Trimin1|347215|estExt_Genemark1.C_Ctg_90072 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347215
Unique NameTrimin1|347215|estExt_Genemark1.C_Ctg_90072
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length465
Homology
BLAST of jgi.p|Trimin1|347215 vs. uniprot
Match: A0A835YR36_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR36_9STRA)

HSP 1 Score: 560 bits (1444), Expect = 8.500e-196
Identity = 464/464 (100.00%), Postives = 464/464 (100.00%), Query Frame = 0
Query:    1 MDTLQEYVDPGSSDEDRKDSSKLVSYEDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDREMAGLVIPPXXXLPVGXXXXXXXXXXXIALEGMIEMEKGPMQPPSERETLDAPSFPNFAFGGGGRXXXXXXXXXXXXXXXXXXXXRGPPQADWTCDCGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAFSSGAMAQIHAVTQPQRFPSIAVPAHAALLTPPLLLRVPASSLPPRCRLRHAKEQAALVRXXXXXXXXXXXXXHSARAXXXXXXXXXXSAFGGGLMGGASGLDPAANSXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKRPRGNGEQASGRDRERERDLDXXXXXXXXXXXXXXXYXXXXXXXXXRSGGDXRGDRDAEHRDGGRGGRDRREXXXXXXXXXXAYRR 464
            MDTLQEYVDPGSSDEDRKDSSKLVSYEDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDREMAGLVIPPXXXLPVGXXXXXXXXXXXIALEGMIEMEKGPMQPPSERETLDAPSFPNFAFGGGGRXXXXXXXXXXXXXXXXXXXXRGPPQADWTCDCGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAFSSGAMAQIHAVTQPQRFPSIAVPAHAALLTPPLLLRVPASSLPPRCRLRHAKEQAALVRXXXXXXXXXXXXXHSARAXXXXXXXXXXSAFGGGLMGGASGLDPAANSXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKRPRGNGEQASGRDRERERDLDXXXXXXXXXXXXXXXYXXXXXXXXXRSGGDXRGDRDAEHRDGGRGGRDRREXXXXXXXXXXAYRR
Sbjct:    1 MDTLQEYVDPGSSDEDRKDSSKLVSYEDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDREMAGLVIPPXXXLPVGXXXXXXXXXXXIALEGMIEMEKGPMQPPSERETLDAPSFPNFAFGGGGRXXXXXXXXXXXXXXXXXXXXRGPPQADWTCDCGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAFSSGAMAQIHAVTQPQRFPSIAVPAHAALLTPPLLLRVPASSLPPRCRLRHAKEQAALVRXXXXXXXXXXXXXHSARAXXXXXXXXXXSAFGGGLMGGASGLDPAANSXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKRPRGNGEQASGRDRERERDLDXXXXXXXXXXXXXXXYXXXXXXXXXRSGGDXRGDRDAEHRDGGRGGRDRREXXXXXXXXXXAYRR 464          
BLAST of jgi.p|Trimin1|347215 vs. uniprot
Match: D7FZ07_ECTSI (RanBP2-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ07_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 1.170e-26
Identity = 63/104 (60.58%), Postives = 72/104 (69.23%), Query Frame = 0
Query:  146 RGPP----QADWTCD-CGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAFSSG 244
            RGP     + DWTC  CGNVNW  R  CN C   KP  L   DE R+GLGGGFNERQDRAS+ATVEV EDG+DDFGRK  KA+AD++  E AAL RL ++F  G
Sbjct:   75 RGPAGLFKKGDWTCTACGNVNWERRATCNKCNNPKP-NLAATDEAREGLGGGFNERQDRASVATVEVDEDGFDDFGRKKIKARADKKAKEDAALARLRKSFGGG 177          
BLAST of jgi.p|Trimin1|347215 vs. uniprot
Match: G4Z0Q3_PHYSP (RanBP2-type domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z0Q3_PHYSP)

HSP 1 Score: 120 bits (302), Expect = 3.410e-26
Identity = 60/103 (58.25%), Postives = 75/103 (72.82%), Query Frame = 0
Query:  146 RGPP----QADWTCD-CGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAFSS 243
            RGPP      DWTC+ CGNVNW  R ECN+C+++KP  + G DE RDG GGGFNERQ+R + A +EVGEDGYDDFG + KK KA +   E AAL RL+Q++S+
Sbjct:  250 RGPPGLFQPGDWTCNTCGNVNWERRNECNMCKSAKPG-MAGLDEKRDGAGGGFNERQERVASAKMEVGEDGYDDFGMRKKKVKASKAEREAAALARLQQSYSA 351          
BLAST of jgi.p|Trimin1|347215 vs. uniprot
Match: A0A7S2CIC2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CIC2_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.200e-25
Identity = 55/92 (59.78%), Postives = 64/92 (69.57%), Query Frame = 0
Query:  151 ADWTCD-CGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAF 241
            ADW C  CGNVNW  R  CN+C   KP  L  PD+ R+GLGGGF ERQ++ASL+TVEV EDGYDDFGRKIK    D+   E AAL RL  ++
Sbjct:   36 ADWDCPGCGNVNWARRSTCNMCNTKKP-DLADPDDAREGLGGGFLERQEQASLSTVEVAEDGYDDFGRKIKSKNKDKAAKEAAALARLTASY 126          
BLAST of jgi.p|Trimin1|347215 vs. uniprot
Match: A0A7S2WNS0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WNS0_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.440e-25
Identity = 58/102 (56.86%), Postives = 72/102 (70.59%), Query Frame = 0
Query:  146 RGPP----QADWTCD-CGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAFS 242
            RGPP    +ADW C+ CGNVNW  R  CN+C  +KP+T  GPDE RDGLGGGF ERQ+RAS   VEV +DG+DDFGRK K+  +++   E AAL RL  +F+
Sbjct:   31 RGPPGLFVKADWDCNGCGNVNWARRSHCNMCGQAKPST-AGPDEQRDGLGGGFLERQERASSTQVEVADDGFDDFGRKAKQRASNKSAKEAAALARLNASFT 131          
BLAST of jgi.p|Trimin1|347215 vs. uniprot
Match: A0A8K1CMJ3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMJ3_PYTOL)

HSP 1 Score: 113 bits (283), Expect = 3.200e-25
Identity = 59/102 (57.84%), Postives = 70/102 (68.63%), Query Frame = 0
Query:  147 GPP----QADWTC-DCGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAFSS 243
            GPP      DW C  CGNVNW  R ECN+C+ SKP  + G DE RDG+GGGFNERQ+R + A  EV EDGYDDFG K KK KA +   E AAL RL+Q++S+
Sbjct:   64 GPPGLFKAGDWACLTCGNVNWERRNECNICKGSKPG-MSGLDEKRDGIGGGFNERQERVASAKKEVDEDGYDDFGVKKKKVKASKAEREAAALARLKQSYSA 164          
BLAST of jgi.p|Trimin1|347215 vs. uniprot
Match: F0WQ51_9STRA (2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WQ51_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.960e-24
Identity = 59/103 (57.28%), Postives = 72/103 (69.90%), Query Frame = 0
Query:  146 RGPP----QADWTCD-CGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAFSS 243
            RGPP      DWTC  CGNVNW  RQECN+C+ +KP  + G DE RDG+ GGFNERQ+R + A  E+GEDGYDDFG K KK  A +   E AAL RL+Q++S+
Sbjct:   66 RGPPGLFKPGDWTCTVCGNVNWERRQECNICKNAKPG-MPGVDERRDGVAGGFNERQERVASAKAEIGEDGYDDFGMKKKKINASKTQREAAALARLQQSYSA 167          
BLAST of jgi.p|Trimin1|347215 vs. uniprot
Match: A0A024GHB5_9STRA (2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GHB5_9STRA)

HSP 1 Score: 116 bits (291), Expect = 3.670e-24
Identity = 58/103 (56.31%), Postives = 73/103 (70.87%), Query Frame = 0
Query:  146 RGPP----QADWTCD-CGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAFSS 243
            RGPP      DWTC  CGNVNW  RQECN+C+ +KP  + G DE RDG+ GGFNERQ+R + A  E+GEDGYDDFG + KK  A +   E+AAL RL+Q++S+
Sbjct:   69 RGPPGLFKPGDWTCTVCGNVNWERRQECNICKNAKPG-MPGADERRDGVAGGFNERQERVASAKAEIGEDGYDDFGMRKKKLNASKTQREVAALARLQQSYSA 170          
BLAST of jgi.p|Trimin1|347215 vs. uniprot
Match: A0A4D9D5Z5_9STRA (RanBP2-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5Z5_9STRA)

HSP 1 Score: 108 bits (270), Expect = 7.680e-24
Identity = 56/102 (54.90%), Postives = 70/102 (68.63%), Query Frame = 0
Query:  146 RGPP----QADWTC-DCGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLA-TVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAF 241
            +GPP     +DW C  CGNVNW  R+ CN+C   KP TL G  E R+GLGGGF ERQ+R +++  VEVGEDG+DDFGRK  K K DR+  E+AAL RL+  +
Sbjct:   99 KGPPGLFKASDWNCPSCGNVNWERREFCNMCGGKKP-TLAGSGEAREGLGGGFLERQERGAISQAVEVGEDGFDDFGRKKAKEKVDRKAKEMAALARLKATY 199          
BLAST of jgi.p|Trimin1|347215 vs. uniprot
Match: H3HB99_PHYRM (RanBP2-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HB99_PHYRM)

HSP 1 Score: 105 bits (263), Expect = 4.290e-21
Identity = 58/125 (46.40%), Postives = 74/125 (59.20%), Query Frame = 0
Query:  146 RGPP----QADWTCD-CGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRK---------------------IKKAKADRRVLELAALNRLEQAFSSG 244
            RGPP      DWTC+ CGNVNW  R ECN+C++SKP  + G DE RDG GGGFNERQ+RA+ A  E+ +DGYDDFG +                     ++K KA +   E AAL RL+Q++  G
Sbjct:  305 RGPPGLFQPGDWTCNTCGNVNWERRNECNMCKSSKPG-MSGLDEKRDGAGGGFNERQERAASAKAEIDDDGYDDFGMRKKVQDLQRTILDKELTELLYLLQKVKASKAEREAAALARLQQSYRCG 428          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347215 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A835YR36_9STRA8.500e-196100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FZ07_ECTSI1.170e-2660.58RanBP2-type domain-containing protein n=2 Tax=Ecto... [more]
G4Z0Q3_PHYSP3.410e-2658.25RanBP2-type domain-containing protein n=1 Tax=Phyt... [more]
A0A7S2CIC2_9STRA1.200e-2559.78Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2WNS0_9STRA1.440e-2556.86Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8K1CMJ3_PYTOL3.200e-2557.84Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0WQ51_9STRA2.960e-2457.282-(3-amino-3-carboxypropyl)histidine synthase subu... [more]
A0A024GHB5_9STRA3.670e-2456.312-(3-amino-3-carboxypropyl)histidine synthase subu... [more]
A0A4D9D5Z5_9STRA7.680e-2454.90RanBP2-type domain-containing protein n=1 Tax=Nann... [more]
H3HB99_PHYRM4.290e-2146.40RanBP2-type domain-containing protein n=1 Tax=Phyt... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D4.10.1060.10coord: 147..178
e-value: 2.2E-7
score: 32.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 372..464
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 353..464
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..88
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 140..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_9contigContig_9:776984..780379 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347215mRNA_3569Tribonema minus UTEX_B_3156 mRNAContig_9 776984..780379 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347215|estExt_Genemark1.C_Ctg_90072 ID=Trimin1|347215|estExt_Genemark1.C_Ctg_90072|Name=jgi.p|Trimin1|347215|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=465bp
MDTLQEYVDPGSSDEDRKDSSKLVSYEDDDDKEDQYDPADAAPADEAPPA
AAAAPEEEDREMAGLVIPPPPPLPVGRGRGRGRGGGGIALEGMIEMEKGP
MQPPSERETLDAPSFPNFAFGGGGRGGRGRGGGRGGGRGGRGGGGRGPPQ
ADWTCDCGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRA
SLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAFSSGAMAQIH
AVTQPQRFPSIAVPAHAALLTPPLLLRVPASSLPPRCRLRHAKEQAALVR
LQCAKEQAALARLHSARAKEQAALARLQSAFGGGLMGGASGLDPAANSSS
SAAAALGQFDDAAPAAASNNDEDDPPSKRPRGNGEQASGRDRERERDLDR
SRDRERDRDRDRDRYRDRDRDGDRRSGGDRRGDRDAEHRDGGRGGRDRRE
RERERDRDRDAYRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036443Znf_RanBP2_sf