Trimin1|351438|estExt_Genemark1.C_Ctg_900054 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|351438
Unique Name	Trimin1\|351438\|estExt_Genemark1.C_Ctg_900054
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	247

Homology

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BLAST of jgi.p|Trimin1|351438 vs. uniprot
Match: A0A836C746_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C746_9STRA)

HSP 1 Score: 322 bits (824), Expect = 1.660e-108
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0

Query:    1 MESLQELATLATATLQKDNKREKDNAAHHRGSHDASPAGAAQNKRLLLKKSASDWHVWLTIEDRTEIRRKIASAYRDACRADFEQLLETAAAIEEEWLFASAPSRLDYFKTGVQYDKRVTEKIEQLRGARLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKAANLNAANAXVXXXXXXXXXXXXXXXXXXXXXKRXXXXXSGSDVVKREAAAAVPNGADAPPLPPAKKQRKAESAA 246
            MESLQELATLATATLQKDNKREKDNAAHHRGSHDASPAGAAQNKRLLLKKSASDWHVWLTIEDRTEIRRKIASAYRDACRADFEQLLETAAAIEEEWLFASAPSRLDYFKTGVQYDKRVTEKIEQLRGARLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKAANLNAANAXVXXXXXXXXXXXXXXXXXXXXXKRXXXXXSGSDVVKREAAAAVPNGADAPPLPPAKKQRKAESAA
Sbjct:    1 MESLQELATLATATLQKDNKREKDNAAHHRGSHDASPAGAAQNKRLLLKKSASDWHVWLTIEDRTEIRRKIASAYRDACRADFEQLLETAAAIEEEWLFASAPSRLDYFKTGVQYDKRVTEKIEQLRGARLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKAANLNAANAXVXXXXXXXXXXXXXXXXXXXXXKRXXXXXSGSDVVKREAAAAVPNGADAPPLPPAKKQRKAESAA 246

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BLAST of jgi.p|Trimin1|351438 vs. uniprot
Match: A0A7S2FJZ2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FJZ2_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 2.350e-20
Identity = 45/75 (60.00%), Postives = 57/75 (76.00%), Query Frame = 0

Query:   54 DWHVWLTIEDRTEIRRKIASAYRDACRADFEQLLETAAAIEEEWLFASAPSRLDYFKTGVQYDKRVTEKIEQLRG 128
            DWH++LTIE+R  +R+KI  AY  +C++ +E LLET  AIEEE L  S PSRLDYFK+G QYD+RV EK +QL G
Sbjct:   55 DWHLFLTIEERQAVRKKIKQAYTSSCKS-YEDLLETVVAIEEELLHISTPSRLDYFKSGCQYDRRVVEKRKQLEG 128

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BLAST of jgi.p|Trimin1|351438 vs. uniprot
Match: A0A7S2DF57_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DF57_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 5.560e-20
Identity = 45/75 (60.00%), Postives = 59/75 (78.67%), Query Frame = 0

Query:   54 DWHVWLTIEDRTEIRRKIASAYRDACRADFEQLLETAAAIEEEWLFASAPSRLDYFKTGVQYDKRVTEKIEQLRG 128
            DWH++LTIE+R  +R+KI  AY+ +C  +++ LLET  AIEEE L  SAPSRLDYFK+G+Q+DKRV+EK  QL G
Sbjct:   76 DWHLFLTIEERQAVRQKIKQAYQGSC-PNYQDLLETVVAIEEELLHISAPSRLDYFKSGIQFDKRVSEKRNQLAG 149

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BLAST of jgi.p|Trimin1|351438 vs. uniprot
Match: A0A6S9GEG3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GEG3_HETAK)

HSP 1 Score: 92.8 bits (229), Expect = 1.380e-19
Identity = 47/83 (56.63%), Postives = 62/83 (74.70%), Query Frame = 0

Query:   44 KRLLLKKSASDWHVWLTIEDRTEIRRKIASAYRDACRADFEQLLETAAAIEEEWLFASAPSRLDYFKTGVQYDKRVTEKIEQL 126
            +R L ++ + DWH+ LTIE+R  IR K+ +AYR AC  D+  LLE AAAIEEE LFA+APSRLDYF++G+ Y KRV +K + L
Sbjct:   52 QRQLTQQPSMDWHLCLTIEERQAIRDKVQAAYRAAC-PDYASLLEVAAAIEEEALFATAPSRLDYFRSGILYSKRVADKQKAL 133

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BLAST of jgi.p|Trimin1|351438 vs. uniprot
Match: A0A812THD1_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812THD1_SYMMI)

HSP 1 Score: 86.7 bits (213), Expect = 6.650e-18
Identity = 42/75 (56.00%), Postives = 57/75 (76.00%), Query Frame = 0

Query:   54 DWHVWLTIEDRTEIRRKIASAYRDACRADFEQLLETAAAIEEEWLFASAPSRLDYFKTGVQYDKRVTEKIEQLRG 128
            DW ++LT+E+R  IR+KI++ Y    +  +E+LL+  +AIEEE +F SAPSRLDYFKTG+Q+DKRVTEK  Q  G
Sbjct:    2 DWRLFLTVEERQMIRQKISAGYEGRAKT-YEELLKICSAIEEELVFISAPSRLDYFKTGLQFDKRVTEKQRQFMG 75

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BLAST of jgi.p|Trimin1|351438 vs. uniprot
Match: A0A8J2SPE0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SPE0_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.870e-17
Identity = 41/79 (51.90%), Postives = 57/79 (72.15%), Query Frame = 0

Query:   54 DWHVWLTIEDRTEIRRKIASAYRDACRADFEQLLETAAAIEEEWLFASAPSRLDYFKTGVQYDKRVTEKIEQLRGARLG 132
            +W  +LT+E+RT +R K+ +AY D C+  +E+LL+T  AIEEE L  +APSRLDYFK GVQ+D+RV +K +QL     G
Sbjct:   52 EWRRFLTVEERTGVRSKLRAAYADQCKT-YEELLDTVTAIEEELLHMAAPSRLDYFKAGVQFDRRVADKRKQLAAPAAG 129

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BLAST of jgi.p|Trimin1|351438 vs. uniprot
Match: A0A485L9A2_9STRA (Aste57867_17765 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9A2_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 8.840e-17
Identity = 45/94 (47.87%), Postives = 62/94 (65.96%), Query Frame = 0

Query:   35 ASPAGAAQNKRLLLKKSASDWHVWLTIEDRTEIRRKIASAYRDACRADFEQLLETAAAIEEEWLFASAPSRLDYFKTGVQYDKRVTEKIEQLRG 128
            AS +GA       +   A DW ++LTIE+R  +R KI  AY   C+  +E+LL+ A+AIEEE L  +APSRLDYFK+G +++ RV  K EQL+G
Sbjct:  179 ASSSGARPQGNAAVAAPAQDWRMYLTIEERQAVRAKIHDAYTSTCKT-YEELLQAASAIEEELLHIAAPSRLDYFKSGFEFENRVKLKREQLQG 271

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BLAST of jgi.p|Trimin1|351438 vs. uniprot
Match: T0PZW9_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0PZW9_SAPDV)

HSP 1 Score: 85.9 bits (211), Expect = 2.100e-16
Identity = 45/95 (47.37%), Postives = 62/95 (65.26%), Query Frame = 0

Query:   37 PAGAAQNKRLLLKKSA---SDWHVWLTIEDRTEIRRKIASAYRDACRADFEQLLETAAAIEEEWLFASAPSRLDYFKTGVQYDKRVTEKIEQLRG 128
            P+ AA ++  L   S     DW  +LTIE+R  +R KI  AY   C+  +E+LL+ A+AIEEE L  +APSRLDYFK+G +++ RV  K EQL+G
Sbjct:  117 PSAAAPSRSQLTSSSGPPPQDWRTYLTIEERQAVRSKIQDAYTSTCKT-YEELLQAASAIEEELLHIAAPSRLDYFKSGFEFENRVKLKREQLQG 210

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BLAST of jgi.p|Trimin1|351438 vs. uniprot
Match: W4H676_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H676_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 3.140e-16
Identity = 45/94 (47.87%), Postives = 63/94 (67.02%), Query Frame = 0

Query:   35 ASPAGAAQNKRLLLKKSASDWHVWLTIEDRTEIRRKIASAYRDACRADFEQLLETAAAIEEEWLFASAPSRLDYFKTGVQYDKRVTEKIEQLRG 128
            +S A AA +  +     A+DW ++LTIE+R  +R KI  AY   C+  +E+LL  A+AIEEE L  +APSRLDYFK+G +++ RV  K EQL+G
Sbjct:  189 SSSASAAPHVAVSTTVPAADWRMYLTIEERQAVRSKIQDAYTSTCKT-YEELLHAASAIEEELLHIAAPSRLDYFKSGFEFENRVKLKREQLQG 281

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BLAST of jgi.p|Trimin1|351438 vs. uniprot
Match: A0A3R6YU30_9STRA (DDE_Tnp_1_7 domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6YU30_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 3.480e-16
Identity = 46/94 (48.94%), Postives = 63/94 (67.02%), Query Frame = 0

Query:   35 ASPAGAAQNKRLLLKKSASDWHVWLTIEDRTEIRRKIASAYRDACRADFEQLLETAAAIEEEWLFASAPSRLDYFKTGVQYDKRVTEKIEQLRG 128
            +S A AA +  L     A+DW ++LTIE+R  +R KI  AY   C+  +E+LL  A+AIEEE L  +APSRLDYFK+G +++ RV  K EQL+G
Sbjct:  422 SSSASAAPHVALSTTVPAADWRMYLTIEERQAVRSKIQDAYTSTCKT-YEELLHAASAIEEELLHIAAPSRLDYFKSGFEFENRVKLKREQLQG 514

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351438 vs. uniprot

BLAST of jgi.p|Trimin1|351438 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836C746_9STRA	1.660e-108	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S2FJZ2_9STRA	2.350e-20	60.00	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A7S2DF57_9STRA	5.560e-20	60.00	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A6S9GEG3_HETAK	1.380e-19	56.63	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A812THD1_SYMMI	6.650e-18	56.00	Hypothetical protein n=1 Tax=Symbiodinium microadr...	[more]
A0A8J2SPE0_9STRA	2.870e-17	51.90	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
A0A485L9A2_9STRA	8.840e-17	47.87	Aste57867_17765 protein n=1 Tax=Aphanomyces stella...	[more]
T0PZW9_SAPDV	2.100e-16	47.37	Uncharacterized protein n=2 Tax=Saprolegnia TaxID=...	[more]
W4H676_9STRA	3.140e-16	47.87	Uncharacterized protein n=6 Tax=Aphanomyces astaci...	[more]
A0A3R6YU30_9STRA	3.480e-16	48.94	DDE_Tnp_1_7 domain-containing protein n=3 Tax=Apha...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 76..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..196

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_90	contig	Contig_90:440302..442144 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351438	mRNA_11451	Tribonema minus UTEX_B_3156	mRNA	Contig_90 439693..442144 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|351438|estExt_Genemark1.C_Ctg_900054 ID=Trimin1|351438|estExt_Genemark1.C_Ctg_900054|Name=jgi.p|Trimin1|351438|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=247bp
MESLQELATLATATLQKDNKREKDNAAHHRGSHDASPAGAAQNKRLLLKK
SASDWHVWLTIEDRTEIRRKIASAYRDACRADFEQLLETAAAIEEEWLFA
SAPSRLDYFKTGVQYDKRVTEKIEQLRGARLGRSGGGGGGDGGDGSVSNE
RGSTAAAAAAASSSGTANSSKAANLNAANAAVNGDSASSGSDGSGRTGGS
GGGKRGGGSGSGSDVVKREAAAAVPNGADAPPLPPAKKQRKAESAA*