mRNA_11286 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|352359
Unique Name	mRNA_11286
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|352359 vs. uniprot
Match: A0A835ZBN4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBN4_9STRA)

HSP 1 Score: 1153 bits (2983), Expect = 0.000e+0
Identity = 711/711 (100.00%), Postives = 711/711 (100.00%), Query Frame = 1

Query:    1 MALRRPPLTNTRFPRINGSVAEELYRPIQTWELDNAWRAFTRPDPENNGVVLDSSLLPGQSAPPPGLADGELISNDLMDVVTDLMNNRQVQDAVLGTDIVHNMFAALAHDVGTGFADARPPPPRPPASRNRFAHLDSLSVFPGAHYGPPPLPDAAAEHHHQQHGLFLEPLLQLRGYAGPGSEWSGPLGGTYRDSSRAQAAQRGTQADAAQRQRPAAMAXXXXXXXXXXXXXXXXXXXXNEEAFKRELEDYTCALCLDATVGAHLCTCRCNKIFCGDSLSPVKLADCFGFPGPSPLLSAAAAARHAIRARTEESTRAAHYVFAQRKCILEYLSRHAVRRVLPDGRMGLACPTCSQRVDSVSAFPLMDATVERFVRGAPACASRDDWYARDAQWQRLHATGWPDKXXXXXXXXXXXXVRCSSDLRLVNCVNFFFEVGRAGVRVARNCHARDAAXXXXXXXXXXXXWRRLRGWPDKLRASGWHDKAREAVERRAVPTDPPDLSGGGSGSTGXDGSSAHHHVDSGDVPFAARADPLDGNPGRASAASXXXXXXXAPSAGDSAPRXXXXXXXXEYGTAAWWAALPEPVRAHGLKIFSLGGSGSGXXXXXXXXXXXXXCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARHGARASSKAFLLRALLPIIALLTRRHTPMELQQRGGSGAASLLAWQCSAL 2133
            MALRRPPLTNTRFPRINGSVAEELYRPIQTWELDNAWRAFTRPDPENNGVVLDSSLLPGQSAPPPGLADGELISNDLMDVVTDLMNNRQVQDAVLGTDIVHNMFAALAHDVGTGFADARPPPPRPPASRNRFAHLDSLSVFPGAHYGPPPLPDAAAEHHHQQHGLFLEPLLQLRGYAGPGSEWSGPLGGTYRDSSRAQAAQRGTQADAAQRQRPAAMAXXXXXXXXXXXXXXXXXXXXNEEAFKRELEDYTCALCLDATVGAHLCTCRCNKIFCGDSLSPVKLADCFGFPGPSPLLSAAAAARHAIRARTEESTRAAHYVFAQRKCILEYLSRHAVRRVLPDGRMGLACPTCSQRVDSVSAFPLMDATVERFVRGAPACASRDDWYARDAQWQRLHATGWPDKXXXXXXXXXXXXVRCSSDLRLVNCVNFFFEVGRAGVRVARNCHARDAAXXXXXXXXXXXXWRRLRGWPDKLRASGWHDKAREAVERRAVPTDPPDLSGGGSGSTGXDGSSAHHHVDSGDVPFAARADPLDGNPGRASAASXXXXXXXAPSAGDSAPRXXXXXXXXEYGTAAWWAALPEPVRAHGLKIFSLGGSGSGXXXXXXXXXXXXXCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARHGARASSKAFLLRALLPIIALLTRRHTPMELQQRGGSGAASLLAWQCSAL
Sbjct:    1 MALRRPPLTNTRFPRINGSVAEELYRPIQTWELDNAWRAFTRPDPENNGVVLDSSLLPGQSAPPPGLADGELISNDLMDVVTDLMNNRQVQDAVLGTDIVHNMFAALAHDVGTGFADARPPPPRPPASRNRFAHLDSLSVFPGAHYGPPPLPDAAAEHHHQQHGLFLEPLLQLRGYAGPGSEWSGPLGGTYRDSSRAQAAQRGTQADAAQRQRPAAMAXXXXXXXXXXXXXXXXXXXXNEEAFKRELEDYTCALCLDATVGAHLCTCRCNKIFCGDSLSPVKLADCFGFPGPSPLLSAAAAARHAIRARTEESTRAAHYVFAQRKCILEYLSRHAVRRVLPDGRMGLACPTCSQRVDSVSAFPLMDATVERFVRGAPACASRDDWYARDAQWQRLHATGWPDKXXXXXXXXXXXXVRCSSDLRLVNCVNFFFEVGRAGVRVARNCHARDAAXXXXXXXXXXXXWRRLRGWPDKLRASGWHDKAREAVERRAVPTDPPDLSGGGSGSTGXDGSSAHHHVDSGDVPFAARADPLDGNPGRASAASXXXXXXXAPSAGDSAPRXXXXXXXXEYGTAAWWAALPEPVRAHGLKIFSLGGSGSGXXXXXXXXXXXXXCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARHGARASSKAFLLRALLPIIALLTRRHTPMELQQRGGSGAASLLAWQCSAL 711

[Close]

BLAST of jgi.p|Trimin1|352359 vs. uniprot
Match: A0A835YR15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR15_9STRA)

HSP 1 Score: 107 bits (268), Expect = 5.250e-21
Identity = 61/167 (36.53%), Postives = 83/167 (49.70%), Query Frame = 1

Query:  718 EEAFKRELEDYTCALCLDATVGAHLCTCRCNKIFCGDSLSPVKLADCFGFPGPSPLLSAAAAARHAIRARTEESTRAAHYVFAQRKCILEYLSRHAVRRV-LPDG--RMGLACPTCSQRVDSVSAFPLMDATVERFVRGAPACASRDDWYARDAQWQRLHATGWPDK 1209
            E AF++EL DY CALC +  VGAH C+CRCN IFCG+                                                 C+L  LS+ A ++   P+   R G +CP+C  RVDS + F ++DA V RFVR APACAS++ W AR A+W++L+   WP +
Sbjct:  241 ERAFRQELGDYACALCRETVVGAHNCSCRCNGIFCGE-------------------------------------------------CLLTDLSKQAAQQCSAPNAPARGGPSCPSCRARVDSANGFGVIDAAVGRFVRAAPACASKERWVARGARWEQLNEHKWPQQ 358

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|352359 vs. uniprot

BLAST of jgi.p|Trimin1|352359 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835ZBN4_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YR15_9STRA	5.250e-21	36.53	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_116	contig	Contig_116:243999..250598 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|352359\|estExt_Genemark1.C_Ctg_1160044
Hectar predicted targeting category	other localisation
TranscriptId	352681
Track	FilteredModels1
ProteinId	352359

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352359	gene_11286	Tribonema minus UTEX_B_3156	gene	Contig_116 243999..250598 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352359	Trimin1\|352359\|estExt_Genemark1.C_Ctg_1160044	Tribonema minus UTEX_B_3156	polypeptide	Contig_116 243999..250530 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_11286_1	exon_11286_1	Tribonema minus UTEX_B_3156	exon	Contig_116 243999..244085 +
exon_11286_2	exon_11286_2	Tribonema minus UTEX_B_3156	exon	Contig_116 244603..244663 +
exon_11286_3	exon_11286_3	Tribonema minus UTEX_B_3156	exon	Contig_116 245395..245540 +
exon_11286_4	exon_11286_4	Tribonema minus UTEX_B_3156	exon	Contig_116 245971..246251 +
exon_11286_5	exon_11286_5	Tribonema minus UTEX_B_3156	exon	Contig_116 246826..247073 +
exon_11286_6	exon_11286_6	Tribonema minus UTEX_B_3156	exon	Contig_116 247171..247220 +
exon_11286_7	exon_11286_7	Tribonema minus UTEX_B_3156	exon	Contig_116 247468..247505 +
exon_11286_8	exon_11286_8	Tribonema minus UTEX_B_3156	exon	Contig_116 247961..248019 +
exon_11286_9	exon_11286_9	Tribonema minus UTEX_B_3156	exon	Contig_116 248178..248416 +
exon_11286_10	exon_11286_10	Tribonema minus UTEX_B_3156	exon	Contig_116 248547..248726 +
exon_11286_11	exon_11286_11	Tribonema minus UTEX_B_3156	exon	Contig_116 248847..248876 +
exon_11286_12	exon_11286_12	Tribonema minus UTEX_B_3156	exon	Contig_116 248973..248999 +
exon_11286_13	exon_11286_13	Tribonema minus UTEX_B_3156	exon	Contig_116 249344..249675 +
exon_11286_14	exon_11286_14	Tribonema minus UTEX_B_3156	exon	Contig_116 249749..250085 +
exon_11286_15	exon_11286_15	Tribonema minus UTEX_B_3156	exon	Contig_116 250510..250598 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_11286	CDS_11286	Tribonema minus UTEX_B_3156	CDS	Contig_116 243999..244085 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_11286	UTR3_11286	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_116 250531..250598 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_116:243999..250598+
coding sequence from alignment at Contig_116:243999..250598+

spliced messenger RNA

>mRNA_11286 ID=mRNA_11286|Name=jgi.p|Trimin1|352359|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2204bp|location=Sequence derived from alignment at Contig_116:243999..250598+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTCTCCGTCGACCTCCGCTCACCAACACGCGCTTTCCGCGCATCAA
TGGAAGCGTGGCCGAGGAGCTGTACCGGCCGATCCAGACTTGGGAGTTGG
ACAATGCGTGGAGAGCGTTCACTCGGCCGGACCCTGAAAACAATGGCGTC
GTGCTGGATTCATCGCTGTTGCCCGGGCAGTCCGCGCCCCCCCCGGGCCT
GGCCGACGGCGAGCTCATATCCAACGACCTCATGGACGTCGTGACGGACC
TCATGAACAACAGACAAGTGCAGGACGCGGTGCTCGGCACGGATATCGTC
CACAACATGTTTGCGGCGCTGGCGCACGACGTCGGCACCGGCTTCGCGGA
CGCGCGCCCCCCGCCGCCGCGCCCCCCCGCCTCACGTAACCGCTTCGCGC
ACCTCGACAGCCTGTCGGTGTTTCCGGGCGCGCACTACGGGCCGCCGCCG
CTGCCGGATGCTGCTGCTGAGCATCACCACCAGCAGCACGGCCTGTTCCT
CGAGCCGCTGCTGCAGCTGCGGGGGTACGCGGGGCCGGGGTCCGAGTGGT
CGGGGCCCCTGGGGGGGACGTACAGGGACAGCTCGCGCGCGCAGGCAGCG
CAGCGCGGCACGCAAGCGGATGCTGCGCAGCGGCAGCGGCCGGCGGCGAT
GGCGGCAGCGGCGGGGGCGGAGGCGGCAGCGGCGCGCTTCGCGGCGGCGG
CGGCGGCGGCGGCGAACGAGGAGGCGTTCAAGCGCGAGCTTGAGGACTAC
ACGTGCGCGCTGTGCCTGGACGCGACCGTCGGCGCGCACCTGTGCACATG
CCGCTGCAACAAGATCTTCTGCGGCGACTCGTTGTCGCCAGTCAAGTTGG
CGGACTGCTTCGGGTTCCCTGGGCCCTCGCCGCTGCTGTCGGCGGCGGCA
GCAGCGCGCCACGCCATCAGGGCTCGCACGGAGGAGTCGACGCGCGCCGC
GCACTACGTATTCGCGCAGCGCAAGTGCATCCTAGAGTACCTCTCGCGCC
ACGCCGTGCGCCGCGTGCTGCCAGACGGGCGCATGGGCCTCGCGTGCCCG
ACGTGCTCGCAGCGCGTCGACTCGGTCAGCGCCTTTCCGCTCATGGACGC
GACGGTGGAGCGCTTTGTGCGCGGCGCGCCGGCGTGCGCGTCGCGCGACG
ACTGGTACGCACGCGACGCTCAGTGGCAGCGCCTGCACGCAACCGGCTGG
CCCGACAAGTGGCAGCGCCTGCACGCGAGCGGCTGGCCCGACAAGGTGAG
GTGCTCGTCCGATCTTCGGCTGGTGAATTGTGTAAACTTCTTTTTTGAAG
TGGGGCGCGCCGGCGTGCGCGTTGCGCGAAACTGTCATGCGCGCGACGCG
GCTTGGCGGCGCCTGCGCGCGAGCGGCTGGCCCGACAAGTGGCGGCGCCT
GCGCGGCTGGCCCGACAAGCTGCGCGCGAGCGGCTGGCACGACAAGGCGC
GCGAGGCGGTGGAGCGGCGCGCCGTGCCCACGGACCCCCCCGACCTCAGC
GGCGGCGGCAGCGGCAGCACTGGCGGTGACGGCAGCAGCGCTCATCACCA
CGTCGACAGCGGCGATGTCCCCTTTGCCGCGCGCGCGGACCCCCTCGACG
GCAACCCCGGCCGCGCCTCCGCGGCGAGCACTGCTGCTGCTGCTGCCGCT
GCGCCGAGCGCAGGCGACTCCGCGCCGCGCGCCGCCGCCGCTGCTGCCGC
GCCGGAGTACGGCACAGCGGCGTGGTGGGCGGCGCTGCCGGAGCCGGTGC
GCGCGCACGGCTTGAAGATCTTTTCGCTCGGCGGCAGCGGCAGCGGCGGC
AGCGGCGGCGGCGGCAGCGGCAGTGGCAGCGGCAGCTGCAGCGGCGGCGG
CAGTAGTGGCGGCGGCGGCAGCGGCGGCGGCAGCGGCGGCGGCGGCGGTA
GCGATGGCGGCAGCGGCGGCGGCAGCGGCGGCGGCGGCGGTAGCGGTGGC
GGCAGCGGCGGCAGCGGCGCGGCAGAAGCGCGGCATGGCGCTCGGGCGTC
GTCAAAGGCGTTCTTGCTGCGTGCACTGCTGCCTATCATCGCGCTGCTCA
CGCGCCGGCACACGCCGATGGAACTGCAGCAGCGCGGCGGTAGTGGCGCA
GCGAGTCTACTGGCGTGGCAGTGCTCAGCACTATGAGCGCGGCGCCAGCG
CACTCACACATGCCATGTTTGCGCTGTTTGTTAATGTAACACGTGCAGGT
TTCA

protein sequence of jgi.p|Trimin1|352359

>Trimin1|352359|estExt_Genemark1.C_Ctg_1160044 ID=Trimin1|352359|estExt_Genemark1.C_Ctg_1160044|Name=jgi.p|Trimin1|352359|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=712bp
MALRRPPLTNTRFPRINGSVAEELYRPIQTWELDNAWRAFTRPDPENNGV
VLDSSLLPGQSAPPPGLADGELISNDLMDVVTDLMNNRQVQDAVLGTDIV
HNMFAALAHDVGTGFADARPPPPRPPASRNRFAHLDSLSVFPGAHYGPPP
LPDAAAEHHHQQHGLFLEPLLQLRGYAGPGSEWSGPLGGTYRDSSRAQAA
QRGTQADAAQRQRPAAMAAAAGAEAAAARFAAAAAAAANEEAFKRELEDY
TCALCLDATVGAHLCTCRCNKIFCGDSLSPVKLADCFGFPGPSPLLSAAA
AARHAIRARTEESTRAAHYVFAQRKCILEYLSRHAVRRVLPDGRMGLACP
TCSQRVDSVSAFPLMDATVERFVRGAPACASRDDWYARDAQWQRLHATGW
PDKWQRLHASGWPDKVRCSSDLRLVNCVNFFFEVGRAGVRVARNCHARDA
AWRRLRASGWPDKWRRLRGWPDKLRASGWHDKAREAVERRAVPTDPPDLS
GGGSGSTGGDGSSAHHHVDSGDVPFAARADPLDGNPGRASAASTAAAAAA
APSAGDSAPRAAAAAAAPEYGTAAWWAALPEPVRAHGLKIFSLGGSGSGG
SGGGGSGSGSGSCSGGGSSGGGGSGGGSGGGGGSDGGSGGGSGGGGGSGG
GSGGSGAAEARHGARASSKAFLLRALLPIIALLTRRHTPMELQQRGGSGA
ASLLAWQCSAL*

mRNA from alignment at Contig_116:243999..250598+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_11286 ID=mRNA_11286|Name=jgi.p|Trimin1|352359|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6600bp|location=Sequence derived from alignment at Contig_116:243999..250598+ (Tribonema minus UTEX_B_3156 )
ATGGCTCTCCGTCGACCTCCGCTCACCAACACGCGCTTTCCGCGCATCAA
TGGAAGCGTGGCCGAGGAGCTGTACCGGCCGATCCAGGTACGGAGAGGAT
GAGGGACGTTGGCATCCTGCTGCTGATGCACGCGCGTGCTCAAACTCTCA
CTGATCTGCTGTTATGTGTCTAGACAATGATGCGTTAACAATTTGTCGTA
TGGTTTGTAGTCTGGAAAATTACAGCAGCTTGCCTTGTGGCGTTTTGCGG
TGCCGCGTGTTTCTGGTCTCGAAACTTGCACTTCCTTCTCCCATCAGGCT
TGAATTACTTGAACAATCGTTTGGTTGCTTAGCCATGCATACCCAAGGAT
CACACCGTGAAGTGCCTCACTTTCCTGCATCACGCCTGCGCATGAACGCT
TCCCATCACAGCCCTCATGTTTCTGACATTGCCCCTCGTTTTGCCATTCA
CTGCATGTTCTACTGAGGCATTTACATTCCTTGCGCATCAGTGACATTTT
GTGTGCAAGAAATGCCCGGTGCCTTCATCAAACACCCATCGCTCGTCCCC
TCAGTGTTCTCAGTGTTGCATGGTTCTGCGCGTGTCCCCACATCTGTTCC
GCAGACTTGGGAGTTGGACAATGCGTGGAGAGCGTTCACTCGGCCGGACC
CTGAAAACAATGGCGGTGAGCCTTGCGCATACACCAATTATATATCTCCG
TGACTACAATTAGTCTACTACGCTAGACAATCCATGTGGTAGACATCGTC
TTCACCAGAACTAACGTTTTGTCAAGCGCAATGTAAGCACGCAGCGTGCA
TCGTACGTGCGTTGGCGCCACCCCAGCCTCGTGTGTGCGCCGGCCCCCTG
AAGGCGCCCTCTGCCTGTCCCCGTGCACGATGCCACTGCAATCTTTCTCA
AATGTGTCAGCTACGCGCGCTGCAGCATTGTGCCATGACGCCGTGACGGG
TCTCTCCTCCCCCCCCCTCTATGTTTCTATGTTTGGGCTCGCGCAGATGT
GTCAACTGCAGGGCGCAGCAGCATCGCGCCGTGACTTATCCCCCCCTCCC
CCCCCCTCATCACACCCCCCCCCCCGCCGCACAGCACAGCCGCTACCCAC
ACTCACACGGTAGTTTCACCAGTCAACATGATCAAAGGAACCGACTGGAC
TCAACTTTGCTCTTCGACTCGACTCGACTCGGCTCCGCTCCGCCGCTTGC
GCGTGCGCACATGCAATCGTGCTGGACTCGTCGCTGTTGTGCACGCGCAG
TCCACGCCCCCCCCCCCTCCCCCCTGCTCCCCCAACTCTCTGCTTCCGCG
TGCCTCAAATGTGTCAACCACAGGCGCCGCAGCATTGTGCCGTCACGTGA
CCCCCCCCCCCCCCCCCCCCCCTCCCTTGCACCCCCGCATGCGCAGTCGT
GCTGGATTCATCGCTGTTGCCCGGGCAGTCCGCGCCCCCCCCGGGCCTGG
CCGACGGCGAGCTCATATCCAACGACCTCATGGACGTCGTGACGGACCTC
ATGAACAACAGACAAGTGCAGGACGCGGTGCTCGGCACGGATGTGAGTCA
GTCGGTTGAGCGCTGCCGCCGCTGCCGCTGCTGCTGCTGCTGCGGTGCCG
TGCCGTGCAGCGGGCGCGCCCCCCTCACGGCTGCTGAGCGTTGCTGCCTC
GCAGCCTGCGCATTTGCACGTGGTGATGCTGCGATGGACTCGCAGGCGCG
CGCATCCTGTCTTCCTCTTTTGAGCAGATTCTGAGTGCAACGACAGGTCT
GCTGTGAGACGCTCTGGGTCAGCAGTTTGGTTGCGGTTAAGGTAATGCTT
CTCGCCCACGTTGCGATGGTGGCGTGGATAATTTTTGTCAGCACAGCTGC
TTATATAGTCATGTTGAAGGTTCAGTTCTCTGTGCAGCTTCCCAGGATCC
AGGTCCCTGCATGCATGATCGTGGACAAAGCACATCAATCACCCGACTCC
CCCCCCCCCCCCCCCCCCCCAGATCGTCCACAACATGTTTGCGGCGCTGG
CGCACGACGTCGGCACCGGCTTCGCGGACGCGCGCCCCCCGCCGCCGCGC
CCCCCCGCCTCACGTAACCGCTTCGCGCACCTCGACAGCCTGTCGGTGTT
TCCGGGCGCGCACTACGGGCCGCCGCCGCTGCCGGATGCTGCTGCTGAGC
ATCACCACCAGCAGCACGGCCTGTTCCTCGAGCCGCTGCTGCAGCTGCGG
GGGTACGCGGGGCCGGGGTCCGAGTGGTCGGGGCCCCTGGGGGGGACGTA
CAGGTGAGGCGTCGTTGTTGAAGTTTGTGCGAAATAGACAGTTGGTGAAT
GGAGTCGTGTGTTGTGCTGGTGAATGGAGCTGTGTGTTGTGCGCGCGCGC
AGCTGTCGACGGGGCGGAAGACTGTGATCGCGGCTGAGGCAGTGCTCATT
GTTTTGTGGTCAGGGTTAGGGTTTCTTGGTTAGGTTTAGGGTTGATGCCA
GGGCTTCATCTCAGGCCACGTGTCTCGGCAGGGTCGACCAGATGACGCCA
AGTAGGGTGAGGGTTACGACCCCCTTGCGACCCCCTTTGGACAGGCGGAA
GAGCTGGTTATCGTGCCTGTGATTTTGATGATGAGCGGGCAGCGCTCAGC
ACGAGTCCACACAGCGCGCATGTAGATCAATGCGTGGGATCGAGCACCTT
CACCCCAGCCCCGATCATGGCGAGCCCAGGCCTCGTCTGGACCGCTGATG
TTGAATACACACAACACACACACGCACACACGACACCCATTGCCGCGAAG
CCATGGCTTACGCTGCTGCTGAGCACTGCGCAGCACGCTGAGCAACGCCA
CTCTGTACTGCATCGCCCCTGTCGCAGGGACAGCTCGCGCGCGCAGGCAG
CGCAGCGCGGCACGCAAGCGGATGCTGCGCAGCGGCAGCGGCCGGCGGCG
ATGGCGGCAGCGGCGGGGGCGGAGGCGGCAGCGGCGCGCTTCGCGGCGGC
GGCGGCGGCGGCGGCGAACGAGGAGGCGTTCAAGCGCGAGCTTGAGGACT
ACACGTGCGCGCTGTGCCTGGACGCGACCGTCGGCGCGCACCTGTGCACA
TGCCGCTGCAACAAGATCTTCTGCGGTGAGTAGGGTAGTGCGGTGCGCTG
CGCCCCCCTCGCTGAGCGCTGATAGTGGTGCGCGCGCATGCCGCCACGGC
GACATCTTATGCGCTTTGTCAGGCGACTCGTTGTCGCCAGTCAAGTTGGC
GGACTGCTTCGGGTTCCCTGGGGTACGCGTTGCTACCGCCAAATGAGTTA
TACCGCAGGGTGTAGCTGAGAGTAGAGGCAATCTGAGCTAGCGTGGGATA
CTATCAGGTACGTTGGCGTGCCTGTCACAGTCTTCTGCACTGAGCCATGC
CTGCATCATTCACACAACGGGCACGATTCAGCGCCATGTCGCTTCGATGC
TCACGAAGTGCGTAGGGCCCGCCAGATCCCACTTTCTGGGGTGTAGACTG
CTGCTGAGCCTCGCTGCAGCCCTCGCCGCTGCTGTCGGCGGCGGCAGCAG
CGCGCCAGTGAAAACCGCCAGGCACTCGCAGTCTCATTCATCGCGCAGCG
ACGCGCGGGCGCACTGCGAGCGATGCGTCGTCAATGCCACTGTGGCTTGC
GCCTGAGCACTGACGATGGCATGCGTACATGACTACATACATGCCCCCCC
CCCCCCCCCCCCCCCCCCCGAGGAGGAAACTAGTGTATCCAGGCACGACT
AGAAATGCAACGCCATGTGCAGTCCCATTCGACGGAAACGATTGTGCGTT
ATGCAGCTAACCGCGCGCGCGTGGACGTGATAGCTAAGCGCTGATCACAA
TGCGCGCCGCGGCGCCGCGCCTGCGCTTGCGTAGAGCCGACTCAGGCCAC
CATAACTGCACAGCTGCGTCGCGCTGTGCATCAGATTCGACTCAGAGTCA
ACTCAGAGTCGACCTGCCTCAGCGCTCCGCGCTTGTGTGGATTCAAGTCT
GCGCGCGCACAGCGCCATCAGGGCTCGCACGGAGGAGTCGACGCGCGCCG
CGCACTACGTATTCGCGCAGCGTCCGCACTTCTGCTGAGTCGACTCATGC
CAGTGCTCACACAGAGTCGCCCTGGCAGCGCGTGCGCACGCGCTGATCAT
TGCCGCCTGACGCCCCCCCCCCTCCCCGTCCCCCCCCCCCCCGTGCGCCG
CCGCTGCCGCTGCCGCCGCTGCACTGCAGGCAAGTGCATCCTAGAGTACC
TCTCGCGCCACGCCGTGCGCCGCGTGCTGCCAGACGGGCGCATGGGCCTC
GCGTGCCCGACGTGCTCGCAGCGCGTCGACTCGGTCAGCGCCTTTCCGCT
CATGGACGCGACGGTGGAGCGCTTTGTGCGCGGCGCGCCGGCGTGCGCGT
CGCGCGACGACTGGTACGCACGCGACGCTCAGTGGCAGCGCCTGCACGCA
ACCGGCTGGCCCGACAAGGTGAGAGAGCTGTGACGTTTGTGTGATGATCT
GTGTAGCTGTGCAAAGGGGGATGCAAACTTCAACTTTGAATTGTTGGGCG
TGCCGGCGTGCGCGTCGCGGCGACGACTGGTACGCGCGCGACGCTCAGTG
GCAGCGCCTGCACGCGAGCGGCTGGCCCGACAAGGTGAGGTGCTCGTCCG
ATCTTCGGCTGGTGAATTGTGTAAACTTCTTTTTTGAAGTGGGGCGCGCC
GGCGTGCGCGTTGCGCGAAACTGTCATGCGCGCGACGCGGCTTGGCGGCG
CCTGCGCGCGAGCGGCTGGCCCGACAAGGTGAGACAAACACTTCAACTGT
GAAGTTGCTTGGTGATCTAGGTAGCTGTTAAGGTCAAACTCTGATGAAAA
CGAATTAAAAGAAATTAGGGTTAAGGCTGGTACGCGCGAGACGCGCAGTG
GCGGCGCCTGCGCGGCTGGCCCGACAAGGTGAGATGGAACTTCAACTGTG
AAGTTGTGTGATGGTTGTTGTGAAGGTCAATACCCTGCTGTGAGGGGTAA
GACTTGCATGCGCGCAACGTGCAGCTGCGCGCGAGCGGCTGGCACGACAA
GGTGAGAGGGGGCGAAATTGGCGGTAAAGTGGTGTGATCTCCAATTCTGA
AGGTCAAAACCCCAATTTTAGGCTTCAGCCTATCAGTGATGAATGACTGC
TTCAAGTGTTGAAAAACCACCCAGGAATGTGTACAAGCTGACCTTGGAGG
GAAAGGGCGTGCACTGACACCGCTGCTCGCTCTTCACGGGCAGCGCCGCA
CGCGCGCGAGGCTCAAACTTCAACTGGGCTACACTTCCTACCCCAGGGTA
GTGCGACTGCCAGAAACAAGTACTTCTTAGGACACAAGTGACCAGAACCA
GGCTGTGCGCTGACACCGCTGCGCTCTTTCTGGCGCGCACTGCAGGCGCG
CGAGGCGGTGGAGCGGCGCGCCGTGCCCACGGACCCCCCCGACCTCAGCG
GCGGCGGCAGCGGCAGCACTGGCGGTGACGGCAGCAGCGCTCATCACCAC
GTCGACAGCGGCGATGTCCCCTTTGCCGCGCGCGCGGACCCCCTCGACGG
CAACCCCGGCCGCGCCTCCGCGGCGAGCACTGCTGCTGCTGCTGCCGCTG
CGCCGAGCGCAGGCGACTCCGCGCCGCGCGCCGCCGCCGCTGCTGCCGCG
CCGGAGTACGGCACAGCGGCGTGGTGGGCGGCGCTGCCGGAGCCGGTGCG
CGCGCACGGCTTGAAGATCTTTTCGCTGTGCGCTTTGGCCACCGTCTTCG
TCTTCATCTCTCGCCACAAGCAGGCGCGGTGACCTGCGCTGCGGCGGCAG
CGGCGGCAGCGGCAGCGGCGGCAGCGGCGGCGGCGGCAGCGGCAGTGGCA
GCGGCAGCTGCAGCGGCGGCGGCAGTAGTGGCGGCGGCGGCAGCGGCGGC
GGCAGCGGCGGCGGCGGCGGTAGCGATGGCGGCAGCGGCGGCGGCAGCGG
CGGCGGCGGCGGTAGCGGTGGCGGCAGCGGCGGCAGCGGCGCGGCAGAAG
CGCGGCATGGCGCTCGGGCGTCGTCAAAGGCGTTCTTGCTGCGTGCACTG
CTGCCTATCATCGCGCTGCTCACGCGCCGGCACACGCCGATGGAACTGCA
GCAGCGCGGCGGTAGTGGCGCAGCGAGTCTACTGGCGGTAGCACGGCTGT
GCAACTGTGGGCATGGCTTCCAGCAGCACGGTGGTGGGGGGCGCTGCGGC
GATCGCGTGCGGCAGCACTGGAAAGGGCGCAGCAGCGTCAGCTCCCGCAA
GCACGGTAGTTGTAGTCGTTATTGCCTGCGCGCTTGGCACATAAGCGTTG
TACATAAACACCCGGGGGCTTCGGTCGTGTAGCGGACGGGGTAGGGGGGT
AGGGGGGGGGAGGGGGGGGGGGGGTCAAGGTGGCATACAGGCATGTTCGC
CACACCATCGGAAGTGAAACGGTTTGTGCTAGTGGTAGGCTAGGGGTGGA
CTTGCGCCAGCTACAAGCTGGCTTGCCGATGCTGCGGTGGTGACAGTGCG
CATCTATGCTCTGCGCACACAGCCGCCATCCGTCAGATGCTGAGCGCTGC
TGCTGCTGCAGTGGCAGTGCTCAGCACTATGAGCGCGGCGCCAGCGCACT
CACACATGCCATGTTTGCGCTGTTTGTTAATGTAACACGTGCAGGTTTCA

Coding sequence (CDS) from alignment at Contig_116:243999..250598+

>mRNA_11286 ID=mRNA_11286|Name=jgi.p|Trimin1|352359|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2136bp|location=Sequence derived from alignment at Contig_116:243999..250598+ (Tribonema minus UTEX_B_3156 )
ATGGCTCTCCGTCGACCTCCGCTCACCAACACGCGCTTTCCGCGCATCAA
TGGAAGCGTGGCCGAGGAGCTGTACCGGCCGATCCAGACTTGGGAGTTGG
ACAATGCGTGGAGAGCGTTCACTCGGCCGGACCCTGAAAACAATGGCGTC
GTGCTGGATTCATCGCTGTTGCCCGGGCAGTCCGCGCCCCCCCCGGGCCT
GGCCGACGGCGAGCTCATATCCAACGACCTCATGGACGTCGTGACGGACC
TCATGAACAACAGACAAGTGCAGGACGCGGTGCTCGGCACGGATATCGTC
CACAACATGTTTGCGGCGCTGGCGCACGACGTCGGCACCGGCTTCGCGGA
CGCGCGCCCCCCGCCGCCGCGCCCCCCCGCCTCACGTAACCGCTTCGCGC
ACCTCGACAGCCTGTCGGTGTTTCCGGGCGCGCACTACGGGCCGCCGCCG
CTGCCGGATGCTGCTGCTGAGCATCACCACCAGCAGCACGGCCTGTTCCT
CGAGCCGCTGCTGCAGCTGCGGGGGTACGCGGGGCCGGGGTCCGAGTGGT
CGGGGCCCCTGGGGGGGACGTACAGGGACAGCTCGCGCGCGCAGGCAGCG
CAGCGCGGCACGCAAGCGGATGCTGCGCAGCGGCAGCGGCCGGCGGCGAT
GGCGGCAGCGGCGGGGGCGGAGGCGGCAGCGGCGCGCTTCGCGGCGGCGG
CGGCGGCGGCGGCGAACGAGGAGGCGTTCAAGCGCGAGCTTGAGGACTAC
ACGTGCGCGCTGTGCCTGGACGCGACCGTCGGCGCGCACCTGTGCACATG
CCGCTGCAACAAGATCTTCTGCGGCGACTCGTTGTCGCCAGTCAAGTTGG
CGGACTGCTTCGGGTTCCCTGGGCCCTCGCCGCTGCTGTCGGCGGCGGCA
GCAGCGCGCCACGCCATCAGGGCTCGCACGGAGGAGTCGACGCGCGCCGC
GCACTACGTATTCGCGCAGCGCAAGTGCATCCTAGAGTACCTCTCGCGCC
ACGCCGTGCGCCGCGTGCTGCCAGACGGGCGCATGGGCCTCGCGTGCCCG
ACGTGCTCGCAGCGCGTCGACTCGGTCAGCGCCTTTCCGCTCATGGACGC
GACGGTGGAGCGCTTTGTGCGCGGCGCGCCGGCGTGCGCGTCGCGCGACG
ACTGGTACGCACGCGACGCTCAGTGGCAGCGCCTGCACGCAACCGGCTGG
CCCGACAAGTGGCAGCGCCTGCACGCGAGCGGCTGGCCCGACAAGGTGAG
GTGCTCGTCCGATCTTCGGCTGGTGAATTGTGTAAACTTCTTTTTTGAAG
TGGGGCGCGCCGGCGTGCGCGTTGCGCGAAACTGTCATGCGCGCGACGCG
GCTTGGCGGCGCCTGCGCGCGAGCGGCTGGCCCGACAAGTGGCGGCGCCT
GCGCGGCTGGCCCGACAAGCTGCGCGCGAGCGGCTGGCACGACAAGGCGC
GCGAGGCGGTGGAGCGGCGCGCCGTGCCCACGGACCCCCCCGACCTCAGC
GGCGGCGGCAGCGGCAGCACTGGCGGTGACGGCAGCAGCGCTCATCACCA
CGTCGACAGCGGCGATGTCCCCTTTGCCGCGCGCGCGGACCCCCTCGACG
GCAACCCCGGCCGCGCCTCCGCGGCGAGCACTGCTGCTGCTGCTGCCGCT
GCGCCGAGCGCAGGCGACTCCGCGCCGCGCGCCGCCGCCGCTGCTGCCGC
GCCGGAGTACGGCACAGCGGCGTGGTGGGCGGCGCTGCCGGAGCCGGTGC
GCGCGCACGGCTTGAAGATCTTTTCGCTCGGCGGCAGCGGCAGCGGCGGC
AGCGGCGGCGGCGGCAGCGGCAGTGGCAGCGGCAGCTGCAGCGGCGGCGG
CAGTAGTGGCGGCGGCGGCAGCGGCGGCGGCAGCGGCGGCGGCGGCGGTA
GCGATGGCGGCAGCGGCGGCGGCAGCGGCGGCGGCGGCGGTAGCGGTGGC
GGCAGCGGCGGCAGCGGCGCGGCAGAAGCGCGGCATGGCGCTCGGGCGTC
GTCAAAGGCGTTCTTGCTGCGTGCACTGCTGCCTATCATCGCGCTGCTCA
CGCGCCGGCACACGCCGATGGAACTGCAGCAGCGCGGCGGTAGTGGCGCA
GCGAGTCTACTGGCGTGGCAGTGCTCAGCACTATGA