Trimin1|339673|MIX48436_57_40 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|339673
Unique NameTrimin1|339673|MIX48436_57_40
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length546
Homology
BLAST of jgi.p|Trimin1|339673 vs. uniprot
Match: A0A836C824_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C824_9STRA)

HSP 1 Score: 1145 bits (2961), Expect = 0.000e+0
Identity = 545/545 (100.00%), Postives = 545/545 (100.00%), Query Frame = 0
Query:    1 MSNRRLADDGKRSILVRLCRSDDSKCGCRTRMRRCHDRVFISAAATDCRESIVCVALSSKDKYGEKYSDTVFANGWHDLPDGGQAVMDRMLGAIVYQRTFHVSFTGISNTAGHDNMKEQAYPWHFETILAPVFARAGVDFTASNGAIGNNDILPYSYCMEAHAGAHPDIVSWEMGMQIEGVECFPKSEYLEYWIRNVIALPSQPIPVVLEAVSKRRWCPGNRELSYSNYDFNQMFGRCWGDRPTDEQRRKDQMDYYKDFGIHALHLDDLLSHTTCGDDLFDEEHLYGNKDAEYVTSLAATLNLPAEPARRHPVPMPNFCISEQCVKAGSYNCLTSYYPNLEDSLQLKAHITQSAFNATERTQYLPDVPEEWQIVVNERATDIGEFHFNNASWPVDRKWVLAGDKRAGALNIAFTTQGVHENALGHAGATEPIMLCRQLSPQHTHEEDAAQSLGSVATMWFMVDGQPSPPCTAAACLIFELLPRVSSRLRRTQPSGASRGPPDRGIHSVCWTLDVRVGNGDHLLTIVPLKEGPENLVRISHVIVPK 545
            MSNRRLADDGKRSILVRLCRSDDSKCGCRTRMRRCHDRVFISAAATDCRESIVCVALSSKDKYGEKYSDTVFANGWHDLPDGGQAVMDRMLGAIVYQRTFHVSFTGISNTAGHDNMKEQAYPWHFETILAPVFARAGVDFTASNGAIGNNDILPYSYCMEAHAGAHPDIVSWEMGMQIEGVECFPKSEYLEYWIRNVIALPSQPIPVVLEAVSKRRWCPGNRELSYSNYDFNQMFGRCWGDRPTDEQRRKDQMDYYKDFGIHALHLDDLLSHTTCGDDLFDEEHLYGNKDAEYVTSLAATLNLPAEPARRHPVPMPNFCISEQCVKAGSYNCLTSYYPNLEDSLQLKAHITQSAFNATERTQYLPDVPEEWQIVVNERATDIGEFHFNNASWPVDRKWVLAGDKRAGALNIAFTTQGVHENALGHAGATEPIMLCRQLSPQHTHEEDAAQSLGSVATMWFMVDGQPSPPCTAAACLIFELLPRVSSRLRRTQPSGASRGPPDRGIHSVCWTLDVRVGNGDHLLTIVPLKEGPENLVRISHVIVPK
Sbjct:    1 MSNRRLADDGKRSILVRLCRSDDSKCGCRTRMRRCHDRVFISAAATDCRESIVCVALSSKDKYGEKYSDTVFANGWHDLPDGGQAVMDRMLGAIVYQRTFHVSFTGISNTAGHDNMKEQAYPWHFETILAPVFARAGVDFTASNGAIGNNDILPYSYCMEAHAGAHPDIVSWEMGMQIEGVECFPKSEYLEYWIRNVIALPSQPIPVVLEAVSKRRWCPGNRELSYSNYDFNQMFGRCWGDRPTDEQRRKDQMDYYKDFGIHALHLDDLLSHTTCGDDLFDEEHLYGNKDAEYVTSLAATLNLPAEPARRHPVPMPNFCISEQCVKAGSYNCLTSYYPNLEDSLQLKAHITQSAFNATERTQYLPDVPEEWQIVVNERATDIGEFHFNNASWPVDRKWVLAGDKRAGALNIAFTTQGVHENALGHAGATEPIMLCRQLSPQHTHEEDAAQSLGSVATMWFMVDGQPSPPCTAAACLIFELLPRVSSRLRRTQPSGASRGPPDRGIHSVCWTLDVRVGNGDHLLTIVPLKEGPENLVRISHVIVPK 545          
BLAST of jgi.p|Trimin1|339673 vs. uniprot
Match: A0A835YN73_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN73_9STRA)

HSP 1 Score: 317 bits (813), Expect = 2.390e-99
Identity = 183/448 (40.85%), Postives = 242/448 (54.02%), Query Frame = 0
Query:   71 VFANGWHDLPDGGQAVMDRMLGAIVYQRTFHVSFTGISNTAGHDNMKEQAYPWHFETILAPVFARAGVDFTASNGAIGNNDILPYSYCMEAHAGAHPDIVSWEMGMQIEGVECFPKSEYLEYWIRNVIALPSQPIPVVLEAVSKRRWCPGNRELSYS-NYDFNQMFGRCWGDRPTDEQRRKDQMDYYKDFGIHALHLDDLLSHTTCGDDLFDEEHLYGNK-----------------------DAEYVTSLAATLN-------------LPAEPARR-----HPVPM------PNFCISEQ----CVKAGSYNCLTSYYPNLEDSLQLKAHITQSA-FNATERTQYLPDVPEEWQIVVNERATDIGEFHFNNASWPVDRKWVLAGDKRAGALNIAFTTQGVHENALGHAGATEPIMLCRQLSPQHTHEEDAAQSLGSVATMWFMVDGQ 465
            +F N W+DLPDGG AV  R+L A+V QR F ++FTGISNTAGHDN+  Q+YP   E +L PV   AGV+    NGA+GN D LPYSYC+EAHAGAHPD+VSWEM MQI    C   +E +E WIR  +ALPS+P+P++L   + R  C  +RE   + ++   +  GRC G   T    + D M +YKD+GIH+L+L+ L++  TCG   F+++ LYG K                        A Y+  L   L+             L A   R      H VP       P  C   +    C ++GSY CLT+YYPN + S QL  ++T +   N     +YLP    EWQ++VNE    I  F F+N  WPVDRKWVLAG   AG LN  F    +       AG   P+++CRQ+ PQ T  E  AQ   ++  M   +DGQ
Sbjct:    1 LFHNAWYDLPDGGAAVKQRLLRAVVGQRNFTMAFTGISNTAGHDNLFAQSYPMVLERLLKPVLQLAGVELRVLNGAMGNTDFLPYSYCVEAHAGAHPDVVSWEMSMQIGNTPCTRTAELVETWIRTALALPSRPVPLLLNCQADRGRCARDREAPPTLSHTMEKAVGRCVGAERTRGTLQHDLMSWYKDYGIHSLNLETLMAAHTCGYPAFEKKRLYGGKVGTPRTKSWHPGPGAHRLMAEVLAANYLGLLRGALSELDAAAPGVTLQELQARERRLRQCAVHLVPQLWQSHAP--CCHRRFVLLCARSGSYRCLTTYYPNQDASTQLDRYVTDNTTLNRKPHFKYLPTNTSEWQVIVNEPMRGITGFQFDNPQWPVDRKWVLAGAASAGPLNFKFEVTELP------AGRMAPVVVCRQVPPQQTPSEIHAQPPYTLDNMVLSLDGQ 440          
BLAST of jgi.p|Trimin1|339673 vs. uniprot
Match: A0A835YRS9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRS9_9STRA)

HSP 1 Score: 267 bits (682), Expect = 3.290e-78
Identity = 145/358 (40.50%), Postives = 199/358 (55.59%), Query Frame = 0
Query:   58 SSKDKYGEKYSDTVFANGWHDLPDGGQAVMDRMLGAIVYQRTFHVSFTGISNTAGHDNMKEQAYPWHFETILAPVFARAGVDFTASNGAIGNNDILPYSYCMEAHAGAHPDIVSWEMGMQIEGVECFPKSEYLEYWIRNVIALPSQPIPVVLEAVSKRRWCPGNRELSYSNYDFNQMFGRCWGDRPTDEQRRKDQMDYYKDFGIHALHLDDLLSHTTCGDDLFDEEHLYGNK-------------------------------DAEYVTSLAATLNLPAEPARRHP-VPMPNFCISEQCVKAGSYNCLTSYYPNLEDSLQLKAHITQSAFNATERTQYLPDVPE----EWQIVVNERA 379
            S K KYG +    +F + W+DLPDGG+AV  R+L AIV+QR F ++FTGISNTAGHDN   ++YP   E +  PV   AGV+F   NGA+GN D LPYSYC+EAHAGAHPD+VSWEMGM++    C   +  +E WIR V++LPS+P+P++L   + R  C        ++  F ++ GRC G   ++         +Y+++G+H L+L+ LL+   CG+ LF +E LYG K                               D  Y   LA  L L    A   P +P  ++C  E C  AG++ CLTSYYPN ED  QL  H+  S F+ T + Q   + P+    EW I + ERA
Sbjct:    3 SLKKKYGWQMKP-LFKDAWYDLPDGGRAVKQRLLHAIVHQRNFTMAFTGISNTAGHDNRITESYPMVLEQLFKPVLQLAGVNFHVLNGAMGNTDFLPYSYCVEAHAGAHPDVVSWEMGMEVGNRSCRQTAMAVEAWIRAVLSLPSRPVPLLLNCQADRGGCARGSNAPSAHRVFERVVGRCEGKEHSEYTEEHQLTQWYREYGLHGLNLEFLLAKHACGNPLFAKERLYGGKMGTPRTKSWHPGPPGHLLMAEVLMANYIGLLDVAYREELAKALGLQPYGASGPPRLPEASYCFQEHCTNAGAFTCLTSYYPNWEDHTQLTPHVVDSRFDPTPKFQVGLEKPDAAAAEW-IKMTERA 358          
BLAST of jgi.p|Trimin1|339673 vs. uniprot
Match: A0A836CGX8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGX8_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.040e-34
Identity = 58/91 (63.74%), Postives = 76/91 (83.52%), Query Frame = 0
Query:   79 LPDGGQAVMDRMLGAIVYQRTFHVSFTGISNTAGHDNMKEQAYPWHFETILAPVFARAGVDFTASNGAIGNNDILPYSYCMEAHAGAHPDI 169
            +PD G A++DRMLGAIVYQR+F V+FTG S TAGHDN++ Q+YP  FE+I+AP+F  +GV+FTA+N A+GNNDI+PY +C+EAH G  PDI
Sbjct:    1 MPDDGAAIIDRMLGAIVYQRSFRVAFTGTSVTAGHDNLESQSYPMQFESIMAPIFEHSGVNFTATNSAMGNNDIVPYLWCLEAHVGIDPDI 91          
BLAST of jgi.p|Trimin1|339673 vs. uniprot
Match: A0A836CG01_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG01_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.120e-8
Identity = 37/60 (61.67%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    1 MSNRRLADDGKRSILVRLCRSDDSKCGCRTRMRRCHDRVFISAAATDCRESIVCVALSSK 60
            M NRR ADDGK + LVR CR+   K G  TRMR+CHDR F SA ATD R+S+V VA SS+
Sbjct:    1 MRNRRRADDGKCTFLVRRCRAXXXKWG--TRMRQCHDRDFTSAVATDRRDSVVYVAPSSQ 58          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|339673 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A836C824_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YN73_9STRA2.390e-9940.85Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YRS9_9STRA3.290e-7840.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CGX8_9STRA1.040e-3463.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CG01_9STRA1.120e-861.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_98contigContig_98:151239..161228 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|339673mRNA_14894Tribonema minus UTEX_B_3156 mRNAContig_98 151239..162002 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|339673|MIX48436_57_40 ID=Trimin1|339673|MIX48436_57_40|Name=jgi.p|Trimin1|339673|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=546bp
MSNRRLADDGKRSILVRLCRSDDSKCGCRTRMRRCHDRVFISAAATDCRE
SIVCVALSSKDKYGEKYSDTVFANGWHDLPDGGQAVMDRMLGAIVYQRTF
HVSFTGISNTAGHDNMKEQAYPWHFETILAPVFARAGVDFTASNGAIGNN
DILPYSYCMEAHAGAHPDIVSWEMGMQIEGVECFPKSEYLEYWIRNVIAL
PSQPIPVVLEAVSKRRWCPGNRELSYSNYDFNQMFGRCWGDRPTDEQRRK
DQMDYYKDFGIHALHLDDLLSHTTCGDDLFDEEHLYGNKDAEYVTSLAAT
LNLPAEPARRHPVPMPNFCISEQCVKAGSYNCLTSYYPNLEDSLQLKAHI
TQSAFNATERTQYLPDVPEEWQIVVNERATDIGEFHFNNASWPVDRKWVL
AGDKRAGALNIAFTTQGVHENALGHAGATEPIMLCRQLSPQHTHEEDAAQ
SLGSVATMWFMVDGQPSPPCTAAACLIFELLPRVSSRLRRTQPSGASRGP
PDRGIHSVCWTLDVRVGNGDHLLTIVPLKEGPENLVRISHVIVPK*
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