mRNA_11001 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|171483
Unique NamemRNA_11001
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|171483 vs. uniprot
Match: A0A836C7U4_9STRA (MPN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7U4_9STRA)

HSP 1 Score: 380 bits (977), Expect = 6.220e-134
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1 
Query:    1 MQAAPNRPAAGTLHTPSVCHTQQYSSPVSACRWHFAYPQCLPHSAVCVACLRLQTGSSDSCTATGEELVFSYMLEFKLITLGWIHTHPRQDCFMSSVDLHTHAGYQIMLPEAVAVVIAPTDAAKRVGVFRLEAPHGLRLILDCRLKGFHPHPTDVTIYGDARVEWDARAPLSVVDLRKAGR 543
            MQAAPNRPAAGTLHTPSVCHTQQYSSPVSACRWHFAYPQCLPHSAVCVACLRLQTGSSDSCTATGEELVFSYMLEFKLITLGWIHTHPRQDCFMSSVDLHTHAGYQIMLPEAVAVVIAPTDAAKRVGVFRLEAPHGLRLILDCRLKGFHPHPTDVTIYGDARVEWDARAPLSVVDLRKAGR
Sbjct:    1 MQAAPNRPAAGTLHTPSVCHTQQYSSPVSACRWHFAYPQCLPHSAVCVACLRLQTGSSDSCTATGEELVFSYMLEFKLITLGWIHTHPRQDCFMSSVDLHTHAGYQIMLPEAVAVVIAPTDAAKRVGVFRLEAPHGLRLILDCRLKGFHPHPTDVTIYGDARVEWDARAPLSVVDLRKAGR 181
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BLAST of jgi.p|Trimin1|171483 vs. uniprot
Match: A0A6H5KVQ9_9PHAE (MPN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVQ9_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 3.520e-48
Identity = 80/124 (64.52%), Postives = 97/124 (78.23%), Query Frame = 1 
Query:  160 QTGSSDSCTATGEELVFSYMLEFKLITLGWIHTHPRQDCFMSSVDLHTHAGYQIMLPEAVAVVIAPTDAAKRVGVFRLEAPHGLRLILDCRLKGFHPHPTDVTIYGDARVEWDARAPLSVVDLR 531
            QTG+S+S   T E  +F++ML  KLITLGWIHTHP+QDCFMSSVD+HTH GYQ+MLPEAVAVV AP D  KRVGVFRL  P G++LI +C+LKGFH HP D+TIY  A + W A   +++VDLR
Sbjct:  285 QTGTSNSVETTDETELFNFMLSNKLITLGWIHTHPKQDCFMSSVDVHTHCGYQLMLPEAVAVVYAPGDNKKRVGVFRLTQPEGMKLIQECKLKGFHQHPDDITIYEQADLTW-APVRMTIVDLR 407
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BLAST of jgi.p|Trimin1|171483 vs. uniprot
Match: A0A7S3XHL2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XHL2_HETAK)

HSP 1 Score: 162 bits (411), Expect = 4.460e-46
Identity = 76/128 (59.38%), Postives = 90/128 (70.31%), Query Frame = 1 
Query:  160 QTGSSDSCTATGEELVFSYMLEFKLITLGWIHTHPRQDCFMSSVDLHTHAGYQIMLPEAVAVVIAPTDAAKRVGVFRLEAPHGLRLILDCRLKGFHPHPTDVTIYGDARVEWDARAPLSVVDLRKAGR 543
            Q  + +SC  T E+ +F Y  E  L+TLGWIHTHP Q CFMSSVDLHTHA YQ +LPEAVAVV+APTD AKRVGVFRL  P GL+ ++ C L GFH HP DV IY D  ++W  R P   VD+R+  R
Sbjct:  195 QEATPNSCGMTHEDELFHYCFEHNLLTLGWIHTHPTQTCFMSSVDLHTHAPYQALLPEAVAVVVAPTDNAKRVGVFRLTEPAGLQTVMACTLTGFHQHPADVEIYQDVNIDWKNR-PFETVDMRRRSR 321
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BLAST of jgi.p|Trimin1|171483 vs. uniprot
Match: A0A397B7M9_9STRA (MPN domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397B7M9_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.400e-45
Identity = 72/127 (56.69%), Postives = 93/127 (73.23%), Query Frame = 1 
Query:  160 QTGSSDSCTATGEELVFSYMLEFKLITLGWIHTHPRQDCFMSSVDLHTHAGYQIMLPEAVAVVIAPTDAAKRVGVFRLEAPHGLRLILDCRLKGFHPHPTDVTIYGDA-RVEWDARAPLSVVDLRKA 537
            Q GSSD+CT T EE +F Y ++  L+TLGWIHTHP Q CF+SSVD+HT  G+Q ML EA+A+V+AP D  K VGVFRL  PHG+ LI +C L GFH HP++V IY DA ++ WDA    ++VD+R +
Sbjct:  157 QEGSSDTCTMTHEEDLFEYCIQHDLLTLGWIHTHPSQTCFLSSVDIHTQCGFQSMLSEAIAIVVAPRDPVKNVGVFRLTTPHGMELIQNCTLSGFHEHPSNVEIYSDAMQLTWDAARHAALVDMRSS 283
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BLAST of jgi.p|Trimin1|171483 vs. uniprot
Match: A0A6G0WED5_9STRA (MPN domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WED5_9STRA)

HSP 1 Score: 162 bits (411), Expect = 5.160e-45
Identity = 72/126 (57.14%), Postives = 92/126 (73.02%), Query Frame = 1 
Query:  160 QTGSSDSCTATGEELVFSYMLEFKLITLGWIHTHPRQDCFMSSVDLHTHAGYQIMLPEAVAVVIAPTDAAKRVGVFRLEAPHGLRLILDCRLKGFHPHPTDVTIYGDA-RVEWDARAPLSVVDLRK 534
            Q GSSD+CT T EE +F + +E  L+TLGWIHTHP Q CF+SSVD+HT  G+Q ML EA+A+V+AP D  K +GVFRL  PHGL LI +C L GFH HP+++ IY DA ++ WD+     VVD+RK
Sbjct:  297 QQGSSDTCTMTHEEELFEFCIEHDLLTLGWIHTHPSQTCFLSSVDIHTQCGFQAMLSEAIAIVVAPRDTKKNIGVFRLTMPHGLELIQNCNLTGFHEHPSNIEIYSDAVQLRWDSNRACKVVDMRK 422
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BLAST of jgi.p|Trimin1|171483 vs. uniprot
Match: T0QLM1_SAPDV (MPN domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QLM1_SAPDV)

HSP 1 Score: 158 bits (400), Expect = 2.070e-44
Identity = 72/125 (57.60%), Postives = 90/125 (72.00%), Query Frame = 1 
Query:  160 QTGSSDSCTATGEELVFSYMLEFKLITLGWIHTHPRQDCFMSSVDLHTHAGYQIMLPEAVAVVIAPTDAAKRVGVFRLEAPHGLRLILDCRLKGFHPHPTDVTIYGDA-RVEWDARAPLSVVDLR 531
            QTGSSD CT T EE +F Y +   L+TLGWIHTHP Q CF+SSVD+HT  G+Q ML EA+A+V+AP DA K +GVFRL +PHG+ LI +C L GFH HP+ + IY DA ++ W   A   VVD+R
Sbjct:  197 QTGSSDMCTMTHEEELFEYCIANDLLTLGWIHTHPSQTCFLSSVDIHTQCGFQSMLAEAIAIVVAPRDAQKSIGVFRLTSPHGMELIQNCSLSGFHEHPSHLEIYSDAMQIVWSRSATAQVVDMR 321
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BLAST of jgi.p|Trimin1|171483 vs. uniprot
Match: A0A8K1CH24_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CH24_PYTOL)

HSP 1 Score: 160 bits (405), Expect = 4.610e-44
Identity = 75/126 (59.52%), Postives = 90/126 (71.43%), Query Frame = 1 
Query:  160 QTGSSDSCTATGEELVFSYMLEFKLITLGWIHTHPRQDCFMSSVDLHTHAGYQIMLPEAVAVVIAPTDAAKRVGVFRLEAPHGLRLILDCRLKGFHPHPTDVTIYGDA-RVEWDARAPLSVVDLRK 534
            Q GSSD C+   EE +F Y     L+TLGWIHTHPRQ CF+SSVD+HT  G+Q +LPEAVA+VIAPTD  + VGVFRL  PHGL+LI +C L GFH HP  V IY DA    WDA+   +VVD+R+
Sbjct:  312 QEGSSDMCSMKNEEELFDYCFSHDLLTLGWIHTHPRQTCFLSSVDIHTQCGFQSILPEAVAIVIAPTDQQRNVGVFRLTEPHGLQLIQNCNLTGFHTHPERVQIYSDALECVWDAQTAPAVVDMRR 437
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BLAST of jgi.p|Trimin1|171483 vs. uniprot
Match: A0A485LV41_9STRA (Aste57867_25268 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LV41_9STRA)

HSP 1 Score: 160 bits (404), Expect = 7.250e-44
Identity = 72/126 (57.14%), Postives = 93/126 (73.81%), Query Frame = 1 
Query:  160 QTGSSDSCTATGEELVFSYMLEFKLITLGWIHTHPRQDCFMSSVDLHTHAGYQIMLPEAVAVVIAPTDAAKRVGVFRLEAPHGLRLILDCRLKGFHPHPTDVTIYGDA-RVEWDARAPLSVVDLRK 534
            Q GS+D+CT T EE +F + +   L+TLGWIHTHP Q CF+SSVD+HT  G+Q ML EA+A+V+AP D  K +GVFRL +PHGL LI +C L GFH HP++V IY DA +V WDA    +VVD+R+
Sbjct:  318 QQGSADTCTMTNEEDLFEFCIARDLLTLGWIHTHPSQTCFLSSVDIHTQCGFQSMLSEAIAIVVAPRDPQKNIGVFRLTSPHGLELIQNCNLTGFHEHPSNVEIYSDAMQVTWDAARTAAVVDMRR 443
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BLAST of jgi.p|Trimin1|171483 vs. uniprot
Match: A0A067C7Q3_SAPPC (MPN domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C7Q3_SAPPC)

HSP 1 Score: 158 bits (399), Expect = 3.720e-43
Identity = 72/125 (57.60%), Postives = 91/125 (72.80%), Query Frame = 1 
Query:  160 QTGSSDSCTATGEELVFSYMLEFKLITLGWIHTHPRQDCFMSSVDLHTHAGYQIMLPEAVAVVIAPTDAAKRVGVFRLEAPHGLRLILDCRLKGFHPHPTDVTIYGDA-RVEWDARAPLSVVDLR 531
            QTGSSD CT T EE +F Y +   L+TLGWIHTHP Q CF+SSVD+HT  G+Q ML EA+A+V+AP DA K +GVFRL +PHG+ LI +C L GFH HP+++ IY DA ++ W   A   VVD+R
Sbjct:  316 QTGSSDMCTMTHEEELFEYCIANDLLTLGWIHTHPSQTCFLSSVDIHTQCGFQSMLAEAIAIVVAPRDAQKSIGVFRLTSPHGMELIQNCSLSGFHEHPSNLEIYSDALQIVWSHAAHARVVDMR 440
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BLAST of jgi.p|Trimin1|171483 vs. uniprot
Match: A0A024U3I3_9STRA (MPN domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U3I3_9STRA)

HSP 1 Score: 157 bits (398), Expect = 6.500e-43
Identity = 70/126 (55.56%), Postives = 90/126 (71.43%), Query Frame = 1 
Query:  160 QTGSSDSCTATGEELVFSYMLEFKLITLGWIHTHPRQDCFMSSVDLHTHAGYQIMLPEAVAVVIAPTDAAKRVGVFRLEAPHGLRLILDCRLKGFHPHPTDVTIYGDA-RVEWDARAPLSVVDLRK 534
            Q G+SD+C  T EE +F+Y ++  L+TLGWIHTHP Q CF+SSVD+HT  G+Q ML EA+A+V+AP D  K VGVFRL  PHG+ LI +C L GFH HP++V IY DA  + WD      VVD+R+
Sbjct:  326 QEGTSDTCNMTHEEELFAYCIQHDLLTLGWIHTHPSQTCFLSSVDIHTQCGFQSMLSEAIAIVVAPRDPVKNVGVFRLTTPHGIELIQNCNLTGFHEHPSNVDIYSDAMHLTWDTHRHADVVDMRR 451
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|171483 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C7U4_9STRA6.220e-134100.00MPN domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6H5KVQ9_9PHAE3.520e-4864.52MPN domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S3XHL2_HETAK4.460e-4659.38Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A397B7M9_9STRA1.400e-4556.69MPN domain-containing protein n=6 Tax=Aphanomyces ... [more]
A0A6G0WED5_9STRA5.160e-4557.14MPN domain-containing protein n=1 Tax=Aphanomyces ... [more]
T0QLM1_SAPDV2.070e-4457.60MPN domain-containing protein n=1 Tax=Saprolegnia ... [more]
A0A8K1CH24_PYTOL4.610e-4459.52Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A485LV41_9STRA7.250e-4457.14Aste57867_25268 protein n=1 Tax=Aphanomyces stella... [more]
A0A067C7Q3_SAPPC3.720e-4357.60MPN domain-containing protein n=1 Tax=Saprolegnia ... [more]
A0A024U3I3_9STRA6.500e-4355.56MPN domain-containing protein n=1 Tax=Aphanomyces ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_82contigContig_82:605573..606801 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|171483|e_gw1.82.4.1
BRITEko00000,ko00001,ko01000,ko01002,ko04121,ko04131
KEGG Pathwayko04144,ko04622,map04144,map04622
KEGG koko:K11866,ko:K11867,ko:K12655
EC3.4.19.12
GOsGO:0000278,GO:0000281,GO:0000910,GO:0003674,GO:0003824,GO:0004843,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005769,GO:0005829,GO:0005886,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006886,GO:0007034,GO:0007049,GO:0007154,GO:0007165,GO:0007259,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008270,GO:0008284,GO:0009056,GO:0009057,GO:0009966,GO:0009968,GO:0009987,GO:0010646,GO:0010648,GO:0010941,GO:0012505,GO:0014066,GO:0014067,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0016197,GO:0016579,GO:0016787,GO:0019538,GO:0019783,GO:0019904,GO:0019941,GO:0022402,GO:0023051,GO:0023052,GO:0023057,GO:0030163,GO:0031410,GO:0031593,GO:0031974,GO:0031981,GO:0031982,GO:0032153,GO:0032154,GO:0032155,GO:0032509,GO:0032511,GO:0033036,GO:0033365,GO:0034613,GO:0035556,GO:0035871,GO:0036211,GO:0036459,GO:0042127,GO:0042886,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043162,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043328,GO:0043412,GO:0043523,GO:0043524,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0045184,GO:0045324,GO:0046578,GO:0046580,GO:0046872,GO:0046907,GO:0046914,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051056,GO:0051058,GO:0051179,GO:0051234,GO:0051301,GO:0051603,GO:0051641,GO:0051649,GO:0051716,GO:0060548,GO:0061578,GO:0061640,GO:0065007,GO:0070011,GO:0070013,GO:0070530,GO:0070536,GO:0070646,GO:0070647,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0071985,GO:0072594,GO:0072665,GO:0072666,GO:0097696,GO:0097708,GO:0098590,GO:0101005,GO:0120113,GO:0140030,GO:0140096,GO:1901214,GO:1901215,GO:1901564,GO:1901565,GO:1901575,GO:1902531,GO:1902532,GO:1903047
Preferred nameSTAMBP
Descriptionmetallopeptidase activity
COG categoryI
Max annot lvl2759|Eukaryota
EggNOG OGsCOG1310@1|root,KOG2880@2759|Eukaryota
Evalue6.34e-49
Seed ortholog2880.D8LQD0
Hectar predicted targeting categoryother localisation
TranscriptId171805
TrackFilteredModels1
ProteinId171483
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171483gene_11001Tribonema minus UTEX_B_3156 geneContig_82 605573..606801 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171483Trimin1|171483|e_gw1.82.4.1Tribonema minus UTEX_B_3156 polypeptideContig_82 605573..606801 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11001_2exon_11001_2Tribonema minus UTEX_B_3156 exonContig_82 605573..605846 -
exon_11001_1exon_11001_1Tribonema minus UTEX_B_3156 exonContig_82 606530..606801 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11001CDS_11001Tribonema minus UTEX_B_3156 CDSContig_82 606530..606801 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11001 ID=mRNA_11001|Name=jgi.p|Trimin1|171483|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=546bp|location=Sequence derived from alignment at Contig_82:605573..606801- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGGCAGCGCCAAACAGGCCTGCCGCTGGCACTTTGCATACCCCCAG
TGTCTGCCACACTCAGCAGTATTCGTCGCCTGTCTCCGCCTGCCGCTGGC
ACTTTGCGTACCCCCAATGTCTGCCACACTCAGCAGTATGCGTCGCCTGT
CTCCGCCTGCAGACGGGCTCCAGCGACAGTTGTACCGCCACCGGCGAGGA
GCTGGTCTTCAGCTACATGCTCGAGTTCAAGCTCATCACGCTGGGCTGGA
TACACACGCATCCGCGGCAAGACTGCTTCATGAGCAGCGTGGACCTCCAC
ACGCACGCCGGCTACCAGATCATGCTCCCCGAGGCTGTCGCCGTAGTGAT
CGCGCCAACCGACGCCGCCAAGCGCGTCGGCGTCTTCCGTCTCGAGGCGC
CGCACGGACTGCGCCTCATCCTCGACTGCCGCCTGAAGGGGTTCCACCCG
CACCCCACGGATGTCACCATATACGGCGACGCGCGCGTGGAGTGGGACGC
ACGCGCGCCGCTGAGCGTTGTGGACCTGCGCAAGGCGGGCCGGTGA
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protein sequence of jgi.p|Trimin1|171483

>Trimin1|171483|e_gw1.82.4.1 ID=Trimin1|171483|e_gw1.82.4.1|Name=jgi.p|Trimin1|171483|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=182bp
MQAAPNRPAAGTLHTPSVCHTQQYSSPVSACRWHFAYPQCLPHSAVCVAC
LRLQTGSSDSCTATGEELVFSYMLEFKLITLGWIHTHPRQDCFMSSVDLH
THAGYQIMLPEAVAVVIAPTDAAKRVGVFRLEAPHGLRLILDCRLKGFHP
HPTDVTIYGDARVEWDARAPLSVVDLRKAGR*
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mRNA from alignment at Contig_82:605573..606801-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11001 ID=mRNA_11001|Name=jgi.p|Trimin1|171483|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1229bp|location=Sequence derived from alignment at Contig_82:605573..606801- (Tribonema minus UTEX_B_3156 )
ATGCAGGCAGCGCCAAACAGGCCTGCCGCTGGCACTTTGCATACCCCCAG
TGTCTGCCACACTCAGCAGTATTCGTCGCCTGTCTCCGCCTGCCGCTGGC
ACTTTGCGTACCCCCAATGTCTGCCACACTCAGCAGTATGCGTCGCCTGT
CTCCGCCTGCAGACGGGCTCCAGCGACAGTTGTACCGCCACCGGCGAGGA
GCTGGTCTTCAGCTACATGCTCGAGTTCAAGCTCATCACGCTGGGCTGGA
TACACACGCATCCGCGGCAAGAGTGAGTGCCGGGCCATCTCAATCGCACC
CATCACACTGAGCGCTGCCTTGGCGCAATCATCAGCACCGCTCAGCAGCA
TGTTCGTACACTGCTGGCAGCTCATACTGCCGCGGCATCGACCTGAGCGT
CCAGCTGTTCTGGTGCTTGAGCGCACGTGCTACAGTTTTTTTGTACATCG
TGCAGTTTCAGTTTGCTGCTGTAATCGAGGCACCTACCAGGTCATGCCGC
TCCGGAGGCCGCCATGTGTCAAATCTGGAGTTGAGCGGTGCTGCCGCCAC
GCACAATACCGCCATTGCTTTACTGCATCCCTACCCTCACACCTAATCAC
ACCCTTTACCCCCCTCTCTGTGCACTGCGCAGCTATTTCATGCGCAGCAC
GGACGTTCACGTGCACGCAGGCTACACACATACCAGGTCATGCTGCTTGG
GGCAACGGCCATCGTCACATTGCCGCCATCAATGCTGCGTGCCTACTCAC
TCCTCACCCCCGCCCCCTCTGCGCATTGCACAGCTGCTTCATCAGCAGCG
TGGACCCCCTCACCATTGCTTGCTACCACTTCATGCTGCCCGAGGCTGTC
GCTGCCATCATTGCACGAAAATCATGTGCTGACCTACTTACCTACCCTCA
TTAACCCCCATCCCCCCCCCCCCCCCCCCCCCCCGCCCACCGCTGCATTG
CGCAGCTGCTTCATGAGCAGCGTGGACCTCCACACGCACGCCGGCTACCA
GATCATGCTCCCCGAGGCTGTCGCCGTAGTGATCGCGCCAACCGACGCCG
CCAAGCGCGTCGGCGTCTTCCGTCTCGAGGCGCCGCACGGACTGCGCCTC
ATCCTCGACTGCCGCCTGAAGGGGTTCCACCCGCACCCCACGGATGTCAC
CATATACGGCGACGCGCGCGTGGAGTGGGACGCACGCGCGCCGCTGAGCG
TTGTGGACCTGCGCAAGGCGGGCCGGTGA
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Coding sequence (CDS) from alignment at Contig_82:605573..606801-

>mRNA_11001 ID=mRNA_11001|Name=jgi.p|Trimin1|171483|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=546bp|location=Sequence derived from alignment at Contig_82:605573..606801- (Tribonema minus UTEX_B_3156 )
ATGCAGGCAGCGCCAAACAGGCCTGCCGCTGGCACTTTGCATACCCCCAG
TGTCTGCCACACTCAGCAGTATTCGTCGCCTGTCTCCGCCTGCCGCTGGC
ACTTTGCGTACCCCCAATGTCTGCCACACTCAGCAGTATGCGTCGCCTGT
CTCCGCCTGCAGACGGGCTCCAGCGACAGTTGTACCGCCACCGGCGAGGA
GCTGGTCTTCAGCTACATGCTCGAGTTCAAGCTCATCACGCTGGGCTGGA
TACACACGCATCCGCGGCAAGACTGCTTCATGAGCAGCGTGGACCTCCAC
ACGCACGCCGGCTACCAGATCATGCTCCCCGAGGCTGTCGCCGTAGTGAT
CGCGCCAACCGACGCCGCCAAGCGCGTCGGCGTCTTCCGTCTCGAGGCGC
CGCACGGACTGCGCCTCATCCTCGACTGCCGCCTGAAGGGGTTCCACCCG
CACCCCACGGATGTCACCATATACGGCGACGCGCGCGTGGAGTGGGACGC
ACGCGCGCCGCTGAGCGTTGTGGACCTGCGCAAGGCGGGCCGGTGA
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