Trimin1|176450|e_gw1.137.129.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|176450
Unique NameTrimin1|176450|e_gw1.137.129.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length96
Homology
BLAST of jgi.p|Trimin1|176450 vs. uniprot
Match: A0A835ZEJ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEJ6_9STRA)

HSP 1 Score: 169 bits (429), Expect = 3.890e-53
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
Query:    1 MTRPQLRAACAALAAAAARGAELRTIPAASARALVAEGGAAAAAAEPHSLLRIRRELLDVLMPFQREGVRFALERGGRCLIADEMGTGKTIQVRG 95
            MTRPQLRAACAALAAAAARGAELRTIPAASARALVAEGGAAAAAAEPHSLLRIRRELLDVLMPFQREGVRFALERGGRCLIADEMGTGKTIQVRG
Sbjct:    1 MTRPQLRAACAALAAAAARGAELRTIPAASARALVAEGGAAAAAAEPHSLLRIRRELLDVLMPFQREGVRFALERGGRCLIADEMGTGKTIQVRG 95          
BLAST of jgi.p|Trimin1|176450 vs. uniprot
Match: A0A392Q8B9_9FABA (DNA annealing helicase and endonuclease ZRANB3-like n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392Q8B9_9FABA)

HSP 1 Score: 68.9 bits (167), Expect = 3.350e-13
Identity = 30/42 (71.43%), Postives = 37/42 (88.10%), Query Frame = 0
Query:   52 RIRRELLDVLMPFQREGVRFALERGGRCLIADEMGTGKTIQV 93
            ++ + LLDVL+PFQ +G+RFAL RGGRCLIADEMG GKT+QV
Sbjct:   50 KLPKSLLDVLLPFQMDGLRFALRRGGRCLIADEMGLGKTLQV 91          
BLAST of jgi.p|Trimin1|176450 vs. uniprot
Match: A0A836Y019_9ROSI (DNA annealing helicase and endonuclease ZRANB n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836Y019_9ROSI)

HSP 1 Score: 66.6 bits (161), Expect = 1.900e-12
Identity = 28/40 (70.00%), Postives = 35/40 (87.50%), Query Frame = 0
Query:   55 RELLDVLMPFQREGVRFALERGGRCLIADEMGTGKTIQVR 94
            R+LLD L+PFQ +G+RF L RGGRCLIADEMG GKT+Q++
Sbjct:   23 RKLLDALLPFQLDGLRFGLRRGGRCLIADEMGLGKTLQIK 62          
BLAST of jgi.p|Trimin1|176450 vs. uniprot
Match: A0A8J5LKL1_ZINOF (Uncharacterized protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5LKL1_ZINOF)

HSP 1 Score: 69.3 bits (168), Expect = 3.380e-12
Identity = 32/44 (72.73%), Postives = 38/44 (86.36%), Query Frame = 0
Query:   50 LLRIRRELLDVLMPFQREGVRFALERGGRCLIADEMGTGKTIQV 93
            L+++ + L D L+PFQ EGVRFAL+RGGRCLIADEMG GKTIQV
Sbjct:  176 LVKLPKTLRDSLLPFQLEGVRFALQRGGRCLIADEMGLGKTIQV 219          
BLAST of jgi.p|Trimin1|176450 vs. uniprot
Match: A0A2N9II73_FAGSY (Helicase ATP-binding domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9II73_FAGSY)

HSP 1 Score: 69.7 bits (169), Expect = 8.200e-12
Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = 0
Query:   50 LLRIRRELLDVLMPFQREGVRFALERGGRCLIADEMGTGKTIQV 93
            + ++ R LLD L+PFQ EGVRFAL RGGRCLIADEMG GKT+Q 
Sbjct:  194 ITKLPRTLLDTLLPFQHEGVRFALRRGGRCLIADEMGLGKTLQA 237          
BLAST of jgi.p|Trimin1|176450 vs. uniprot
Match: S8DS73_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8DS73_9LAMI)

HSP 1 Score: 66.6 bits (161), Expect = 1.400e-11
Identity = 30/44 (68.18%), Postives = 36/44 (81.82%), Query Frame = 0
Query:   50 LLRIRRELLDVLMPFQREGVRFALERGGRCLIADEMGTGKTIQV 93
            LL++ + LL+ L+PFQ EGVRF L RGGRCLIADEMG GKT+Q 
Sbjct:  123 LLKLPKSLLNSLLPFQLEGVRFGLRRGGRCLIADEMGLGKTLQA 166          
BLAST of jgi.p|Trimin1|176450 vs. uniprot
Match: A0A7J0FYK6_9ERIC (SNF2 domain-containing protein n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0FYK6_9ERIC)

HSP 1 Score: 68.6 bits (166), Expect = 1.750e-11
Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = 0
Query:   50 LLRIRRELLDVLMPFQREGVRFALERGGRCLIADEMGTGKTIQV 93
            L ++ + LLD LMPFQ EGVRF L+RGGRCLIADEMG GKT+Q 
Sbjct:  194 LKKLPKTLLDALMPFQLEGVRFGLQRGGRCLIADEMGLGKTLQA 237          
BLAST of jgi.p|Trimin1|176450 vs. uniprot
Match: A0A2R6QH64_ACTCC (Endonuclease n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6QH64_ACTCC)

HSP 1 Score: 68.6 bits (166), Expect = 2.060e-11
Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = 0
Query:   50 LLRIRRELLDVLMPFQREGVRFALERGGRCLIADEMGTGKTIQV 93
            L ++ + LLD LMPFQ EGVRF L+RGGRCLIADEMG GKT+Q 
Sbjct:   17 LKKLLKTLLDALMPFQLEGVRFGLQRGGRCLIADEMGLGKTLQA 60          
BLAST of jgi.p|Trimin1|176450 vs. uniprot
Match: UPI0009E28EEC (DNA annealing helicase and endonuclease ZRANB3 isoform X1 n=3 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E28EEC)

HSP 1 Score: 68.2 bits (165), Expect = 2.830e-11
Identity = 31/44 (70.45%), Postives = 35/44 (79.55%), Query Frame = 0
Query:   50 LLRIRRELLDVLMPFQREGVRFALERGGRCLIADEMGTGKTIQV 93
            L ++ R L D L+PFQ EGVRF L+RGGRCLIADEMG GKTIQ 
Sbjct:  198 LTKLPRSLRDALLPFQMEGVRFGLQRGGRCLIADEMGLGKTIQA 241          
BLAST of jgi.p|Trimin1|176450 vs. uniprot
Match: A0A5N5G203_9ROSA (DNA annealing helicase and endonuclease ZRANB3 n=5 Tax=Maleae TaxID=721813 RepID=A0A5N5G203_9ROSA)

HSP 1 Score: 68.2 bits (165), Expect = 2.830e-11
Identity = 29/42 (69.05%), Postives = 36/42 (85.71%), Query Frame = 0
Query:   52 RIRRELLDVLMPFQREGVRFALERGGRCLIADEMGTGKTIQV 93
            ++ ++LLD L+PFQ EGVRF L+RGGRCLIADEMG GKT+Q 
Sbjct:  203 KLPKKLLDALLPFQHEGVRFGLQRGGRCLIADEMGLGKTLQA 244          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|176450 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZEJ6_9STRA3.890e-53100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A392Q8B9_9FABA3.350e-1371.43DNA annealing helicase and endonuclease ZRANB3-lik... [more]
A0A836Y019_9ROSI1.900e-1270.00DNA annealing helicase and endonuclease ZRANB n=1 ... [more]
A0A8J5LKL1_ZINOF3.380e-1272.73Uncharacterized protein n=1 Tax=Zingiber officinal... [more]
A0A2N9II73_FAGSY8.200e-1270.45Helicase ATP-binding domain-containing protein n=1... [more]
S8DS73_9LAMI1.400e-1168.18Uncharacterized protein (Fragment) n=1 Tax=Genlise... [more]
A0A7J0FYK6_9ERIC1.750e-1170.45SNF2 domain-containing protein n=1 Tax=Actinidia r... [more]
A0A2R6QH64_ACTCC2.060e-1170.45Endonuclease n=1 Tax=Actinidia chinensis var. chin... [more]
UPI0009E28EEC2.830e-1170.45DNA annealing helicase and endonuclease ZRANB3 iso... [more]
A0A5N5G203_9ROSA2.830e-1169.05DNA annealing helicase and endonuclease ZRANB3 n=5... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 31..94
e-value: 2.4E-11
score: 44.9
NoneNo IPR availablePANTHERPTHR45766DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBERcoord: 39..92
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 54..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_137contigContig_137:166849..167136 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|176450mRNA_13801Tribonema minus UTEX_B_3156 mRNAContig_137 166849..167136 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|176450|e_gw1.137.129.1 ID=Trimin1|176450|e_gw1.137.129.1|Name=jgi.p|Trimin1|176450|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=96bp
MTRPQLRAACAALAAAAARGAELRTIPAASARALVAEGGAAAAAAEPHSL
LRIRRELLDVLMPFQREGVRFALERGGRCLIADEMGTGKTIQVRG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038718SNF2-like_sf
IPR027417P-loop_NTPase