mRNA_12236 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|351736
Unique NamemRNA_12236
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|351736 vs. uniprot
Match: A0A836C6U7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6U7_9STRA)

HSP 1 Score: 1182 bits (3059), Expect = 0.000e+0
Identity = 769/769 (100.00%), Postives = 769/769 (100.00%), Query Frame = 1
Query:    1 MSACSRAGNWQEALVLVSELRQRGMEPDLITGGQWCEALDVLDGLPAPLAPNVHTFNAALAACAAARQWDPAMELFHAMARRGVVDVVSFNTAISVLARMRQGQRAPADARTLAQLPPRRGGIGALGARRDAITPSPSLRGDAPQEMQAAGIRPDAVTFGALALACERSAPPLHRRASGLLREMREAGVAPTNATFASVISTVGSRHVRTGSQKCFVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVGADQAITLLNHMEALGTPPNAICLQAALTACERANSNNSADCALDVFTRMRARFGGXXXXXXXXXXARGADAEWTKRGPAAYATAIRACQKNGRWRDACALLGEMRAEPWCTSDYDQCDYDQWYSALALLAGDVPDPSRPVPTLKTYLAAMAGAASAGRWEETLTLLGGMEVQGPQQRGNXXXXXXXXXXXXLQPGAVGYGAALEALATAGEHERGLALFEQTRGKAGFTPDVLCFTAALSCCHGVGDWQRALVYMREATEARLLPTRRMRLLAARTCRAAERHDELWGLYADMQMGSSXXXXXXXXXXXXDVAFLTEVLEGCGAARRADRVVELLYKQQSLCDDRALTLAALEALAAAXXXXXAADAILARAVAHGALRDPCLTLPAVDLAGLGPGAAAAVARHAXXXXXXXXPQTGAGLTLVGARGGXXXLAAAAQELERLGLVPQLARXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEAELPDTNGATDAER 2307
            MSACSRAGNWQEALVLVSELRQRGMEPDLITGGQWCEALDVLDGLPAPLAPNVHTFNAALAACAAARQWDPAMELFHAMARRGVVDVVSFNTAISVLARMRQGQRAPADARTLAQLPPRRGGIGALGARRDAITPSPSLRGDAPQEMQAAGIRPDAVTFGALALACERSAPPLHRRASGLLREMREAGVAPTNATFASVISTVGSRHVRTGSQKCFVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVGADQAITLLNHMEALGTPPNAICLQAALTACERANSNNSADCALDVFTRMRARFGGXXXXXXXXXXARGADAEWTKRGPAAYATAIRACQKNGRWRDACALLGEMRAEPWCTSDYDQCDYDQWYSALALLAGDVPDPSRPVPTLKTYLAAMAGAASAGRWEETLTLLGGMEVQGPQQRGNXXXXXXXXXXXXLQPGAVGYGAALEALATAGEHERGLALFEQTRGKAGFTPDVLCFTAALSCCHGVGDWQRALVYMREATEARLLPTRRMRLLAARTCRAAERHDELWGLYADMQMGSSXXXXXXXXXXXXDVAFLTEVLEGCGAARRADRVVELLYKQQSLCDDRALTLAALEALAAAXXXXXAADAILARAVAHGALRDPCLTLPAVDLAGLGPGAAAAVARHAXXXXXXXXPQTGAGLTLVGARGGXXXLAAAAQELERLGLVPQLARXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEAELPDTNGATDAER
Sbjct:    1 MSACSRAGNWQEALVLVSELRQRGMEPDLITGGQWCEALDVLDGLPAPLAPNVHTFNAALAACAAARQWDPAMELFHAMARRGVVDVVSFNTAISVLARMRQGQRAPADARTLAQLPPRRGGIGALGARRDAITPSPSLRGDAPQEMQAAGIRPDAVTFGALALACERSAPPLHRRASGLLREMREAGVAPTNATFASVISTVGSRHVRTGSQKCFVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVGADQAITLLNHMEALGTPPNAICLQAALTACERANSNNSADCALDVFTRMRARFGGXXXXXXXXXXARGADAEWTKRGPAAYATAIRACQKNGRWRDACALLGEMRAEPWCTSDYDQCDYDQWYSALALLAGDVPDPSRPVPTLKTYLAAMAGAASAGRWEETLTLLGGMEVQGPQQRGNXXXXXXXXXXXXLQPGAVGYGAALEALATAGEHERGLALFEQTRGKAGFTPDVLCFTAALSCCHGVGDWQRALVYMREATEARLLPTRRMRLLAARTCRAAERHDELWGLYADMQMGSSXXXXXXXXXXXXDVAFLTEVLEGCGAARRADRVVELLYKQQSLCDDRALTLAALEALAAAXXXXXAADAILARAVAHGALRDPCLTLPAVDLAGLGPGAAAAVARHAXXXXXXXXPQTGAGLTLVGARGGXXXLAAAAQELERLGLVPQLARXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEAELPDTNGATDAER 769          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351736 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836C6U7_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_99contigContig_99:110571..122005 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|351736|estExt_Genemark1.C_Ctg_990011
Descriptionendonuclease activity
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsKOG4197@1|root,KOG4197@2759|Eukaryota
Evalue1.53e-26
Seed ortholog2880.D7FNK0
Hectar predicted targeting categoryother localisation
TranscriptId352058
TrackFilteredModels1
ProteinId351736
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351736gene_12236Tribonema minus UTEX_B_3156 geneContig_99 110571..122005 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351736Trimin1|351736|estExt_Genemark1.C_Ctg_990011Tribonema minus UTEX_B_3156 polypeptideContig_99 110571..122005 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12236_17exon_12236_17Tribonema minus UTEX_B_3156 exonContig_99 110571..111059 -
exon_12236_16exon_12236_16Tribonema minus UTEX_B_3156 exonContig_99 111458..111688 -
exon_12236_15exon_12236_15Tribonema minus UTEX_B_3156 exonContig_99 112158..112243 -
exon_12236_14exon_12236_14Tribonema minus UTEX_B_3156 exonContig_99 113055..113196 -
exon_12236_13exon_12236_13Tribonema minus UTEX_B_3156 exonContig_99 113366..113419 -
exon_12236_12exon_12236_12Tribonema minus UTEX_B_3156 exonContig_99 113949..114081 -
exon_12236_11exon_12236_11Tribonema minus UTEX_B_3156 exonContig_99 114203..114217 -
exon_12236_10exon_12236_10Tribonema minus UTEX_B_3156 exonContig_99 115446..115507 -
exon_12236_9exon_12236_9Tribonema minus UTEX_B_3156 exonContig_99 116603..116839 -
exon_12236_8exon_12236_8Tribonema minus UTEX_B_3156 exonContig_99 117842..117884 -
exon_12236_7exon_12236_7Tribonema minus UTEX_B_3156 exonContig_99 118124..118225 -
exon_12236_6exon_12236_6Tribonema minus UTEX_B_3156 exonContig_99 118312..118413 -
exon_12236_5exon_12236_5Tribonema minus UTEX_B_3156 exonContig_99 118496..118674 -
exon_12236_4exon_12236_4Tribonema minus UTEX_B_3156 exonContig_99 118827..118943 -
exon_12236_3exon_12236_3Tribonema minus UTEX_B_3156 exonContig_99 119852..120077 -
exon_12236_2exon_12236_2Tribonema minus UTEX_B_3156 exonContig_99 121194..121268 -
exon_12236_1exon_12236_1Tribonema minus UTEX_B_3156 exonContig_99 121989..122005 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12236CDS_12236Tribonema minus UTEX_B_3156 CDSContig_99 121989..122005 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12236 ID=mRNA_12236|Name=jgi.p|Trimin1|351736|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2310bp|location=Sequence derived from alignment at Contig_99:110571..122005- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGCGCATGCAGCAGGGCGGGCAACTGGCAGGAGGCGCTGGTGCTGGT
GTCGGAGCTGCGGCAGAGGGGCATGGAGCCGGACCTCATCACGGGCGGGC
AGTGGTGCGAGGCGCTCGACGTCCTGGACGGCCTCCCCGCACCCCTCGCG
CCCAACGTACACACGTTCAACGCCGCGCTCGCCGCGTGCGCGGCCGCGCG
CCAGTGGGACCCTGCGATGGAGCTGTTTCACGCCATGGCAAGGCGCGGCG
TGGTTGATGTGGTATCATTCAATACCGCCATAAGTGTGCTCGCGAGGATG
CGCCAGGGGCAGCGCGCGCCCGCGGACGCTCGCACGCTGGCGCAGCTGCC
CCCCCGCCGCGGGGGGATAGGCGCGTTGGGCGCCCGTCGCGACGCCATCA
CGCCCTCACCGTCCCTTCGCGGCGACGCGCCGCAGGAGATGCAAGCGGCG
GGCATCCGGCCGGACGCCGTCACGTTTGGCGCGCTCGCGCTCGCCTGCGA
GCGCAGCGCGCCACCGCTGCACCGCCGCGCCTCCGGCCTGCTGCGCGAGA
TGCGCGAGGCGGGCGTCGCGCCCACTAACGCGACGTTCGCCAGCGTGATA
TCCACAGTCGGCAGTCGGCACGTGCGTACTGGCAGCCAGAAGTGCTTTGT
TAAGCGCGAGGCAAGCGTCGCGCCCACCACCGCGACGTTCGCCAGCGTCA
TATCCACGGTTGGCAGTTTGCGGGTGTGTTGTGGCGCTCAGAAAGTGCTC
ATTAGGCGCGAGGCGGGCGTCGCGTCTACGATTGGGACGTTCGCCAGCAT
CATATCCACGGTCGGCAGGGTCGGCGCTGACCAGGCCATCACGCTGCTGA
ACCACATGGAGGCCCTGGGGACTCCGCCGAACGCCATCTGCCTGCAGGCG
GCGCTCACGGCGTGCGAGCGTGCCAACAGCAACAACAGCGCCGACTGCGC
GCTTGACGTCTTCACGCGCATGCGCGCGCGCTTCGGCGGCGGCGGCAGCG
GCAGCGGCGGCGGCGGCGGCGCGAGGGGCGCAGACGCCGAGTGGACGAAG
CGCGGGCCTGCAGCATATGCGACCGCAATCAGGGCGTGTCAGAAGAATGG
GCGGTGGCGCGACGCGTGCGCGCTGCTGGGCGAGATGCGCGCTGAGCCGT
GGTGTACGAGCGACTACGACCAGTGCGACTACGACCAGTGGTACAGCGCG
CTGGCGCTGCTGGCGGGCGATGTGCCCGACCCCTCGCGGCCGGTGCCGAC
CCTGAAGACGTATCTGGCGGCCATGGCGGGCGCGGCTTCGGCGGGCCGCT
GGGAGGAGACCCTGACGCTCCTGGGCGGCATGGAGGTGCAGGGGCCGCAG
CAGCGCGGCAACACCCTGGCGCTTCTGGGCGGCATGGAGGTGCAGGGGCT
GCAGCCGGGCGCGGTCGGCTACGGCGCGGCGCTGGAGGCGCTCGCCACGG
CCGGCGAGCACGAGCGCGGCCTCGCGCTATTTGAGCAGACGCGCGGCAAA
GCCGGGTTCACACCGGATGTGCTGTGCTTCACCGCGGCGCTGAGCTGCTG
CCACGGCGTCGGCGACTGGCAGCGCGCCCTGGTGTACATGAGGGAGGCAA
CGGAGGCGAGACTGCTGCCGACGCGCCGCATGCGGCTGCTGGCGGCGCGC
ACGTGCCGCGCCGCGGAGCGCCACGACGAGCTGTGGGGGCTGTACGCAGA
CATGCAGATGGGCAGCAGCGGCGGCGGCGGCAGCAGCAGCGGCGGCGGCG
GCGGCGACGTGGCGTTCCTGACGGAGGTGCTGGAGGGCTGCGGCGCCGCG
CGCCGCGCGGACCGCGTCGTGGAGCTGCTCTACAAGCAGCAGAGCCTGTG
CGACGACCGCGCGCTTACGCTCGCCGCGCTGGAGGCGCTCGCCGCCGCAG
CCGCCGCCCCCGCCGCCGCCGACGCCATCCTGGCGCGCGCCGTCGCGCAC
GGCGCGCTGCGCGACCCGTGTCTGACCCTCCCCGCAGTCGATCTCGCAGG
GCTCGGGCCGGGCGCAGCGGCGGCGGTGGCTCGACATGCGGCGCGTGCCG
CCGCGGCGGCGGCGCCGCAGACGGGCGCGGGGTTGACGCTCGTCGGCGCG
CGCGGCGGCGGCGCAGCGCTGGCGGCGGCGGCGCAGGAGCTCGAGCGCCT
CGGGCTCGTGCCGCAGCTTGCGCGGCGGCGCGGCGGCGGCTCGAGCGCGC
ACGTCGCCGCGGCGGCGCTGGCGTCGTGGGCAGCGGCGGCGGCTGCGGCG
GAGGCCGCGGCAGAGGCAGAGCTGCCTGACACCAATGGCGCAACAGACGC
TGAGCGATAA
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protein sequence of jgi.p|Trimin1|351736

>Trimin1|351736|estExt_Genemark1.C_Ctg_990011 ID=Trimin1|351736|estExt_Genemark1.C_Ctg_990011|Name=jgi.p|Trimin1|351736|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=770bp
MSACSRAGNWQEALVLVSELRQRGMEPDLITGGQWCEALDVLDGLPAPLA
PNVHTFNAALAACAAARQWDPAMELFHAMARRGVVDVVSFNTAISVLARM
RQGQRAPADARTLAQLPPRRGGIGALGARRDAITPSPSLRGDAPQEMQAA
GIRPDAVTFGALALACERSAPPLHRRASGLLREMREAGVAPTNATFASVI
STVGSRHVRTGSQKCFVKREASVAPTTATFASVISTVGSLRVCCGAQKVL
IRREAGVASTIGTFASIISTVGRVGADQAITLLNHMEALGTPPNAICLQA
ALTACERANSNNSADCALDVFTRMRARFGGGGSGSGGGGGARGADAEWTK
RGPAAYATAIRACQKNGRWRDACALLGEMRAEPWCTSDYDQCDYDQWYSA
LALLAGDVPDPSRPVPTLKTYLAAMAGAASAGRWEETLTLLGGMEVQGPQ
QRGNTLALLGGMEVQGLQPGAVGYGAALEALATAGEHERGLALFEQTRGK
AGFTPDVLCFTAALSCCHGVGDWQRALVYMREATEARLLPTRRMRLLAAR
TCRAAERHDELWGLYADMQMGSSGGGGSSSGGGGGDVAFLTEVLEGCGAA
RRADRVVELLYKQQSLCDDRALTLAALEALAAAAAAPAAADAILARAVAH
GALRDPCLTLPAVDLAGLGPGAAAAVARHAARAAAAAAPQTGAGLTLVGA
RGGGAALAAAAQELERLGLVPQLARRRGGGSSAHVAAAALASWAAAAAAA
EAAAEAELPDTNGATDAER*
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mRNA from alignment at Contig_99:110571..122005-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12236 ID=mRNA_12236|Name=jgi.p|Trimin1|351736|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=11435bp|location=Sequence derived from alignment at Contig_99:110571..122005- (Tribonema minus UTEX_B_3156 )
ATGAGCGCATGCAGCAGGTGAGCTGAGTCACGACGTGTGAACAGCAGCTG CAGTAGTCAATCGCAATGGTGTATGAAGAGCACTGGGTATAATGAGTTGA AGTTGAAGCAACAGCGGCGATGCTGCGAGCGCATACAGCAGGTGGTGCGA GGCCTCAGAGGACCACATGTCAAGAGTGGCGCACTCAAAAAAAAGGGCCG GGGTGTCAAGGCGCGTACATCTACAAGTATAAGCTGCCTCAAGCTTCAAC ATCAAATCCAACTCTCAAGCTTTAACATGCAAGCTTGACATTGCACAAAA CTAGCACTTAGCTCTGCGGCGCTCACAGGCATGGGGAGTCGGCATGTCTG ATGTCAGGATCGTGTAAACTCTGAGAGTTCACGCAGAGTTCAGTATGGGT TCTCTGATGCACTGCACCTTATGGAGGCCCCTGGAGTCCTCCCGCGCCCC AAATCCATTTGGGCAAAAGAGTCTGCTTATTCAAGCATGGCGCCCGCTGC ACAGCGAGACATAAACTAATGCTGTTGACATTAAAAAACGCTGTTGTTCG GCCCAGGGTGAGGTGAACGCTGAGTGTTCAAGCCCTGAAATGCCTCATCG AGCCTGAAACCTTACATTGTCTGGGCTGTGCAGCACTGCACTGTGTCTCG CAAGCGACGCTCTCTATTTGCATTCGTAGGTTGTGCACCTGGCCCACCTT CGCTTGACGCGTGAGCGGTGCCGCCGCCACTCTGCAGGGCGGGCAACTGG CAGGAGGCGCTGGTGCTGGTGTCGGAGCTGCGGCAGAGGGGCATGGAGCC GGACCTCATCACGTACAACACAATCATAACGGCGCTGGGGAGGCGAGTCA CTTGAGAGTCACTCTTGCAGTGCCGCATGCCTTAGATAGCAGACGGAAAG AGGGCGGTATTTGCATCGTCAAATGCGCGTGAGAGTGCTGACAACGCCCC TCAAGCCAGTTTTGGGCCATTGTTGCCGCTGACATTGCTGCGACGGTGTG CCTTGATACATACACGCATGCCACGCCGGCGCCGCACTCCAAGCGTCTCT GCAGACTCGAACGCGCATGGGGGCACGTGCCTTCACTTGCCAATACCGCC GCTGCTGCCCCTTGTTGTGCTTGTGAAGGGCAGTGTGAGGTCAACAGGTT GAACTAAAGAATCAATGATGAGCTTGTGTTTGAACCACCTGTGAACCACA TGCATCTCCAACACCGGTCCGACAACAGTGCGCTCGGGGAGACAACGTCT GCTCCAAAGACTCGCAGCGCATGACGCTAGCGCTCACCGCCGCCGTTCGA TCGCGGCACGCGCGCGCGTGCTCGTGCATGGCCCGCTGCCATCGCGCACT GTGAGACTGTCTTCTGCGCGCGACTGCCGCCTTGTTGCTTCGCTTGAGAG TCCAGCCGTGCAGGGTTGGCCGGCGGTACGGTCGCCTGCACAGAGCCGTT CGCCGCCCGCCGCACACACGTAGTGGCCATGTGGCGCCTGCCTCATGCGT GCTTCATATTTGCCCGCTGCTGTCGCCCGCTGCCCGCCCCATCCGCTGCG CTGACGCATGACTCACGATCTGTTCCCACGTCGGTGTTTGGGCGGCAGTG CAACTGCGTACCGAAAGTCCCCGCTCTCTCGTGGTCACAGACACCATCGG GCCCCAGCACGCGCGTGCGTACCTCTCGCCTGCCTGCTGCCACCGCGCAC TGCCCTCAAGGCTGTCCTCGCGCCGCCTCCGCTGGTCCCTATCCATGCAG GGCGGGCAGCGGTGCGACTGCCTGCCCAGAGCCGCTAGGCGCCAGACGTG CACGCATAAATGCAACGTGGCGCTTGCCCCGCGAGCACTCCAGCACTCCC CGCTGCTGGTACGTGCTAACCCACCTGCATACACAATCTCTCTCATCGTC TCCGCTGCTGCTCTCCGCTCGCGCGCAGGGGCGGGCAGTGGTGCGAGGCG CTCGACGTCCTGGACGGCCTCCCCGCACCCCTCGCGCCCAACGTACACAC GTTCAACGCCGCGCTCGCCGCGTGCGCGGCCGCGCGCCAGTGGGACCCTG CGATGGAGCTGTTTCACGCCATGGCAAGGCGCGGCGTGGTTGATGTGGTA TCATTCAATACCGCCATAAGTGTGCTCGCGAGGATGCGCCAGGGGCAGCG CGCGGTGGCGCTCTTCGAGGCGAGTTGCTGGATGCCACATTGACTTCAAC AACGACATCAAGCCCAAACAACAATCACGTGCATGAAAAGTACAATTGGC GCATCAAGCATACGGGACCGCGTTGTCAGCGCGCAACCTCTGCGTGCCGC GCGTGCATTGCGGTGCTGGGCAACTTGGCAATCGGCGTGCGTGTGCGCAT GCACTAGGGGCAGCGTGCACGTGGCGCTCTTTGAGGCGAGTCGCTGGATG CTACATTGACTTCAACGAACATCAGTCCCCAGACAGCAATTCACACATAA ACGCACAGTCGAGGCAGCAGACACGCAGTGGCTATCAGCGTGCAGCCTCT GCGAACCGCGCATGCGTTGCGGTGCTGCTGTACCCCTGGCTCAGACCCTC AGCAGCCGAGGAAGGCGCGCCTGCTCGTTTGGGGCCTTGACGCCGCGGAG CCGTTGCACAGTTCGGTCTTTAAGCTATAGTGTACTCCAGAAACGAGAGT ATCATTCACGGTACCTGTGGTCTTCCAAGTCTCATATCGTGCATGTACAG TATGTTGGCTCCATTTCAGGTACTGCGTCAACGCCGCCATGTACTCCGAC CAGAAGCATCTGGGTCGGCAAGTGGCGACGACTGCGGCGGTGCATTGGGT TAGGGCTAGGGTTAGGGAGGTTACGATCACCTTCGGCCTCAAATGGCGCC TGCCGTTTGTTTCCGCAGGGAGAGTGTACGCTGCGGCATGCGGCTTGATG CGGAAGTGCTCAGCACGCCCACCCTCACGCCCTTCAACGCCGCTCACCCC CTGATCGCTGCATGCCGCTCTCTGCCCCCGTCTTGCACAGCTGAGTACAT GTTTACACCTATGTACATCTGTACATCTCCGTACAAATGTATGTATGTAT GTGAGCATGCAGCCCGCGGACGCTCGCACGCTGGCGCAGCTGCCCCCCCG CCGCGGGGGGATAGGCGCGTTGGGCGCCCGTCGCGACGCCATCACGCCCT CACCGTCCCTTCGCGGCGACGCGCCGCAGGTCCACGCGCCCCCCCTCTCA TGTCGCGGTACGCTGCATGCAGACGCCCTCCGCCAAGACAGCGCTCCATG AAGCGCGTGTTTGAAGTTCCCCGTTCCTGCCCCCCCCCCCCCTCCCCCCC CCCCCCACACACACACACGCGCGCGCTACAGGAGATGCAAGCGGCGGGCA TCCGGCCGGACGCCGTCACGTTTGGCGCGCTCGCGCTCGCCTGCGAGCGC AGCGCGCCACCGCTGCACCGCCGCGCCTCCGGCCTGCTGCGCGAGATGCG CGAGGCGGGCGTCGCGCCCACTAACGCGACGTTCGCCAGCGTGATATCCA CAGTCGGCAGGTGCGCAGTTGCTACCGTAAGGCACTCAGTGGTTGTATGC GTCGAACCATCATTGTGACGTGCGCCGGCGCGATCGACGCAGTCGGCACG TGCGTACTGGCAGCCAGAAGTGCTTTGTTAAGCGCGAGGCAAGCGTCGCG CCCACCACCGCGACGTTCGCCAGCGTCATATCCACGGTTGGCAGGTGCGT AAATGCTGCTACTATTTGGGTAGTTGCGAATTGCGCTTGTGCGCCCGCGC ATTTTGTGCCAGCTTGATCCGCGTCCGCAGTTTGCGGGTGTGTTGTGGCG CTCAGAAAGTGCTCATTAGGCGCGAGGCGGGCGTCGCGTCTACGATTGGG ACGTTCGCCAGCATCATATCCACGGTCGGCAGGTGCGCAGGCGCATCAGC TCCCATCGACTCCGCAGCGCATCGCCCCCTCATCCACTCTCTTTGCACGC GTTGCGCAGTTCTGGGCGTACTCATCAACGGTAGTCACTAGTAGTTTTAC CATGCTTCAGTGCGCTGGTTTCTGTCATGACCATGTTGCGCATCTGAGGT GTGTGGCAGTTGAAGTTCATACAGCAGGAACGTCACAGGCTTAGTTGATG TTGCTTGCGCTTGCTGCGCAGGGTCGGCGCTGACCAGGCCATCACGCTGC TGAACCACATGGAGGTGAGCTTCCCTCAGCCCTAACTCTAATCCCAACCC TCACCCTATTCACTTCCGGCAAGCGCTGTTTGCTCAATGGTCGCAATGTG CTAATGCACACCGTTGTTGTTGCAAACCTCGACGCTGCAAGCCAAGTCGA TTATTAGACCAGATCCATGCCCATGTACAGCTCAAAGAAAGCCTTCAACG AGTTGCTGAGCCACGTGGAGGTGAGCTACCCTGCCGCTCTGACTTCTGGG AAGCATTGACCGCTCGGTAGCCGTTGACATTGTGAGCACCGTGACTGTAG TTATCAATAGTATTGATGCTGCGAACTATGACGGTTACCAGACCAGACTC ATTGCCATGTACAGCTCAAAATAAGCGTCCTTCCGCTGTGCATCCGAGGT GTGCCCGCAATGACGGCTTCCCACTGTGCTTTTTATTAATTCTCGCTCAG GGCGCGAAAAAGCCCAGATGAATGGCATCTAACTTGAAGCTTGCTGTACG GAATCCACATGTCGTGTGACAGTCTGAAAGTGTCTCAACGGCAACACTCA AACGCCGCCGCCGCCAAATGTCAACTGTACTTCTAGTTCGAAGTATCAAT TTCGCTTGGGGCGCGACAAGTCCTCTCTCCATGGATTGCATGTGCACTGG ATGCAATACTGTGCTTTTGAACTGTGCTTTTGTTTGTTACTTTAGTCTGC AGCAAATCGTGATGCTGGACACCGACGCATCATCACCCAGCCGGCGCACC AGTCTGCAACGCCCGTGCCACTCAAGGCATTCATCGCAGTCACGACAGGG CTCGCTATTGGGACGCCGCGTTGCCACGCATGACAACCACTACAGCGCTC CGCTATCGTCGCACACACATCAAGCGCGCACAACAGCGCCACTGCACCCT CCACTTTAGTGCTCTGCTGCAGTCAAATACATCAAGCGTGCGCGTGAACG CCCATCGCCGCTGCGCGCGCTCGCACGCACACGTATGACTTACCGCAAGC ACGCGCACGCACGCAGGCCCTGGGGACTCCGCCGAACGCCATCTGCCTGC AGGCGGCGCTCACGGCGTGCGAGCGTGCCAACAGCAACAACAGCGCCGAC TGCGCGCTTGACGTCTTCACGCGCATGCGCGCGCGCTTCGGCGGCGGCGG CAGCGGCAGCGGCGGCGGCGGCGGCGCGAGGGGCGCAGACGCCGAGTGGA CGAAGCGCGGGCCTGCAGCATATGCGACCGCAATCAGGGCGTGTCAGAAG AATGTGAGTGTTGGGCCTCAAATCTTGCCTCGACTGTGAGTTCAGCCCCA AGAAGAGATGCGATGTCATGCCAGCCTTGGTGTGCAAACCTGTCAGATGA GGAGAGTAAGTGAGATCGCACGGCAGCTCACGGTGGGCATCCATGCTACC TCCAACCTGATAGCTGACCGTAAGCCCAAGCGGGTGCGGTTTGAACCAAG CGGTGCCGCCTCATCGCGCACCGCGTGAGATGCCGTCGCTGCCGCACAAA CGCGGCAGCACGGCAGGCCCGCAGCCTCGATGCTGCCTGTGACGTGCGCT TGAGCCGCAGGCGTGTGGCTGCGCCGAGCGGCGCGTGCGCTGCCGTCAGC ATGGCAGAACACCAGGGACGGCAGCGCCTCGACCAGAAGCTGGAATGGAT GCACACAGTGGTCTGTGGGTTGGCAGCATGGAGGCTTTCAATGTGGTGGT GCGGGTTCTGCAGCGTCTGCGCAAGTGCAGGGTCCGCAACTGGCGCGATA TGACAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGAGTGAGTCTGGG GGGACAGCCGCGCTGTGCGTTTTGGTGGGGGGTGTCAAGTGCAAAGTGCC GCCAATCTGCTCCTCACTTTGAGCGTGTGCTTGGCTGGTGGCGCCCTCAT CTCCACGCGATCATCGAGTGCAGTTGTCGCGCGGTCTGATGTTGCCAATG TTGAGCGCTGCTGCCGAGCCGCTCCTCACGAACCGATCCACACCATGCGG AGGAACGCGCGGACAAAAGCTGCCTCACTTGTACGGTGAAGTGCGCGCGG TATCTTCGCCTCGCGATCGTGCATGCCTCTGGCATGAATTCTCGTGCCGT TTAGGGCTGCCGCGCGTCAGTGCTCCGCAGGACCGGTACCTACATACACA TTGAAGTCCGTTTCACTCGTAGGGAAAACTGCCCGGGCCGTTTGCCATTG ACGGCGTTGCGCGCCTCGGCTCAATCACTCGTGCCGTCTGTCCGTGTCGC GCGCGCGACTTGTGATATCGATTTTGACATGCTGGACTCACTTCACAGGT GAAGTTGGCGTCTGACAAGTGAACTTGGTGTTCGAACGTGCGCTGCAGGG GCGGTGGCGCGACGCGTGCGCGCTGCTGGGCGAGATGCGCGCTGAGCCGT GGTGTACGAGGTGAGGCTTTGTCTCGTTCTGACGCTATTGCGTCAGGCTT CGTAAGTGATGTGCGTCGTACGTGGTAAAAGACGACTGTGAGGCCCAACG GCCCACTGCTTGTCCAGCACTGTCACGATAGACCTCATATGTGATGCGCA TTGTTGTAAGTGCACGTGCTCGAAAGCGACATCGACATGCTGTCGTGTTG CGCGAGCGGTTTGCGGCGCGGCGCCGCCGTGCTCTCTGTAACCCTAACCG TTACCCTGAGCGCGACTGGGGTGGGCGGCTACGGAGATGCGCACGGAGCC GTGGTGCACAAGTTGAGGCTCACCGCTTGTCGAAATGTCATTGCGGCAAG CTTCATATGTGATGTGCGTCGTTCTATGTGCACAGAAGCTACCATTGTAA GTCAGCTTGATAGTCAGCTTAACATCGCCCTGCAGGTCTTCGGGCCTGCG GCCCACCAATAGTGCTGGAAAGTGACGCCGGCGTGGTGTGGTCGCGGCGT GGTGTGGTCGGTGCGCTGTCACTTGTGTCGTTCGGCGCGAGCGGTCTGCG GCGCGGCGCTGTCGTGCTCCCCATAACTACTCCTAACCCTGATCCTATCC CTAAGTGCGAGCAACGATTACGGACAGCAGCTATGGGTAGCGGCACAGCG CAGTGACTGTGGCAAAGCGCGGTTCTTCACGCTCGCGTGCGCTCAAGCAA CGTCAATGCGAACTGCTTGCTGCGTACTTCACATGTCGTGCTCTTCGTCC GCGCGCGCGTGCATTGATTACAACCAGCGGTACCGCACGCAAGCGCTGCT AACCACAGCAGCAGACCTTAAGTACTACTCTTCCACCTTGAAGCAAATTG CGACATAACGCGCATGGTGGATTGTGAGTTGCTGTCGCCGTACTTTCCGC GCGCGCGCGTGCAGCGACTATGAACAGTGGTAACATTGCGCGGCGCTGCT GGTGCAGCACCTGTCGGTTGCAATAAAATGAGACGTCCCATGCTCACCAT GCACCTCAGCTACACGAACTCCTGGCTGTATAGGTCACATGTCGTGCTCT CCGTCTGCGCGCGCGTGCACCGACTACGACTAGAGGTCCCGCGCGCTGAC GCTGCCAGCGGGACCCCAAGAATTCGCTTCAGCAGCCTGATTTCTCCGCT CTGAAACGACATGTAATGTGATGCAGCTATTGGCTTGTGACTTGCTAATG CTGTACTCTTTAATGCTTTTCCATCCGCACGCGCGCAGCGACTACGACCA GTGGTACATCGCGCTGATGCTACCGCCACAGCGGGCTGATCTTCCGCTCG AAGGCGACATATACGTGGCGCAATTGCTTGTTTGTGACTTGGCGTCGCTG TGCTTTCCGTGCGCGCGTGCGCAGCGACTACGACCAGTGGTACAGCGCGC TGGCGCTGCTGGCGGGCGATGTGCCCGACCCCTCGCGGCCGGTGCCGACC CTGAAGACGTATCTGGCGGCCATGGCGGGCGCGGCTTCGGCGGGCCGCTG GGAGGAGGTGACTCACCCACTATCATGAGACTTCAAGTTGAAGTGAATGG TTGTTTTGGTAGTGAACGCTTGCTAGCCACCATGATAGAGCGAGTGGCAT CCGCACCGATCAGCAATGAGACTTCAACTAGTTGTTGTTGTGGTGTATGG TTGCTCACCACGTAAAGTGGAATGGCGGGCGCGGCTGCGGCGAGTTGTTG GGAGGAGGTGACTCGCCCATTGATGAGAATGTATCCTTCCAGTTGAAGTG GCTAGTTGAAGTAGCAGTGACCGTCAGTCGCCACCATGCTAGATTGAAAC GCCGCTGGGCAGAGGTGAGTTGAATGATTAGTTGAGGTAGGCTGAATGAT GAGTTCAACTTGCAGTGGCTACCTCTTGTAGCAGGTGGCGTTGTTTACTC GGCAGCATGGTCCCTCTGGTGCGCCCAGAAAGGCATCATCACACAGCTCA TCTCCTTCTGGACTTCGTTCACAGCTGCCGATGCCCCGCAACCTCATAGT GCCACTTCCGCTCATTGCCCTTTATGCTCCTGCCAGACCCTGACGCTCCT GGGCGGCATGGAGGTGCAGGGGCCGCAGCAGCGCGGCAACGTCGGGCAAC GGCTGGAATCGTGCCAATCCCCCTCAGTGCCGCAGCCCCTTTATTGCGGT AGCACCCACGCTCTGAACTTAGCAGATAAACAAGAAAGGATGCCCCGCAA CCTCACACCTCCACCCCCGCTCGTCGCTCCCCTTTGCTGCCCTTTATGGC GCCTGCCAGACCCTGGCGCTTCTGGGCGGCATGGAGGTGCAGGGGCTGCA GCCGGGCGCGGTCGGCTACGGCGCGGCGCTGGAGGCGCTCGCCACGGCCG GCGAGCACGAGCGCGGCCTCGCGCTATTTGAGCAGACGCGCGGCAAAGCC GGTGAGCCTTCCTTTGCGTGCGCGACACCGTGTCATTGCTTAAAGTGTTC GCCCGCACAAAGTTTGAAGAATTTGCAGGCATTTCCTTGCGCTCAAACAG TGCTTCAAGCGTTAGCGCGGCCTTGCACTGTTTGAGCAGACGCGCGGCAA AGCTGGTGAGCCGTTCTCCTCTTGTGGGACACCGTGTCATTGCTTAAGGC GTTAGCCCGCACAGAACTTGAACGTGCAGGCTTCTCTTTGAGCCTTGAGC AGTGCGCTTTGAGCAGGCGCGCGGCAATGCCGGTGAGCCGCATCCACGTA GCGGCGCCATTTCTCTTTTGCGGGCACCACCGTGCGCTATATTTCTCATG TGCCGTGGCATGGTCAGTCATGCTAGTCCGCGCGCTCCAAGCGGTGTGCT CGCGCGGTGTCCGCTCAAGCCCTCAGTGCTGCGCTCTGAGCAAATGCGTG GCAGAGCCGGCGCGCCACTTGCGACGCGGCGATTGCCAACCGTGGCGAGA GGCAGGGCTCTTGGCATCGCGCAAACGCTGATGCGCACGCAATCATCATC GCTGCGTGCCTAAGCGACGGTGCGTGCGGAGCCTGCGCGCATTGTCATCG ATGTGTTCTTGAGATGTTCTGTGGCACCTTCACGCAGCTGCTGCATTGAC GGCAGCTGCTGGCAGGGGGCGTTGTCACGTACACCCAATTCATGAGCACA TGTGTGCAACCTTTGCGGCAGCTATCTTTGTGAGATGCACCAATTTCAGA TGTGTACGTGTGCGCAAGCAGCTGCTTACAGTGCGCTTGTGTATCATCAA TGCGGCGTGCAGGGTTCACACCGGATGTGCTGTGCTTCACCGCGGCGCTG AGCTGCTGCCACGGCGTCGGCGACTGGCAGCGCGCCCTGGTGTACATGGT ACGTGTAACCGCAAGAAGTTGAAGTGTTTGTCATCCCTGGAACAAGCGGC AAGTATTCGCTGTTGCTTGCAGCTGTTGTGTTTGCTGCACGACCTCCATC GACATTGCCGCTTCGCAGCATTGTTGCGCCTCGCTTGTGCACATGATTGA CTTCATGTAGCAGGCGCGTTCATGCGCTCACGGCGGCGCCGCCGTGATTC GTGCGTCATACTTAGTTGTATTTGTGCAGCACGTGTGCCTCAGCGTGCGG GCGCATGCGCTTTGACCCGACTCAGCACCGCCGCCCGCGCACACGCCTTC TTTCTCCCTCTACGCACAACACAGTGAGGGATAACAACAGCGGGGCTACC GCCGATGCGCTGCGTGCGCTCGCTTGCCCACGCGCGCATGCCTCTGCACC GCGCACCGCATCTGACGCCTAGGGGCTCATCCTGCCAACCTCAACCTCAA CTTCAACCTCTCTGCAGAGGGAGGCAACGGAGGCGAGACTGCTGCCGACG CGCCGCATGCGGCTGCTGGCGGCGCGCACGTGCCGCGCCGCGGAGCGCCA CGACGAGCTGTGGGGGCTGTACGCAGACATGCAGATGGGCAGCAGCGGCG GCGGCGGCAGCAGCAGCGGCGGCGGCGGCGGCGACGTGGCGTTCCTGACG GAGGTGCTGGAGGGCTGCGGCGCCGCGCGCCGCGCGGACCGCGTCGTGGT GCGTCGAGCACTGCTGCTGTGATTTATGATGTCTCGTGCGGGGGGATGAC GCGCATGCCGGGCCGCCGGGCTGCTGCGTTTGCGGCGTAGTTGCAGTCCT GGCTGGCAATGCGACGCCGTAGTGCCCCTATATTGCGGGGTATCTTGCGC TGCGGTGCTGCTGATGCTGCGGCGCAGAATGCCCGTGCAGCGCTCCTGCC GCCGCTGCACTGTCGCTGTATGAGCACCGCGCGTTTCTCGTCCCCACCCT GTCCCGTGCAGTACGGCAGCCGTGTTGTTGCTGATGCGCTGAACCGTCAC CGCCTGTTGCCCCTGTCAGCATCACTTTGACGCTTCTGGGACCCCCCCCC CCCTTCACACACGCCCCCCCCCGCCCCCCACGCGCCACGACCGCAGGAGC TGCTCTACAAGCAGCAGAGCCTGTGCGACGACCGCGCGCTTACGCTCGCC GCGCTGGAGGCGCTCGCCGCCGCAGCCGCCGCCCCCGCCGCCGCCGACGC CATCCTGGCGCGCGCCGTCGCGCACGGCGCGCTGCGCGACCCGTGTCTGA CCCTCCCCGCAGTCGATCTCGCAGGGCTCGGGCCGGGCGCAGCGGCGGCG GTGGCTCGACATGCGGCGCGTGCCGCCGCGGCGGCGGCGCCGCAGACGGG CGCGGGGTTGACGCTCGTCGGCGCGCGCGGCGGCGGCGCAGCGCTGGCGG CGGCGGCGCAGGAGCTCGAGCGCCTCGGGCTCGTGCCGCAGCTTGCGCGG CGGCGCGGCGGCGGCTCGAGCGCGCACGTCGCCGCGGCGGCGCTGGCGTC GTGGGCAGCGGCGGCGGCTGCGGCGGAGGCCGCGGCAGAGGCAGAGCTGC CTGACACCAATGGCGCAACAGACGCTGAGCGATAA
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Coding sequence (CDS) from alignment at Contig_99:110571..122005-

>mRNA_12236 ID=mRNA_12236|Name=jgi.p|Trimin1|351736|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2310bp|location=Sequence derived from alignment at Contig_99:110571..122005- (Tribonema minus UTEX_B_3156 )
ATGAGCGCATGCAGCAGGGCGGGCAACTGGCAGGAGGCGCTGGTGCTGGT
GTCGGAGCTGCGGCAGAGGGGCATGGAGCCGGACCTCATCACGGGCGGGC
AGTGGTGCGAGGCGCTCGACGTCCTGGACGGCCTCCCCGCACCCCTCGCG
CCCAACGTACACACGTTCAACGCCGCGCTCGCCGCGTGCGCGGCCGCGCG
CCAGTGGGACCCTGCGATGGAGCTGTTTCACGCCATGGCAAGGCGCGGCG
TGGTTGATGTGGTATCATTCAATACCGCCATAAGTGTGCTCGCGAGGATG
CGCCAGGGGCAGCGCGCGCCCGCGGACGCTCGCACGCTGGCGCAGCTGCC
CCCCCGCCGCGGGGGGATAGGCGCGTTGGGCGCCCGTCGCGACGCCATCA
CGCCCTCACCGTCCCTTCGCGGCGACGCGCCGCAGGAGATGCAAGCGGCG
GGCATCCGGCCGGACGCCGTCACGTTTGGCGCGCTCGCGCTCGCCTGCGA
GCGCAGCGCGCCACCGCTGCACCGCCGCGCCTCCGGCCTGCTGCGCGAGA
TGCGCGAGGCGGGCGTCGCGCCCACTAACGCGACGTTCGCCAGCGTGATA
TCCACAGTCGGCAGTCGGCACGTGCGTACTGGCAGCCAGAAGTGCTTTGT
TAAGCGCGAGGCAAGCGTCGCGCCCACCACCGCGACGTTCGCCAGCGTCA
TATCCACGGTTGGCAGTTTGCGGGTGTGTTGTGGCGCTCAGAAAGTGCTC
ATTAGGCGCGAGGCGGGCGTCGCGTCTACGATTGGGACGTTCGCCAGCAT
CATATCCACGGTCGGCAGGGTCGGCGCTGACCAGGCCATCACGCTGCTGA
ACCACATGGAGGCCCTGGGGACTCCGCCGAACGCCATCTGCCTGCAGGCG
GCGCTCACGGCGTGCGAGCGTGCCAACAGCAACAACAGCGCCGACTGCGC
GCTTGACGTCTTCACGCGCATGCGCGCGCGCTTCGGCGGCGGCGGCAGCG
GCAGCGGCGGCGGCGGCGGCGCGAGGGGCGCAGACGCCGAGTGGACGAAG
CGCGGGCCTGCAGCATATGCGACCGCAATCAGGGCGTGTCAGAAGAATGG
GCGGTGGCGCGACGCGTGCGCGCTGCTGGGCGAGATGCGCGCTGAGCCGT
GGTGTACGAGCGACTACGACCAGTGCGACTACGACCAGTGGTACAGCGCG
CTGGCGCTGCTGGCGGGCGATGTGCCCGACCCCTCGCGGCCGGTGCCGAC
CCTGAAGACGTATCTGGCGGCCATGGCGGGCGCGGCTTCGGCGGGCCGCT
GGGAGGAGACCCTGACGCTCCTGGGCGGCATGGAGGTGCAGGGGCCGCAG
CAGCGCGGCAACACCCTGGCGCTTCTGGGCGGCATGGAGGTGCAGGGGCT
GCAGCCGGGCGCGGTCGGCTACGGCGCGGCGCTGGAGGCGCTCGCCACGG
CCGGCGAGCACGAGCGCGGCCTCGCGCTATTTGAGCAGACGCGCGGCAAA
GCCGGGTTCACACCGGATGTGCTGTGCTTCACCGCGGCGCTGAGCTGCTG
CCACGGCGTCGGCGACTGGCAGCGCGCCCTGGTGTACATGAGGGAGGCAA
CGGAGGCGAGACTGCTGCCGACGCGCCGCATGCGGCTGCTGGCGGCGCGC
ACGTGCCGCGCCGCGGAGCGCCACGACGAGCTGTGGGGGCTGTACGCAGA
CATGCAGATGGGCAGCAGCGGCGGCGGCGGCAGCAGCAGCGGCGGCGGCG
GCGGCGACGTGGCGTTCCTGACGGAGGTGCTGGAGGGCTGCGGCGCCGCG
CGCCGCGCGGACCGCGTCGTGGAGCTGCTCTACAAGCAGCAGAGCCTGTG
CGACGACCGCGCGCTTACGCTCGCCGCGCTGGAGGCGCTCGCCGCCGCAG
CCGCCGCCCCCGCCGCCGCCGACGCCATCCTGGCGCGCGCCGTCGCGCAC
GGCGCGCTGCGCGACCCGTGTCTGACCCTCCCCGCAGTCGATCTCGCAGG
GCTCGGGCCGGGCGCAGCGGCGGCGGTGGCTCGACATGCGGCGCGTGCCG
CCGCGGCGGCGGCGCCGCAGACGGGCGCGGGGTTGACGCTCGTCGGCGCG
CGCGGCGGCGGCGCAGCGCTGGCGGCGGCGGCGCAGGAGCTCGAGCGCCT
CGGGCTCGTGCCGCAGCTTGCGCGGCGGCGCGGCGGCGGCTCGAGCGCGC
ACGTCGCCGCGGCGGCGCTGGCGTCGTGGGCAGCGGCGGCGGCTGCGGCG
GAGGCCGCGGCAGAGGCAGAGCTGCCTGACACCAATGGCGCAACAGACGC
TGAGCGATAA
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