEMFALCIASAHLRLPHTVVRTFMVSNAD-DGNEGWPLIDKLSEDEVCNAHNAPDT-SALPVVIHYCQHFRVGIYSWGKWEPKLQELFKCDSPYL-LEPPDHLAS--LRIKIEP--------DHLDGAPLSPLLAKRHAFVICALTKILNEALRDFRKAMCP-SDQQNPTWQLTDVPEEQL 1299
P + RR NV + + GI A P D+HVVFST+CS YQ++Q+ +LF SA G KG +TR+A GC+ +++ E+ P VHFTPDYS TG R+ +YNKP GM H+L +A+ P+ +VA++DPD +FM PLTPF+ D D + D + G + EG P Q YGLG W WD L I ++ E SPA V + A YP+GPPY+ H RDW ++ D WV P+ +P +L+EM+ CIA+AH+ L H V MVS+A G EGWPL+D++ VC+ + +LP ++HYCQ +RVG + WGK Q F C S L L PPD+LA +++ P + + + + R + +CA+ + +NEAL ++ C D + TD+ EQL
Sbjct: 47 PSATRRGGGKRRANVDHDAWLGIAPGIAAKPASADDIHVVFSTDCSPYQNYQATMLFHSAEMVGQKGRVTRVASGCTRDERLELEVFMMRQPERFHVHFTPDYSFDPETGERFMFYNKPNGMAHYLKSADYPVHEAVVALVDPDMIFMSPLTPFVGDADKMLWHDGDAG-----EGPDWVEEGSPVGQYYGLGGVWTTWDDLREITENLGEDSPARAVSTEEAISGYPVGPPYMMHPRDWARVLDLWVALSPKVHKGHPGILAEMYGFCIAAAHIGLRHRVAYGLMVSDAGMPGKEGWPLVDQMGT-SVCDPESVDHRRGSLPPIVHYCQMYRVGTFMWGKRHRTHQTFFGCHSDSLELPPPDYLAGPMAEVRVHPRRGRAQLGEQAEPERVPAVTGMRQGYAMCAVLRAMNEALVKYKYRYCERGDVSGGVRRFTDLSREQL 483
BLAST of jgi.p|Trimin1|176989 vs. uniprot
Match: A0A7S2SD89_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD89_9STRA) HSP 1 Score: 270 bits (689), Expect = 7.460e-82 Identity = 150/388 (38.66%), Postives = 220/388 (56.70%), Query Frame = 1
Query: 127 DVHVVFSTECSSYQDWQSLLLFFSATRAGHKGPITRLAGGCSPEKQTEILKLHQHMP-PHHRVHFTPDYSVISSTGHRYPYYNKPFGMQHFLATANPPITNTIVAVLDPDQVFMKPLTPFLDPDTTILADRNTMPPLRFNGMPV-ITEGYPASQRYGLGSEWRRWDGLGRIVQDEKSPALTVDPQLADDHYPIGPPYVAHVRDWLKMADKWVEFMPRSLIEYPHLLSEMFALCIASAHLRLPHTVVRTFMVSNADDGNEGWPLIDKLSEDEVC------NAHNAPDTSALPVVIHYCQHFRVGIYSWGKWEPKLQELFKCDSPYLLEPPDHLASLRIKIEPDHLDGAPL--------SPLLAKRHAFVICALTKILNEALRDFRKAMC 1242
++HV FST+C ++QDWQS +++ SA AGH GPITR+A GC+ + Q L LH P P+ RVHFTP +S + TG Y +YNKP G+ H+L P I+A++DPDQ F++PLTP D + + P++ +P I +G PA+Q YGLG W R++ + SP L + A + +GPPY+ HV DW ++A WV+F+P+ EYPHLL+EM+A +A+AH LPH V MVSN EGWPL+D L VC +++ + S LP IH CQ + VG + + K + CD+ +L EPP+ + S ++ + P + KR+ F++C +TK++NEA+R +RK C
Sbjct: 111 EIHVAFSTDCKAFQDWQSAMVWSSAALAGHIGPITRIASGCASKSQEAEL-LHASKPWPNARVHFTPKFSTDTKTGREYHFYNKPRGILHWLTHGRPEAD--IIALIDPDQFFLRPLTP----DLAGVPNLVVTDPVKKETLPTRIGKGAPAAQFYGLGDRWLRFNR--EYICGAGSPCLEATSRDAWRSFTVGPPYILHVDDWKRLARSWVDFVPKVYEEYPHLLAEMYAYSLAAAHEELPHFRVNHLMVSNVGSYGEGWPLVDSLPS--VCADALRPSSNTSSAASMLPTFIHACQSYHVGRFRFSKRALPTDKFSSCDAEFLHEPPETVLSTELQEIVTQIAQGPRRKKTNEEKKAVEEKRNGFMVCMITKLINEAMRVYRKGAC 487
BLAST of jgi.p|Trimin1|176989 vs. uniprot
Match: W7T637_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T637_9STRA) HSP 1 Score: 262 bits (670), Expect = 2.670e-79 Identity = 148/392 (37.76%), Postives = 225/392 (57.40%), Query Frame = 1
Query: 112 PRDEHDVHVVFSTECSSYQDWQSLLLFFSATRAGHKGPITRLAGGCSPEKQTEILKLHQHMPPHHRVHFTPDYSVISSTGHRYPYYNKPFGMQHFL-ATANPPITNTIVAVLDPDQVFMKPLTPFLDPDTTILADRNTMPPLRFNGM-PVITEGYPASQRYGLGSEWRRWDGLGRIVQDEKSPALTVDPQLADDHYPIGPPYVAHVRDWLKMADKWVEFMPRSLIEYPHLLSEMFALCIASAHLRLPHTVVRTFMVSNADDGNEGWPLIDKLSEDEVCNAHNAPDTSALPVVIHYCQHFRVGIYSWGKWEPKLQ-ELFKCDSPYLLEPPDHLASLRIKIEPDHLDGAPL-SPLLAKRHAFVICALTKILNEALRDFRKAMCPSDQQNPTWQL 1275
P D+ +++VFST+CS YQ+WQSL +FF+A G I R+A GCS ++ E+ KL+ P +VHFTP++ + +G Y +YNKP+G+QH+L + A P + IVA+LDPD +FM+PLT + D + + PP+ + + EG+P +Q YG+GS+W ++ + + SPA V A +Y +G PY+AHV+D K+A+ W F+PR EYPHLL+EM+A IA+AHL + +MVSN EGWP +D+L++ VC+A PV +HYCQ +RV WG + ++ LF C SP + PP+ L K D+ D + S A+R A+++C + + LN A F+ C + N T ++
Sbjct: 85 PEDDR-LYLVFSTDCSGYQNWQSLAVFFTADAVRQPGTIVRIASGCSEAEKKEVQKLYDTFPVRFQVHFTPNFKKDAKSGKSYDFYNKPYGLQHWLDSKAAPKHKDAIVALLDPDFLFMRPLTYKVKQDRVLYS-----PPVTDGDLIDEVREGHPVAQYYGIGSQWTKFKV--EYIAGKDSPASKVSISDASRYYSVGAPYIAHVKDMRKIAESWANFVPRVYEEYPHLLAEMYAYSIAAAHLXXXXXRLDHYMVSNTQAAGEGWPFVDRLTDKYVCSAEAPDQGQEQPVFLHYCQFYRVE--HWGFHKRRVATNLFTCKSPLFIMPPEDLEDTHWK---DNGDKKTMYSKQEAQRAAYMLCNVIRKLNGAAVKFKNLNCLAGSANYTQEI 463
BLAST of jgi.p|Trimin1|176989 vs. uniprot
Match: A0A7S3Q7Y1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q7Y1_9STRA) HSP 1 Score: 259 bits (661), Expect = 1.160e-77 Identity = 147/396 (37.12%), Postives = 225/396 (56.82%), Query Frame = 1
Query: 112 PRDEHDVHVVFSTECSSYQDWQSLLLFFSATRAGHKGPITRLAGGCSPEKQTEIL----KLHQHMPPHHRVHFTPDYSVISSTGHR-----YPYYNKPFGMQHFLATANPPITNT-IVAVLDPDQVFMKPLT-PFLDPDTTILADRNTMPPLRFNGMPVITEGYPASQRYGLGSEWRRWDGLGRIVQDEKSPALTVDPQLADDHYPIGPPYVAHVRDWLKMADKWVEFMPRSLIEYPHLLSEMFALCIASAHLRLPHTVVRTFMVSNAD-DGNEGWPLIDKLSEDEVCNAHNAPDTSALPVVIHYCQHFRVGIYSWGKWEPKLQELFKCDSPYLLEPPDHLAS-LRIKIEPDHLDGAP--LSPLLAKRHAFVICALTKILNEALRDFRKAMCPSDQ 1254
P + H VFST+CS YQ WQS LLF+SA + G +TR+A GC+ E+Q ++ M + +VHFTP +S + G Y ++NKPFG+ H++ A I + IV +LDPDQV +P+T F + L +N ++T G P +Q +G G+ WR D + + SPA +V Q A DHYP GPPY+A +D +A W +F+PRS +P L++EM+A CIA AHL++PH +V++ MVS+ D + EGW ++ + ++++C+ A S LP V+HYCQ + +G + +GK + L + F CD+P L PP+ +A I+P+ +DG L+ + K+ AF+IC LT NEA + ++ C S +
Sbjct: 80 PTSTPNYHTVFSTDCSGYQHWQSYLLFYSAYKVKQPGTVTRIASGCTKEEQEAERAFQSQISDQMSSNFKVHFTPQFSKVKGEGEEGDGETYKFFNKPFGLLHWIEHAEVKIKDDDIVILLDPDQVLTRPITNDFSNQSENTLVGQNPKT--------IVTHGSPFAQEFGFGASWRNLD-IDAVTGTNDSPAKSVTEQDAIDHYPAGPPYLATTKDMHAIARTWSDFVPRSYKIFPELMAEMYAFCIAVAHLKMPHQIVKSLMVSDVDVEDGEGWNFVEAIEDEKICSPA-AMGYSTLPSVLHYCQRYVLGKHIFGKHKMPL-DTFSCDAPLLAIPPEDIAERYDYWIDPNLVDGKREYLTKIEVKKTAFMICFLTHHANEASKFYKSRNCKSSE 464
BLAST of jgi.p|Trimin1|176989 vs. uniprot
Match: A0A7S2GWL2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GWL2_9STRA) HSP 1 Score: 259 bits (663), Expect = 2.640e-77 Identity = 148/407 (36.36%), Postives = 215/407 (52.83%), Query Frame = 1
Query: 118 DEHDVHVVFSTECSSYQDWQSLLLFFSATRAGHKGPITRLAGGCSPEKQTEILKLHQH----MPPHHRVHFTPDYSVISSTGHR----YPYYNKPFGMQHFLA---------TANPPITNTIVAVLDPDQVFMKPLTPFLDPDTTILADRNTMPPLRFNGMPVITEGYPASQRYGLGSEWRRWDGLGRIVQDEKSPALTVDPQLADDHYPIGPPYVAHVRDWLKMADKWVEFMPRSLIEYPHLLSEMFALCIASAHLRLPHTVVRTFMVSNADDGNEGWPLIDKLSEDEVCNAHNAPDTSALPV--VIHYCQHFRVGIYSWGKWEPKLQELFKCDSPYLLEPPD-HLASLRIKIEPDHLDGAPLSPLLAKRHAFVICALTKILNEALRDFRKAMCPSDQQNPTWQLT 1278
D +HV+FST+CSSYQ WQS +LF+SA R G +TR+A GCS E+ K H + R+HFTP +S ++ + Y Y+NKPFG++HFL N +T++ ++DPD ++P+ + + + P N + G P +Q YGLG +W + L I D SPA V HYP GPPY+A RD ++ KW EF PR YPHLL+EM+A C+A+AHLRLPH +V + MVS+ G EGWP+++ + EDEVC+ D P+ +HYCQ + VG + W K + ++F C+SP PP + +L+ K E ++ K +AFV+CAL + EA+ F++ C + N LT
Sbjct: 149 DSTKLHVIFSTDCSSYQHWQSYVLFYSALRIKQPGYVTRIASGCSDEEAKVAKKWHDEHVTILSSRFRIHFTPHFSSVTDKEGKQKGDYKYFNKPFGLRHFLEHDPLMGLDDAGNMKEEDTVIILIDPDMWLLRPIIHDYSNERDVFIGQRKRP----NRKKKVEHGVPFAQTYGLGMKWLEFP-LDYITSDPNSPAKDVVRAEGALHYPGGPPYIATARDMYAISIKWAEFAPRLHEGYPHLLAEMYAYCVAAAHLRLPHQLVDSIMVSSQQTGGEGWPMVNTIPEDEVCDVAINADHEKYPIPSTVHYCQRYSVGTWLWAKRKVP-HDIFTCESPIFASPPSTDVINLKHKFENRGDVKKEMTDKEWKHNAFVVCALLNGVAEAMEFFKEMHCDKESVNTERTLT 549
BLAST of jgi.p|Trimin1|176989 vs. uniprot
Match: A0A7S3MDZ4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MDZ4_9STRA) HSP 1 Score: 254 bits (650), Expect = 3.150e-77 Identity = 144/379 (37.99%), Postives = 210/379 (55.41%), Query Frame = 1
Query: 142 FSTECSSYQDWQSLLLFFSATRAGHKGPITRLAGGCSPEKQTEILKLHQHMPPHHRVHFTPDYSVISSTGHRYPYYNKPFGMQHFLATANPPI-TNTIVAVLDPDQVFMKPLTPFLDPDTTILADRNTMPPLRFNGMPV-ITEGYPASQRYGLGSEWRR---WDGLGRI-VQDEKSPALTVDPQLADDHYPIGPPYVAHVRDWLKMADKWVEFMPRSLIEYPHLLSEMFALCIASAHLRLPHTVVRTFMVSNADDGNEGWPLIDKLSEDEVC----NAHNAPDTSALPVVIHYCQHFRVGIYSWGKWEPKLQELFKCDSPYLLEPPDHLASLRIKIEPDHLDGA--PLSPLLAKRHAFVICALTKILNEALRDFRKAMC 1242
FST+CS +QDWQ+LL+F SA KG ITR+A GC K+ E+ L++ + P + VHFTPD+ + +Y +YNKP+G+QH+L A PP+ + TIV ++DPD + ++P+ P + + + P F +P + G P +Q YGLG+ W + R V SP L + H+ +GPPY+ D LK+ + W +PR +YP LL+EM+A +A+AH LPH + MVSN +EGWP ID+L ED VC + P T +P V+HYCQ +R G + K K +ELF CD P +LE P L + K + DG PL A+R+AF++CAL +N + ++ MC
Sbjct: 1 FSTDCSFFQDWQTLLIFHSAVSVKQKGLITRIASGCDDAKKVELTTLYKKLYPQYGVHFTPDFKTDGKSKKKYDFYNKPYGVQHWLVNAEPPVPSGTIVNIIDPDMIILRPMVPQIKGNPANIFMNRFKPETDF--IPEKVAHGMPVAQLYGLGAPWAQKAPHKHFNRTHVCGAGSPCLDTTTSFGEQHFSVGPPYMVEKDDLLKLVNSWTAMVPRVYEKYPSLLAEMYAYSMAAAHTDLPHFTLHNLMVSNVHAEDEGWPWIDQL-EDNVCAKPVDGVLYP-TKVMPSVLHYCQFYRAGEMGFQKRRIK-KELFSCDQPMMLELPADLGKVNYK----NRDGEHMPLGKREARRNAFMLCALHNSINAMVTHYKSVMC 370
BLAST of jgi.p|Trimin1|176989 vs. uniprot
Match: A0A1Z5J689_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J689_FISSO) HSP 1 Score: 257 bits (656), Expect = 4.210e-77 Identity = 154/405 (38.02%), Postives = 225/405 (55.56%), Query Frame = 1
Query: 112 PRDEHDVH--VVFSTECSSYQDWQSLLLFFSATRAGHKGPITRLAGGCSPEKQTEI-----LKLHQHMPPHHRVHFTPDYSVISSTGHRYPYYNKPFGMQHFLATA-----NPPITNTIVAVLDPDQVFMKPLTPFLDPDTTILADRNTMPPLRFNGMP--VITEGYPASQRYGLGSEWRRWDGLGRIVQDEKSPALTVDPQLADDHYPIGPPYVAHVRDWLKMADKWVEFMPRSLIEYPHLLSEMFALCIASAHLRLPHTVVRTFMVSNAD--DGNEGWPLIDKLSEDEVCNAHNAPDTSALPVVIHYCQHFRVGIYSWGKWE-PKLQELFKCDSPYLLEPPDHLASLRIKIEPDHLD-----GAPLSPLLAKRHAFVICALTKILNEALRDFRKAMCPSDQQN 1260
PRDE+ VH +VFST CS YQDWQS + F+ A G +TR+ GC+ E+++ + L++ P ++HFTPDYS + ++ Y+NKPFGM+H+L TA NP ++IV ++DPDQ+ ++P F D D T +PP N P I GYP Q YG +W++ + + +E SP T+ + A Y +GPPY+A RD K+ KW EF P +YP+LL+EMFA C+A+AHL+L H +FM+S+ G EGW ID++ ++E+C+ + + LP VIH+CQ + +G Y +GK PK + C++P L EP +I+ DH+D G S KR+ FV+C L LN A ++K C DQ N
Sbjct: 84 PRDENGVHYHIVFSTGCSIYQDWQSFVFFYHAMAVNQPGTVTRIVSGCNEEEESTLQALFDLQIKPMAPERFKIHFTPDYSNVKGGKTKFVYFNKPFGMRHWLQTALGFPYNPIDEDSIVVLMDPDQLILRP---FRDNDFTN-TQWKFVPP---NQKPRTKIEHGYPMGQLYGFALQWKQKIDMTLVSPNEPSPVTTMSNEEARAGYIVGPPYIATARDMYKIVSKWCEFAPAVHDQYPYLLAEMFAYCLAAAHLQLAHQTATSFMISDVGVGAGGEGWGYIDQIPDEEICSPKSVEE---LPNVIHFCQRYGLGKYFFGKRRLPK--DFLSCEAPLLKEP------TLAEIQTDHVDWPMGDGKDWSKEHGKRNRFVLCNLIPALNAAAEYYKKHNC-GDQAN 469 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|176989 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_16793 ID=mRNA_16793|Name=jgi.p|Trimin1|176989|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1338bp|location=Sequence derived from alignment at Contig_144:130746..137851- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGATAGTGGCTGAGCACTGCTTCCCATGCTCTCGCCGCCGCATCGCAGAback to top protein sequence of jgi.p|Trimin1|176989 >Trimin1|176989|e_gw1.144.23.1 ID=Trimin1|176989|e_gw1.144.23.1|Name=jgi.p|Trimin1|176989|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=446bp MIVAEHCFPCSRRRIADSPDHNVGEKRGVDLTGITAVPRDEHDVHVVFSTback to top mRNA from alignment at Contig_144:130746..137851- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_16793 ID=mRNA_16793|Name=jgi.p|Trimin1|176989|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7106bp|location=Sequence derived from alignment at Contig_144:130746..137851- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_144:130746..137851- >mRNA_16793 ID=mRNA_16793|Name=jgi.p|Trimin1|176989|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1338bp|location=Sequence derived from alignment at Contig_144:130746..137851- (Tribonema minus UTEX_B_3156 )back to top |