mRNA_11288 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|174668 vs. uniprot
Match: A0A835ZIP5_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIP5_9STRA) HSP 1 Score: 838 bits (2164), Expect = 2.500e-306 Identity = 435/435 (100.00%), Postives = 435/435 (100.00%), Query Frame = 1 Query: 1 LAVIAPPLIAMARLSFALARPYLPLVILALAALNVLPPRESVAAAAVLATALIALDEQLRLAVTGRHDSGIKAGLYTSGAAGKKEVIKRVPALRAPFYRGTPWMWSGDLLTLLPYVLFGHASVRYERRWLMVPEAFGPNSRATHLQDAIAHDNDNGTDASRQLALALDIAVPEAGHDPAKPFYIVLHGLNGSSAEPYLLDFVRGALGRGSSAAVLIARGLGGTPCADALFHGARVSDVDAAVNVLRRALGPATPLALVGFSIGGIIASNYLGVVGARTPLNAAVSLAGSFDTRANMSHAHSRRAWQPLLAIELKRRFVAPNAARMAARGVDPGGAAARARDVVDFDSDVVAPYHGYKDVYAYYEDMSAGCNGKHLSVAAPLLAVQALDDPIMCPAGLPIADVDKNDNLWLLVTQKGGHIGWAEVSIVNDVIAWNA 1305 LAVIAPPLIAMARLSFALARPYLPLVILALAALNVLPPRESVAAAAVLATALIALDEQLRLAVTGRHDSGIKAGLYTSGAAGKKEVIKRVPALRAPFYRGTPWMWSGDLLTLLPYVLFGHASVRYERRWLMVPEAFGPNSRATHLQDAIAHDNDNGTDASRQLALALDIAVPEAGHDPAKPFYIVLHGLNGSSAEPYLLDFVRGALGRGSSAAVLIARGLGGTPCADALFHGARVSDVDAAVNVLRRALGPATPLALVGFSIGGIIASNYLGVVGARTPLNAAVSLAGSFDTRANMSHAHSRRAWQPLLAIELKRRFVAPNAARMAARGVDPGGAAARARDVVDFDSDVVAPYHGYKDVYAYYEDMSAGCNGKHLSVAAPLLAVQALDDPIMCPAGLPIADVDKNDNLWLLVTQKGGHIGWAEVSIVNDVIAWNA Sbjct: 1 LAVIAPPLIAMARLSFALARPYLPLVILALAALNVLPPRESVAAAAVLATALIALDEQLRLAVTGRHDSGIKAGLYTSGAAGKKEVIKRVPALRAPFYRGTPWMWSGDLLTLLPYVLFGHASVRYERRWLMVPEAFGPNSRATHLQDAIAHDNDNGTDASRQLALALDIAVPEAGHDPAKPFYIVLHGLNGSSAEPYLLDFVRGALGRGSSAAVLIARGLGGTPCADALFHGARVSDVDAAVNVLRRALGPATPLALVGFSIGGIIASNYLGVVGARTPLNAAVSLAGSFDTRANMSHAHSRRAWQPLLAIELKRRFVAPNAARMAARGVDPGGAAARARDVVDFDSDVVAPYHGYKDVYAYYEDMSAGCNGKHLSVAAPLLAVQALDDPIMCPAGLPIADVDKNDNLWLLVTQKGGHIGWAEVSIVNDVIAWNA 435
BLAST of jgi.p|Trimin1|174668 vs. uniprot
Match: A0A6H5J9X5_9PHAE (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J9X5_9PHAE) HSP 1 Score: 302 bits (774), Expect = 5.600e-94 Identity = 176/403 (43.67%), Postives = 236/403 (58.56%), Query Frame = 1 Query: 205 SGIKAGLYTSGAAGKKEVIKRVPALRAPFYRGTPWMWSGDLLTLLPYVLFGHAS-----VRYERRWLMVPEAFGPNSRATHLQDA-----------IAHD-------------------------NDNGT--------DASRQLALALDIAVPEAGHDPAKPFYIVLHGLNGSSAEPYLLDFVRGALGRGSSAAVLIARGLGGTPC-ADALFHGARVSDVDAAVNVLRRALGPATPLALVGFSIGGIIASNYLGVVGARTPLNAAVSLAGSFDTRANMSHAHSRRAWQPLLAIELKRRFVAPNAARMAARGVDPGGAAARARDVVDFDSDVVAPYHGYKDVYAYYEDMSAGCNGKHLSVAAPLLAVQALDDPIMCPAGLPIADVDKNDNLWLLVTQKGGHIGW 1263 S ++ GL+ A +I V AL+ P Y+GTPW+ GDL TL P++ F + V+Y RRWL V +A + T Q+ + HD N +GT D + A+ALDIA+P+ G DP+KPFY+VLHGL G SAEPY+LDFV ALGRG V+I+RG GTP D FHGAR+SDV + V LRR+L TPL +VG+S+GGIIA+NY + G + ++ VS++GSFDTR N+ HS++ WQPLLA+ LK FV N + RG++ A ++V+D D+ +VAPY+GY DV AYY DMSA +GK + P LAV +LDDPIM G PIA+VD NL++L+T+ GGH+GW Sbjct: 115 SHLRPGLHCGRTARTDAIISMVTALQHPHYKGTPWIIGGDLATLYPFLAFRSFAFHVPVVKYARRWLSV-DADDTRTNGTKAQEVGGGNGTNGGIGVNHDSPDSLDGFTTCGGTPSAPGAVPSAANGHGTGGDGKGLDDGDNKEAVALDIALPDTGLDPSKPFYLVLHGLTGGSAEPYVLDFVTHALGRGCGLCVMISRGCMGTPVRGDNFFHGARISDVRSTVKALRRSLPEHTPLVMVGYSMGGIIATNYAALTGENSGVSCCVSISGSFDTRTNIESRHSQQVWQPLLAMALKEHFVLSNTREIVKRGLNVSAIEA-CKNVLDIDTHLVAPYNGYPDVAAYYADMSAAADGKIAGLRTPTLAVTSLDDPIMTADGSPIAEVDTIKNLFILLTRNGGHVGW 515
BLAST of jgi.p|Trimin1|174668 vs. uniprot
Match: A0A7S1UFM6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFM6_9STRA) HSP 1 Score: 201 bits (510), Expect = 2.530e-56 Identity = 134/371 (36.12%), Postives = 185/371 (49.87%), Query Frame = 1 Query: 211 IKAGLYTSGAAGKKEVIKRVPALRAPFY--RGTPWMWSGDLLTLLPYVLFGHASVRYERRWLMVPEAFGPNSRATHLQDAIAHDNDNGTDASRQLALALDIAVPEAGHDPAKPFYIVLHGLNGSSAEPYLLDFVRGALGRGSSAAVLIARGLGGTPCADA-LFHGARVSDVDAAVNVLRRALGP-ATPLALVGFSIGGIIASNYLGVVG---------ARTP---LNAAVSLAGSFDTRANMSHAHSRRAWQPLLAIELKRRFVAPNAARMAARGVDPGGAA-ARARDVVDFDSDVVAPYHGYKDVYAYYEDMSAGCNGKHLSVAAPLLAVQALDDPIM-CPAGLP--IADVDKNDNLWLLVTQKGGHIGW 1263 +K G Y + V PAL +Y +GTPW+W+GD T P++ A V Y RRW+ G R +A D P G DP KP ++LHGLNG S E Y+LD V L RG + V+I+RGL TP F+GAR SDV AAV +L++++G P+A VGFS+GG++ SNY G G P L AAV+L+G D N +SR WQP LA +LK FV A A++G+D DV DFD + + + Y+D YY DMS + + VA P+L + A DDPI+ C + P A + +NL+ +++ GGH+G+ Sbjct: 42 VKPGFYFAPTPRNAAVAAACPALAPGYYERQGTPWLWNGDFTTFFPFISMNCAPVNYRRRWIRA----GDGER-----------------------VATDWTFPAGGFDPEKPVVLILHGLNGGSDEAYILDMVPRLLERGWTCVVMISRGLMNTPIESGNCFNGARTSDVHAAVRMLQKSVGALGAPIAAVGFSMGGVVLSNYCGTYGDPEKRREVSGEVPPFGLEAAVNLSGCIDCVKNSRCVYSRTVWQPFLAYQLKETFVGRFADLFASKGLDVHEVVKGHVVDVTDFDRETIVKVYDYEDTDDYYRDMSLAYHDRVRHVAKPVLWLHATDDPIIDCDSFAPGIKAAAEGQENLFFAISKTGGHVGF 385
BLAST of jgi.p|Trimin1|174668 vs. uniprot
Match: A0A0L0FS42_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FS42_9EUKA) HSP 1 Score: 199 bits (505), Expect = 2.000e-54 Identity = 133/380 (35.00%), Postives = 193/380 (50.79%), Query Frame = 1 Query: 130 AAAVLATALIALDEQLRLAVTGRHDSGIKAGLYTSGAAGKKEVIKRVPALRAPFYRGTPWMWSGDLLTLLPYVLFGHASVRYERRWLMVPEAFGPNSRATHLQDAIAHDNDNGTDASRQLALALDIAVP-EAGHDPAKPFYIVLHGLNGSSAEPYLLDFVRGALGRGSSAAVLIARGLGGTPCADA-LFHGARVSDVDAAVNVLRRALGPATPLALVGFSIGGIIASNYLGVVGARTPLNAAVSLAGSFDTRANMSHAHSRRAWQPLLAIELKRRFVAPNAARMAARGVDPGGAAARARDVVDFDSDVVAPYHGYKDVYAYYEDMSAGCNGKHLSVAAPLLAVQALDDPIMCPAGLPIADVDKNDNLWLLVTQKGGHIGW 1263 A A +A A++ +++ GR + ++ G Y S + V Y T W+++G TL P++ + VRY+R W+ P D + + LDIA P + G P +P +VLHGLNG S E Y +D V+ A +G + V+IARGL TP A LF+G R SD+ A + L+ L T + GFS+G II +NYL G L AAVSL+G FD+ N + SR+ WQP L LK+ F+ N + +D A RARDV++FD+ + AP G+ + YY +MS + + + PLLA+ A+DDPI+ +P+A N NL+ LVT GGH+GW Sbjct: 160 AGACVAMAMLIFRDEVMWRSFGRGTNHVQPGFYYSNTPRNNRIAAGVDE----HYNPTWWLFTGTHATLYPFLTYTIEEVRYKRMWVWNP-----------------------VDGEK---VGLDIAFPSDKGFQPDRPVLLVLHGLNGGSKELYCMDLVKRACAQGYTCVVMIARGLMQTPLTSANLFNGTRTSDLRATIVALKDVLPSDTKMVGCGFSMGAIILNNYLTRCGDDAGLEAAVSLSGGFDSVKNSLYDASRKVWQPFLVYALKKNFITENLDHPGFQEIDLHRAH-RARDVIEFDTALSAPLAGFPTLEDYYREMSGNYDDRMDQIRIPLLALHAVDDPIVDVDSIPLAHTATNANLFFLVTMNGGHVGW 508
BLAST of jgi.p|Trimin1|174668 vs. uniprot
Match: A0A1Z5JLF8_FISSO (AB hydrolase-1 domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JLF8_FISSO) HSP 1 Score: 189 bits (479), Expect = 1.460e-50 Identity = 125/362 (34.53%), Postives = 188/362 (51.93%), Query Frame = 1 Query: 256 VIKRVPALRAPFYRGTPWMWSGDLLTLLPYVLFGHASVRYERRWLMVPEAFGPNSRATHLQDAIAHDNDNGTDASRQLALALDIAVPEAGHDPAKPFYIVLHGLNGSSAEPYLLDFVRGALGRGSSAAVLIARGLGGTPCAD-ALFHGARVSDVDAAVNVLRRALGPATPLALVGFSIGGIIASNYLGVVGARTPLNAAVSLAGSFDTRANMSHAHSRRAWQPLLAIELKRRFVAPN-AARMAAR-GVDPGGAAARARDVVDFDSDVVAPYHGYKDVYAYYEDMSA--------------GCNGKHLSVAAPLLAVQALDDPIMCPAGLPIADVDKND---------NLWLLVTQKGGHIGW 1263 ++++ P + + TPWM +GD T LP++L + + R WL V HD+D S + +ALDIA P GHD KP Y+VLHGLNG S EPY+ + L S+ V++ARGL P +FHGAR +DV A VL++A+GP L VG+S+GGI+ SNY+ +G L+AAV+++G D R + R WQP++A+EL+ FV R+ +R A RA ++ D V Y+G++D+ YY +MSA + + +++ P L +QALDDP++ + D K+ NL+LL+T++GGH+GW Sbjct: 211 IVQQWPEVYRMYTPATPWMPTGDARTGLPFLLNRAPLIEWHRMWLPV------------------HDDD-----SVEEVVALDIAFPPHGHDSTKPIYLVLHGLNGGSQEPYVREMAGRRLAENSTVVVMVARGLMDLPVRGWNVFHGARWTDVHEAARVLQKAMGPDQLLVGVGYSMGGIVLSNYVARLGTECALHAAVAISGGLDMRVEAQPNRAHRLWQPIVAVELRDTFVVGKWGERVRSRLSKTQMKALMRATNIAGIDRTAVVAYNGFRDLMHYYSEMSALGDIPFEEFDSDVIAPHRRIHNISIPFLVLQALDDPLITWKTVASNDGWKHPANLTRTGSGNLFLLLTKRGGHVGW 549
BLAST of jgi.p|Trimin1|174668 vs. uniprot
Match: A0A7S4BG49_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BG49_CHRCT) HSP 1 Score: 177 bits (448), Expect = 1.470e-48 Identity = 105/267 (39.33%), Postives = 149/267 (55.81%), Query Frame = 1 Query: 523 GHDPAKPFYIVLHGLNGSSAEPYLLDFVRGALGRGSSAAVLIARGLGGTPCADAL-FHGARVSDVDAAVNVLRRALGPATPLALVGFSIGGIIASNYLGVVGARTPLNAAVSLAGSFDTRANMSHAHSRRAWQPLLAIELKRRFV-----------------APNAARMAARGVDPGGA-AARARDVVDFDSDVVAPYHGYKDVYAYYEDMSAGCNGKHLSVAAPLLAVQALDDPIMCPAGLPIADVDKNDNLWLLVTQKGGHIGWA 1266 G DP P +VLHGLNG SAE Y+LDFV + R + VLIARGLGG L F GAR +DV A ++V+ +A P TP+ VGFS+G I+ +NY GV G L+ A+S++G +D + ++ +R W P L +ELKR F+ + +MA++ +D +A + + DFD V+ P +GY + YY DMS +GK V+ PLLA+ A DDPI + NLW L+T++GGH+GW+ Sbjct: 1 GFDPTMPIALVLHGLNGGSAESYVLDFVHTSTQRKWTCVVLIARGLGGVALQSGLPFTGARTTDVAACIDVIAQA-APTTPIVGVGFSMGAIVLANYCGVSGDANKLSCAISISGCYDVTTGANVSYMKRVWHPWLTLELKRTFLRILTGSDSSAAVDFQCHGSSTTQMASQLIDVDVVLSAVVKTIRDFDYKVIVPLYGYPTIDKYYADMSLASHGKASRVSTPLLALHACDDPIADSDAYASVMAAAHPNLWFLITRRGGHVGWS 266
BLAST of jgi.p|Trimin1|174668 vs. uniprot
Match: A0A7S1FVV5_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FVV5_9STRA) HSP 1 Score: 173 bits (438), Expect = 2.240e-44 Identity = 126/339 (37.17%), Postives = 177/339 (52.21%), Query Frame = 1 Query: 301 TPWMWSGDLLTLLPYVLFGHASVRYERRWLMVPEAFGPNSRATHLQDAIAHDNDNGTDASRQLALALDIAVPEAGHDPAKPFYIVLHGLNGSSAEPYLLDFVRGALGRGSSAAVLIARGLGGTPC-ADALFHGARVSDVDAAVNVLRRALGPATPLALVGFSIGGIIASNYLGVVGARTPLNAAVSLAGSFDTRANMSHAHSRRAWQPLLAIELKRRFVAPNA-ARMAAR-GVDPGGAAARARDVVDFDSDVVAPY--HGYKDVYAYYEDMSA---------GCNGKHLSVAAPLLAVQALDDPIMCPAGL---PIADVDKND-NLWLLVTQKGGHIGW 1263 TP++ +GDL T+L Y+ A V+YERRW+ P + +ALD A P +GH+P++P Y+VLHGL+G S E ++ DFV A R S+ AVL+ARGL T ALFHGARV D+DAAV VLR +GP +A VGFS+GGI+ SNY+ G LN AV+++G D R + S+ WQ +A L R FV A ++ R G + RA +V+D Y H Y++ + +MSA G+ V PLL + ALDDP+ L P V+ + N+ + +T++GGH+GW Sbjct: 244 TPYVLNGDLRTILSYLWNDPADVKYERRWIASTSQDDPTPES----------------------IALDFAFPPSGHNPSQPVYLVLHGLSGGSNEGFVRDFVLHATSRNSTTAVLVARGLMDTKVEGPALFHGARVDDIDAAVQVLRTMVGPNGVIAGVGFSMGGIMLSNYVARSGEGCALNFAVNISGGLDMRQQVKFVRSKWLWQTFMAEGL-RDFVLKRAWLKIENRVGKEAVSTLLRASNVMDIIEHGFYRYNSHKYENSNQFLAEMSAMGDYKSGKPSAQGRIARVNIPLLVIFALDDPVSSHRTLGAHPEEVVETGEGNVIMAITKRGGHVGW 559
BLAST of jgi.p|Trimin1|174668 vs. uniprot
Match: A0A7S2LSQ2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LSQ2_9STRA) HSP 1 Score: 173 bits (438), Expect = 3.440e-44 Identity = 126/396 (31.82%), Postives = 194/396 (48.99%), Query Frame = 1 Query: 142 LATALIALDEQLRLAVTGRHDSGIKAGLYTSGAAGK-KEVIKRVPALRAPFYRGTPWMWSGDLLTLLPYVLFGHASVRYERRWLMVPEAFGPNSRATHLQDAIAHDNDNGTDASRQLALALDIAVPEAG-HDPAKPFYIVLHGLNGSSAEPYLLDFVRGALGRGSSAAVLIARGLGGTPCA-DALFHGARVSDVDAAVNVLRRALGPATPLALVGFSIGGIIASNYLGVVGARTPLNAAVSLAGSFDTRANMSHAHSRRAWQPLLAIELKRRFVAPNAARMAAR-GVDPGGAAARARDVVDFDSDVVAPYHGYKDVYAYYEDMSA-------------GCNGKHLSVAAPLLAVQALDDPIMCPAGLPIADVDK-----NDNLWLLVTQKGGHIGW 1263 LAT L+A D L I G Y + + K +++ P + RGTPW+ +GD+ T++P++L + + RRW + + DN+ A+ALD+ P G + KP YI+LHGLNG S EP++ DFV + GS+ AV+I RG TP + L H AR SD +AAV ++R + + VG+S+G I +NY+ G L+ AV+++G+ DTR +S+ S+R WQPLLA +K ++ R G + R+ ++ D ++PYHG+ YY +M A G+ ++ PLL + ALDD + L +D K N NL++L+T+ GGH+GW Sbjct: 250 LATILVAGDLDL---------PNISDGFYFDASNNRSKAIVEEWPVENRIYSRGTPWILNGDMRTVIPWLLNSVDVLPHIRRW---------------VPSDVPGDNE---------AVALDLFFPANGVYYSEKPIYIILHGLNGGSDEPFVQDFVSRQIAEGSTVAVMITRGFRNTPVVGENLPHFARTSDFEAAVRAIKRVSKDSQLIVGVGYSMGAITLANYVAKSGEICHLDVAVAISGALDTREQLSYERSKRIWQPLLARTMKNMLRKKFERKLLERLGRQRFISFIRSSNMASLDEHGMSPYHGFNSTVQYYAEMCAMGDMDLHEFNSYPSTVGRIADISIPLLTINALDDTVGAWRSLAGSDPSKLVHTGNGNLFILLTRHGGHVGW 612
BLAST of jgi.p|Trimin1|174668 vs. uniprot
Match: A0A8J2SGH4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SGH4_9STRA) HSP 1 Score: 168 bits (426), Expect = 2.360e-43 Identity = 127/330 (38.48%), Postives = 176/330 (53.33%), Query Frame = 1 Query: 316 SGDLLTLLPYVLFGH-ASVRYERRWLMVPEAFGPNSRATHLQDAIAHDNDNGTDASRQLALALDIAVPEAGHDPAKPFYIVLHGLNGSSAEPYLLDFVRGALGRGSSAAVLIARGLGGTPCADALFHGARVSDVDAAVNVLRRALGPATPLALVGFSIGGIIASNYLGVVGARTPLNAAVSLAGSFDTRANMSHA--HSRRAWQPLLAIELKRRFVA-PNAARMAAR-GVDPGGAAARARDVVDFDSDVVAPYHGYKDVYA---YYEDMSAGCNG-----KHLS-VAAPLLAVQALDDPIMCPAGLPIADVDKNDNLWLLVTQKGGHIGW 1263 SGDL TL+P+ FG A V + RRWL V A P+ H + D++ A+ALDIA+PE D A P +VLHGLNG S EPY+ D + A RGS A L+ARGL TP +LFHG R SDV AAV +L+ + G +AL+G S+GGI+A+NY G + L A +++ + + + +RR W P L +ELK+ F+ PNA + + ++ A + FDS +V P++GY + YY+DMSA G K L+ V P + A DDPI+ A K ++ LL T+ GGH GW Sbjct: 113 SGDLGTLVPFATFGEGAPVNWRRRWLRVARAPAPDGVDGHKRRGGKEDDE---------AVALDIALPEQPRDDA-PVILVLHGLNGGSDEPYVRDLAQAAHERGSVCACLVARGLMATPVRASLFHGGRTSDVGAAVALLKESFGDR--VALIGISMGGIVAANYAARSGIHSNLVACCAVSATLCSEIVLRPIGDRARRLWHPPLTLELKKTFLGGPNAPLLYDKCNINEIMAT---HTIAAFDSALVCPFNGYAAIDCEGGYYDDMSAAGRGDDRGFKRLANVHTPTFVLHAKDDPIVPFASCLPEACRKAGHVVLLATESGGHAGW 427
BLAST of jgi.p|Trimin1|174668 vs. uniprot
Match: A0A7S4MNZ9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MNZ9_9STRA) HSP 1 Score: 164 bits (415), Expect = 4.280e-41 Identity = 119/342 (34.80%), Postives = 173/342 (50.58%), Query Frame = 1 Query: 295 RGTPWMWSGDLLTLLPYVLFGHASVRYERRWLMVPEAFGPNSRATHLQDAIAHDNDNGTDA-SRQLALALDIAVPEAG-HDPAKPFYIVLHGLNGSSAEPYLLDFVRGALGRGSSAAVLIARGLGGTPC-ADALFHGARVSDVDAAVNVLRRALGPATPLALVGFSIGGIIASNYLGVVGARTPLNAAVSLAGSFDTRANMSHAHSRRAWQPLLAIELKRRFVAPNAARMAARGVDPGGA--AARARDVVDFDSDVVAPYHGYKDVYAYYEDMSAGCN-----------GKHLSVAAPLLAVQALDDPIMCPAGL-PIADVDKND--NLWLLVTQKGGHIGW 1263 RGTPW+ +GD T +P+V+ + RRWL TD + A+ LD A P G H KP Y++LHGLNG S E Y+ DFV + GS+ A+L+ RGL +P + L + AR++D+ +A LRR GP +A VG+S+G I +NYL G+ L+AAVS++G+ DTR + HS WQP LA L+ ++ R + P A +V+ D Y+GY +V YY ++ A + G+ +V+ P L V ALDDPI P + A V K+ N+++L+T+KGGH+GW Sbjct: 253 RGTPWLVTGDTRTGIPFVVNHLPEQKLVRRWLP-------------------------TDVPGEKEAVILDFAFPNDGIHRRDKPMYLILHGLNGGSNEDYVKDFVARSRVEGSTIAILVTRGLMNSPIYGENLINFARMNDISSAAKALRRVAGPNQTVAGVGYSMGAICLANYLARSGSNCDLDAAVSISGALDTRVQLHFKHSLHFWQPFLAKTLRETITGKFMNKLR-RKLTPEQVLDVEEAASIVELDRAFFVRYYGYDNVEHYYSELGAMGDWVSFHGPPHKTGRISNVSVPFLTVNALDDPIGDPRCIRDPAKVAKSGKGNVFVLLTRKGGHVGW 568 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|174668 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11288 ID=mRNA_11288|Name=jgi.p|Trimin1|174668|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1308bp|location=Sequence derived from alignment at Contig_116:258424..263949+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CTGGCCGTCATCGCGCCCCCCCTGATCGCGATGGCGCGCCTCTCCTTCGCback to top protein sequence of jgi.p|Trimin1|174668 >Trimin1|174668|e_gw1.116.68.1 ID=Trimin1|174668|e_gw1.116.68.1|Name=jgi.p|Trimin1|174668|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=436bp LAVIAPPLIAMARLSFALARPYLPLVILALAALNVLPPRESVAAAAVLATback to top mRNA from alignment at Contig_116:258424..263949+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11288 ID=mRNA_11288|Name=jgi.p|Trimin1|174668|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5526bp|location=Sequence derived from alignment at Contig_116:258424..263949+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_116:258424..263949+ >mRNA_11288 ID=mRNA_11288|Name=jgi.p|Trimin1|174668|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1308bp|location=Sequence derived from alignment at Contig_116:258424..263949+ (Tribonema minus UTEX_B_3156 )back to top |