mRNA_12829 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|351402 vs. uniprot
Match: A0A835YJU6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU6_9STRA) HSP 1 Score: 961 bits (2484), Expect = 0.000e+0 Identity = 595/595 (100.00%), Postives = 595/595 (100.00%), Query Frame = 1 Query: 1 MSLVRFLCQMLTLCPAVATAXXXXXXXLLSLHVDGVALAKRSRSASGVAALRTVXXXXXXXXXXXXXXXXXXXXXXXSDRXXXSVLHVQLDDMRPRARFPVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXVPPAIPFVCIQYEREVATLGMPHFKSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTDSAVLDKIAAAKQALRHTLTAPARHDHSLVYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAAGGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAEGGGDTRVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPRSAQPGCPLAVLTRDMMAANLRIV 1785 MSLVRFLCQMLTLCPAVATAXXXXXXXLLSLHVDGVALAKRSRSASGVAALRTVXXXXXXXXXXXXXXXXXXXXXXXSDRXXXSVLHVQLDDMRPRARFPVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXVPPAIPFVCIQYEREVATLGMPHFKSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTDSAVLDKIAAAKQALRHTLTAPARHDHSLVYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAAGGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAEGGGDTRVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPRSAQPGCPLAVLTRDMMAANLRIV Sbjct: 1 MSLVRFLCQMLTLCPAVATAXXXXXXXLLSLHVDGVALAKRSRSASGVAALRTVXXXXXXXXXXXXXXXXXXXXXXXSDRXXXSVLHVQLDDMRPRARFPVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXVPPAIPFVCIQYEREVATLGMPHFKSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTDSAVLDKIAAAKQALRHTLTAPARHDHSLVYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAAGGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAEGGGDTRVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPRSAQPGCPLAVLTRDMMAANLRIV 595
BLAST of jgi.p|Trimin1|351402 vs. uniprot
Match: D7G2C7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C7_ECTSI) HSP 1 Score: 366 bits (940), Expect = 9.880e-107 Identity = 231/506 (45.65%), Postives = 295/506 (58.30%), Query Frame = 1 Query: 253 VLHVQLDDMRPRARFPVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXVPPAIPFVCIQYEREVATLGMPHFKSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTDSAVLDKIAA--AKQALRHTLTAPARHDHSLVYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAA-GGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAE--------GGGDTRVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPRSAQPGCP 1737 V HVQ+DDMR R R PVV+QP DSG+NSH+R A+PFV + +++EVATLGMPH KS ++ LQ+ VD++FVLH+L++ ++PE T VL K+ AK +RHT+ PA+ D S+VY+E FRH+ I V++EL+VGQ ALS DAAA EDP+ GGL VLGG FL+ + VLG ++A ++PTFVFDEL+VTHY GSA L + L QQ VAQGYK VVGSMELLGDPL+LV KL DSV+QF T+AE G+ T GAGA++LV G+VGG FGSAAKI GSLE +IRGLSGT +A+ E G V+ L+HG ++GG+ V Y++++ GI+GL+DRP EGAKEEG+AGF+ GMAKG AVS+VTEGVDASTR +RMGRRR R+A P Sbjct: 931 VFHVQVDDMRRRTRMPVVLQPADSGFNSHLREAREGGAGGNRG------AVPFVRLLWDKEVATLGMPHLKSLDLELQEMRANVDLEFVLHLLALTGSLVPELTSEEVLAKMCRKKAKVTVRHTVPTPAKRDLSMVYVEAFRHSTIVVRVELWVGQAALSP---------------------DAAAL--------------------EDPETTTGGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSAGGLTGLVVTALTQQAVAQGYK---------------------------VVGSMELLGDPLSLVGKLGDSVVQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREEDGQLQREVKGLEHGVKQGGK--------VFYETMKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXAVSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVP 1354
BLAST of jgi.p|Trimin1|351402 vs. uniprot
Match: A0A6H5KWU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU7_9PHAE) HSP 1 Score: 346 bits (888), Expect = 1.410e-98 Identity = 228/533 (42.78%), Postives = 293/533 (54.97%), Query Frame = 1 Query: 253 VLHVQLDDMRPRARFPVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXVPPAIPFVCIQYEREVATLGMPHFKSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTDSAVLDKIAA--AKQALRHTLTAPARHDHSLVYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAA-GGLAVLGGSFLSAVGVLGG---------------------------TLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAE--------GGGDTRVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPRSAQPGCP 1737 V HVQ+DDMR R R PVV+QP DSG+NSH+R A+PFV + +++EVATLGMPH KS ++ LQ+ VD++FVLH+L++ ++PE T VL K+ AK +RHT+ PA+ D S+VY+E FRH+ I V++EL+VGQ ALS DAAA EDP+ GGL VLGG FL+ + VLG ++A ++PTFVFDEL+VTHY GSA L + L QQ VAQGYK VVGSMELLGDPL+LV KL DSV+QF T+AE G+ T GAGA++LV G+VGG FGSAAKI GSLE +IRGLSGT +A+ E G V+ L+ G ++GG+ + Y++++ GI+GL+DRP EGAKEEG+AGF+ GMAKG VS+VTEGVDASTR +RMGRRR R+A P Sbjct: 2565 VFHVQVDDMRRRTRMPVVLQPADSGFNSHLRDAREGGAGGNRG------AVPFVRLLWDKEVATLGMPHLKSLDLELQEMRANVDLEFVLHLLALTGSLVPELTSEEVLAKMCRKKAKVTVRHTVPTPAKRDLSMVYVEAFRHSTIVVRVELWVGQAALSP---------------------DAAAL--------------------EDPETTTGGLTVLGGGFLTVLSVLGSRRVPCSLIVIALACRCSWVTILWAETLSIAHVNPTFVFDELVVTHYCGSAGGLTGLVVTALTQQAVAQGYK---------------------------VVGSMELLGDPLSLVGKLGDSVVQFFTKTKAEMTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEQGVKQGGK--------IFYETMKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVP 3015
BLAST of jgi.p|Trimin1|351402 vs. uniprot
Match: A0A7S2GN42_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN42_9STRA) HSP 1 Score: 266 bits (681), Expect = 8.000e-77 Identity = 184/499 (36.87%), Postives = 263/499 (52.71%), Query Frame = 1 Query: 232 SDRXXXSVLHVQLDDMRPRARFPVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXVPPAIPFVCIQYEREVAT-LGMPHFKSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTDSAVLDK--IAAAKQALRHTLTAPARHDHSLVYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAAGGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAEGGGDTRVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPRS 1719 SD SV HVQ+DDMRP A+ PVV QPVDSG+NS +R +PF+ +ER+ A+ M H KS +V +QQ ++D+DFVL + S+A R + + ++S +++ + +A+ A++H + AP + L+Y+E H+ I VQLE+ VG R L+ + LA+++ G+ ++G S S + VLG +LA I+PTF F+EL + FG +LA+++ LV+QGVAQGYK VVGSMELLGDP++LV+ + V QF R T A+ GE T G G + L GVVGG FGS AKI G+ + ++ ++G D R H+ G G + ++ + +GI+G+V RP+EGA++ GV GFL G+ KG+V AVAAPVAGA GAVS VTE VDA+ +Y MGRRR RS Sbjct: 86 SDMTIFSVYHVQVDDMRPNAKLPVVFQPVDSGWNSGLRSDSLRD-------------VPFLQCSFERDPASGHDMLHLKSLQVIVQQMQTKLDIDFVLQVASLAARSVRQLSESDAMEQASLTSARHAIQHRIKAPHYTNSGLIYIETLYHSSIVVQLEVMVGSRNLNTDD-----------------------------------------LADDEQR---GVWLMGSSLWSMLVVLGSSLAHINPTFQFNELKLADSFGQRWDLASSIFMSLVKQGVAQGYK---------------------------VVGSMELLGDPVSLVSNMGVGVYQFFRKTGADMLGESETRGEGVKHLFQGVVGGTFGSVAKITGAADTLLSAVTGQNERDNW----QRPEHVGQGIVIGSER--------VWRGVTEGITGIVVRPIEGAQQNGVPGFLFGLGKGVVGAVAAPVAGAFGAVSAVTESVDANLKYWDERPMGRRRNTRS 488
BLAST of jgi.p|Trimin1|351402 vs. uniprot
Match: A0A7R9UEM8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEM8_9STRA) HSP 1 Score: 223 bits (567), Expect = 5.870e-57 Identity = 185/553 (33.45%), Postives = 254/553 (45.93%), Query Frame = 1 Query: 232 SDRXXXSVLHVQLDDMRPRARFPVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXVPPAIPFVCIQYEREVATLGMPHFKSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTDS----------------AVLDKIAAAKQALRHTLTA-------------------------------PARHDHS-LVYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAAGGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLS-----GTEVADAEGGGDTRVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKE-EGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPRSAQP 1728 SDR SV H+Q+DD+R +ARFPVV++PVD+G+NSH+R + +PF+ + YEREV + HFK E L + V VDV ++ ++ + + D + LD +A +Q+ R + P H S L+Y+E H PI +QLE+ I D +A + LD AA L+ + ++ED A LA+LG L A+ L T A SP FVF E V ++FG ++L L GLV QGVAQ SYK+ GSME+LGDPLAL NK+ + ++QF R T AE RGE G G R L GVVGGA SA+KI+G+LE++I GL V A+G + RH+ G GG+ V+ S+ +G+ GL D P + EGVAGF+ G+ KG+ V +PVAG LGA VT VDA+ L +G+RR R P Sbjct: 1847 SDRTELSVFHMQIDDLRRKARFPVVLRPVDTGFNSHLRGSNGKATEL----------LPFLRVMYEREVTATKIQHFKMIEGVLGRVQVHVDVRPMISLVRFFVKCVSRPADGDESDAQDTNGARYKSFSELDDASAQEQSNRDSFRGGADATARRGQAERISGPALKGCLLILKDRIEPLGHVSSGLIYVEHLHHGPIVLQLEILAN-----------IGDQNAIAT-----SLDPAANP----------LSLDSPFSSEDETA---LALLGNQVLGALTALVSTFAHASPIFVFGECEVDNFFGQRKDLVRTLTLGLVHQGVAQ---------------------------SYKLFGSMEVLGDPLALANKVGEGMVQFFRATGAELRGESDFKGEGLRRLAQGVVGGAAQSASKISGTLEEMISGLGLGQLGPNHVLAADGTIMKKPRHIGEGVVEGGK--------VMITSLTRGVLGLYDHPRLAIENAEGVAGFVGGVGKGLAGLVVSPVAGVLGAFRTVTASVDATLHLWDLVPLGQRRPRRVLAP 2325
BLAST of jgi.p|Trimin1|351402 vs. uniprot
Match: D8LB75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB75_ECTSI) HSP 1 Score: 161 bits (407), Expect = 7.230e-37 Identity = 150/515 (29.13%), Postives = 237/515 (46.02%), Query Frame = 1 Query: 250 SVLHVQLDDMRPRARFPVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXVPPAIPFVCIQYEREVATLGMPHF---KSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTDSAVLDK----IAAAKQALRHTLTAPARHDHSL--VYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAAGGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAEGGGDTRV-RHLKHGFQRGGQXXXXXXXXVLY--DSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPRSAQPGCPLAVLTRD 1758 SV H QLDDMR + P+++ P +G+NSH+ + P ++ ER+V H +S E+ L + V VDF + + + L +T+S+ + IA + + + L APA D ++ +Y+ + I V ++ ++G + +L ++ D D E+ D F +LA L +GG + G +A SPTF FD + HY+GS + + V+QGV Q +YKV+G +++LGDPL+L +S V+ F+ T A GE G++ LV GVVGG SA+K+ +L++ +R + G T+ HL G +G ++Y +++ GI+G+V +P+ GA++ G AGF+ G+ +G+V VAAPV+ ALGA SK+T G+DA+TR E MGRRREPR PL + RD Sbjct: 2429 SVWHFQLDDMRADSPHPIILAPQCTGFNSHLTKVHYNGLSGS----------PAFRVEVERDVEVSLTHHMWVIRSIEMCLGKVHCAVHVDFWIDVQDVVFASL-NWTNSSPAEARARAIADTQGVVGNLLQAPAA-DATVDRIYIGEYFQEEIEVAVDFHLGTKVAALLSSKPPADGD--------EEKDEGG--------------FGASLAMMP------LGAVGGVVWGLLSSFGAGIANASPTFNFDAYELEHYYGSKTQAVTLVVMSFVKQGVVQ---------------------------AYKVLGHIDILGDPLSLGMNISSGVIGFVTKTGAGHIGE------GSKDLVKGVVGGTASSASKMTDALDNFVREAGCMDAEAPSGMESTKAPEHLGQGLTQG----------MMYFGHTVKDGITGVVMKPVRGARKNGAAGFVKGVGQGVVGLVAAPVSAALGATSKITAGIDATTRLLDDEPMGRRREPRH-----PLGLGERD 2855
BLAST of jgi.p|Trimin1|351402 vs. uniprot
Match: W7U3K2_9STRA (Ph domain containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3K2_9STRA) HSP 1 Score: 155 bits (391), Expect = 7.110e-35 Identity = 159/583 (27.27%), Postives = 249/583 (42.71%), Query Frame = 1 Query: 235 DRXXXSVLHVQLDDMRPRARFPVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXV-----------PPA-----------IPFVCIQYEREVAT--LGMPHFKSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTDSA-----------------------------VLDK--IAAAKQALRHTLTAPARH-----DHSLVYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAAGGLAVLGGSFLSAVGVLGGTLARISP-TFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADA----------------------EGGGDTR---------VRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRR 1707 DR ++ H+QLDDMRP A F V++QP DSG+++ RR P A +P V + E E+ T + HF+ E+++Q+ +RVD+D + +++ R L F ++D+ I+ ++ LR + P LVY+E+F H+ + V +EL G P+ ++ A ++ L +D SL ++ L D GL ++G + + + +LA++S T VF+ELL THYFGS +L + L QQ + Q SYK++G+M+LLG+PL L V++F R TQAE G+ + G G R L V+GG F S +KI G++ ++ + G A E GG + +HL G +GG+ V Y S++ G+ + D P +GA EG +GFL GM KG+V A+AAP+ G LG +S+VT+ +T Y + R+ RRR Sbjct: 3707 DRAQLALYHIQLDDMRPGATFAVIIQPADSGWHTPARRSKKLKAAAMAMSVSSTGTCTEQQTERPAAAKEDEHVFSNLVPLVRVTAEPELHTPWSEVVHFRGLELSVQELEMRVDLDTLFSLVAYIGR-LSRFDSEREERAATAGDIYHHYYNQHRDPSMRSLRTNIMDEKSISLVRRLLRSKVRVPDAALSEAVGQRLVYIELFHHSSLIVGMELVPGGGNF-----PSRKER-AKQTGLPGNRMDG-------------SLGLDQEL---DEALVSGLELIGTGVVQLLADMARSLAQLSGLTLVFNELLFTHYFGSHYDLGHIVVLSLRQQAITQ---------------------------SYKLLGAMDLLGNPLNLFLGFGSGVVEFFRRTQAELVGDADSKGEGLRRLAKAVIGGPFSSVSKITGTVASLLEEVVGVREMAAMAEEGMRDELSSSTARAIGHQTEDGGSSADGWRGRAPPPQHLGEGILKGGE--------VFYKSVKSGVKNIYDLPQQGASREGFSGFLKGMGKGVVGALAAPLIGTLGGISRVTD----TTAYFEKPRILRRR 4227
BLAST of jgi.p|Trimin1|351402 vs. uniprot
Match: A0A6H5KB17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB17_9PHAE) HSP 1 Score: 126 bits (316), Expect = 7.150e-26 Identity = 138/516 (26.74%), Postives = 226/516 (43.80%), Query Frame = 1 Query: 250 SVLHVQLDDMRPRARFPVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXVPPAIPFVCIQYEREVATLGMPHF---KSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTDSAVLDK----IAAAKQALRHTLTAPARHDHSL--VYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAAGGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAEGGGDTRV--RHLKHGFQRGGQXXXXXXXXVLY--DSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPRSAQPGCPLAVLTRD 1758 SV H QLDDMR + P+++ P +G+NSH+ + P ++ ER+V H +S ++ L + V VDF + + A+ +T+S+ + IA + + + L APA D ++ +Y+ + I V ++ ++G + +L ++ D D E+ D F +LA L +GG + G +A SPTF FD + HY+GS + + V+QGV Q +YKV+G +++LGDPL+L +S V+ F+ T A GE G++ LV GVVGG SA+K+ +L++ +R +G A+A G +++ HL G +G ++Y +++ GI+G+V +P+ GA++ G AGF+ SK+T G+DA+TR + MGRRREPR PL + RD Sbjct: 1335 SVWHFQLDDMRADSPHPIILAPQCTGFNSHLTKVHYNGLSGS----------PAFRVEVERDVEVSLTHHMWVIRSIKMCLGKVHCAVHVDFWIDDVVFASL---NWTNSSPAEARARAIADTQGVVGNLLQAPAA-DATVDRIYIGEYFQEEIEVAVDFHLGTKVAALLSSKPSADGD--------EEKDEGG--------------FGASLAMMP------LGAVGGVVWGLLSSFGAGIANASPTFNFDAYELEHYYGSKTQAVTQVVMSFVKQGVVQ---------------------------AYKVLGHIDILGDPLSLGMNISSGVIGFVTKTGAGHIGE------GSKDLVKGVVGGTASSASKMTDALDNFVR-EAGCMDAEAPSGMESKKAPEHLGQGLTQG----------MMYFGHTVKDGITGVVMKPVRGARKGGAAGFVKXXXXXXXXXXXXXXXXXXXXXSKITAGIDATTRLLDDDPMGRRREPRH-----PLGLGERD 1759
BLAST of jgi.p|Trimin1|351402 vs. uniprot
Match: A0A2D4C0V0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0V0_PYTIN) HSP 1 Score: 125 bits (313), Expect = 2.010e-25 Identity = 131/503 (26.04%), Postives = 208/503 (41.35%), Query Frame = 1 Query: 250 SVLHVQLDDMRPRARFPVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXVPPAIPFVCIQYEREVATLGMPHFKSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTDSAVLDKIAAAKQ-ALRHTLTAPAR--HDHSLVYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAAGGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAEGGGDTRVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERM-GRRREPR--SAQPGCPL 1740 SV H+Q+DDM P A +PVV+ P+DSG+NS R + PFV + + + G+ + F+V L VR+++++V +L++ LP + + K L + LT P + + SL+Y + + + L D+AA+ H G ++LG S +G + G +A ++P F FDE++ + F +L A+ +V V Q YK +VGS+ELLGDP+ L + D R + + +G+ G A LV VVG S K++ L DV++ + E + + RH+ G +GG VL S+ G+ G + P+ GAK++GV GF G+ +G + VA+P G LG V K++ V+ +T + G RR PR SA P PL Sbjct: 1426 SVHHMQIDDMTPNALYPVVLAPIDSGFNSDKRE----------GWLPMDGERPFVTVTFATAPPS-GITVVEEFDVDLNSSVVRLNLEYVFRLLNLIYEFLPTSDEDTQIQYGVDQKDWLLTNELTIPEQIGYGGSLMYFKKWSLSAFEFHLVF------------------------------DSAAEEHG----------------------DGISSILG----STIGSIVGGIAHVTPEFQFDEIVYENRFFYQYDLIYAVVWDIVLSVVGQWYK---------------------------IVGSVELLGDPVGLATDIVDGFALAARQLKRDVKGKSLRKGESALTLVQTVVGAPMKSIGKVSNGLGDVLKKATDFESQEEA----NQPRHVPEGLLQGG--------VVLTKSLAYGVKGFIKEPVRGAKKDGVVGFAKGVGRGTLQLVASPFVGTLGVVEKISMSVNNTTHLLDEKSYDGPRRPPRDLSASPLKPL 1822
BLAST of jgi.p|Trimin1|351402 vs. uniprot
Match: A0A812L9G9_9DINO (Vps13A protein (Fragment) n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812L9G9_9DINO) HSP 1 Score: 115 bits (289), Expect = 5.640e-23 Identity = 146/525 (27.81%), Postives = 214/525 (40.76%), Query Frame = 1 Query: 253 VLHVQLDDMRPRARF-PVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXVPPAIPFVCIQYEREVATLGMPHFKSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTD---------SAVLDKIAAAKQA-------LRHTLTAPARHDHSLVYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKI--SLTFN------KTLANEDPDAAGGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAEGGGDTRVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTR-YRQLERMGRRREPRSAQPGCPLAVL 1749 V H Q+D+MR + P+++ P DSGY H RR+ IPFV E+ + G+ HFK + LQ VR+D+ F + + + L E+ S+ D+ AKQ + ++ RH VY E FR + Q+E+ + ++ L+ A ++ A SM ED + AQ + +I LT K L + +G LS VG ++P F F E + +L R V+ G+ Q +KV+ S+ LLGDP+ L ++ V++F R T +E + G G L GVVGG +A K G+L D + L+ T GGD R RH + G V GI+GLV P++G + +GV G TGM KG +G + V V EGVDA+TR + E++ RRREPR G L L Sbjct: 162 VHHFQIDNMREADKLRPIIVCPEDSGY--HSDRRERLHKHKGRKGSTDSETIPFVYFCMEKLPS--GILHFKELTLLLQPVIVRLDLVFWVKV----GQQLFEWATVDSGSANAGSSAEDREIVAKQVFLLREGGIEVPSSSTTRHP---VYFEYFRLGALIAQVEILMPMKSKLLKKRQA--NSGVASSMFEDEDDEQDAQMLQSMWLSQILARLTHRSHGLVKKVLMVAQKGLLFVVTSVGSGVLSGVG-------HMTPRFAFPETVFQRTLEDLMPFLYSLVRDYVKTGMYQ---------------------------FWKVLFSINLLGDPVGLTTSVTGGVMKFFRKTGSEVIAGDLK-GEGLLSLAQGVVGGTAATAGKFFGALGDTVDALAQT-------GGD-RDRHYQPGSVNHVGDGLTAGAQVFLHGATSGIAGLVQAPVQGFQRKGVVGLATGMLKGXXXXXXXXXSGLMHGVQHVAEGVDATTRLWDHAEQIVRRREPRGLPSGAKLVPL 630 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351402 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12829 ID=mRNA_12829|Name=jgi.p|Trimin1|351402|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2329bp|location=Sequence derived from alignment at Contig_89:534243..544583+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAGCCTGGTGCGCTTCCTCTGCCAGATGCTCACCCTGTGCCCCGCTGTback to top protein sequence of jgi.p|Trimin1|351402 >Trimin1|351402|estExt_Genemark1.C_Ctg_890056 ID=Trimin1|351402|estExt_Genemark1.C_Ctg_890056|Name=jgi.p|Trimin1|351402|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=677bp MSLVRFLCQMLTLCPAVATAAAAAAAALLSLHVDGVALAKRSRSASGVAAback to top mRNA from alignment at Contig_89:534243..544583+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12829 ID=mRNA_12829|Name=jgi.p|Trimin1|351402|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=10341bp|location=Sequence derived from alignment at Contig_89:534243..544583+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_89:534243..544583+ >mRNA_12829 ID=mRNA_12829|Name=jgi.p|Trimin1|351402|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2031bp|location=Sequence derived from alignment at Contig_89:534243..544583+ (Tribonema minus UTEX_B_3156 )back to top |