mRNA_15626 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|176692
Unique Name	mRNA_15626
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|176692 vs. uniprot
Match: A0A836CN85_9STRA (Molybdopterin synthase catalytic subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN85_9STRA)

HSP 1 Score: 410 bits (1054), Expect = 2.410e-144
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1

Query:    1 MPEGAGNSPQDQSSSSATATSPHDLVMVTDQPLELSAMVAAVAGPKCGAISTFLGVTRDTHNGKTVVRLEYEGYAPMAEKELRKICEQARQKWSIEKIAIAHRLGVTAVEEASVIIAVSSVHRRESLEAVQYCIDTLKATVPIWYLEVYEGDSRVWKENAEWSGGGCCRQMVPTNTTVDGTSVAASAAGGAQCIETVAHELHDSGSXXXXXXXXXXXCHDC 663
            MPEGAGNSPQDQSSSSATATSPHDLVMVTDQPLELSAMVAAVAGPKCGAISTFLGVTRDTHNGKTVVRLEYEGYAPMAEKELRKICEQARQKWSIEKIAIAHRLGVTAVEEASVIIAVSSVHRRESLEAVQYCIDTLKATVPIWYLEVYEGDSRVWKENAEWSGGGCCRQMVPTNTTVDGTSVAASAAGGAQCIETVAHELHDSGSXXXXXXXXXXXCHDC
Sbjct:    1 MPEGAGNSPQDQSSSSATATSPHDLVMVTDQPLELSAMVAAVAGPKCGAISTFLGVTRDTHNGKTVVRLEYEGYAPMAEKELRKICEQARQKWSIEKIAIAHRLGVTAVEEASVIIAVSSVHRRESLEAVQYCIDTLKATVPIWYLEVYEGDSRVWKENAEWSGGGCCRQMVPTNTTVDGTSVAASAAGGAQCIETVAHELHDSGSXXXXXXXXXXXCHDC 221

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BLAST of jgi.p|Trimin1|176692 vs. uniprot
Match: A0A6H5JFU8_9PHAE (Molybdopterin synthase catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFU8_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 3.370e-67
Identity = 109/151 (72.19%), Postives = 123/151 (81.46%), Query Frame = 1

Query:   70 DLVMVTDQPLELSAMVAAVAGPKCGAISTFLGVTRDTHNGKTVVRLEYEGYAPMAEKELRKICEQARQKWSIEKIAIAHRLGVTAVEEASVIIAVSSVHRRESLEAVQYCIDTLKATVPIWYLEVYEGDSRVWKENAEWS-GGGCCRQMVP 519
            D V VT   L+L  +V AVA P+ GAISTF G TRD H GK VVRLEYEGY PMAE EL+KIC Q R +W++ KIA+ HRLGVT V EASVIIAVSSVHR++SLEAV++ I+TLKATVPIW LEVYEGDSRVWKENAEW  GGGCCR+MVP
Sbjct:   13 DHVSVTHSCLQLGEIVEAVADPRAGAISTFSGTTRDNHYGKKVVRLEYEGYVPMAELELKKICAQVRDRWNVLKIALVHRLGVTEVGEASVIIAVSSVHRKDSLEAVEFAINTLKATVPIWKLEVYEGDSRVWKENAEWGPGGGCCRKMVP 163

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BLAST of jgi.p|Trimin1|176692 vs. uniprot
Match: A0A8K1CIT3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIT3_PYTOL)

HSP 1 Score: 181 bits (458), Expect = 3.560e-54
Identity = 99/165 (60.00%), Postives = 113/165 (68.48%), Query Frame = 1

Query:   52 TATSPHDLVMVTDQPLELSAMVAAVAGPKCGAISTFLGVTRDTHNGKTVVRLEYEGYAPMAEKELRKICEQARQKW-SIEKIAIAHRLGVTAVEEASVIIAVSSVHRRESLEAVQYCIDTLKATVPIWYLEVYEGDSRVWKENAEWSGGG-----CC---RQMVP 519
            T  S  D V +T   L+    V  V     GA+STF+G TRD  NGK VVRLEYEGY PMAE ELRKIC Q R+KW S+  IA+ HRLGV  V++ASVIIAVSS HRRE++EA +Y IDTLKATVPIW  E YEGD+R+WKENAEW  G      CC   R MVP
Sbjct:   22 TMESAMDYVEITHDTLDHQCAVERVTHASAGAVSTFIGTTRDNFNGKKVVRLEYEGYIPMAEAELRKICTQIREKWPSVVGIALFHRLGVVEVKQASVIIAVSSPHRREAIEACEYAIDTLKATVPIWKSEQYEGDARMWKENAEWQSGAAARTSCCAPKRVMVP 186

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BLAST of jgi.p|Trimin1|176692 vs. uniprot
Match: A0A7S2GDP7_9STRA (Molybdopterin synthase catalytic subunit n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GDP7_9STRA)

HSP 1 Score: 178 bits (452), Expect = 3.160e-53
Identity = 87/144 (60.42%), Postives = 110/144 (76.39%), Query Frame = 1

Query:   70 DLVMVTDQPLELSAMVAAVAGPKCGAISTFLGVTRDTHNGKTVVRLEYEGYAPMAEKELRKICEQARQKWSIEKIAIAHRLGVTAVEEASVIIAVSSVHRRESLEAVQYCIDTLKATVPIWYLEVYEGD--SRVWKENAEWSGG 495
            D+V V +QPL +  ++ +VA P+ GAI TF GVTRD  +GK V RLEYEGY PMAEKE+  IC+Q R++W +E IA+ HRLG+  ++EASV+IAVSS HR+E+LEA QY IDTLK++VPIW  E YE D  S VWKEN EW+GG
Sbjct:   26 DVVRVLEQPLMIQDVIDSVATPRAGAIVTFSGVTRDNFDGKKVTRLEYEGYVPMAEKEMESICKQIRERWEVEHIAMEHRLGICPIQEASVLIAVSSAHRKEALEAAQYAIDTLKSSVPIWKKEFYETDDSSAVWKENKEWAGG 169

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BLAST of jgi.p|Trimin1|176692 vs. uniprot
Match: A0A662XPF0_9STRA (Molybdopterin synthase catalytic subunit n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XPF0_9STRA)

HSP 1 Score: 176 bits (445), Expect = 2.570e-52
Identity = 97/159 (61.01%), Postives = 107/159 (67.30%), Query Frame = 1

Query:   70 DLVMVTDQPLELSAMVAAVAGPKCGAISTFLGVTRDTHNGKTVVRLEYEGYAPMAEKELRKICEQARQKW-SIEKIAIAHRLGVTAVEEASVIIAVSSVHRRESLEAVQYCIDTLKATVPIWYLEVYEGDSRVWKENAEWSGGG-----CC---RQMVP 519
            D V V  +PL+    VA V  P  GAISTF+G TRD   GK VVRLEYEGY PMA  ELRKIC   R+KW  +  +A+ HRLGV  V EASVIIAVSS HRRE+LEA  + IDTLKATVPIW  E YEGDSR+WKEN EW  G      CC   R MVP
Sbjct:   19 DFVEVGYEPLDNQRAVALVTHPSAGAISTFVGTTRDNFQGKKVVRLEYEGYTPMAVSELRKICATVREKWPGVVGVALFHRLGVVEVAEASVIIAVSSPHRREALEACAFAIDTLKATVPIWKSEQYEGDSRMWKENVEWEAGAAVRSSCCGNKRVMVP 177

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BLAST of jgi.p|Trimin1|176692 vs. uniprot
Match: A0A6G0WWQ5_9STRA (Molybdopterin synthase catalytic subunit n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WWQ5_9STRA)

HSP 1 Score: 174 bits (441), Expect = 4.710e-52
Identity = 93/151 (61.59%), Postives = 107/151 (70.86%), Query Frame = 1

Query:   70 DLVMVTDQPLELSAMVAAVAGPKCGAISTFLGVTRDTHNGKTVVRLEYEGYAPMAEKELRKICEQARQKW-SIEKIAIAHRLGVTAVEEASVIIAVSSVHRRESLEAVQYCIDTLKATVPIWYLEVYEGDSRVWKENAEWSGGGCCRQMVP 519
            DL+ VT  PL+++  V  VA    G ISTF+G TRDT  GK V+ LEYE Y PMA KE++ IC   RQ+W S+  IA+ HRLGV  V+EASVIIA+SS HRRESLEAV Y IDTLKA VPIW +E YEGD RVWKENAEW      R MVP
Sbjct:    4 DLIQVTPAPLDVNEAVDYVADASAGGISTFIGTTRDTFQGKKVLHLEYEAYIPMANKEVKAICTAIRQQWPSVVGIAMLHRLGVVPVKEASVIIAISSPHRRESLEAVAYAIDTLKARVPIWKIEKYEGDDRVWKENAEW------RTMVP 148

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BLAST of jgi.p|Trimin1|176692 vs. uniprot
Match: M4BDH5_HYAAE (Molybdopterin synthase catalytic subunit n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BDH5_HYAAE)

HSP 1 Score: 174 bits (440), Expect = 1.250e-51
Identity = 94/163 (57.67%), Postives = 109/163 (66.87%), Query Frame = 1

Query:   70 DLVMVTDQPLELSAMVAAVAGPKCGAISTFLGVTRDTHNGKTVVRLEYEGYAPMAEKELRKICEQARQKW-SIEKIAIAHRLGVTAVEEASVIIAVSSVHRRESLEAVQYCIDTLKATVPIWYLEVYEGDSRVWKENAEWSGGG-----CC---RQMVPTNTT 531
            D+V V  +PL+   +V  V   + GAISTF+G TRD   GK VVRL+YEGYAPMA  ELRKIC   R KW  + ++A+ HRLGV  V EASVI+AVSS HRRE+LEA  + ID LKATVPIW  E YEGD R+WKEN EW GG      CC   R MVP   T
Sbjct:   14 DVVEVGYEPLDSQRIVDLVTDARAGAISTFVGTTRDNFQGKKVVRLKYEGYAPMAVSELRKICSAIRDKWPDVVRVALCHRLGVVNVTEASVIVAVSSPHRREALEACAFAIDRLKATVPIWKCEHYEGDERMWKENLEWKGGAAVRASCCSKKRAMVPAEKT 176

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BLAST of jgi.p|Trimin1|176692 vs. uniprot
Match: UPI00106D25FD (molybdopterin synthase catalytic subunit-like isoform X1 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D25FD)

HSP 1 Score: 172 bits (435), Expect = 2.690e-51
Identity = 82/146 (56.16%), Postives = 105/146 (71.92%), Query Frame = 1

Query:   70 DLVMVTDQPLELSAMVAAVAGPKCGAISTFLGVTRDTHNGKTVVRLEYEGYAPMAEKELRKICEQARQKWSIEKIAIAHRLGVTAVEEASVIIAVSSVHRRESLEAVQYCIDTLKATVPIWYLEVYEGDSRVWKENAEWSGGGCCR 507
            D + +T+  + ++   + V  P  GA S F+G TRDT NGK VVRLEYE Y PMA+KEL KIC+   +KW++ KIAI HR+G+  + EASV+IA+SSVHR+ESLEAVQYCIDTLKATVPIW  EVY+     WKEN++     CC+
Sbjct:    4 DFIKITENAISIAETSSLVGSPSAGATSIFVGTTRDTFNGKRVVRLEYEAYEPMAKKELAKICQDIHKKWNVLKIAIVHRIGLVPISEASVVIAISSVHRKESLEAVQYCIDTLKATVPIWKKEVYDDGQSTWKENSD-----CCK 144

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BLAST of jgi.p|Trimin1|176692 vs. uniprot
Match: D0NGD0_PHYIT (Molybdopterin synthase catalytic subunit n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NGD0_PHYIT)

HSP 1 Score: 171 bits (433), Expect = 1.580e-50
Identity = 94/159 (59.12%), Postives = 106/159 (66.67%), Query Frame = 1

Query:   70 DLVMVTDQPLELSAMVAAVAGPKCGAISTFLGVTRDTHNGKTVVRLEYEGYAPMAEKELRKICEQARQKW-SIEKIAIAHRLGVTAVEEASVIIAVSSVHRRESLEAVQYCIDTLKATVPIWYLEVYEGDSRVWKENAEWSGGG-----CC---RQMVP 519
            D V V  +PL+    VA V  P  GAISTF+G TRD   GK VVRLEYEGY PMA  ELRKIC   R+KW  +  +A+ HRLGV  V EASVI+ VSS HRRE+LEA  + IDTLKATVPIW  E YEGD+R+WKEN EW  G      CC   R MVP
Sbjct:   17 DFVEVGFEPLDNQRAVALVTHPSAGAISTFVGTTRDNFQGKKVVRLEYEGYTPMAVSELRKICVIIREKWPDVVGVALFHRLGVVEVAEASVIVVVSSPHRREALEACAFAIDTLKATVPIWKCEQYEGDTRMWKENVEWKDGAAARSSCCGNKRVMVP 175

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BLAST of jgi.p|Trimin1|176692 vs. uniprot
Match: G4YUD6_PHYSP (Molybdopterin synthase catalytic subunit n=3 Tax=Phytophthora TaxID=4783 RepID=G4YUD6_PHYSP)

HSP 1 Score: 171 bits (433), Expect = 1.680e-50
Identity = 95/161 (59.01%), Postives = 106/161 (65.84%), Query Frame = 1

Query:   70 DLVMVTDQPLELSAMVAAVAGPKCGAISTFLGVTRDTHNGKTVVRLEYEGYAPMAEKELRKICEQARQKW-SIEKIAIAHRLGVTAVEEASVIIAVSSVHRRESLEAVQYCIDTLKATVPIWYLEVYEGDSRVWKENAEWSGGG-----CC---RQMVPTN 525
            D V V   PL+    V  V  P  GAISTF+G TRD   GK VVRLEYEGY PMA  ELRKIC   R+KW  +  +A+ HRLGV  V EASVI+AVSS HRRE+LEA  + IDTLKATVPIW  E YEGD+RVWKEN EW  G      CC   R MVP +
Sbjct:   19 DFVEVGYAPLDNQRAVELVMHPSAGAISTFVGTTRDNFQGKKVVRLEYEGYTPMAVSELRKICVTIREKWPEVVGVALFHRLGVVEVAEASVIVAVSSPHRREALEACAFAIDTLKATVPIWKSEQYEGDTRVWKENVEWKDGAAARSSCCGSKRVMVPVD 179

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|176692 vs. uniprot

BLAST of jgi.p|Trimin1|176692 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CN85_9STRA	2.410e-144	100.00	Molybdopterin synthase catalytic subunit n=1 Tax=T...	[more]
A0A6H5JFU8_9PHAE	3.370e-67	72.19	Molybdopterin synthase catalytic subunit n=1 Tax=E...	[more]
A0A8K1CIT3_PYTOL	3.560e-54	60.00	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A7S2GDP7_9STRA	3.160e-53	60.42	Molybdopterin synthase catalytic subunit n=2 Tax=D...	[more]
A0A662XPF0_9STRA	2.570e-52	61.01	Molybdopterin synthase catalytic subunit n=1 Tax=N...	[more]
A0A6G0WWQ5_9STRA	4.710e-52	61.59	Molybdopterin synthase catalytic subunit n=1 Tax=A...	[more]
M4BDH5_HYAAE	1.250e-51	57.67	Molybdopterin synthase catalytic subunit n=1 Tax=H...	[more]
UPI00106D25FD	2.690e-51	56.16	molybdopterin synthase catalytic subunit-like isof...	[more]
D0NGD0_PHYIT	1.580e-50	59.12	Molybdopterin synthase catalytic subunit n=2 Tax=P...	[more]
G4YUD6_PHYSP	1.680e-50	59.01	Molybdopterin synthase catalytic subunit n=3 Tax=P...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_140	contig	Contig_140:63817..66547 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|176692\|e_gw1.140.29.1
BRITE	ko00000,ko00001,ko01000
KEGG rclass	RC02507
KEGG Reaction	R09395
KEGG Pathway	ko00790,ko01100,ko04122,map00790,map01100,map04122
KEGG ko	ko:K03635
EC	2.8.1.12
Description	Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group
COG category	H
Max annot lvl	4776\|Peronosporales
EggNOG OGs	COG0314@1\|root,KOG3307@2759\|Eukaryota,3Q86W@4776\|Peronosporales
Evalue	2.06e-52
Seed ortholog	272952.HpaP804342
Hectar predicted targeting category	other localisation
Ec32 ortholog description	molybdopterin synthase
Ec32 ortholog	Ec-11_005720.1
TranscriptId	177014
Track	FilteredModels1
ProteinId	176692

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|176692	gene_15626	Tribonema minus UTEX_B_3156	gene	Contig_140 63817..66547 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_15626_1	exon_15626_1	Tribonema minus UTEX_B_3156	exon	Contig_140 63817..64085 +
exon_15626_2	exon_15626_2	Tribonema minus UTEX_B_3156	exon	Contig_140 64843..65008 +
exon_15626_3	exon_15626_3	Tribonema minus UTEX_B_3156	exon	Contig_140 66317..66547 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_15626	CDS_15626	Tribonema minus UTEX_B_3156	CDS	Contig_140 63817..64085 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|176692	Trimin1\|176692\|e_gw1.140.29.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_140 63817..66547 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_140:63817..66547+
coding sequence from alignment at Contig_140:63817..66547+

spliced messenger RNA

>mRNA_15626 ID=mRNA_15626|Name=jgi.p|Trimin1|176692|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=666bp|location=Sequence derived from alignment at Contig_140:63817..66547+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCCGAGGGAGCCGGCAACAGTCCACAAGATCAGAGCAGCAGCAGCGC
CACAGCCACTAGCCCTCATGATCTTGTGATGGTGACAGATCAGCCTCTCG
AGCTGAGCGCCATGGTGGCAGCAGTAGCAGGCCCGAAGTGTGGCGCCATC
TCAACATTTCTTGGCGTCACTAGAGACACGCATAATGGCAAGACAGTAGT
GCGACTGGAGTACGAGGGCTACGCGCCAATGGCAGAGAAGGAGCTCAGGA
AAATCTGCGAGCAGGCGAGGCAAAAGTGGAGCATCGAAAAGATAGCCATT
GCGCATAGGCTGGGTGTGACGGCGGTTGAGGAGGCGAGCGTGATAATTGC
GGTTTCGTCGGTGCACAGGAGGGAGAGCCTGGAGGCGGTGCAGTACTGCA
TTGACACGCTCAAGGCGACAGTGCCCATATGGTATCTGGAGGTATACGAA
GGGGACAGCCGAGTATGGAAGGAGAATGCGGAATGGAGCGGCGGTGGTTG
CTGCAGACAAATGGTGCCCACAAATACCACAGTTGATGGCACATCGGTTG
CTGCCAGTGCTGCGGGCGGAGCGCAGTGTATAGAGACAGTAGCACATGAG
TTGCATGATAGCGGCAGTGGCGCTGGCCAGCACCACCACCACCATGGTCA
TTGCCATGACTGTTAG

protein sequence of jgi.p|Trimin1|176692

>Trimin1|176692|e_gw1.140.29.1 ID=Trimin1|176692|e_gw1.140.29.1|Name=jgi.p|Trimin1|176692|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=222bp
MPEGAGNSPQDQSSSSATATSPHDLVMVTDQPLELSAMVAAVAGPKCGAI
STFLGVTRDTHNGKTVVRLEYEGYAPMAEKELRKICEQARQKWSIEKIAI
AHRLGVTAVEEASVIIAVSSVHRRESLEAVQYCIDTLKATVPIWYLEVYE
GDSRVWKENAEWSGGGCCRQMVPTNTTVDGTSVAASAAGGAQCIETVAHE
LHDSGSGAGQHHHHHGHCHDC*

mRNA from alignment at Contig_140:63817..66547+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_15626 ID=mRNA_15626|Name=jgi.p|Trimin1|176692|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2731bp|location=Sequence derived from alignment at Contig_140:63817..66547+ (Tribonema minus UTEX_B_3156 )
ATGCCCGAGGGAGCCGGCAACAGTCCACAAGATCAGAGCAGCAGCAGCGC
CACAGCCACTAGCCCTCATGATCTTGTGATGGTGACAGATCAGCCTCTCG
AGCTGAGCGCCATGGTGGCAGCAGTAGCAGGCCCGAAGTGTGGCGCCATC
TCAACATTTCTTGGCGTCACTAGAGACACGCATAATGGCAAGACAGTAGT
GCGACTGGAGTACGAGGGCTACGCGCCAATGGCAGAGAAGGAGCTCAGGA
AAATCTGCGAGCAGGCGAGGTGAGCTCTGCTTGCCGAAACAACAGAGGCA
GCTGCTGCTGAGATGGGGCTTGCATCCGCATCAAAGATGCATACGTGTGG
CAAAGGGCACTGTAAAACAGCAAGATGCCTTTGGAGCACCCTTACTGCAA
CTTGGGGTGCATCGCCGGGTGCATGTATATCACGTTATCATGACAAGTAT
TAGCGTCAGCCGTAAAGATACTTGCAGCTGCTGTGACCCTTACTCCTATG
CCATCAACTGCACTGGGACCTTCATGCAGCAGTTCGAGCAATGCGTATCC
TCAAGCAGTACGATTGCAGCCGACTGCTAAACGCCCTCCGTCACGATGCT
GCTGACGATCCAGAGCCAGCACCCATTGGTTGTAGGGCGAGCAGTGCTGC
ACCTTCTGGCTGCCTCTTGACAGTGATAATTACTCCAGGCACATCACCAC
TTCTTCTGCGTTCTCGCTAGTTGAACCTGATTCTCTGTGGCAACGCCCTG
GCAGTGCCTCTGGCAGATGTATGTTTCTGCACAACGCTCGTCCCTGCTTG
CAGTCGCAGGTGCTCAGCGGTAACGTGGGCATGCTCGCTGCCCAACTGCA
CCGTACCGCCGCGCATGCGGGCGAGATATTACATCTGTGTGTACATGCAC
AATCATTGCTGTAGTCATCTTCGACAGGTTGGTATACATCTCCTGCACCC
ATACATACTTACCACCTGCCTCGGCCAGCGCTGGCAGTCTCACCGTGATT
GCACGCTGCTGTCACTGCTGCCGCAGGCAAAAGTGGAGCATCGAAAAGAT
AGCCATTGCGCATAGGCTGGGTGTGACGGCGGTTGAGGAGGCGAGCGTGA
TAATTGCGGTTTCGTCGGTGCACAGGAGGGAGAGCCTGGAGGCGGTGCAG
TACTGCATTGACACGCTCAAGGCGACAGTGCCCATATGGTATGTATGTAT
GTATGGTGCATTGACATGCTCAAGGCGACAGTGCCCATATGGTATGTATG
TATGTATGGTGCATCGACACGCTCAAGGCGACAGTGCCCATATGGTATGT
ATGTATGTATGGTGCATCGACACGCTCAAGGCGACAGTGCCCATATGGCA
TGTATGTATGTATGGTGCATTGACACGCTCAAGGCGACAGTGCCCATATG
GCATGTATGTATGTATGGTGCATTGACACGCTCAAGGCGACAGTGCCCAT
ATGGTATGTATGTATGGTATATGCACAGCACTGCTCAACCCATACAAATT
TATGTATCGTACTTCGACGTATGTGTGTAATGCGCAGATACGCTGATAGC
GACGGTGCCCACATGTAAAGCGACAGTACCCATATAGCAAGCGCAGAGGA
CTACAGTGTAGCCACGAAGGGCATATAGAAGTAGACGCATACACGACTGA
GCAGCTAGCTAGGCATGGCGGCTAGACATGAGGCGAGAGGCGTGTCATGT
CAGCGCTCAACTTAATGTTCTCTTTGCTGTGTGTATACGGCGCTGAGCCA
CGGGCAATGGTGGCGAACTGCTCCAGGATAAAGTGGCAGAGGTCAACACG
TGTCAGACTGGCGTCAGCTTGCTTTCATCCTGGCAGGCCGTAGACAGAGG
ACGAAAGGCGACTGAGGCGTGAGCACAACACAGCAGTTTTACCTCACCTC
AGTGCTCTAACAAGCGCAATGTGGACGTCATGAATGGCATGTCTCAGCAG
ACTAGCATCGTAGCTTGTAAGCTTTGCGGCATGTGAAATGTCTCCATGGA
TAACAGCAGTGCCTTGAATAATGCTGATGCAGCATTGTTGGAACGTAGGC
AGTTCAGTCAGGAATACGTATGCTCGCATCTATGACAGGCAGCAATCAAT
GCACTTCAGGTGAAGTGGGCTTCAGAGCACAACACAACAACTGGCTTGCA
CACAGGAAGGACTGCCAGCCCACCATCTCACACCAATTATGTGTTTGTAC
TTTACTCATGCGTGTCTGGCATTGAGAGGCAAACTTAGCAGAACATCGAA
GCAGCTGCATGCCCTGGAATCGTGAGGCGTTGCAGTTGCACAAGTGTGTG
GCAGCAGGGGCAGCGCAAGGCGCACCTTGTGAAGTTGGCAGCGCTCATAT
ACGTCTAATAGCACCTTCAGCCATACCGCAATGGGCCCGTGACTCTGTTT
GCGCATGCTACCACCGTTACCTCCTTCTAGAGCAACAGCGCTGACAATCC
GCGTGTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCACAGGAAG
CTGGAGGTATACGAAGGGGACAGCCGAGTATGGAAGGAGAATGCGGAATG
GAGCGGCGGTGGTTGCTGCAGACAAATGGTGCCCACAAATACCACAGTTG
ATGGCACATCGGTTGCTGCCAGTGCTGCGGGCGGAGCGCAGTGTATAGAG
ACAGTAGCACATGAGTTGCATGATAGCGGCAGTGGCGCTGGCCAGCACCA
CCACCACCATGGTCATTGCCATGACTGTTAG

Coding sequence (CDS) from alignment at Contig_140:63817..66547+

>mRNA_15626 ID=mRNA_15626|Name=jgi.p|Trimin1|176692|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=666bp|location=Sequence derived from alignment at Contig_140:63817..66547+ (Tribonema minus UTEX_B_3156 )
ATGCCCGAGGGAGCCGGCAACAGTCCACAAGATCAGAGCAGCAGCAGCGC
CACAGCCACTAGCCCTCATGATCTTGTGATGGTGACAGATCAGCCTCTCG
AGCTGAGCGCCATGGTGGCAGCAGTAGCAGGCCCGAAGTGTGGCGCCATC
TCAACATTTCTTGGCGTCACTAGAGACACGCATAATGGCAAGACAGTAGT
GCGACTGGAGTACGAGGGCTACGCGCCAATGGCAGAGAAGGAGCTCAGGA
AAATCTGCGAGCAGGCGAGGCAAAAGTGGAGCATCGAAAAGATAGCCATT
GCGCATAGGCTGGGTGTGACGGCGGTTGAGGAGGCGAGCGTGATAATTGC
GGTTTCGTCGGTGCACAGGAGGGAGAGCCTGGAGGCGGTGCAGTACTGCA
TTGACACGCTCAAGGCGACAGTGCCCATATGGTATCTGGAGGTATACGAA
GGGGACAGCCGAGTATGGAAGGAGAATGCGGAATGGAGCGGCGGTGGTTG
CTGCAGACAAATGGTGCCCACAAATACCACAGTTGATGGCACATCGGTTG
CTGCCAGTGCTGCGGGCGGAGCGCAGTGTATAGAGACAGTAGCACATGAG
TTGCATGATAGCGGCAGTGGCGCTGGCCAGCACCACCACCACCATGGTCA
TTGCCATGACTGTTAG