Trimin1|353003|estExt_Genemark1.C_Ctg_1400024 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353003
Unique NameTrimin1|353003|estExt_Genemark1.C_Ctg_1400024
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1489
Homology
BLAST of jgi.p|Trimin1|353003 vs. uniprot
Match: A0A836CKH9_9STRA (Bromo domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKH9_9STRA)

HSP 1 Score: 2143 bits (5553), Expect = 0.000e+0
Identity = 1488/1488 (100.00%), Postives = 1488/1488 (100.00%), Query Frame = 0
Query:    1 MARQLANGGRGLVVHDGADAQPQPAGAIVQRPQQPLHTHLNLAIDLYSIANHEETKAQLRAEFTTAQAAVVAHEASGSKASIADVYRAYMDRLDPLLADPRFDSTKRDLNAAYHKCRRQLGLPLDLANMPDSDPVLCAEAAALHTQLRRVKEETEQALEATLEAQLGGVRQRLEQELAALKNRFGKLAEDERALARTVGMSCRQVDQLSQQVANQRGQAHLPDSLLQRLQPHINTAVEQAVAAATHRLQKQADADRAALAAERRARERVEHQLAELQKALAKVPDGDAMKQHQLGVAHQMATQVATTVHTQTLAVLNERTGALQTALGTQVLHVRQQLAQQINEAIAAGISTLTTAVRQSQLAVPQPPPQAALQPLXXXXXXXXXXXXXXLPLALPSQQXXXXXXXXXXXXXXARAAAPTVLMEVDGEPVVPAPPAVVASAERAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAPKPPAAXXXXSPPAGKAAXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXEVXXXXXXXXXXXAETARPTXXXXXXXXXXXXXXXXXXXXXGAPPAVAAXXXXXXXXXXXAAAAKGLAGGMTGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGGGKPGQGGAGDKAAERMESAILSLSNSASLISFPSHVSLATALAAVLGAERHTQDRAPAKVTAAAAAEPDQPDWVNKAVQVLNKLAAHALLGVXXXXXXXXXFNVAALPDPPASACARLTVTWLRAKLRARAIATPQDFATAADDVLRGECERARGGVAALAAAWLRLHFQWLCLEALPLDGGGEDAPAAADSNTRFFDATAKQFAQKLWAVMPSGSAPALPVVRLSSALRAQQRRMREALVRQVEVEAGAGGGLGDEFRQAQKGYARMLGVLYGRDSARHGRGVQKKMSQVLRQLGSNSARVTKFKTHFNILVELRASVGGDDASEARLALDSLIAEYYTLKVLEVEAARIVSRLLHPEPVXXXXXXXXXXXXXXXXXXLSTANGYHARPRAVAASAAPPVXXXXXXXXXXXXXXSDDMVIEEVTPRKPHGAGASRSRPSSQVKKSPAKARAKRDTSSSDGSAGDESDALDGDDFIDKVSSYAKAVTQNAGXXXXXXXXXXXLVKEEKQPPAAPPLAEDDEPDDQLNMDECALCGNIGDLVQCDGCPRSYHFACLRAKRGVQLAGIDGPGQLPDPWHCFMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCTDEASPQLAGTTLRAKLHCLQRLLDGHDLIQRYFGRPVDLAEFPDYREVITDPQDLITAKALLTLTVLDSRIENDAGSMRQAVCAYLQVLAKIVANCQEYNRQKTVIYGVAEVMRKFVHAAYVTHIAPLLSEPDWASLEAHGYPAYPPGAAPAASDISPKRSAPSGDSEAQGISATAQVTXXXXXXXXXXXXXXXXXXXXXXXVFWVVGPDPDQPGIVCG 1488
            MARQLANGGRGLVVHDGADAQPQPAGAIVQRPQQPLHTHLNLAIDLYSIANHEETKAQLRAEFTTAQAAVVAHEASGSKASIADVYRAYMDRLDPLLADPRFDSTKRDLNAAYHKCRRQLGLPLDLANMPDSDPVLCAEAAALHTQLRRVKEETEQALEATLEAQLGGVRQRLEQELAALKNRFGKLAEDERALARTVGMSCRQVDQLSQQVANQRGQAHLPDSLLQRLQPHINTAVEQAVAAATHRLQKQADADRAALAAERRARERVEHQLAELQKALAKVPDGDAMKQHQLGVAHQMATQVATTVHTQTLAVLNERTGALQTALGTQVLHVRQQLAQQINEAIAAGISTLTTAVRQSQLAVPQPPPQAALQPLXXXXXXXXXXXXXXLPLALPSQQXXXXXXXXXXXXXXARAAAPTVLMEVDGEPVVPAPPAVVASAERAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAPKPPAAXXXXSPPAGKAAXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXEVXXXXXXXXXXXAETARPTXXXXXXXXXXXXXXXXXXXXXGAPPAVAAXXXXXXXXXXXAAAAKGLAGGMTGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGGGKPGQGGAGDKAAERMESAILSLSNSASLISFPSHVSLATALAAVLGAERHTQDRAPAKVTAAAAAEPDQPDWVNKAVQVLNKLAAHALLGVXXXXXXXXXFNVAALPDPPASACARLTVTWLRAKLRARAIATPQDFATAADDVLRGECERARGGVAALAAAWLRLHFQWLCLEALPLDGGGEDAPAAADSNTRFFDATAKQFAQKLWAVMPSGSAPALPVVRLSSALRAQQRRMREALVRQVEVEAGAGGGLGDEFRQAQKGYARMLGVLYGRDSARHGRGVQKKMSQVLRQLGSNSARVTKFKTHFNILVELRASVGGDDASEARLALDSLIAEYYTLKVLEVEAARIVSRLLHPEPVXXXXXXXXXXXXXXXXXXLSTANGYHARPRAVAASAAPPVXXXXXXXXXXXXXXSDDMVIEEVTPRKPHGAGASRSRPSSQVKKSPAKARAKRDTSSSDGSAGDESDALDGDDFIDKVSSYAKAVTQNAGXXXXXXXXXXXLVKEEKQPPAAPPLAEDDEPDDQLNMDECALCGNIGDLVQCDGCPRSYHFACLRAKRGVQLAGIDGPGQLPDPWHCFMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCTDEASPQLAGTTLRAKLHCLQRLLDGHDLIQRYFGRPVDLAEFPDYREVITDPQDLITAKALLTLTVLDSRIENDAGSMRQAVCAYLQVLAKIVANCQEYNRQKTVIYGVAEVMRKFVHAAYVTHIAPLLSEPDWASLEAHGYPAYPPGAAPAASDISPKRSAPSGDSEAQGISATAQVTXXXXXXXXXXXXXXXXXXXXXXXVFWVVGPDPDQPGIVCG
Sbjct:    1 MARQLANGGRGLVVHDGADAQPQPAGAIVQRPQQPLHTHLNLAIDLYSIANHEETKAQLRAEFTTAQAAVVAHEASGSKASIADVYRAYMDRLDPLLADPRFDSTKRDLNAAYHKCRRQLGLPLDLANMPDSDPVLCAEAAALHTQLRRVKEETEQALEATLEAQLGGVRQRLEQELAALKNRFGKLAEDERALARTVGMSCRQVDQLSQQVANQRGQAHLPDSLLQRLQPHINTAVEQAVAAATHRLQKQADADRAALAAERRARERVEHQLAELQKALAKVPDGDAMKQHQLGVAHQMATQVATTVHTQTLAVLNERTGALQTALGTQVLHVRQQLAQQINEAIAAGISTLTTAVRQSQLAVPQPPPQAALQPLXXXXXXXXXXXXXXLPLALPSQQXXXXXXXXXXXXXXARAAAPTVLMEVDGEPVVPAPPAVVASAERAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAPKPPAAXXXXSPPAGKAAXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXEVXXXXXXXXXXXAETARPTXXXXXXXXXXXXXXXXXXXXXGAPPAVAAXXXXXXXXXXXAAAAKGLAGGMTGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGGGKPGQGGAGDKAAERMESAILSLSNSASLISFPSHVSLATALAAVLGAERHTQDRAPAKVTAAAAAEPDQPDWVNKAVQVLNKLAAHALLGVXXXXXXXXXFNVAALPDPPASACARLTVTWLRAKLRARAIATPQDFATAADDVLRGECERARGGVAALAAAWLRLHFQWLCLEALPLDGGGEDAPAAADSNTRFFDATAKQFAQKLWAVMPSGSAPALPVVRLSSALRAQQRRMREALVRQVEVEAGAGGGLGDEFRQAQKGYARMLGVLYGRDSARHGRGVQKKMSQVLRQLGSNSARVTKFKTHFNILVELRASVGGDDASEARLALDSLIAEYYTLKVLEVEAARIVSRLLHPEPVXXXXXXXXXXXXXXXXXXLSTANGYHARPRAVAASAAPPVXXXXXXXXXXXXXXSDDMVIEEVTPRKPHGAGASRSRPSSQVKKSPAKARAKRDTSSSDGSAGDESDALDGDDFIDKVSSYAKAVTQNAGXXXXXXXXXXXLVKEEKQPPAAPPLAEDDEPDDQLNMDECALCGNIGDLVQCDGCPRSYHFACLRAKRGVQLAGIDGPGQLPDPWHCFMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCTDEASPQLAGTTLRAKLHCLQRLLDGHDLIQRYFGRPVDLAEFPDYREVITDPQDLITAKALLTLTVLDSRIENDAGSMRQAVCAYLQVLAKIVANCQEYNRQKTVIYGVAEVMRKFVHAAYVTHIAPLLSEPDWASLEAHGYPAYPPGAAPAASDISPKRSAPSGDSEAQGISATAQVTXXXXXXXXXXXXXXXXXXXXXXXVFWVVGPDPDQPGIVCG 1488          
BLAST of jgi.p|Trimin1|353003 vs. uniprot
Match: A0A835Z3E0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3E0_9STRA)

HSP 1 Score: 121 bits (304), Expect = 6.430e-24
Identity = 81/217 (37.33%), Postives = 103/217 (47.47%), Query Frame = 0
Query: 1173 ECALCGNIGDLVQCDGCPRSYHFACLRAKRGVQLAG-IDGPGQLP--DPWHCFMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCTDEASPQLAGTTLRAKLHCLQRLLDGHDLIQRYFGRPVDLAEFPDYREVITDPQDLITAKALLTLTV-----LDSRIE-NDAGS---MRQAVCAYLQVLAKIVANCQEYNRQKTVIYG 1377
            +CA+C + GDLVQCDGCPRSYHFACLR     +L   +    QL   + W CF                                            KC  E +P L G  L AKL  L +LL GHDLI+  F  PVDL E+P Y + +  PQDL +A   L   +     LD  ++  D  +   ++ A   YL +LA IV NCQ +NR+KTVIYG
Sbjct:  877 QCAVCDDTGDLVQCDGCPRSYHFACLRRDAAGRLPPRVASKKQLVGLEFWCCF--------------------------------------------KCCAERTPSLEGRNLLAKLMSLHKLLMGHDLIRESFLHPVDLREYPAYLDTVESPQDLTSASQCLRERLGEWGTLDKGVKVGDPPADAVVKAAALKYLTLLATIVHNCQVFNRKKTVIYG 1049          
BLAST of jgi.p|Trimin1|353003 vs. uniprot
Match: A0A7S0Q6V2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q6V2_9EUKA)

HSP 1 Score: 58.9 bits (141), Expect = 2.270e-6
Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 0
Query: 1160 AEDDEPDDQLNMDECALCGNIGDLVQCDGCPRSYHFACL 1198
            AE  EPDD  NMDEC  C + GDL+ CDGCP+S+HF CL
Sbjct:   77 AEAAEPDDGENMDECYHCKDGGDLILCDGCPKSFHFECL 115          
BLAST of jgi.p|Trimin1|353003 vs. uniprot
Match: UPI0005107ED5 (autoimmune regulator-like n=1 Tax=Pelecanus crispus TaxID=36300 RepID=UPI0005107ED5)

HSP 1 Score: 56.6 bits (135), Expect = 7.530e-6
Identity = 27/56 (48.21%), Postives = 34/56 (60.71%), Query Frame = 0
Query: 1156 APPLAEDDEPDDQLNMDECALCGNIGDLVQCDGCPRSYHFACL-----RAKRGVQL 1206
            AP +   D    Q N DECA CG+ G+L+ CDGCPR++H ACL     R  RG+ L
Sbjct:    5 APAMHSQDLAPHQENEDECAACGDGGELICCDGCPRAFHLACLVPPLPRVPRGLLL 60          
BLAST of jgi.p|Trimin1|353003 vs. uniprot
Match: A0A7K7Z2W0_THRLU (AIRE regulator (Fragment) n=1 Tax=Thryothorus ludovicianus TaxID=74200 RepID=A0A7K7Z2W0_THRLU)

HSP 1 Score: 61.2 bits (147), Expect = 9.780e-6
Identity = 25/45 (55.56%), Postives = 31/45 (68.89%), Query Frame = 0
Query: 1154 PAAPPLAEDDEPDDQLNMDECALCGNIGDLVQCDGCPRSYHFACL 1198
            P APP+     P  Q N DECA CG+ G+L+ CDGCPR++H ACL
Sbjct:  218 PCAPPVTHCSHPRGQENEDECAACGDGGELICCDGCPRAFHLACL 262          
BLAST of jgi.p|Trimin1|353003 vs. uniprot
Match: A0A663E3L4_AQUCH (PHD domain-containing protein n=1 Tax=Aquila chrysaetos chrysaetos TaxID=223781 RepID=A0A663E3L4_AQUCH)

HSP 1 Score: 55.1 bits (131), Expect = 1.360e-5
Identity = 20/31 (64.52%), Postives = 26/31 (83.87%), Query Frame = 0
Query: 1168 QLNMDECALCGNIGDLVQCDGCPRSYHFACL 1198
            Q N DECA+CG+ G+L+ CDGCPR++H ACL
Sbjct:   47 QENEDECAVCGDGGELICCDGCPRAFHLACL 77          
BLAST of jgi.p|Trimin1|353003 vs. uniprot
Match: A0A091EI64_CORBR (Autoimmune regulator (Fragment) n=1 Tax=Corvus brachyrhynchos TaxID=85066 RepID=A0A091EI64_CORBR)

HSP 1 Score: 59.3 bits (142), Expect = 2.320e-5
Identity = 25/45 (55.56%), Postives = 31/45 (68.89%), Query Frame = 0
Query: 1154 PAAPPLAEDDEPDDQLNMDECALCGNIGDLVQCDGCPRSYHFACL 1198
            P APP+     P  Q N DECA CG+ G+L+ CDGCPR++H ACL
Sbjct:  252 PCAPPVTPCPLPRGQENEDECAACGDGGELICCDGCPRAFHLACL 296          
BLAST of jgi.p|Trimin1|353003 vs. uniprot
Match: A0A8K0NE88_9HYPO (Uncharacterized protein n=1 Tax=Claviceps africana TaxID=83212 RepID=A0A8K0NE88_9HYPO)

HSP 1 Score: 60.8 bits (146), Expect = 2.450e-5
Identity = 30/67 (44.78%), Postives = 36/67 (53.73%), Query Frame = 0
Query: 1155 AAPPLAEDDEPDDQLNMDECALCGNIGDLVQCDGCPRSYHFACLRAKRGVQLAGIDGPGQLPDPWHC 1221
            A  P AE+DE         C+ CGN GD+V CDGCPRS+HF C+   R  QL         PD W+C
Sbjct:  775 AKDPTAENDE--------NCSACGNTGDVVCCDGCPRSFHFECVDMVRSDQL---------PDEWYC 824          
BLAST of jgi.p|Trimin1|353003 vs. uniprot
Match: UPI0015C3E337 (PHD-finger n=1 Tax=Geosmithia morbida TaxID=1094350 RepID=UPI0015C3E337)

HSP 1 Score: 60.8 bits (146), Expect = 2.450e-5
Identity = 27/59 (45.76%), Postives = 35/59 (59.32%), Query Frame = 0
Query: 1165 PDDQL--NMDECALCGNIGDLVQCDGCPRSYHFACLRAKRGVQLAGIDGPGQLPDPWHC 1221
            P DQ+  N + C+ CGN GD+V CDGCPRS+HF C+          +D    LPD W+C
Sbjct:  773 PKDQMTDNDEYCSACGNAGDVVCCDGCPRSFHFECV---------DMDPSKDLPDEWYC 822          
BLAST of jgi.p|Trimin1|353003 vs. uniprot
Match: A0A7K9GCH9_LOXLE (AIRE regulator (Fragment) n=1 Tax=Loxia leucoptera TaxID=96539 RepID=A0A7K9GCH9_LOXLE)

HSP 1 Score: 59.3 bits (142), Expect = 3.820e-5
Identity = 25/45 (55.56%), Postives = 31/45 (68.89%), Query Frame = 0
Query: 1154 PAAPPLAEDDEPDDQLNMDECALCGNIGDLVQCDGCPRSYHFACL 1198
            P APP+     P  Q N DECA CG+ G+L+ CDGCPR++H ACL
Sbjct:  224 PCAPPVTPCPLPRGQENEDECAACGDGGELICCDGCPRAFHLACL 268          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353003 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CKH9_9STRA0.000e+0100.00Bromo domain-containing protein n=1 Tax=Tribonema ... [more]
A0A835Z3E0_9STRA6.430e-2437.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0Q6V2_9EUKA2.270e-664.10Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
UPI0005107ED57.530e-648.21autoimmune regulator-like n=1 Tax=Pelecanus crispu... [more]
A0A7K7Z2W0_THRLU9.780e-655.56AIRE regulator (Fragment) n=1 Tax=Thryothorus ludo... [more]
A0A663E3L4_AQUCH1.360e-564.52PHD domain-containing protein n=1 Tax=Aquila chrys... [more]
A0A091EI64_CORBR2.320e-555.56Autoimmune regulator (Fragment) n=1 Tax=Corvus bra... [more]
A0A8K0NE88_9HYPO2.450e-544.78Uncharacterized protein n=1 Tax=Claviceps africana... [more]
UPI0015C3E3372.450e-545.76PHD-finger n=1 Tax=Geosmithia morbida TaxID=109435... [more]
A0A7K9GCH9_LOXLE3.820e-555.56AIRE regulator (Fragment) n=1 Tax=Loxia leucoptera... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 259..282
NoneNo IPR availableCOILSCoilCoilcoord: 163..190
NoneNo IPR availableCOILSCoilCoilcoord: 49..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1129..1167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1051..1115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 636..656
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 368..395
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..412
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 517..568
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 530..557
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 463..491
NoneNo IPR availablePANTHERPTHR46508PHD FINGER FAMILY PROTEINcoord: 1162..1373
NoneNo IPR availableCDDcd04369Bromodomaincoord: 1280..1390
e-value: 1.11426E-11
score: 60.849
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 1173..1269
e-value: 1.1E-4
score: 31.6
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 1296..1379
e-value: 3.4E-6
score: 27.1
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 1302..1376
score: 10.7462
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1279..1391
e-value: 2.4E-10
score: 41.9
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 1282..1389
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 1168..1224
e-value: 3.5E-10
score: 41.5
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 1162..1204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_140contigContig_140:228648..247783 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353003mRNA_15643Tribonema minus UTEX_B_3156 mRNAContig_140 228648..247783 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353003|estExt_Genemark1.C_Ctg_1400024 ID=Trimin1|353003|estExt_Genemark1.C_Ctg_1400024|Name=jgi.p|Trimin1|353003|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1489bp
MARQLANGGRGLVVHDGADAQPQPAGAIVQRPQQPLHTHLNLAIDLYSIA
NHEETKAQLRAEFTTAQAAVVAHEASGSKASIADVYRAYMDRLDPLLADP
RFDSTKRDLNAAYHKCRRQLGLPLDLANMPDSDPVLCAEAAALHTQLRRV
KEETEQALEATLEAQLGGVRQRLEQELAALKNRFGKLAEDERALARTVGM
SCRQVDQLSQQVANQRGQAHLPDSLLQRLQPHINTAVEQAVAAATHRLQK
QADADRAALAAERRARERVEHQLAELQKALAKVPDGDAMKQHQLGVAHQM
ATQVATTVHTQTLAVLNERTGALQTALGTQVLHVRQQLAQQINEAIAAGI
STLTTAVRQSQLAVPQPPPQAALQPLPPPAAAAARVLPPPLPLALPSQQQ
RQQRPAAAAPAAPARAAAPTVLMEVDGEPVVPAPPAVVASAERAAGEAAA
AAAAAAPTPAAPAPAAPKPAASMPAATKPATAPKPPAAAAAASPPAGKAA
AASAAATPAAKDAAAAAAVTAPTPAPRTLAEVTAQAQQERTAAAETARPT
PTRARATSPKPSPAAAAAAAAGAPPAVAAQPAAAAQPAAAAAAAKGLAGG
MTGPAAAAKAAAEAASAVAAAAGLGPRAATSTATAAQPAVAGGGKPGQGG
AGDKAAERMESAILSLSNSASLISFPSHVSLATALAAVLGAERHTQDRAP
AKVTAAAAAEPDQPDWVNKAVQVLNKLAAHALLGVLNTLAAHMLFNVAAL
PDPPASACARLTVTWLRAKLRARAIATPQDFATAADDVLRGECERARGGV
AALAAAWLRLHFQWLCLEALPLDGGGEDAPAAADSNTRFFDATAKQFAQK
LWAVMPSGSAPALPVVRLSSALRAQQRRMREALVRQVEVEAGAGGGLGDE
FRQAQKGYARMLGVLYGRDSARHGRGVQKKMSQVLRQLGSNSARVTKFKT
HFNILVELRASVGGDDASEARLALDSLIAEYYTLKVLEVEAARIVSRLLH
PEPVLEVEAARIVSRLLHPEPALSTANGYHARPRAVAASAAPPVATAPPV
AAAAQPAASDDMVIEEVTPRKPHGAGASRSRPSSQVKKSPAKARAKRDTS
SSDGSAGDESDALDGDDFIDKVSSYAKAVTQNAGGNESDALDDEDLVKEE
KQPPAAPPLAEDDEPDDQLNMDECALCGNIGDLVQCDGCPRSYHFACLRA
KRGVQLAGIDGPGQLPDPWHCFMRGVQLAGIDGPGQLPDPWHCFMRGVQL
VGVDGPGQLPDPWHCFKCTDEASPQLAGTTLRAKLHCLQRLLDGHDLIQR
YFGRPVDLAEFPDYREVITDPQDLITAKALLTLTVLDSRIENDAGSMRQA
VCAYLQVLAKIVANCQEYNRQKTVIYGVAEVMRKFVHAAYVTHIAPLLSE
PDWASLEAHGYPAYPPGAAPAASDISPKRSAPSGDSEAQGISATAQVTGA
AAVPQAVAAVAVVAAVLPAAVVFWVVGPDPDQPGIVCG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR001487Bromodomain
IPR036427Bromodomain-like_sf
IPR013083Znf_RING/FYVE/PHD
IPR011011Znf_FYVE_PHD