mRNA_8008 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|172701
Unique NamemRNA_8008
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|172701 vs. uniprot
Match: A0A835YKH1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKH1_9STRA)

HSP 1 Score: 367 bits (943), Expect = 5.750e-124
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 1 
Query:    1 MAELTRESLRKLCKEHKLYLTPSLNDKLYLHYKGFREIQNLEAYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRSADDVRAVLDLPALQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNPAVNDVPHYRKTVVSRCRDLRYLDDRPVFEDERARCDAWAAGFARGGADAAXXXXXXXXXXXXXXXXAAEERQHLAFERMMREGMEFRARKDAELAAAATAGSSAPAVAPASGEFASPRNSGDGAVSEFSGEPIVPAEESAVARQAREARAAAIMSGAP 990
            MAELTRESLRKLCKEHKLYLTPSLNDKLYLHYKGFREIQNLEAYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRSADDVRAVLDLPALQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNPAVNDVPHYRKTVVSRCRDLRYLDDRPVFEDERARCDAWAAGFARGGADAAXXXXXXXXXXXXXXXXAAEERQHLAFERMMREGMEFRARKDAELAAAATAGSSAPAVAPASGEFASPRNSGDGAVSEFSGEPIVPAEESAVARQAREARAAAIMSGAP
Sbjct:    1 MAELTRESLRKLCKEHKLYLTPSLNDKLYLHYKGFREIQNLEAYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRSADDVRAVLDLPALQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNPAVNDVPHYRKTVVSRCRDLRYLDDRPVFEDERARCDAWAAGFARGGADAAXXXXXXXXXXXXXXXXAAEERQHLAFERMMREGMEFRARKDAELAAAATAGSSAPAVAPASGEFASPRNSGDGAVSEFSGEPIVPAEESAVARQAREARAAAIMSGAP 330
[Close]
BLAST of jgi.p|Trimin1|172701 vs. uniprot
Match: A0A7S3Y6C6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6C6_HETAK)

HSP 1 Score: 150 bits (378), Expect = 6.140e-39
Identity = 174/329 (52.89%), Postives = 204/329 (62.01%), Query Frame = 1 
Query:    7 ELTRESLRKLCKEHKLYLTPSLNDKLYLHYKGFREIQNLEAYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRSADDVRAVLDLPALQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNPAVNDVPHYRKTVVSRCRDLRYLDDRPVFEDERARCDAWAAGFARGGA-DAAXXXXXXXXXXXXXXXXAAEERQHLAFERMMREGMEFRARKDAELAAAATAGSSAPAVAPASGEFASPRNSGDGAVSEFSGEPIVPAEESAVARQAREARAAAIMSGAP 990
            E+T+  L+KLC+++  Y  P LNDKLYLHYKGFR IQNL+ Y  L+V+WLEG    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +AD    VL++P+L+                              GNP V DV HYRK++VS CR+LRYLDDRPVFEDER R DAWA GF  GG  DAA                 AEER  LA E+MMREG E R  +  E    A   ++  A    S   AS    G G V+ FSGE I+  ++S   R+ RE +   +++  P
Sbjct:   12 EITKPYLKKLCRDNDGYGVPELNDKLYLHYKGFRCIQNLDEYINLKVIWLEGNGLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTADXXXXVLEVPSLETLDIQHNKIDDVGIVDVVTTMPNLRVLYLQGNPVVKDVRHYRKSLVSGCRELRYLDDRPVFEDERRRTDAWARGFRAGGTLDAANAAEREEIRRVREEKRCAEERNFLAMEQMMREGAELRLMRGEEERQRAEEQAACAAAGLPSPPRASALPPGPGDVNPFSGERILQVDDSPAVRRYREEQVRRLLARPP 340
[Close]
BLAST of jgi.p|Trimin1|172701 vs. uniprot
Match: D7FN44_ECTSI (Outer row dynein assembly protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN44_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 1.000e-33
Identity = 122/255 (47.84%), Postives = 141/255 (55.29%), Query Frame = 1 
Query:    7 ELTRESLRKLCKEHKLYLTPSLNDKLYLHYKGFREIQNLEAYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRSADDVRAVLDLPALQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNPAVNDVPHYRKTVVSRCRDLRYLDDRPVFEDERARCDAWAAGFARGGADAAXXXXXXXXXXXXXXXXAAEERQHLAFERMMREGME 771
            +LT+  L+K+C++  LY +PSLNDKLYLHYKG R+IQNLE YTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                         D V A+ DL  L                               GNP V  + HYRKT+VS+C  L+YLDDRPVF+DER RC AW+ G A GG   A                AAE+RQ+LAFE+MMREG+E
Sbjct:    2 DLTKAVLKKICRDSGLYSSPSLNDKLYLHYKGIRQIQNLEEYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSFLETLDVQHNRINDPDV---------------------VDIVSAMHDLRVLYLQ----------------------------GNPVVKSIRHYRKTLVSKCATLKYLDDRPVFDDERCRCAAWSKGMAEGGISRAQEAEREEMAKIRESKRAAEQRQYLAFEQMMREGLE 207
[Close]
BLAST of jgi.p|Trimin1|172701 vs. uniprot
Match: A0A482SU75_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SU75_9ARCH)

HSP 1 Score: 135 bits (341), Expect = 6.330e-33
Identity = 181/322 (56.21%), Postives = 206/322 (63.98%), Query Frame = 1 
Query:    1 MAELTRESLRKLCKEHKLYLTPSLNDKLYLHYKGFREIQNLEAYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRSADDVRAVLDLPALQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNPAVNDVPHYRKTVVSRCRDLRYLDDRPVFEDERARCDAWAAGFARGGA-DAAXXXXXXXXXXXXXXXXAAEERQHLAFERMMREGMEFRARKDAELAAAATAGSSAPAVAPASGEFASPRNSGDGAVSEFSGEPIVPAEESAVARQAREAR 963
            MAE+T+E LRKLCKE+ LY TPS+NDKLYLHYKGF  IQNL++YTGL+ LWLEG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          VLDLP+LQ                              GNP V  + +YRKT+++RC+ L+YLDDRPVFEDER R DAWA     GG  D A    XXXXXXXXXXXX    R   AFE++M EG + R  ++A  AA                         +  V+ FSGE IV  +ES   ++ RE R
Sbjct:    1 MAEMTKEVLRKLCKENGLYTTPSINDKLYLHYKGFHVIQNLDSYTGLKALWLEGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLDLPSLQTLDLQHNKIDDPAIIDIVAQIPDLRVLYLMGNPVVKSIRNYRKTLIARCKLLKYLDDRPVFEDERRRVDAWAKVLDNGGTQDEAQEAEXXXXXXXXXXXXXXXXRNFKAFEQLMIEGQQIRKEREAAKAAGLV----------------------EERVNLFSGETIVDVKESQELKELREKR 300
[Close]
BLAST of jgi.p|Trimin1|172701 vs. uniprot
Match: A0A7S2SDH5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SDH5_9STRA)

HSP 1 Score: 135 bits (341), Expect = 8.750e-33
Identity = 197/336 (58.63%), Postives = 231/336 (68.75%), Query Frame = 1 
Query:    1 MAELTRESLRKLCKEHK-----LYLTPSLNDKLYLHYKGFREIQNLEAYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRSADDVRAVLDLPALQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNPAVNDVPHYRKTVVSRCRDLRYLDDRPVFEDERARCDAWAAGFAR-GGADAAXXXXXXXXXXXXXXXXAAEERQHLAFERMMREGMEFRARKDAELAAAATAGSSAPAVAPASGEFASPRNSGDGAVSEFSGEPIVPAEESAVARQAREARAAAIMSGAP 990
            M E+T+E LR LCKE +     +Y+TP +ND+LYLHYKGFR+IQ LE YTGL+VLWLEG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  L SADD+  VLDLP L XXXXXXXXXXXXXXXXXXXXXXXXXXXXX GNP V  + +YRKT+++ C+DLRYLDDRPVF DER R  AW   +   G  + A                A +ER   AF+ M+R+G+E + +++AE                   +  +P           SGEPI+ + ES    +AR+ R   IM+G P
Sbjct:   44 MVEMTQEYLRNLCKEARRQNQDMYVTPEINDRLYLHYKGFRKIQALEKYTGLKVLWLEGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHLASADDISQVLDLPNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGNPVVKQIRYYRKTLIASCKDLRYLDDRPVFPDERRRVTAWKKVYDETGDYEKALEAERAEIKAIREEKKAEDERNFRAFDEMIRQGVEEKRKREAEAQ-----------------QTLNP-----------SGEPIIQSTESPAVAEARQQRLDRIMAGGP 351
[Close]
BLAST of jgi.p|Trimin1|172701 vs. uniprot
Match: A0A7S1XLS3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLS3_9STRA)

HSP 1 Score: 130 bits (326), Expect = 5.710e-31
Identity = 211/321 (65.73%), Postives = 230/321 (71.65%), Query Frame = 1 
Query:    7 ELTRESLRKLCKEHK-LYLTPSLNDKLYLHYKGFREIQNLEAYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRSADDVRAVLDLPALQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNPAVNDVPHYRKTVVSRCRDLRYLDDRPVFEDERARCDAWAAGFARGGADAAXXXXXXXXXXXXXXXXAAEERQHLAFERMMREGMEFRARKDAELAAAATAGSSAPAVAPASGEFASPRNSGDGAVSEFSGEPIVPAEESAVARQAREARA 966
            ELT E L+KLC++    Y  P LNDKLYLHYKG  +IQ LE YTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     DDV  VL+LP   XXXXXXXXXXXXXXXXXXXXXXXXXXX   GNP V ++ HYR+TVV RC+ L YLDDRPVF DER RCDAW   F  GG +AA   XXXXXXXXXXXXX        AFE+MM++G+E + + +AE A  A                 SP    +      SGEP+V  EES  AR  RE RA
Sbjct:    2 ELTPEYLKKLCRDTDGCYGVPELNDKLYLHYKGLSKIQALEKYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDDVEHVLELPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQGNPCVRNIQHYRRTVVGRCKALTYLDDRPVFPDERRRCDAWLVAFEEGGIEAAQEAXXXXXXXXXXXXXXXXXXXXXAFEKMMKDGLEKKRQSEAEDAEGAE----------------SPDK--ENLRLNPSGEPVVHLEESTAARAYREERA 304
[Close]
BLAST of jgi.p|Trimin1|172701 vs. uniprot
Match: T0QTZ5_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QTZ5_SAPDV)

HSP 1 Score: 127 bits (319), Expect = 6.040e-30
Identity = 165/323 (51.08%), Postives = 190/323 (58.82%), Query Frame = 1 
Query:    1 MAELTRESLRKLCKEHKLYLTPSLNDKLYLHYKGFREIQNLEAYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRSADDVRAVLDLPALQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNPAVNDVPHYRKTVVSRCRDLRYLDDRPVFEDERARCDAWAAGF--ARGGADAAXXXXXXXXXXXXXXXXAAEERQHLAFERMMREGMEFRARKDAELAAAATAGSSAPAVAPASGEFASPRNSGDGAVSEFSGEPIVPAEESAVARQAREAR 963
            M E+ +ESLRK+CK+  LY TPS+ND+LYLHYKGFR I+NLEAYT L+VLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          VL+LP L                               GN  V  + HYRKT++SRC++LRYLDDRPVF++ER R  AW        G  DAA                  +E     FE MMR G   R R++ EL                        N  +  VS +SGE I+  E+ A+  +ARE R
Sbjct:    1 MLEMNKESLRKICKDLDLYSTPSINDRLYLHYKGFRRIENLEAYTELKVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLELPTLAVLDIQSNRIADVDVVDILAAMPNLRVLYLQGNDVVKHIKHYRKTIISRCKELRYLDDRPVFDEERRRVTAWGRVMEETNGDVDAALEAERAELALIRQEKKDKDEANFRYFEDMMRAGKAERERRERELH----------------------DNQREAEVSPYSGEKILHVEDCAMVHEARERR 301
[Close]
BLAST of jgi.p|Trimin1|172701 vs. uniprot
Match: A0A1V9YZD4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZD4_9STRA)

HSP 1 Score: 122 bits (305), Expect = 5.550e-28
Identity = 162/323 (50.15%), Postives = 189/323 (58.51%), Query Frame = 1 
Query:    1 MAELTRESLRKLCKEHKLYLTPSLNDKLYLHYKGFREIQNLEAYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRSADDVRAVLDLPALQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNPAVNDVPHYRKTVVSRCRDLRYLDDRPVFEDERARCDAWAAGF--ARGGADAAXXXXXXXXXXXXXXXXAAEERQHLAFERMMREGMEFRARKDAELAAAATAGSSAPAVAPASGEFASPRNSGDGAVSEFSGEPIVPAEESAVARQAREAR 963
            M E+ +ESLRK+CKE  LY TP++ND+LYLHYKGFR IQNLE YT L+VLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           L++P+L                               GN  V  +  YRKT++ RC++LRYLDDRPVF++ER R  AW        G  +AA                  +E     FE MMR+G   R RK+ EL                           + AV+ +SGE I+  E+ A+ RQARE R
Sbjct:    1 MLEMNKESLRKICKELDLYTTPNINDRLYLHYKGFRRIQNLEDYTELKVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEIPSLAVLDIQSNRINDATVVDVLAQMTNLRVLYLQGNDVVKHIKQYRKTIIYRCKELRYLDDRPVFDEERRRVTAWGRAMEETNGDLEAALEAERAELAVIRQEKKDKDEANFRYFEEMMRKGKAERDRKEREL---------------------HDNQREEVAVNPYSGEKIIEVEDCALVRQAREHR 302
[Close]
BLAST of jgi.p|Trimin1|172701 vs. uniprot
Match: A0A2D4BT91_PYTIN (Fructose-bisphosphate aldolase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BT91_PYTIN)

HSP 1 Score: 124 bits (311), Expect = 8.930e-28
Identity = 193/324 (59.57%), Postives = 224/324 (69.14%), Query Frame = 1 
Query:    1 MAELTRESLRKLCKEHKLYLTPSLNDKLYLHYKGFREIQNLEAYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRSADDVRAVLDLPALQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNPAVNDVPHYRKTVVSRCRDLRYLDDRPVFEDERARCDAW--AAGFARGGADAAXXXXXXXXXXXXXXXXAAEERQHLAFERMMREGM-EFRARKDAELAAAATAGSSAPAVAPASGEFASPRNSGDGAVSEFSGEPIVPAEESAVARQAREAR 963
            M E+ +  L+KLC+EH LY+TPS+NDKLYLHYKGFR I+NLE YTGL+VLWLEG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   SA D+  VL+LP L   XXXXXXXXXXXXXXXXXXXXXXXXXXXX    V  +  YRKT+V RCR L+YLDDRPVF+DER R DAW  A   + G   AA                  + +  L FE+++ +G  +    K A  A A TA S+            SP   G   ++ FSGE I+P ++  + ++ RE R
Sbjct:  379 MVEMEKALLKKLCREHDLYVTPSINDKLYLHYKGFRSIKNLEEYTGLKVLWLEGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASDIEHVLELPRLAVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVVKHIKQYRKTLVYRCRQLKYLDDRPVFDDERRRVDAWGKALDASNGDYKAAQEAEREEMDKIRQEKRDRDRQNFLHFEQLIADGRRKLELEKQAAAAGAITAESTVD-------NQQSPSKDGP-EINPFSGERIIPTQDCELLQKQREKR 694
[Close]
BLAST of jgi.p|Trimin1|172701 vs. uniprot
Match: A0A485KC60_9STRA (Aste57867_4075 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KC60_9STRA)

HSP 1 Score: 120 bits (300), Expect = 3.200e-27
Identity = 171/326 (52.45%), Postives = 201/326 (61.66%), Query Frame = 1 
Query:    7 ELTRESLRKLCKEHKLYLTPSLNDKLYLHYKGFREIQNLEAYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRSADDVRAVLDLPALQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNPAVNDVPHYRKTVVSRCRDLRYLDDRPVFEDERARCDAW--AAGFARGGADAAXXXXXXXXXXXXXXXXAAEERQHLAFERMMREGMEFRARKDAELAAAATAGSSAPAVAPASGEFASPRNSGDGAVSEFSGEPIVPAEESAVARQAREARAAAIM 978
            E+ + SLRK+CK+  LY TPS+ND+LYLHYKGFR I+NLE YT L+V+WLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          VL +P+L                    XXXXXXXX   GN  V  +  YRKTVV+RC+ LRYLDDRPVF++ER R DAW  A     G  +AA                  +E     FE +MR+G   R R++AE    A                    N+    +S +SGE I+P E+  + R ARE R AA++
Sbjct:    2 EMNKASLRKICKDLDLYTTPSINDRLYLHYKGFRRIENLEEYTNLKVIWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLQVPSLAVLDIQSNRITDVAVIDILSXXXXXXXXYLQGNDVVKHIKQYRKTVVARCKQLRYLDDRPVFDEERRRVDAWYKALEETNGDMEAALQAERDELAVIRQEKKDKDEANFRYFEEIMRKGKAERDRREAESNNQA--------------------NNDQIEISPYSGEKILPVEDCKLVRVARERRWAAVV 307
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|172701 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YKH1_9STRA5.750e-124100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S3Y6C6_HETAK6.140e-3952.89Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
D7FN44_ECTSI1.000e-3347.84Outer row dynein assembly protein n=1 Tax=Ectocarp... [more]
A0A482SU75_9ARCH6.330e-3356.21Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S2SDH5_9STRA8.750e-3358.63Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1XLS3_9STRA5.710e-3165.73Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
T0QTZ5_SAPDV6.040e-3051.08Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9YZD4_9STRA5.550e-2850.15Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A2D4BT91_PYTIN8.930e-2859.57Fructose-bisphosphate aldolase n=1 Tax=Pythium ins... [more]
A0A485KC60_9STRA3.200e-2752.45Aste57867_4075 protein n=1 Tax=Aphanomyces stellat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_94contigContig_94:552622..553882 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|172701|e_gw1.94.48.1
BRITEko00000,ko04812
KEGG koko:K19750
GOsGO:0000226,GO:0001578,GO:0003341,GO:0003352,GO:0003356,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0008104,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0032879,GO:0032886,GO:0033036,GO:0033365,GO:0034613,GO:0034622,GO:0035082,GO:0040012,GO:0040017,GO:0043933,GO:0044085,GO:0044297,GO:0044424,GO:0044464,GO:0044782,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051179,GO:0051270,GO:0051272,GO:0051641,GO:0060271,GO:0060632,GO:0065003,GO:0065007,GO:0070286,GO:0070727,GO:0070925,GO:0071840,GO:0120031,GO:0120036,GO:1902019,GO:2000145,GO:2000147,GO:2000155
Preferred nameODA7
Descriptiondynein complex binding
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs2CMIN@1|root,2QQFE@2759|Eukaryota
Evalue1.64e-34
Seed ortholog2880.D7FN44
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionouter row dynein assembly protein
Ec32 orthologEc-06_008340.1
TranscriptId173023
TrackFilteredModels1
ProteinId172701
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|172701gene_8008Tribonema minus UTEX_B_3156 geneContig_94 552622..553882 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8008_1exon_8008_1Tribonema minus UTEX_B_3156 exonContig_94 552622..552720 +
exon_8008_2exon_8008_2Tribonema minus UTEX_B_3156 exonContig_94 552872..553660 +
exon_8008_3exon_8008_3Tribonema minus UTEX_B_3156 exonContig_94 553781..553882 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8008CDS_8008Tribonema minus UTEX_B_3156 CDSContig_94 552622..552720 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|172701Trimin1|172701|e_gw1.94.48.1Tribonema minus UTEX_B_3156 polypeptideContig_94 552622..553882 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8008 ID=mRNA_8008|Name=jgi.p|Trimin1|172701|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=990bp|location=Sequence derived from alignment at Contig_94:552622..553882+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCAGAGCTGACGAGAGAGAGTCTGCGCAAGCTCTGCAAGGAGCACAA
GCTCTACCTGACACCCAGCCTCAATGACAAGCTTTACCTGCACTACAAGG
GTTTTCGCGAGATCCAGAACCTCGAGGCCTACACGGGCCTGCGGGTGCTG
TGGCTGGAGGGCAATGGCATAGCGCGGATACAGGGCCTGGAGAGCCAGAC
CGAGATGCGCACCCTCTACCTGCAGGAGAACCTCATCGAGAAGATTGAGG
GGCTGGAGGCCATGACCCACCTCGACACCCTCAACCTCTCCAAGAACTTC
ATCAAGACCCTCAGCGGCGTGTCCCACCTCAAGCACCTCACCACGCTGCT
GCTCGCGCACAACCAGCTGCGCAGCGCGGACGACGTGCGCGCCGTCCTCG
ACCTCCCCGCGCTGCAGACGCTCGACCTGCAGCACAACAGGATCGCGGAC
GCCGCCATCGTCGACGTCGTCGCCGCCATCCCCGGCCTGCGCGTCCTGTA
CCTTCAGGGCAACCCCGCGGTGAACGACGTGCCGCACTACCGCAAGACCG
TCGTGTCGCGCTGCCGCGATCTGCGCTACCTAGACGACAGGCCCGTCTTC
GAGGACGAGCGCGCGCGCTGCGACGCGTGGGCGGCGGGCTTCGCGCGCGG
CGGCGCGGACGCGGCGGCGGCGGCGGAGCGCGCCGCCATCGCGCGCCGCC
GCGACGAGAAGCGCGCCGCCGAGGAGCGCCAGCACCTCGCGTTCGAGCGC
ATGATGCGCGAGGGCATGGAGTTCCGCGCGCGCAAGGACGCGGAGCTCGC
TGCCGCCGCCACGGCCGGCAGCAGCGCTCCGGCGGTGGCGCCTGCCAGCG
GCGAGTTCGCATCTCCCAGGAACAGCGGCGATGGGGCTGTCAGCGAGTTC
AGCGGCGAACCCATTGTGCCTGCCGAAGAGTCGGCGGTTGCGCGACAGGC
GCGGGAGGCGCGCGCCGCAGCGATCATGAGCGGAGCGCCC
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protein sequence of jgi.p|Trimin1|172701

>Trimin1|172701|e_gw1.94.48.1 ID=Trimin1|172701|e_gw1.94.48.1|Name=jgi.p|Trimin1|172701|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=330bp
MAELTRESLRKLCKEHKLYLTPSLNDKLYLHYKGFREIQNLEAYTGLRVL
WLEGNGIARIQGLESQTEMRTLYLQENLIEKIEGLEAMTHLDTLNLSKNF
IKTLSGVSHLKHLTTLLLAHNQLRSADDVRAVLDLPALQTLDLQHNRIAD
AAIVDVVAAIPGLRVLYLQGNPAVNDVPHYRKTVVSRCRDLRYLDDRPVF
EDERARCDAWAAGFARGGADAAAAAERAAIARRRDEKRAAEERQHLAFER
MMREGMEFRARKDAELAAAATAGSSAPAVAPASGEFASPRNSGDGAVSEF
SGEPIVPAEESAVARQAREARAAAIMSGAP
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mRNA from alignment at Contig_94:552622..553882+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8008 ID=mRNA_8008|Name=jgi.p|Trimin1|172701|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1261bp|location=Sequence derived from alignment at Contig_94:552622..553882+ (Tribonema minus UTEX_B_3156 )
ATGGCAGAGCTGACGAGAGAGAGTCTGCGCAAGCTCTGCAAGGAGCACAA
GCTCTACCTGACACCCAGCCTCAATGACAAGCTTTACCTGCACTACAAGG
TGAATCACCAGCGCTGAGATGTAGCAAGCACTCAATCGCTGACGGCAGTC
AACGACATCACCACTCGTGATGCCAAAGTTTGTCAATCTCAACAAACTAC
CCAATTTTTTGCTGCTGCTGTGCTTTGCTTTGCGTTGTCAACGCTCTCAG
GGTTTTCGCGAGATCCAGAACCTCGAGGCCTACACGGGCCTGCGGGTGCT
GTGGCTGGAGGGCAATGGCATAGCGCGGATACAGGGCCTGGAGAGCCAGA
CCGAGATGCGCACCCTCTACCTGCAGGAGAACCTCATCGAGAAGATTGAG
GGGCTGGAGGCCATGACCCACCTCGACACCCTCAACCTCTCCAAGAACTT
CATCAAGACCCTCAGCGGCGTGTCCCACCTCAAGCACCTCACCACGCTGC
TGCTCGCGCACAACCAGCTGCGCAGCGCGGACGACGTGCGCGCCGTCCTC
GACCTCCCCGCGCTGCAGACGCTCGACCTGCAGCACAACAGGATCGCGGA
CGCCGCCATCGTCGACGTCGTCGCCGCCATCCCCGGCCTGCGCGTCCTGT
ACCTTCAGGGCAACCCCGCGGTGAACGACGTGCCGCACTACCGCAAGACC
GTCGTGTCGCGCTGCCGCGATCTGCGCTACCTAGACGACAGGCCCGTCTT
CGAGGACGAGCGCGCGCGCTGCGACGCGTGGGCGGCGGGCTTCGCGCGCG
GCGGCGCGGACGCGGCGGCGGCGGCGGAGCGCGCCGCCATCGCGCGCCGC
CGCGACGAGAAGCGCGCCGCCGAGGAGCGCCAGCACCTCGCGTTCGAGCG
CATGATGCGCGAGGGCATGGAGTTCCGCGCGCGCAAGGACGCGGAGCTCG
CTGCCGCCGCCACGGCCGGCAGCAGCGCTCCGGCGGTGGCGCCTGCCAGC
GGCGAGTTCGCATCTCCCAGGAACAGCGGCGATGGGGCTGTGGCAGCGGC
GCCGGAAGGAGCAGCGGCGGAGGCGGCTGTGGCAGCAACGGCATCGGCGG
CGGCGGCACCCACAGCGGCGGTCGCCGCAGCGGCGGCGGCGGCTGCGGCG
GTGGCGGAGGTCAGCGAGTTCAGCGGCGAACCCATTGTGCCTGCCGAAGA
GTCGGCGGTTGCGCGACAGGCGCGGGAGGCGCGCGCCGCAGCGATCATGA
GCGGAGCGCCC
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Coding sequence (CDS) from alignment at Contig_94:552622..553882+

>mRNA_8008 ID=mRNA_8008|Name=jgi.p|Trimin1|172701|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=990bp|location=Sequence derived from alignment at Contig_94:552622..553882+ (Tribonema minus UTEX_B_3156 )
ATGGCAGAGCTGACGAGAGAGAGTCTGCGCAAGCTCTGCAAGGAGCACAA
GCTCTACCTGACACCCAGCCTCAATGACAAGCTTTACCTGCACTACAAGG
GTTTTCGCGAGATCCAGAACCTCGAGGCCTACACGGGCCTGCGGGTGCTG
TGGCTGGAGGGCAATGGCATAGCGCGGATACAGGGCCTGGAGAGCCAGAC
CGAGATGCGCACCCTCTACCTGCAGGAGAACCTCATCGAGAAGATTGAGG
GGCTGGAGGCCATGACCCACCTCGACACCCTCAACCTCTCCAAGAACTTC
ATCAAGACCCTCAGCGGCGTGTCCCACCTCAAGCACCTCACCACGCTGCT
GCTCGCGCACAACCAGCTGCGCAGCGCGGACGACGTGCGCGCCGTCCTCG
ACCTCCCCGCGCTGCAGACGCTCGACCTGCAGCACAACAGGATCGCGGAC
GCCGCCATCGTCGACGTCGTCGCCGCCATCCCCGGCCTGCGCGTCCTGTA
CCTTCAGGGCAACCCCGCGGTGAACGACGTGCCGCACTACCGCAAGACCG
TCGTGTCGCGCTGCCGCGATCTGCGCTACCTAGACGACAGGCCCGTCTTC
GAGGACGAGCGCGCGCGCTGCGACGCGTGGGCGGCGGGCTTCGCGCGCGG
CGGCGCGGACGCGGCGGCGGCGGCGGAGCGCGCCGCCATCGCGCGCCGCC
GCGACGAGAAGCGCGCCGCCGAGGAGCGCCAGCACCTCGCGTTCGAGCGC
ATGATGCGCGAGGGCATGGAGTTCCGCGCGCGCAAGGACGCGGAGCTCGC
TGCCGCCGCCACGGCCGGCAGCAGCGCTCCGGCGGTGGCGCCTGCCAGCG
GCGAGTTCGCATCTCCCAGGAACAGCGGCGATGGGGCTGTCAGCGAGTTC
AGCGGCGAACCCATTGTGCCTGCCGAAGAGTCGGCGGTTGCGCGACAGGC
GCGGGAGGCGCGCGCCGCAGCGATCATGAGCGGAGCGCCC
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