mRNA_12008 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|172453
Unique NamemRNA_12008
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|172453 vs. uniprot
Match: A0A835YQF0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF0_9STRA)

HSP 1 Score: 431 bits (1107), Expect = 5.420e-152
Identity = 233/234 (99.57%), Postives = 233/234 (99.57%), Query Frame = 1 
Query:    1 MCALATCAAVQAQWDGGLNPREDEYFGARMRQGQGRNLYQEPAKGPGVLPYLGGILGGFLVDRHLTKRAAKKLAKGYDADRKALEAKLVRIRDDEITKRLKILTNLEVQVQDAELRIEELQQAAVDAGMDLGETQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQRKEDAXXXXXXXXXXXXXXSAQYNINQQRR 702
            MCALATCAAVQAQWDGGLNPREDEYFGARMRQGQGRNLYQEPAKGPGVLPYLGGILGGFLVDRHLTKRAAKKLAKGYDADRKALEAKLVRIRDDEITKRLKILTNLEVQVQDAELRIEELQQAAVDAGMDLGETQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQRKEDAXXXXXXXXXXXXX SAQYNINQQRR
Sbjct:    1 MCALATCAAVQAQWDGGLNPREDEYFGARMRQGQGRNLYQEPAKGPGVLPYLGGILGGFLVDRHLTKRAAKKLAKGYDADRKALEAKLVRIRDDEITKRLKILTNLEVQVQDAELRIEELQQAAVDAGMDLGETQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQRKEDAXXXXXXXXXXXXXGSAQYNINQQRR 234
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BLAST of jgi.p|Trimin1|172453 vs. uniprot
Match: A0A836CPR7_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPR7_9STRA)

HSP 1 Score: 257 bits (657), Expect = 2.560e-83
Identity = 148/232 (63.79%), Postives = 183/232 (78.88%), Query Frame = 1 
Query:   10 LATCAAVQAQWDGGLNPREDEYFGARMRQGQGRN-LYQEPAKGPGVLPYLGGILGGFLVDRHLTKRAAKKLAKGYDADRKALEAKLVRIRDDEITKRLKILTNLEVQVQDAELRIEELQQAAVDAGMDLGETQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQRKEDAXXXXXXXXXXXXXXSAQYNINQQRR 702
            L   A V++QWDGG++PRE+EYF ARMRQ Q +  LYQEP +   +LP +GG++GG+L+D  LT++A +K    ++ D+KAL  +L + R+ E+ K+L  L NLE  V+DAELRIEELQQAAVDAGMD+  TQ EVDY EFKQPDAN+D+RI+RAEF+AYIA+YL+QYPHLRREDMP+FEDFD + DG V FKEWQ YL+RQRKEDAXXXXXXXXXXXXXX      NQ RR
Sbjct:   15 LLALAVVRSQWDGGMDPREEEYFAARMRQPQRQGGLYQEPQRKQSMLPLVGGLVGGWLLDMQLTRKADRKRKLSHEHDKKALAQRLQKHRNAEVNKKLVNLANLEALVEDAELRIEELQQAAVDAGMDISATQAEVDYEEFKQPDANHDNRISRAEFNAYIADYLRQYPHLRREDMPKFEDFDSSRDGSVNFKEWQMYLERQRKEDAXXXXXXXXXXXXXXXXXXXANQYRR 246
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BLAST of jgi.p|Trimin1|172453 vs. uniprot
Match: D7FR63_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR63_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 3.520e-33
Identity = 86/224 (38.39%), Postives = 124/224 (55.36%), Query Frame = 1 
Query:    7 ALATCAAVQAQWDGGLNPREDEYFGARMRQG-QGRNLYQEPAKGPGVLPYLGGILGGFLVDRHLTKRAAKKLAKGYDADRKALEAKLVRIRDDEITKRLKILTNLEVQVQDAELRIEELQQAAVDAGMDLGE-----------------TQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQRKED 624
            +LAT   V    D  +N  EDEYFGARM++  QG  LYQEP +G   L  L G + G  ++   + R+AKK  K  + +  A  A+  + RD  + +R   +  L  +V++A++++ +L  AA DAG+DLG                   Q  ++Y EFKQPD + D+ I++ EF  YI +YL  YP     D+P FEDFD   DG+V F EWQ YLDR +++D
Sbjct:   12 SLATSVMVAGYDDRPMN--EDEYFGARMQEHHQGAGLYQEP-QGSNKLVLLAGAIAGASIEWWWSARSAKKGNKLLEQESAAFIAEWNKERDALMARRTYPIKLLAHEVEEADVQLMQLVAAAEDAGVDLGAGGSGLGGGATRPKARSIQQDNMEYEEFKQPDTDGDNVISKTEFYQYIRKYLSLYPDTAEMDIPHFEDFDLNNDGVVSFDEWQMYLDRHQQQD 232
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BLAST of jgi.p|Trimin1|172453 vs. uniprot
Match: A0A7S2SJ01_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJ01_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.900e-19
Identity = 42/67 (62.69%), Postives = 51/67 (76.12%), Query Frame = 1 
Query:  415 DYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQR 615
            DY EFKQPDAN DD I+RAEFS YI  Y+K YPH+  E+ P FEDFD   DG+V F+EWQ+YL +Q+
Sbjct:  131 DYEEFKQPDANGDDVISRAEFSQYIRNYMKAYPHIAPEEYPTFEDFDVNRDGLVTFQEWQEYLYQQQ 197
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BLAST of jgi.p|Trimin1|172453 vs. uniprot
Match: A0A482SNT9_9ARCH (EF-hand domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SNT9_9ARCH)

HSP 1 Score: 91.7 bits (226), Expect = 2.060e-19
Identity = 41/80 (51.25%), Postives = 56/80 (70.00%), Query Frame = 1 
Query:  388 DLGETQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQRKEDA 627
            +L +   E DY EFK PD NNDD I+RAEF+AY+ +YL  +P L   D P+F+DFD   DG+V F EWQK+L +Q+ ++A
Sbjct:   50 ELEKETVERDYEEFKAPDTNNDDMISRAEFNAYVTKYLSSFPELSEADFPKFDDFDQDEDGLVSFDEWQKFLVQQKLQEA 129
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BLAST of jgi.p|Trimin1|172453 vs. uniprot
Match: A0A7S2VWM5_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VWM5_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 3.600e-16
Identity = 54/159 (33.96%), Postives = 80/159 (50.31%), Query Frame = 1 
Query:  127 AKGPGVLPYLGGILGGFLVDRHLTKRAAKKLAKGYDADRKALEAKLVRIRDDEITKRLKILTNLEVQVQDAELRIEELQQAAVDAGMDLGETQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYL 603
            A G G+  +L   LGGF+V +  + R  + L K +  ++K L            T+    +  ++ Q+ +   + E  +  AV           + DY EFKQPD + DDRI+RAEF+ Y+  YL  YP L  +D PRFEDFD   DG V F E+ + +
Sbjct:   47 AGGGGMRTWLFAGLGGFVVGKLHSGRKVRSLKKQHAKEQKKL-----------YTQYYNDVYKMQEQINEYAYQAEHYKSVAVQVQESAELDAMQRDYDEFKQPDIDGDDRISRAEFNMYVKNYLSNYPGLAEKDYPRFEDFDHDHDGYVSFSEYSQQM 194
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BLAST of jgi.p|Trimin1|172453 vs. uniprot
Match: A0A7S2LGL3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGL3_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.110e-15
Identity = 56/157 (35.67%), Postives = 79/157 (50.32%), Query Frame = 1 
Query:  154 LGGILGGFLVDRHLTKRAAKKLAKGYDADRKALEAKLVRIRDDEITKRLKILTNLEVQVQDAELRI--EELQQAAVDAGMDLGETQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQRK 618
            +GG LG     +  + R   KL K +  ++KAL  +                   ++Q Q+AEL    E+L+  A +          + DY EFKQPD + DDRI+RAEF+ Y+  YL  YP L  +DMP+FEDFD   DG V F E+ + +  Q K
Sbjct:   70 IGGALGWLAGGKFHSNRTKTKLNKKHKKEQKALYTQYYN-------------DVYQLQTQNAELAYLAEQLKTHARNVEEQAELDALQRDYDEFKQPDVDGDDRISRAEFNHYVKNYLSNYPGLTEKDMPKFEDFDHDNDGSVSFSEYAEQMALQTK 213
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BLAST of jgi.p|Trimin1|172453 vs. uniprot
Match: A0A1E7FKY8_9STRA (EF-hand domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKY8_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.590e-15
Identity = 59/190 (31.05%), Postives = 100/190 (52.63%), Query Frame = 1 
Query:   73 YFGARMRQGQGRNLYQEPAKGPGVLPYLG-GILGGFLVDRHLTKRAAKKLAKGYDADRKALEAK----LVRIRDDE--ITKRLKILTNLEVQVQDAELRIEELQQAAVDAGMDLGETQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQRKE 621
            Y+    ++G    +   P  G G +  +  GI    L  +    RA K+L + + +++K L ++    + ++ D    + ++++ LT L VQ  +++  +E LQ+                DY EFKQPD ++DDRI+RAEFS Y+ +YL  YP L  +D P+FEDFD  G+G V F+E+   +  Q ++
Sbjct:   62 YYEYAEKKGDAAAMPGGPGGGAGAMKLVATGITAWVLGAKFHVGRATKELKRKHKSEQKKLYSQYYNDVYKLGDQNSLLQEQIEDLTEL-VQKTESKAELEALQR----------------DYDEFKQPDLDSDDRISRAEFSMYVKDYLSNYPGLTEKDYPKFEDFDHDGNGFVSFEEYSTQMAVQAEQ 234
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BLAST of jgi.p|Trimin1|172453 vs. uniprot
Match: A0A6U3WRH6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3WRH6_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 7.500e-15
Identity = 50/140 (35.71%), Postives = 72/140 (51.43%), Query Frame = 1 
Query:  202 RAAKKLAKGYDADRKALEAKLVRIRDDEITKRLKILTNLEVQVQDAELRIEELQQAAVDAGMDLGETQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQRKE 621
            R AKKL K +  D+K L            T+    +  LE Q  + +L I++L    +D          + +Y EFKQPD + DDRI+R EF  Y+  YL  YP L  +D P+FE+FD   DG V F+E+ + +  Q +E
Sbjct:   38 RVAKKLTKKHKQDQKTL-----------YTQYYNDVYKLEEQKAEQQLIIDQLNNKLLDTSEQHEMENLQREYDEFKQPDIDGDDRISRTEFHMYVKNYLSNYPGLTEKDYPKFEEFDHDKDGYVSFQEYAQQMAVQAQE 166
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BLAST of jgi.p|Trimin1|172453 vs. uniprot
Match: A0A7S3Q1R5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q1R5_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 4.640e-14
Identity = 70/221 (31.67%), Postives = 106/221 (47.96%), Query Frame = 1 
Query:    1 MCALATCAAVQAQWDGGLNPREDEYFGARMRQGQGRNLY----------QEPAKGPGV--LPYLGGILGGFLVDRHLTKRAAKKLAKGYDADRKALEAKLVRIRDDEITKRLKILTNLEVQVQDAELR--IEELQQAAVDAGMDLGETQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQRKE 621
            + AL T A+ Q   D G+ P   ++       GQ  NLY          Q+ A G G+  +   GG+ G     ++ + +A K L K +  + K L ++      +++ K         +Q Q+AEL   +++LQ        +      + DY EFKQPD + DDRI+RAEF  Y+  YL  YP L  +D PRFE+FD   DG V F E+ + +  Q K+
Sbjct:   14 LAALLTLASAQ---DYGMQPDYTDFADG----GQEDNLYADYAMKQAEKQDGASGGGMVKMAIFGGV-GWVAGAKYHSAKATKNLKKKHMKEAKTLYSQYY----NDVYK---------LQEQNAELAEAVKKLQGMLNSVESEREMEVMQRDYDEFKQPDVDGDDRISRAEFQMYVKNYLANYPGLTEKDYPRFEEFDHDHDGYVSFTEYSQQMALQAKK 213
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|172453 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A835YQF0_9STRA5.420e-15299.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CPR7_9STRA2.560e-8363.79EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
D7FR63_ECTSI3.520e-3338.39EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
A0A7S2SJ01_9STRA1.900e-1962.69Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A482SNT9_9ARCH2.060e-1951.25EF-hand domain-containing protein n=1 Tax=archaeon... [more]
A0A7S2VWM5_9STRA3.600e-1633.96Hypothetical protein n=1 Tax=Triparma pacifica Tax... [more]
A0A7S2LGL3_9STRA1.110e-1535.67Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A1E7FKY8_9STRA2.590e-1531.05EF-hand domain-containing protein n=1 Tax=Fragilar... [more]
A0A6U3WRH6_9STRA7.500e-1535.71Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S3Q1R5_9STRA4.640e-1431.67Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_93contigContig_93:11219..15749 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|172453|e_gw1.93.60.1
DescriptionEF-hand domain pair
COG categoryZ
Max annot lvl2759|Eukaryota
EggNOG OGs2E463@1|root,2SB4A@2759|Eukaryota
Evalue5.78e-34
Seed ortholog2880.D7FR63
Hectar predicted targeting categoryother localisation
TranscriptId172775
TrackFilteredModels1
ProteinId172453
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|172453gene_12008Tribonema minus UTEX_B_3156 geneContig_93 11219..15749 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|172453Trimin1|172453|e_gw1.93.60.1Tribonema minus UTEX_B_3156 polypeptideContig_93 11219..15749 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12008_1exon_12008_1Tribonema minus UTEX_B_3156 exonContig_93 11219..11352 +
exon_12008_2exon_12008_2Tribonema minus UTEX_B_3156 exonContig_93 12072..12183 +
exon_12008_3exon_12008_3Tribonema minus UTEX_B_3156 exonContig_93 13333..13491 +
exon_12008_4exon_12008_4Tribonema minus UTEX_B_3156 exonContig_93 14179..14369 +
exon_12008_5exon_12008_5Tribonema minus UTEX_B_3156 exonContig_93 15641..15749 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12008CDS_12008Tribonema minus UTEX_B_3156 CDSContig_93 11219..11352 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12008 ID=mRNA_12008|Name=jgi.p|Trimin1|172453|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=705bp|location=Sequence derived from alignment at Contig_93:11219..15749+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTGTGCATTGGCGACGTGCGCTGCGGTCCAGGCGCAGTGGGATGGAGG
CTTGAATCCGAGGGAGGACGAGTATTTTGGGGCGCGCATGCGGCAGGGGC
AGGGGCGCAACTTGTACCAGGAGCCAGCCAAGGGGCCTGGCGTGCTGCCG
TACCTGGGCGGGATCCTGGGTGGCTTTCTGGTGGACCGGCACCTGACAAA
GAGGGCGGCGAAGAAGCTCGCAAAGGGATACGATGCGGACCGCAAGGCAC
TGGAGGCAAAGCTGGTGAGAATACGCGACGACGAGATAACCAAGCGCCTC
AAGATCCTCACCAACCTGGAGGTGCAGGTGCAGGACGCGGAGCTGCGCAT
TGAGGAGCTGCAGCAGGCGGCGGTGGATGCCGGTATGGACCTGGGCGAGA
CGCAGACGGAGGTGGACTACGCAGAGTTCAAGCAGCCTGACGCCAACAAC
GACGACAGGATCACGCGCGCCGAGTTCAGCGCGTACATTGCAGAGTACCT
CAAGCAGTACCCGCACCTGCGCCGTGAGGACATGCCGCGCTTTGAGGACT
TTGACTTCACGGGCGACGGCATCGTGGAATTCAAAGAGTGGCAAAAGTAC
CTCGACAGGCAGCGCAAGGAGGACGCGGCGGCGGCGGCGGCGGAGGCGAA
GAAGCAGGCGGCGGGTGGCAGTGCTCAGTATAACATCAACCAGCAGCGTC
GTTAA
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protein sequence of jgi.p|Trimin1|172453

>Trimin1|172453|e_gw1.93.60.1 ID=Trimin1|172453|e_gw1.93.60.1|Name=jgi.p|Trimin1|172453|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=235bp
MCALATCAAVQAQWDGGLNPREDEYFGARMRQGQGRNLYQEPAKGPGVLP
YLGGILGGFLVDRHLTKRAAKKLAKGYDADRKALEAKLVRIRDDEITKRL
KILTNLEVQVQDAELRIEELQQAAVDAGMDLGETQTEVDYAEFKQPDANN
DDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKY
LDRQRKEDAAAAAAEAKKQAAGGSAQYNINQQRR*
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mRNA from alignment at Contig_93:11219..15749+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12008 ID=mRNA_12008|Name=jgi.p|Trimin1|172453|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4531bp|location=Sequence derived from alignment at Contig_93:11219..15749+ (Tribonema minus UTEX_B_3156 )
ATGTGTGCATTGGCGACGTGCGCTGCGGTCCAGGCGCAGTGGGATGGAGG
CTTGAATCCGAGGGAGGACGAGTATTTTGGGGCGCGCATGCGGCAGGGGC
AGGGGCGCAACTTGTACCAGGAGCCAGCCAAGGGGTGAGGCTCTCCACGT
GTCATGAGACCACAGCGTCTTTTCGCTTATGATGTCATGAGTGCACACTT
AATACGAATGTGCAGCAGGTCTCACACCATAGCATCTCATTTCGTCGGCT
GAAATCATCAAAAATCACGTCTACGAGGTGTAACACTTCTGCTGCACAAG
TTGAAGTTCCATCAAATCTTAACGCCGTGCTTGTAGTCCTGCCTTTACCA
GCAGCAAAACACTCCACATGTATTTATGGGGGCAAATGAACGGCAGAACG
GTGGGCAAAGAACCCTCATCGGGCAAGCAGGCCTGCTTGTGGCAGCTCGG
CGCGCGGTGACCGTGAGGAGGGCAGTCGCTGCGTGCGCGCTGAGTGTCTG
GCCTAGGGTTCGGGCCAATCCTGCTGCTGCCACGCAGCCACTGCGTGTTG
CCGAAACAGTTGCAGAAGGAGGTGATCATGTCTGAACGCGTCTACTTGGA
AGTGCTTGCAAGTGTGCCCTTGCTGCTGTGCCGATTGCGGGCAATCGAAT
TGCCATTGCACGTGCGGCTCTCAGGCACAGCGATACCCATTGCCTCCTAC
GACACCCTAGCACGATGCGGTCAATATTTCAAGTGCGCAAATCCCCCCCA
CCCTTTTTTTCGCTTTCATTATCAACTATCAATGAGTAAGTAGTGCACTG
CTTCTGTGCTGAGCGCTGTGCGTTCATTACGTGCTGAGCATCGCTGACTC
CAGGCCTGGCGTGCTGCCGTACCTGGGCGGGATCCTGGGTGGCTTTCTGG
TGGACCGGCACCTGACAAAGAGGGCGGCGAAGAAGCTCGCAAAGGGATAC
GATGCGGACCGCAAGGTGACGCAACTGCGATATTCGATGCTTCAAGAAGT
ACTTGTTTATGTAGGGTTAACAAAACCACAAGATTAGCTAGGTTTAACAA
ATCCATAAGAGGGCAGCTAACGAGTGCTTGCTGAGAACTGACACATGGGG
GCACCAAAATCAGCAACTGCTTGAGTCGCAAAGGGATATGATGCGGGTCG
CAAGATGACGCTTCTGCCATATTTGAAACTTCAAGAAGTTCTCTTTTATT
TACGGGGAAATTAAAACCACAAGAAGGCAACGAACAAGTGCTCGCCAAGC
ACTGACACGTGGGGGCACCAAAATCAACAGTTACTTGAGTTGAACTCAAT
GACATGCGGCAATACCTGCCAACTGGCGGCTGTAGATACTTCAAGGGACA
CCTTAAAGCAACTGCTTTTCAAGCATTACAAACTCTGTACTGCCGGTGTG
CCAAGTGAAGCTATATCAGCACATCTCTTTGTTCAAGCTCTCAAAGACCG
TATGGGCGGGATGCGTGAACCGACTCTAACCCCAACCCCCCCCTAACCCT
AACCCTATAGCTGAAACAGCAGGGCTTGTCAGCGGCTGAAGGTGATCGGA
GACCATCCCGGCAGTTCTGCAGGTGCACGTCACACTGACGCCCTTGACGC
TGTCATCGACCGCGTACTCATGCGGTCCCGACGCAACTGTCAACTTCAAC
TTCAATCGTTGACATAGATGGATTGCAGAACGCCAGTGGCATATGTACGC
AGCACATGCCCCTACAGGCGCCGGCGTAGGCATGATTGTCATGCCCACGC
AAGCACAAAGCGCCGCAGCGCTGCGCACTTCTGACTGCAGCGCTCAGCGC
CGCTCAGCGCGTAACACCGCAGCAGTGCTCAATGCCAAATTGTGACAGCG
ACGCTCACCGCGCCCTGGCCGCATCTTTCGACAGCAGTCCTCTGTGCAAA
CTTATTGACAACTCATGCGCCAAGCCTGGCGCTCGCTGCGTACTCGCGAC
AACTATGGTCAGGTGAGGTCTGGGGTTAGCATGAGGGTTAGGGTTAACGC
GCGACTTGCGCTCAACTCAGGCTAATAGTGAAAAACCCCATCAAAGCCTT
GTAAAAGCCATGGCGGTCATACGCCCCCCGCGTGACTCGTGCCCTCTCGC
GCGTGCACCCGCAGGCACTGGAGGCAAAGCTGGTGAGAATACGCGACGAC
GAGATAACCAAGCGCCTCAAGATCCTCACCAACCTGGAGGTGCAGGTGCA
GGACGCGGAGCTGCGCATTGAGGAGCTGCAGCAGGCGGCGGTGGATGCCG
GTATGGACCTGGGCGAGACGCAGGTCAGCGCTCAGCATTAGGGCTAGGGT
TAGGGCCAGAGCTGGGGGGGGTTAGGTTTAGGGTTAGGGCTAGGAATAGG
ATCAGGCTTAAAGTTAGGGTTAGGGCCAGGATGAGGGGTCAAGATCCTTG
ACTCTTAAGGTGCAAGACCAATGCGGCCGCGCACAGGCAATGCTCGGCAC
CGGCGCAGCGCAGTACCTGAGAGAACGCGGGCCGCGACATTAACGTACTT
CAACGATGACAGGATCACGGCGTGCAGTCCATAATCATGAAAACATAGAT
AAATGGTCAACGTGTACTGTTCTACCGAGGTGGACCATGCGGGGTTCAGA
TTGGACCATGCAAAGTTCAACGGTAAAGTTATGAACTCATGACTGTTTAC
GTGTACTGCACAGACGGAGGTGGACTACGCAGAGTTCAAGCAGCCCGACG
CCAACAACGATGACAGGATCACTCGCGCCTAGTTTGCAATATTGAAGTTA
TCAACTCACGATCCACGTGTACTGCTCAAACGAAGGTGGACTATGTGCGA
GTTCAGCAACGATGTTCTGAACTCATGACCGTCCATGTGTACTGTTCACA
GACGGAGGTGGACTACGCAGAGTTCAAGCAGCCGGACGCCAACAATGACG
ACAGGATCACTCTCACAATCATGATCTCATGAACGTCTGATGCGTGTGTA
CTGTTCACAGACGGAGGTGGACTACGCAGAGTTCAAGCAGCCTGACGCCA
ACAACGACGACAGGATCACGCGCGCCGAGTTCAGCGCGTACATTGCAGAG
TACCTCAAGCAGTACCCGCACCTGCGCCGTGAGGACATGCCGCGCTTTGA
GGACTTTGACTTCACGGGCGACGGCATCGTGGAATTCAAAGAGTGGCAAA
AGTGAGATACGCATGCACACACAATACTTTGAAAGTGAATTCACAGACGC
CATGTGCTTGAAAGCACACATGTGCGCGGAGTTCAAAGAGTGGGAAAAGG
CTCATGTTTGCACATGTAGCATTTGCGGAATGCCTCAAGTGTACCCGCAC
CTGTGCCGCGAGGACATGCCAGCATTGAGGACTTTGACTTCACGGGCGAC
GGCATTGTGGAATTCAAAGAGTGGCAAAAGTAAGTAGAGTACACATGTAT
TTTTCGAAGTGTCACAAAGATTATGCAGGCTAAAGTGGCAAAATGGGACA
TATATGCACTAGTCTATACATAGCCATAGTAACTGAATGATTACATTATA
GACACGCGCCGCGCTTTGAGGACTTTGACTTCACGGGCGACGGCATTGTG
GAATTCAAAGAGCGGCAAAAGTGAGACACGCATACGCACATACATGTTCA
TTACTTCAGAGTATTCCTCGCCGTCACAGTACCCCAAGTGCATGAAGTTC
AGAGAGACAAAACGGACATATACATGATGCGCGCATGTACTTCAACTTGA
AGTACCATACTTCAAGTATGACATCTACGCCCTCGCGTCGCCGCGCGTGG
CATCGCCGCTTTGTCTGCGCGACAGGTGCTGGTTAACAAAGTTGCCGCGA
CAGTAGCAACCGTTCCAAAACGTGAACACTACCTTCTGACCCGACCTCAT
TTTCAGAGGCATTCCCATGCACAGAACAAGGCCCTTCGGTCGAACCTAGC
TCGTGCTAGCAAGACATAACCGCCGTTCAAGTCCTCCCAGAGGCGTTCCC
ATGCTAATTCTAATCCTAACCCCAACACCTTGTCAACGAGGGTTAGGAAG
GCACCTCCGTCGCACTCAGCCGGTGCGAGCAAGACAAACCCGCCGTTCAC
GTCCCTTACGGCCTCTACTGAGCACTGATGGTTTCAGCCTTGTCACTGCA
TGAAGAAGCTGCAGCATTCTGCTTGGTACTAGCCGCAACGCCAAGCGCCG
CCTGTTTAGCGCTGAAAGTTCTCAACCGGAAGTACATGGACAACTTGGCG
GCGGCGTCGTTTGAGTGGTTGTCATCGAGACACTTTCAGACTGTCACACG
ACTTGTAGATTCCGTACTGCAAGCTTCAAGTTAGATACCATTCATCGGGC
GTTTTCGCGCCCTGAGCGACAATCAATAAATAATACACAGACAGACACCT
ACTTGCGCACTTAGCAGCCGTTGCCAGTGTCCACCGAACACTGATGGTTT
CACATGTACTTCGGCGGTGCAGGTACCTCGACAGGCAGCGCAAGGAGGAC
GCGGCGGCGGCGGCGGCGGAGGCGAAGAAGCAGGCGGCGGGTGGCAGTGC
TCAGTATAACATCAACCAGCAGCGTCGTTAA
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Coding sequence (CDS) from alignment at Contig_93:11219..15749+

>mRNA_12008 ID=mRNA_12008|Name=jgi.p|Trimin1|172453|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=705bp|location=Sequence derived from alignment at Contig_93:11219..15749+ (Tribonema minus UTEX_B_3156 )
ATGTGTGCATTGGCGACGTGCGCTGCGGTCCAGGCGCAGTGGGATGGAGG
CTTGAATCCGAGGGAGGACGAGTATTTTGGGGCGCGCATGCGGCAGGGGC
AGGGGCGCAACTTGTACCAGGAGCCAGCCAAGGGGCCTGGCGTGCTGCCG
TACCTGGGCGGGATCCTGGGTGGCTTTCTGGTGGACCGGCACCTGACAAA
GAGGGCGGCGAAGAAGCTCGCAAAGGGATACGATGCGGACCGCAAGGCAC
TGGAGGCAAAGCTGGTGAGAATACGCGACGACGAGATAACCAAGCGCCTC
AAGATCCTCACCAACCTGGAGGTGCAGGTGCAGGACGCGGAGCTGCGCAT
TGAGGAGCTGCAGCAGGCGGCGGTGGATGCCGGTATGGACCTGGGCGAGA
CGCAGACGGAGGTGGACTACGCAGAGTTCAAGCAGCCTGACGCCAACAAC
GACGACAGGATCACGCGCGCCGAGTTCAGCGCGTACATTGCAGAGTACCT
CAAGCAGTACCCGCACCTGCGCCGTGAGGACATGCCGCGCTTTGAGGACT
TTGACTTCACGGGCGACGGCATCGTGGAATTCAAAGAGTGGCAAAAGTAC
CTCGACAGGCAGCGCAAGGAGGACGCGGCGGCGGCGGCGGCGGAGGCGAA
GAAGCAGGCGGCGGGTGGCAGTGCTCAGTATAACATCAACCAGCAGCGTC
GTTAA
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