Trimin1|347498|estExt_Genemark1.C_Ctg_120142 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347498
Unique NameTrimin1|347498|estExt_Genemark1.C_Ctg_120142
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1341
Homology
BLAST of jgi.p|Trimin1|347498 vs. uniprot
Match: A0A835ZAZ8_9STRA (Cyclic nucleotide-binding domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAZ8_9STRA)

HSP 1 Score: 1976 bits (5118), Expect = 0.000e+0
Identity = 1216/1216 (100.00%), Postives = 1216/1216 (100.00%), Query Frame = 0
Query:  126 PQVQRNDAAFLELVAELIADGVAADMEREGAAARRSGAEEHAVLRRVMGLWLGMGMREAFADWKAWTKRRIKLRRRDRHQAVRQAWQRYETNSVAMEMARWNVGKRRQSPHSLPHLRLRTRARSQWSEQWDAYNDVPFWVHATTGAIRWDPPTVPEYLPPGYQEPAPPSDRVEDLSESESEWSDGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAHDSARRAASAAEQQLLALENGAAPALPLLAIEAGTGAQHQEALMVTGAAEWQSAALVSSPGGALDAYAAGGGGSGGDVYDAASGGEMVPYSDEPDPLAATAARVAKARVVEAERAARRMKATRRRHVEQEGKMRQLAKLHPGALFGAMALISLAGRTAVVAATDDCGVLKERAEARAEAARTGSMQAPLKIEEAMAVVGYDRDVDYSHEQMTAMAATAMELMLKQKGDTKALDKYGTYSKTLLGTKVESDSGRAGVTFRPTATDRVRQGDLQHGAHSAAHRXXXXXXXXNYFLVGVADAIGGVARNTRTRLSERTRLLIHWALYALHLAVFASLVAAVAVLNARHGDGVALSLPLALACALSLVPAAAALGRGAALPPGPLVDGYMALAPVASPSAYQVALLWCSGLGLGVFGVWGSASALVAVLETVPHDEPGELRAFVAAAAVGIACSGAFLCVFAAXXXXXXXXXXXXXXXXXXXRVDSFWDFLAALYSSSGAMLLINVYGIVDLSATGRIVSAEQVGLMRVAATEGGWHSIKFFSLFAVIFADVLLACGLIALSVTTFSGYSTVAFVIVDILESFLEAQHLFQTWAGALYRRGDYHGLHALQAAADAPCKYLSYGGYRLAEVQPAARSALHSIGPELPALLPQLLAWAFTNGAKMAPWVLFHAASCGTLEVAQFVFANMAPRRGHMFQNVPVCRAAAARGDLEMLQWARDQGFYWDTYTRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHAMSGRLVAKEASKXXXXXXXXXXXXXXXXXXPSTCEAPSFAAASDNDTLGSNSLVIHQAQPREVYIRPRGAREALRVDYSGAVKALVGMDHNTLAGSALSWVDVESELPRLEDGAGSAMQLAWPSQSFARVGSELERSSSADARDRAVVDWACAMTSTPAVRNALAESLASVPPPSFLQAEWSDVDVGDGSVAS 1341
            PQVQRNDAAFLELVAELIADGVAADMEREGAAARRSGAEEHAVLRRVMGLWLGMGMREAFADWKAWTKRRIKLRRRDRHQAVRQAWQRYETNSVAMEMARWNVGKRRQSPHSLPHLRLRTRARSQWSEQWDAYNDVPFWVHATTGAIRWDPPTVPEYLPPGYQEPAPPSDRVEDLSESESEWSDGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAHDSARRAASAAEQQLLALENGAAPALPLLAIEAGTGAQHQEALMVTGAAEWQSAALVSSPGGALDAYAAGGGGSGGDVYDAASGGEMVPYSDEPDPLAATAARVAKARVVEAERAARRMKATRRRHVEQEGKMRQLAKLHPGALFGAMALISLAGRTAVVAATDDCGVLKERAEARAEAARTGSMQAPLKIEEAMAVVGYDRDVDYSHEQMTAMAATAMELMLKQKGDTKALDKYGTYSKTLLGTKVESDSGRAGVTFRPTATDRVRQGDLQHGAHSAAHRXXXXXXXXNYFLVGVADAIGGVARNTRTRLSERTRLLIHWALYALHLAVFASLVAAVAVLNARHGDGVALSLPLALACALSLVPAAAALGRGAALPPGPLVDGYMALAPVASPSAYQVALLWCSGLGLGVFGVWGSASALVAVLETVPHDEPGELRAFVAAAAVGIACSGAFLCVFAAXXXXXXXXXXXXXXXXXXXRVDSFWDFLAALYSSSGAMLLINVYGIVDLSATGRIVSAEQVGLMRVAATEGGWHSIKFFSLFAVIFADVLLACGLIALSVTTFSGYSTVAFVIVDILESFLEAQHLFQTWAGALYRRGDYHGLHALQAAADAPCKYLSYGGYRLAEVQPAARSALHSIGPELPALLPQLLAWAFTNGAKMAPWVLFHAASCGTLEVAQFVFANMAPRRGHMFQNVPVCRAAAARGDLEMLQWARDQGFYWDTYTRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHAMSGRLVAKEASKXXXXXXXXXXXXXXXXXXPSTCEAPSFAAASDNDTLGSNSLVIHQAQPREVYIRPRGAREALRVDYSGAVKALVGMDHNTLAGSALSWVDVESELPRLEDGAGSAMQLAWPSQSFARVGSELERSSSADARDRAVVDWACAMTSTPAVRNALAESLASVPPPSFLQAEWSDVDVGDGSVAS
Sbjct:  126 PQVQRNDAAFLELVAELIADGVAADMEREGAAARRSGAEEHAVLRRVMGLWLGMGMREAFADWKAWTKRRIKLRRRDRHQAVRQAWQRYETNSVAMEMARWNVGKRRQSPHSLPHLRLRTRARSQWSEQWDAYNDVPFWVHATTGAIRWDPPTVPEYLPPGYQEPAPPSDRVEDLSESESEWSDGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAHDSARRAASAAEQQLLALENGAAPALPLLAIEAGTGAQHQEALMVTGAAEWQSAALVSSPGGALDAYAAGGGGSGGDVYDAASGGEMVPYSDEPDPLAATAARVAKARVVEAERAARRMKATRRRHVEQEGKMRQLAKLHPGALFGAMALISLAGRTAVVAATDDCGVLKERAEARAEAARTGSMQAPLKIEEAMAVVGYDRDVDYSHEQMTAMAATAMELMLKQKGDTKALDKYGTYSKTLLGTKVESDSGRAGVTFRPTATDRVRQGDLQHGAHSAAHRXXXXXXXXNYFLVGVADAIGGVARNTRTRLSERTRLLIHWALYALHLAVFASLVAAVAVLNARHGDGVALSLPLALACALSLVPAAAALGRGAALPPGPLVDGYMALAPVASPSAYQVALLWCSGLGLGVFGVWGSASALVAVLETVPHDEPGELRAFVAAAAVGIACSGAFLCVFAAXXXXXXXXXXXXXXXXXXXRVDSFWDFLAALYSSSGAMLLINVYGIVDLSATGRIVSAEQVGLMRVAATEGGWHSIKFFSLFAVIFADVLLACGLIALSVTTFSGYSTVAFVIVDILESFLEAQHLFQTWAGALYRRGDYHGLHALQAAADAPCKYLSYGGYRLAEVQPAARSALHSIGPELPALLPQLLAWAFTNGAKMAPWVLFHAASCGTLEVAQFVFANMAPRRGHMFQNVPVCRAAAARGDLEMLQWARDQGFYWDTYTRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHAMSGRLVAKEASKXXXXXXXXXXXXXXXXXXPSTCEAPSFAAASDNDTLGSNSLVIHQAQPREVYIRPRGAREALRVDYSGAVKALVGMDHNTLAGSALSWVDVESELPRLEDGAGSAMQLAWPSQSFARVGSELERSSSADARDRAVVDWACAMTSTPAVRNALAESLASVPPPSFLQAEWSDVDVGDGSVAS 1341          
BLAST of jgi.p|Trimin1|347498 vs. uniprot
Match: A0A6H5KAI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI0_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 1.530e-28
Identity = 76/194 (39.18%), Postives = 100/194 (51.55%), Query Frame = 0
Query:  130 RNDAAFLELVAELIADGVAADMEREGAAARRSGAEEHA------------------VLRRVMGLWLGMGMREAFADWKAWTKRRIKLRRRDRHQAVRQAWQRYETNSVAMEMARWNVGKRRQSPHSLPHLRLRTRARSQWSEQWDAYNDVPFWVHATTGAIRWDPPTVPEYLPPGYQEPAPPSDRVEDLSESES 305
            + D  F E+V E++ D V  DME  G  ARR   +EH                   V RR+M +WLG+GMRE+FA+WK WTK+RI  RR+D  +A+R+AW  YE   V   MA W                      S W E++D Y D   W H  TG +R   PTV E++P GY+ P PPS R+ED+S + S
Sbjct:  429 KRDKEFQEIVDEMVVDLVLQDMEAAGENARRKAEQEHEARLWKQFIIPSFQSDAPRVFRRIMAMWLGVGMRESFAEWKIWTKKRISQRRKDARKALREAWHNYEAAGVVSVMAEWKA--------------------SFWEEEYDIYTDTQTWRHKETGDVRTVRPTVEEFIPDGYEVPKPPSQRLEDMSSTGS 602          
BLAST of jgi.p|Trimin1|347498 vs. uniprot
Match: D8LMJ1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMJ1_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 6.370e-22
Identity = 59/140 (42.14%), Postives = 78/140 (55.71%), Query Frame = 0
Query:  127 QVQRNDAAFLELVAELIADGVAADMEREGAAARRSGAEEHAVLRRVMGLWLGMGMREAFADWKAWTKRRIKLRRRDRHQAVRQAWQRYETNSVAMEMARWNVGKRRQSPHSLPHLRLRTRARSQWSEQWDAYNDVPFWVH 266
            +V+R D  F E+V E++ D V  DME  G +ARR   +EH V RR+M +WLG+GMRE+FA+WK WTK+RI  RR+D  +A+R+AW  YE   V   MA W                      S W E++D Y D   W H
Sbjct:  728 KVKRGDKEFQEIVDEMVVDLVLQDMEAAGESARRKAEQEHEVFRRIMAMWLGVGMRESFAEWKIWTKKRISQRRKDARKALREAWHDYEAAGVVSVMAEWKA--------------------SFWEEEYDIYTDTQTWRH 847          
BLAST of jgi.p|Trimin1|347498 vs. uniprot
Match: A0A835YKR1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKR1_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.730e-16
Identity = 47/76 (61.84%), Postives = 53/76 (69.74%), Query Frame = 0
Query: 1004 LLAWAFTNGAKMAPWVLFHAASCGTLEVAQFVFANMAPRRGHMFQNVPVCRAAAARGDLEMLQWARDQGFYWDTYT 1079
            L+ WA TNG KM   +L HA+ CGTL V QFVFAN       M Q+VPVC AAAARGDLEMLQWAR QG +W+  T
Sbjct:    7 LIQWALTNGCKMTIALLHHASVCGTLRVVQFVFANNRAPLNDMLQDVPVCEAAAARGDLEMLQWARAQGSHWNALT 82          
BLAST of jgi.p|Trimin1|347498 vs. uniprot
Match: A0A836CGX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGX3_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.180e-13
Identity = 44/77 (57.14%), Postives = 51/77 (66.23%), Query Frame = 0
Query: 1004 LLAWAFTNGAKMAPWVLFHAASCGTLEVAQFVFANMAPRRGHM-FQNVPVCRAAAARGDLEMLQWARDQGFYWDTYT 1079
            LL WA  NG +M   +L HAA+  +L+V Q V  N A RRG M    VPVC AAA RGDL MLQWAR +GF+WD YT
Sbjct:   47 LLRWALANGCEMTTGLLHHAAAFSSLKVVQCVLVNTAHRRGDMRVWRVPVCNAAAERGDLAMLQWARAEGFHWDAYT 123          
BLAST of jgi.p|Trimin1|347498 vs. uniprot
Match: A0A835YYW4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYW4_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 2.890e-11
Identity = 40/77 (51.95%), Postives = 46/77 (59.74%), Query Frame = 0
Query: 1003 QLLAWAFTNGAKMAPWVLFHAASCGTLEVAQFVFANMAPRRGHMFQNVPVCRAAAARGDLEMLQWARDQGFYWDTYT 1079
            QL  WA  NG K    +L HAA+CG LEV + +  N A       QN  VC AAAARG+LEMLQWAR   F+W T T
Sbjct:   23 QLSTWAIANGCKADTSLLRHAAACGPLEVVRHLHENYAHCIDPPAQNESVCEAAAARGNLEMLQWARAHNFHWGTRT 99          
BLAST of jgi.p|Trimin1|347498 vs. uniprot
Match: A0A7S1BRV4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BRV4_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 3.720e-10
Identity = 46/134 (34.33%), Postives = 68/134 (50.75%), Query Frame = 0
Query:  151 MEREGAAARRSGAEEHAVLRRVMGLWLGMGMREAFADWKAWTKRRIKLRRRDRHQAVRQAWQRYETNSVAMEMARWNVGKRRQSPHSLPHLRLRTRARSQWSEQWDAYNDVPFWVHATTGAIRWDPPTVPEYLP 284
            +ERE + +R+     +   R+VM  WL + + E F  WK+WTK R+  +RR+    VR           A ++AR N         SL ++ L      +W+E WD +ND+PFWVH  TG   W+ P +  YLP
Sbjct:  784 VEREVSTSRKKTMRNNETYRKVMLRWLDLCLYERFDAWKSWTKERLVQKRRE----VR----------AANQLARINY------EDSLAYIVLANDKLQKWTEHWDDFNDMPFWVHGDTGETVWEEPVLELYLP 897          
BLAST of jgi.p|Trimin1|347498 vs. uniprot
Match: A0A835ZBQ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBQ7_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 7.920e-8
Identity = 38/85 (44.71%), Postives = 45/85 (52.94%), Query Frame = 0
Query: 1004 LLAWAFTNGAKMAPWVLFHAASCGTLEVAQFVFANMAPRRGHMFQN---------VPVCRAAAARGDLEMLQWARDQGFYWDTYT 1079
            L+ WA  NG K    V  HAA+CG L V Q++        G  F N           VC+AAA+RGD+EMLQWAR  GF WD  T
Sbjct:    7 LIQWAVANGCKRTSLVR-HAATCGILAVVQYMLET-----GTAFDNDLYFKKKTKTLVCKAAASRGDIEMLQWARAHGFVWDART 85          
BLAST of jgi.p|Trimin1|347498 vs. uniprot
Match: A0A835Z2I4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2I4_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 2.760e-5
Identity = 32/76 (42.11%), Postives = 40/76 (52.63%), Query Frame = 0
Query: 1004 LLAWAFTNGAKMAPWVLFHAASCGTLEVAQFVFANMAPRRGHMFQNVPVCRAAAARGDLEMLQWARDQGFYWDTYT 1079
            L+ WA  NG K    +L+ A      EV  ++ A  A      F++  +CR AA RG LEMLQW R QGF W T T
Sbjct:    7 LIQWAIANGCKETTKLLWSAVIRSPFEVVLYLHALGAQWGIDAFRDTWLCRTAAERGHLEMLQWVRAQGFAWGTCT 82          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347498 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A835ZAZ8_9STRA0.000e+0100.00Cyclic nucleotide-binding domain-containing protei... [more]
A0A6H5KAI0_9PHAE1.530e-2839.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMJ1_ECTSI6.370e-2242.14Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A835YKR1_9STRA1.730e-1661.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CGX3_9STRA1.180e-1357.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YYW4_9STRA2.890e-1151.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1BRV4_9STRA3.720e-1034.33Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A835ZBQ7_9STRA7.920e-844.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z2I4_9STRA2.760e-542.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 458..478
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 306..350
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 276..364
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..50
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 988..1167
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 1049..1145
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 492..526
score: 7.3046

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_12contigContig_12:1245912..1261639 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347498mRNA_3814Tribonema minus UTEX_B_3156 mRNAContig_12 1245912..1261639 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347498|estExt_Genemark1.C_Ctg_120142 ID=Trimin1|347498|estExt_Genemark1.C_Ctg_120142|Name=jgi.p|Trimin1|347498|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1341bp
MSPLPLPLPLPLPLPLPLPLPLPLPMLPPPPPPPPPPQPPQVQHRHRHLG
RRTLTTACAHTIAAAAAAAAATAAAAATVAAAAAAAAAAAAAAAAAAAAA
AAAAAPAHACNSPSPPPPSPPLPLPPQVQRNDAAFLELVAELIADGVAAD
MEREGAAARRSGAEEHAVLRRVMGLWLGMGMREAFADWKAWTKRRIKLRR
RDRHQAVRQAWQRYETNSVAMEMARWNVGKRRQSPHSLPHLRLRTRARSQ
WSEQWDAYNDVPFWVHATTGAIRWDPPTVPEYLPPGYQEPAPPSDRVEDL
SESESEWSDGGSSSASGSHASSRGSGGSSSGSDSEGSSGSSSGGSRSSSG
RRGSRAHDSARRAASAAEQQLLALENGAAPALPLLAIEAGTGAQHQEALM
VTGAAEWQSAALVSSPGGALDAYAAGGGGSGGDVYDAASGGEMVPYSDEP
DPLAATAARVAKARVVEAERAARRMKATRRRHVEQEGKMRQLAKLHPGAL
FGAMALISLAGRTAVVAATDDCGVLKERAEARAEAARTGSMQAPLKIEEA
MAVVGYDRDVDYSHEQMTAMAATAMELMLKQKGDTKALDKYGTYSKTLLG
TKVESDSGRAGVTFRPTATDRVRQGDLQHGAHSAAHRHHHHHYHHNYFLV
GVADAIGGVARNTRTRLSERTRLLIHWALYALHLAVFASLVAAVAVLNAR
HGDGVALSLPLALACALSLVPAAAALGRGAALPPGPLVDGYMALAPVASP
SAYQVALLWCSGLGLGVFGVWGSASALVAVLETVPHDEPGELRAFVAAAA
VGIACSGAFLCVFAAAAASARSSAASVTVLLRRRRVDSFWDFLAALYSSS
GAMLLINVYGIVDLSATGRIVSAEQVGLMRVAATEGGWHSIKFFSLFAVI
FADVLLACGLIALSVTTFSGYSTVAFVIVDILESFLEAQHLFQTWAGALY
RRGDYHGLHALQAAADAPCKYLSYGGYRLAEVQPAARSALHSIGPELPAL
LPQLLAWAFTNGAKMAPWVLFHAASCGTLEVAQFVFANMAPRRGHMFQNV
PVCRAAAARGDLEMLQWARDQGFYWDTYTRQAAARGGHLELLKWAHANGC
PLDSSMCYAAASGGRLEVLRWARDVGCEWDEVTCNAAAVGGHLDILHAMS
GRLVAKEASKAAAAAAAAVAAVSATAATPSTCEAPSFAAASDNDTLGSNS
LVIHQAQPREVYIRPRGAREALRVDYSGAVKALVGMDHNTLAGSALSWVD
VESELPRLEDGAGSAMQLAWPSQSFARVGSELERSSSADARDRAVVDWAC
AMTSTPAVRNALAESLASVPPPSFLQAEWSDVDVGDGSVAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000595cNMP-bd_dom