Trimin1|352316|estExt_Genemark1.C_Ctg_1150030 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352316
Unique NameTrimin1|352316|estExt_Genemark1.C_Ctg_1150030
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1470
Homology
BLAST of jgi.p|Trimin1|352316 vs. uniprot
Match: A0A835ZG00_9STRA (Rab3 GTPase-activating protein regulatory subunit N-terminus-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG00_9STRA)

HSP 1 Score: 2228 bits (5773), Expect = 0.000e+0
Identity = 1469/1469 (100.00%), Postives = 1469/1469 (100.00%), Query Frame = 0
Query:    1 MEQKFTSGAANANAVISDDTAASSLSPAAPTATVAIYSCGEAAGDPHEVQLIAPASALLWCDGVLVCGLASGQLSFVQKDAQGDWRALHQADASAGLEITCSKLQLQGQDAVHDVAICRPLPSLFEVRSAHAHLILGAGAGPALASYLLGRDVGIFSLRQVAWAVAGKLXXXXXXXXXXXXXXXXGFVGIGRRSSXXXXXXXXXXXXXXXXXXXXXXXXXRQPPSTPLSRATVPLDDARRVITHIWADPSGRYAAAADAFGRVLLLDSQLGGXXXXXXXXXXXTVVRMWKGLRGARCGWLEAHERWEGGRVVAVSCGETAGGXXXXXXXXXXXXXXXXASDVRVGLYLVILAPHRCHVEIWRACHGPCVRVLPAAAGARLCTLRGRDAATAAXXXXXDDATPASGLGLGQGSLTRCFLLAPSVDATCIDATQLVVTPADLQVLRLLRQPAGAAAXXXXXXXXDTAAESAPRPRFSLRQLHSELRKLQXXXXXXXXXXXXXXLDEQRLLTLLGAAAAPAVPPRHLADALAAVDAACEQQGLALSAALHAQAAALAGTRAAXXXXXAAGPHGDGGSSEADAFAALRLRHAAHDLFAAIVAADADLAADGXXXXXXXXXXADGTSFMTNGARGWSLAQLAEETMAWIDLSDADSNGDSAQVLPPLPSFQEFWLVAQAALEAPQDAQPPLQWCAXXXXXXXXXXXXXXXXXXXXXXRQLTALLLRPLLAGAFGSRALEATLDSIGGDPITSPLVAGFAAWALALPPRRAARVTLAQDARACVALRWLRAQITAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVQRLLQPVYDACRASAALEAALLLAVVAGEAEAAAAAHVESRSLGAVVLNGAARWAALARRLRACLLLRHRLAHGRGAESASLTVQQLEEGRAPSSMAAMLAKDQLVTYDDLATAACRAREADELQAAHDWWRDAAAAGGAAAGASALPGVTHVCADARWRDVMEVAAAHSRRGSXXXXXXXXXXXXXXXXXQGRTLLWFFPAHAQPLLLACHRARWLMMSWAAMARGGGGADALQPLGAAVEHLSYVGAVHRALAGAVAYRLWNSGLRQYAGAAARSAAPLLEADAAVLQVAISAAEQFLGHIDAIAADXXXXXXXXXXXXXXXXXRQAATECALEAEGAAAGAWPGAQDRWLHECLFGSSGGDXXXXXXXXXXXXXVGLVLPRRAALEAHGVLLQALRVASTCGFAGADALRVLPAAAAERAFREGALADARVVTNPGTRAGGVGGAEEAARAAAAGPLGERRRAFVSAALHALGGASAAGVYALAQRLGEDAGAVRIAHTRALLARGRDLEAETLLSGSSGGVAEGIAREVVRASRSRLYVAVAAAAAHPTLLAALDPEVCEWINSAAAADXXXXXXXXXXXXXXXXXAAPSLKSTQGLLEAAARAVPAGGAQRQQLEQLCAFVGALVRGLSGGHRGSVGSYG 1469
            MEQKFTSGAANANAVISDDTAASSLSPAAPTATVAIYSCGEAAGDPHEVQLIAPASALLWCDGVLVCGLASGQLSFVQKDAQGDWRALHQADASAGLEITCSKLQLQGQDAVHDVAICRPLPSLFEVRSAHAHLILGAGAGPALASYLLGRDVGIFSLRQVAWAVAGKLXXXXXXXXXXXXXXXXGFVGIGRRSSXXXXXXXXXXXXXXXXXXXXXXXXXRQPPSTPLSRATVPLDDARRVITHIWADPSGRYAAAADAFGRVLLLDSQLGGXXXXXXXXXXXTVVRMWKGLRGARCGWLEAHERWEGGRVVAVSCGETAGGXXXXXXXXXXXXXXXXASDVRVGLYLVILAPHRCHVEIWRACHGPCVRVLPAAAGARLCTLRGRDAATAAXXXXXDDATPASGLGLGQGSLTRCFLLAPSVDATCIDATQLVVTPADLQVLRLLRQPAGAAAXXXXXXXXDTAAESAPRPRFSLRQLHSELRKLQXXXXXXXXXXXXXXLDEQRLLTLLGAAAAPAVPPRHLADALAAVDAACEQQGLALSAALHAQAAALAGTRAAXXXXXAAGPHGDGGSSEADAFAALRLRHAAHDLFAAIVAADADLAADGXXXXXXXXXXADGTSFMTNGARGWSLAQLAEETMAWIDLSDADSNGDSAQVLPPLPSFQEFWLVAQAALEAPQDAQPPLQWCAXXXXXXXXXXXXXXXXXXXXXXRQLTALLLRPLLAGAFGSRALEATLDSIGGDPITSPLVAGFAAWALALPPRRAARVTLAQDARACVALRWLRAQITAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVQRLLQPVYDACRASAALEAALLLAVVAGEAEAAAAAHVESRSLGAVVLNGAARWAALARRLRACLLLRHRLAHGRGAESASLTVQQLEEGRAPSSMAAMLAKDQLVTYDDLATAACRAREADELQAAHDWWRDAAAAGGAAAGASALPGVTHVCADARWRDVMEVAAAHSRRGSXXXXXXXXXXXXXXXXXQGRTLLWFFPAHAQPLLLACHRARWLMMSWAAMARGGGGADALQPLGAAVEHLSYVGAVHRALAGAVAYRLWNSGLRQYAGAAARSAAPLLEADAAVLQVAISAAEQFLGHIDAIAADXXXXXXXXXXXXXXXXXRQAATECALEAEGAAAGAWPGAQDRWLHECLFGSSGGDXXXXXXXXXXXXXVGLVLPRRAALEAHGVLLQALRVASTCGFAGADALRVLPAAAAERAFREGALADARVVTNPGTRAGGVGGAEEAARAAAAGPLGERRRAFVSAALHALGGASAAGVYALAQRLGEDAGAVRIAHTRALLARGRDLEAETLLSGSSGGVAEGIAREVVRASRSRLYVAVAAAAAHPTLLAALDPEVCEWINSAAAADXXXXXXXXXXXXXXXXXAAPSLKSTQGLLEAAARAVPAGGAQRQQLEQLCAFVGALVRGLSGGHRGSVGSYG
Sbjct:    1 MEQKFTSGAANANAVISDDTAASSLSPAAPTATVAIYSCGEAAGDPHEVQLIAPASALLWCDGVLVCGLASGQLSFVQKDAQGDWRALHQADASAGLEITCSKLQLQGQDAVHDVAICRPLPSLFEVRSAHAHLILGAGAGPALASYLLGRDVGIFSLRQVAWAVAGKLXXXXXXXXXXXXXXXXGFVGIGRRSSXXXXXXXXXXXXXXXXXXXXXXXXXRQPPSTPLSRATVPLDDARRVITHIWADPSGRYAAAADAFGRVLLLDSQLGGXXXXXXXXXXXTVVRMWKGLRGARCGWLEAHERWEGGRVVAVSCGETAGGXXXXXXXXXXXXXXXXASDVRVGLYLVILAPHRCHVEIWRACHGPCVRVLPAAAGARLCTLRGRDAATAAXXXXXDDATPASGLGLGQGSLTRCFLLAPSVDATCIDATQLVVTPADLQVLRLLRQPAGAAAXXXXXXXXDTAAESAPRPRFSLRQLHSELRKLQXXXXXXXXXXXXXXLDEQRLLTLLGAAAAPAVPPRHLADALAAVDAACEQQGLALSAALHAQAAALAGTRAAXXXXXAAGPHGDGGSSEADAFAALRLRHAAHDLFAAIVAADADLAADGXXXXXXXXXXADGTSFMTNGARGWSLAQLAEETMAWIDLSDADSNGDSAQVLPPLPSFQEFWLVAQAALEAPQDAQPPLQWCAXXXXXXXXXXXXXXXXXXXXXXRQLTALLLRPLLAGAFGSRALEATLDSIGGDPITSPLVAGFAAWALALPPRRAARVTLAQDARACVALRWLRAQITAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVQRLLQPVYDACRASAALEAALLLAVVAGEAEAAAAAHVESRSLGAVVLNGAARWAALARRLRACLLLRHRLAHGRGAESASLTVQQLEEGRAPSSMAAMLAKDQLVTYDDLATAACRAREADELQAAHDWWRDAAAAGGAAAGASALPGVTHVCADARWRDVMEVAAAHSRRGSXXXXXXXXXXXXXXXXXQGRTLLWFFPAHAQPLLLACHRARWLMMSWAAMARGGGGADALQPLGAAVEHLSYVGAVHRALAGAVAYRLWNSGLRQYAGAAARSAAPLLEADAAVLQVAISAAEQFLGHIDAIAADXXXXXXXXXXXXXXXXXRQAATECALEAEGAAAGAWPGAQDRWLHECLFGSSGGDXXXXXXXXXXXXXVGLVLPRRAALEAHGVLLQALRVASTCGFAGADALRVLPAAAAERAFREGALADARVVTNPGTRAGGVGGAEEAARAAAAGPLGERRRAFVSAALHALGGASAAGVYALAQRLGEDAGAVRIAHTRALLARGRDLEAETLLSGSSGGVAEGIAREVVRASRSRLYVAVAAAAAHPTLLAALDPEVCEWINSAAAADXXXXXXXXXXXXXXXXXAAPSLKSTQGLLEAAARAVPAGGAQRQQLEQLCAFVGALVRGLSGGHRGSVGSYG 1469          
BLAST of jgi.p|Trimin1|352316 vs. uniprot
Match: D8LQI6_ECTSI (Rab3 GTPase-activating protein, non-catalytic subunit, distant homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQI6_ECTSI)

HSP 1 Score: 295 bits (755), Expect = 1.570e-77
Identity = 472/1633 (28.90%), Postives = 621/1633 (38.03%), Query Frame = 0
Query:  102 SKLQLQGQDAVHDVAICRPLPSLFEVRSA-HAHLILGAGAGPALASYLLGRDVGIFSLRQVAWAVAGKLXXXXXXXXXXXXXXXXGFVGIGRRSSXXXXXXXXXXXXXXXXXXXXXXXXXRQPPSTPLSRATV-----PLDDARRVITHIWADPSGRYAAAADAFGRVLLLDSQLGGXXXXXXXXXXXTVVRMWKGLRGARCGWLEAHERWEGGRVVAVSCGETAGGXXXXXXXXXXXXXXXXASDVRVGLYLVILAPHRCHVEIWRACHGPCVRVLPAAAGARLCTLRGRDAATAAXXXXXDDATPASGLGLGQGSLTRCFLL---APSVDATCIDATQLVVTPADLQVL--RLLRQP-----------AGAAAXXXXXXXXDTAAESAPRPRFSLRQLHSELRKLQXXXXXXXXXXXXXX--LDEQRLLTLLGAAAAPAVPPRHLADALAAVDAACEQQGLALSAALHAQAAALAGTRAAXXXXXAAGPHGDGGSSEADAFA----------------ALRLRHAAHDLFAAIVAADADLAADGXXXXXXXXXXADGTSFMTNGARGWSLAQLAEETMAWIDLSDADSNGDSAQVLPPLPSFQEFWLVAQAALEAPQ--------------DAQPPL------------------------------------QWCAXXXXXXXXXXXXXXXXXXXXXXRQLTALLLRPLLAGAFGSRALEATLDSIG---GDPITSPLVAGFAAWALALPPRRAARVTLAQDARACVALRWLRAQITAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVQRL---------------------------------------------------------------------LQPVYDACRASAALEAALLLAVVAGEAEAAAAAHVESRSLGAVVLNGAARWAALARRLRACLLLRHRLAHG-RGAESASLTVQQLEEGRAPSSMAAMLAKDQLVTYDDLATAACRAREADELQAAHDWWRDAA--------------AAGGAAAGASALPG---VTHVCA----------DARWRDVMEVAA---------------------------------------------AHSRRGSXXXXXXXXXXXXXXXXXQGRTLLWFFPAHAQPLLLACHRARWLMMSWA------------AMARG------GGGADALQPLGAAVEHLSYVGAVHRALAGAVAYRLWNSGLRQYAGAAARSAAPLLEADAAVLQVAISAAEQFLGHIDAIAADXXXXXXXXXXXXXXXXXRQAATECALEAEGAAAGA-WPGAQDRWLHECLFGSSGGDXXXXXXXXXXXXXVGLVLPRRAALEAHGVLLQALRVASTCGFAGADALRVLP---AAAAERAFREGALADARVVTNPGTRAGGVGGAEEAARAAAAGPLGER-----RRAFVSAALHALGGASAAGVYALAQRLGEDAGAVRIAHTRALLARGRDLEAETLLSGSSGGVAEGIAREVVRASRSRLYVAVAAAAAHPT----LLAALDPEVCEWINSAAAADXXXXXXXXXXXXXXXXXAAPSLKSTQGLLEAAARAVPAGGAQRQQLEQLCAFVGALVRGLSGGHRGSVGSY 1468
            +KLQL+GQ  V DV  C     LFEVRS  H+H+IL +G  PALA Y +G +   F L  +AWAVA ++                GFVG+  R       XXXXXXXXXXXXXXXXXXXX      P     V      L D  R ++ ++  PSGR AAAAD FGRV+L+D                 ++RMWKG+R A CGWLE  E WEG RV +V                        A+   VGLYL ILAP R  VE+WR  HGPCVRV+ A AGARL T R   AA +       DAT   G G    +LT CFLL   A   +   +  + L+V   DL  L  RL R+P           A A            A    PR   +   +  E  +L                 L+    L    A+  PA+P        +  D A E     LSA+   + +AL   RA      AAG   DG   +A                    ALR R AA +L+  + + + + A              D  +F+  G RGW    L EE   W D+   ++ G +      LP FQEF       LE  +              D  PPL                                        XXXXXXXXXXXXXXX        +L   L RPLL+ AF   +L   L  +G   G+   + LV   AAW L LP  RAA  T+ ++A+ C  LRWL+  I A                                    R+                                                                     L+P+++AC AS  LE A +L+VV  EA AA    +E  SLG V + G   W  LARRLR CL L HRL  G    +    ++++ EEG+A  S+ A +AKDQL+++ DL+ AAC ARE  E++A+    R+AA                G      SAL G   + H  A          D  WR V  VAA                                             +H + G                     T L+F  +HAQP++LACHR RWL++SWA            A  RG      G    A++ L  AV+HLSY+                            R+A PLL    A  +V  SAA+                                 +  +L  EGA     WPGA DRW+ ECL  +                   +  P +AA+ AH  LL+ALRV++ CG    D L +     +  A+ +  +  LA   V  + G R   VG     A     G  GER     R +++  AL A+    A  VY LA+  G     VR  H   LL RG D+  E  LS       + +A +++   R RL   +      P+    LLA+LD + C W+ SA   +                 A   L+ST G+L   ARA+P    Q+ Q + L A VG ++R + G      G +
Sbjct:  129 AKLQLEGQGEVLDVVACAAPSGLFEVRSERHSHVILASGVSPALAFYPIGSESRSFGLASIAWAVASRVTSLTVGALDGLF----GFVGLRGRGKKAVGGXXXXXXXXXXXXXXXXXXXXXXXXXXPSPAPLVLHWDGGLQDGWRRVSRLFLGPSGRLAAAADGFGRVMLVDCAT------------RQILRMWKGVRDAECGWLEVVESWEGRRVESVGRKGRFAATAAAAAPAQQPGESVAATTPVVGLYLAILAPLRGRVELWRMRHGPCVRVISAPAGARLLTSRPSLAAPSGDGGVSVDAT---GKGRHAEALTSCFLLTGGAGGSEERKLRLSPLMVEEEDLADLPNRLSREPTVDDPYRLRKLAAAVEEMRTHGTTSRAGRGQPRGTATTLDVAGERGRLPAGQEAREDVVFQLLSRLESVESLAQATASLGPAIPKPSATSPDSTSDRALE-----LSASFQRRVSALCRERA---EQAAAGAETDGSKDKAXXXXXXXXXXXXXXXXXXXXALRFRAAAFELYTVLESVELNPAGGDE----------DDPAFLAPGNRGWKHGVLCEEAAGWADMV-RETGGGAPLPSAELPDFQEFLETVAVVLEVAEEPAAGSRRVPRGGRDRSPPLLRFVAPGHRDRGPSIGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADYARCRTRLFGWLFRPLLSDAFALASLTQALSLLGLGGGNGQAAVLVRDLAAWFLELPVGRAADTTVGREAQNCPVLRWLKGVILAWASSSTKRSTADGGEDGDDGVSFLDRETAAPPDTESRMKDLFGDPVVRGRGVIVAGGTDDADGGEAASXXXXXXXXXXXXXXXXXXXXXXXXXXXAEEGGEKDAEEILRPMFEACAASQRLENASMLSVVTAEALAACREKLEESSLGQVAIGGGEAWVTLARRLRLCLFLDHRLHWGVLAGQRDRASLRRFEEGKA--SVYAFVAKDQLMSFRDLSFAACSARERGEVEASARSQREAAEEAKAXXXXXGRQLVRGEQRRRPSALAGEDGIGHAVAAASSLADAQMDEHWRAVQAVAARAGNSPMMAALGGVVPAVAEPRAGPGGNRENKPRRDEQASSPRGHSHRKSGDGAGAAEGSVVLPGTFPESPPTSLFFMRSHAQPIVLACHRTRWLVLSWASTGPRSEEALRRAADRGALSESVGATEAAVRRLSLAVDHLSYL----------------------------RTARPLLAGGGAGGKVLSSAAD--------------------------------VSFMSLLTEGAVQRCPWPGAWDRWVEECLRDAQ------------------VHPPLQAAVAAHSTLLRALRVSAVCGLPEEDTLGLFEQGRSLCADSSLSDENLASPAV--SGGDRRTAVG-----APPPGEGVQGERHVVAQRESYIRRALDAVVPRPAQNVYRLARDFGVSEDTVRGWHCLVLLRRGHDVLGEEALSQIFS--LQDLAGDILTVMRLRLKRFLDFLETSPSASRGLLASLDADTCRWVRSARYPEAREKGQGGVQSEKE---AGEPLRSTHGVLLCLARALPRESRQKLQADALVALVGTMLRHMGGAGASGAGYH 1631          
BLAST of jgi.p|Trimin1|352316 vs. uniprot
Match: A0A197KFI0_9FUNG (RAB3GAP2_N domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197KFI0_9FUNG)

HSP 1 Score: 70.9 bits (172), Expect = 1.710e-8
Identity = 63/208 (30.29%), Postives = 86/208 (41.35%), Query Frame = 0
Query:  235 LDDARRVITHIWADPS----------GRYAAAADAFGRVLLLDSQLGGXXXXXXXXXXXTVVRMWKGLRGARCGWLEAHERWEGGRVVAVSCGETAGGXXXXXXXXXXXXXXXXASDVRVGLYLVILAPHRCHVEIWRACHGPCVRVLPAAAGARLCTLRGRDAATAAXXXXXDDATPASG----------LGLGQGSLTRCFLLAPS 422
            L D++R I H+   P            + AA  D+ GRVLL+D +               ++RMWKGLRGARCGWL+     + GR    S G+TAG                  +   + LYLVI AP R  VE++ A  G    +L    G ++CT         A       AT  SG          +   Q  L +CFL+ P+
Sbjct:  530 LSDSQRCIRHVSLAPPPPRGTCYHSPSKLAAMTDSLGRVLLVDLE------------ECEIIRMWKGLRGARCGWLQEERIVKTGRGTGDS-GDTAG-----------------LTKRHLVLYLVIYAPKRGTVEVYPARQGKRAGLLQVGLGWKVCTTFTTPIGKPAVLDRIKGATLGSGARDSSGVVPSISASQHDLAQCFLVGPT 707          
BLAST of jgi.p|Trimin1|352316 vs. uniprot
Match: A0A1Y2GXP5_9FUNG (Rab3 GTPase-activating protein regulatory subunit N-terminus-domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GXP5_9FUNG)

HSP 1 Score: 62.0 bits (149), Expect = 9.150e-6
Identity = 52/158 (32.91%), Postives = 68/158 (43.04%), Query Frame = 0
Query:  235 LDDARRVITHIWADP----------SGRYAAAADAFGRVLLLDSQLGGXXXXXXXXXXXTVVRMWKGLRGARCGWLEAHERWEGGRVVAVSCGETAGGXXXXXXXXXXXXXXXXASDVRVGLYLVILAPHRCHVEIWRACHGPCVRVLPAAAGARLCT 382
            L D +R I H+   P            + AA  D+ GRVLL+D +               ++RMWKGLRGARCGW++  ER        V  GE + G                     + LYLVI AP R  VEI+ A  G  V V+    G ++CT
Sbjct:  554 LSDPQRCIRHLSLAPFPPRGSCYHYPSKLAAMTDSLGRVLLVDLE------------ECEIIRMWKGLRGARCGWVQ-EER-------IVRSGEASNGSSTFKK--------------HLVLYLVIYAPKRGTVEIYPARQGKRVGVMQVGLGWKVCT 677          
BLAST of jgi.p|Trimin1|352316 vs. uniprot
Match: A0A2R5G8V0_9STRA (Rab3 GTPase-activating protein non-catalytic subunit n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G8V0_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 5.240e-5
Identity = 45/130 (34.62%), Postives = 56/130 (43.08%), Query Frame = 0
Query:  235 LDDARRVIT-HI-WADPSGRYAAAADAFGRVLLLDSQLGGXXXXXXXXXXXTVVRMWKGLRGARCGWLEAHERWEGGRVVAVSCGETAGGXXXXXXXXXXXXXXXXASDVRVGLYLVILAPHRCHVEIWR 362
             D   RV+  H+   DPS RYA   DA GRV+LLD+                ++R+WKG R A+  WL   E W        +C E +                    D R G YLVILAP R  V+IWR
Sbjct:  112 FDSVNRVVNGHLNGQDPSQRYAVTVDALGRVVLLDT------------CGLRLLRIWKGYRDAQTAWLTCPESWTD--QEDDTCNEASA-----REGEPSVDCGAEGGDERNGQYLVILAPWRETVQIWR 222          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352316 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835ZG00_9STRA0.000e+0100.00Rab3 GTPase-activating protein regulatory subunit ... [more]
D8LQI6_ECTSI1.570e-7728.90Rab3 GTPase-activating protein, non-catalytic subu... [more]
A0A197KFI0_9FUNG1.710e-830.29RAB3GAP2_N domain-containing protein n=1 Tax=Linne... [more]
A0A1Y2GXP5_9FUNG9.150e-632.91Rab3 GTPase-activating protein regulatory subunit ... [more]
A0A2R5G8V0_9STRA5.240e-534.62Rab3 GTPase-activating protein non-catalytic subun... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 476..496
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..216
IPR032839Rab3-GAP regulatory subunit, N-terminalPFAMPF14655RAB3GAP2_Ncoord: 87..380
e-value: 8.1E-30
score: 104.3
IPR026059Rab3GAP regulatory subunitPANTHERPTHR12472RAB3-GAP REGULATORY DOMAINcoord: 99..1093

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_115contigContig_115:201244..209176 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352316mRNA_11661Tribonema minus UTEX_B_3156 mRNAContig_115 201244..209176 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352316|estExt_Genemark1.C_Ctg_1150030 ID=Trimin1|352316|estExt_Genemark1.C_Ctg_1150030|Name=jgi.p|Trimin1|352316|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1470bp
MEQKFTSGAANANAVISDDTAASSLSPAAPTATVAIYSCGEAAGDPHEVQ
LIAPASALLWCDGVLVCGLASGQLSFVQKDAQGDWRALHQADASAGLEIT
CSKLQLQGQDAVHDVAICRPLPSLFEVRSAHAHLILGAGAGPALASYLLG
RDVGIFSLRQVAWAVAGKLAGMAIGTLNGTIGGVLGFVGIGRRSSSDKSP
PPSQQQQQLQRDSSPPPSSTRQPPSTPLSRATVPLDDARRVITHIWADPS
GRYAAAADAFGRVLLLDSQLGGSSSGGGGGGGGTVVRMWKGLRGARCGWL
EAHERWEGGRVVAVSCGETAGGGGAGADAMEEEEEEEEASDVRVGLYLVI
LAPHRCHVEIWRACHGPCVRVLPAAAGARLCTLRGRDAATAAAAAAADDA
TPASGLGLGQGSLTRCFLLAPSVDATCIDATQLVVTPADLQVLRLLRQPA
GAAAAAAATPAADTAAESAPRPRFSLRQLHSELRKLQQQQQQQQQCSACS
ALDEQRLLTLLGAAAAPAVPPRHLADALAAVDAACEQQGLALSAALHAQA
AALAGTRAAAAPAAAAGPHGDGGSSEADAFAALRLRHAAHDLFAAIVAAD
ADLAADGGGGGAAAAAAADGTSFMTNGARGWSLAQLAEETMAWIDLSDAD
SNGDSAQVLPPLPSFQEFWLVAQAALEAPQDAQPPLQWCAAAASSSSSGG
SADGATAAAAAARQLTALLLRPLLAGAFGSRALEATLDSIGGDPITSPLV
AGFAAWALALPPRRAARVTLAQDARACVALRWLRAQITAAAAAAPAADAA
ADVDDDGGSSGGDAAPAESAAALVQRLLQPVYDACRASAALEAALLLAVV
AGEAEAAAAAHVESRSLGAVVLNGAARWAALARRLRACLLLRHRLAHGRG
AESASLTVQQLEEGRAPSSMAAMLAKDQLVTYDDLATAACRAREADELQA
AHDWWRDAAAAGGAAAGASALPGVTHVCADARWRDVMEVAAAHSRRGSGS
SSGGGGGGGGGAAAAQGRTLLWFFPAHAQPLLLACHRARWLMMSWAAMAR
GGGGADALQPLGAAVEHLSYVGAVHRALAGAVAYRLWNSGLRQYAGAAAR
SAAPLLEADAAVLQVAISAAEQFLGHIDAIAADDDGGGGDGGGDAAAAAA
RQAATECALEAEGAAAGAWPGAQDRWLHECLFGSSGGDGGSGGGGGPGGG
GVGLVLPRRAALEAHGVLLQALRVASTCGFAGADALRVLPAAAAERAFRE
GALADARVVTNPGTRAGGVGGAEEAARAAAAGPLGERRRAFVSAALHALG
GASAAGVYALAQRLGEDAGAVRIAHTRALLARGRDLEAETLLSGSSGGVA
EGIAREVVRASRSRLYVAVAAAAAHPTLLAALDPEVCEWINSAAAADGGS
GGSGGGGGGGGAAVAAPSLKSTQGLLEAAARAVPAGGAQRQQLEQLCAFV
GALVRGLSGGHRGSVGSYG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032839RAB3GAP_N
IPR026059Rab3GAP2