Trimin1|101207|CE101206_433 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|101207
Unique NameTrimin1|101207|CE101206_433
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length188
Homology
BLAST of jgi.p|Trimin1|101207 vs. uniprot
Match: A0A835YPW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPW3_9STRA)

HSP 1 Score: 229 bits (584), Expect = 7.280e-74
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0
Query:    1 MKTSAAVAYALGTIGSASAFFMPLAPRTAPGALRMVAEEGQASAVKSNMLDALKSRLSNPAISALTVGTGSDYAIEEEAXXXXXXXXXXXXXXXXXEAPKADEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLHIGTGGMADTRNPDPKDHEDPRKSISRAPTFEEYLKQRAAN 187
            MKTSAAVAYALGTIGSASAFFMPLAPRTAPGALRMVAEEGQASAVKSNMLDALKSRLSNPAISALTVGTGSDYAIEEEAXXXXXXXXXXXXXXXXXEAPKADEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLHIGTGGMADTRNPDPKDHEDPRKSISRAPTFEEYLKQRAAN
Sbjct:    1 MKTSAAVAYALGTIGSASAFFMPLAPRTAPGALRMVAEEGQASAVKSNMLDALKSRLSNPAISALTVGTGSDYAIEEEAXXXXXXXXXXXXXXXXXEAPKADEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLHIGTGGMADTRNPDPKDHEDPRKSISRAPTFEEYLKQRAAN 187          
BLAST of jgi.p|Trimin1|101207 vs. uniprot
Match: A0A835YLE0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLE0_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.900e-12
Identity = 31/40 (77.50%), Postives = 36/40 (90.00%), Query Frame = 0
Query:  147 HIGTGGMADTRNPDPKDHEDPRKSISRAPTFEEYLKQRAA 186
            H G GGMADTR+P+P DHEDPRKSIS+APTFEEY+KQ+ A
Sbjct:   35 HRGVGGMADTRDPEPVDHEDPRKSISKAPTFEEYMKQKQA 74          
BLAST of jgi.p|Trimin1|101207 vs. uniprot
Match: A0A835YTB4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTB4_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.900e-12
Identity = 31/40 (77.50%), Postives = 36/40 (90.00%), Query Frame = 0
Query:  147 HIGTGGMADTRNPDPKDHEDPRKSISRAPTFEEYLKQRAA 186
            H G GGMADTR+P+P DHEDPRKSIS+APTFEEY+KQ+ A
Sbjct:   37 HRGVGGMADTRDPEPVDHEDPRKSISKAPTFEEYMKQKQA 76          
BLAST of jgi.p|Trimin1|101207 vs. uniprot
Match: A0A7S2MQH4_9STRA (Hypothetical protein (Fragment) n=3 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MQH4_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 7.230e-12
Identity = 32/40 (80.00%), Postives = 36/40 (90.00%), Query Frame = 0
Query:  146 LHIGTGGMADTRNPDPKDHEDPRKSISRAPTFEEYLKQRA 185
            LHIG+GGMADTR+PD  +HEDPRKSIS AP+FEEYLK RA
Sbjct:   32 LHIGSGGMADTRDPDAMEHEDPRKSISAAPSFEEYLKSRA 71          
BLAST of jgi.p|Trimin1|101207 vs. uniprot
Match: A0A7S1Z902_9STRA (Hypothetical protein (Fragment) n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z902_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 3.810e-11
Identity = 31/38 (81.58%), Postives = 34/38 (89.47%), Query Frame = 0
Query:  147 HIGTGGMADTRNPDPKDHEDPRKSISRAPTFEEYLKQR 184
            HIG+GGMADTRNPD  +HEDPRKSIS AP+FEEYLK R
Sbjct:   34 HIGSGGMADTRNPDALNHEDPRKSISAAPSFEEYLKSR 71          
BLAST of jgi.p|Trimin1|101207 vs. uniprot
Match: A0A1E7F0Y3_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F0Y3_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 4.420e-11
Identity = 32/39 (82.05%), Postives = 34/39 (87.18%), Query Frame = 0
Query:  148 IGTGGMADTRNPDPKDHEDPRKSISRAPTFEEYLKQRAA 186
            IG GGMADTRNPD  D+EDPRKSIS AP+FEEYLKQR A
Sbjct:   37 IGAGGMADTRNPDAADNEDPRKSISEAPSFEEYLKQRDA 75          
BLAST of jgi.p|Trimin1|101207 vs. uniprot
Match: A0A7S3Y309_HETAK (Hypothetical protein n=4 Tax=Eukaryota TaxID=2759 RepID=A0A7S3Y309_HETAK)

HSP 1 Score: 69.3 bits (168), Expect = 6.370e-11
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 0
Query:  147 HIGTGGMADTRNPDPKDHEDPRKSISRAPTFEEYLKQRA 185
            HIG+GGMADTRNPD   HEDPRKSIS AP+FEEYLKQRA
Sbjct:   31 HIGSGGMADTRNPDTIQHEDPRKSISAAPSFEEYLKQRA 69          
BLAST of jgi.p|Trimin1|101207 vs. uniprot
Match: A0A7S2L5C2_9STRA (Pyruvate kinase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L5C2_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.160e-10
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 0
Query:  147 HIGTGGMADTRNPDPKDHEDPRKSISRAPTFEEYLKQRA 185
            HIG+GGMADTRNPD   HEDPRKSIS AP+FEEYLKQRA
Sbjct:   38 HIGSGGMADTRNPDTIQHEDPRKSISAAPSFEEYLKQRA 76          
BLAST of jgi.p|Trimin1|101207 vs. uniprot
Match: A0A7S2BTZ6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BTZ6_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 6.140e-10
Identity = 29/40 (72.50%), Postives = 34/40 (85.00%), Query Frame = 0
Query:  147 HIGTGGMADTRNPDPKDHEDPRKSISRAPTFEEYLKQRAA 186
            H+G GGM DTR+P+   HEDPRKSIS AP+FEEY+KQRAA
Sbjct:   76 HVGKGGMVDTRDPEVMTHEDPRKSISAAPSFEEYMKQRAA 115          
BLAST of jgi.p|Trimin1|101207 vs. uniprot
Match: B8LEA0_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LEA0_THAPS)

HSP 1 Score: 66.6 bits (161), Expect = 6.740e-10
Identity = 32/40 (80.00%), Postives = 36/40 (90.00%), Query Frame = 0
Query:  147 HIGTGGMADTRNPDPKDHEDPRKSISRAPTFEEYLKQRAA 186
            HIG+GGMADTRNP+   +EDPRKSIS AP+FEEYLKQRAA
Sbjct:   30 HIGSGGMADTRNPEASVNEDPRKSISAAPSFEEYLKQRAA 69          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|101207 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YPW3_9STRA7.280e-74100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YLE0_9STRA2.900e-1277.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YTB4_9STRA2.900e-1277.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2MQH4_9STRA7.230e-1280.00Hypothetical protein (Fragment) n=3 Tax=Helicothec... [more]
A0A7S1Z902_9STRA3.810e-1181.58Hypothetical protein (Fragment) n=3 Tax=Ditylum br... [more]
A0A1E7F0Y3_9STRA4.420e-1182.05Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S3Y309_HETAK6.370e-1184.62Hypothetical protein n=4 Tax=Eukaryota TaxID=2759 ... [more]
A0A7S2L5C2_9STRA1.160e-1084.62Pyruvate kinase (Fragment) n=1 Tax=Skeletonema mar... [more]
A0A7S2BTZ6_9STRA6.140e-1072.50Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
B8LEA0_THAPS6.740e-1080.00Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 91..111
NoneNo IPR availableCOILSCoilCoilcoord: 117..145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_97contigContig_97:272845..275953 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|101207mRNA_14213Tribonema minus UTEX_B_3156 mRNAContig_97 272576..275996 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|101207|CE101206_433 ID=Trimin1|101207|CE101206_433|Name=jgi.p|Trimin1|101207|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=188bp
MKTSAAVAYALGTIGSASAFFMPLAPRTAPGALRMVAEEGQASAVKSNML
DALKSRLSNPAISALTVGTGSDYAIEEEAPPAAAAPAPAATEEEEEEAPK
ADEEKEATEAKAAADAKAAAEAKAAEEAQAKGEAEAKAAAEAEAKLHIGT
GGMADTRNPDPKDHEDPRKSISRAPTFEEYLKQRAAN*
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