mRNA_9742 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|171242 vs. uniprot
Match: A0A835YME2_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YME2_9STRA) HSP 1 Score: 433 bits (1114), Expect = 6.810e-154 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 1
Query: 1 MDTAVCAPRAHNPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVSGLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFGVLIGEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQLYPSVISKKHADSRPGTASSTSSC 627
MDTAVCAPRAHNPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVSGLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFGVLIGEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQLYPSVISKKHADSRPGTASSTSSC
Sbjct: 1 MDTAVCAPRAHNPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVSGLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFGVLIGEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQLYPSVISKKHADSRPGTASSTSSC 209
BLAST of jgi.p|Trimin1|171242 vs. uniprot
Match: A0A7S3Y1Y7_HETAK (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1Y7_HETAK) HSP 1 Score: 189 bits (480), Expect = 1.310e-57 Identity = 99/181 (54.70%), Postives = 119/181 (65.75%), Query Frame = 1
Query: 22 PRAHNPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVSGLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFGVLIGEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQLYP 564
PR N I++ D+ I G AGR ELRADIAP ENF+ LITGERGI+ + V L Y G++FHRI D I GGD+ DGTGR+S F DENF LRHTGPGVLS CNSGPD+N S F +TLV+ PWLDG+ VVFG L+ + S L + + G D GRP V+V CGQL+P
Sbjct: 19 PRHLNNIMYFDMTIDGEDAGRLTFELRADIAPKTCENFKALITGERGITE-DGVKLSYEGSVFHRIVKDYLIQGGDIVNQDGTGRLSSFGEP--FEDENFILRHTGPGVLSMCNSGPDSNGSQFFITLVETPWLDGRHVVFGCLVDQPSLDTLAKIEQVGHD-CGRPSRTVVVARCGQLFP 195
BLAST of jgi.p|Trimin1|171242 vs. uniprot
Match: A0A1Z3HTG9_9CYAN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Halomicronema hongdechloris C2206 TaxID=1641165 RepID=A0A1Z3HTG9_9CYAN) HSP 1 Score: 181 bits (459), Expect = 1.030e-54 Identity = 97/178 (54.49%), Postives = 118/178 (66.29%), Query Frame = 1
Query: 34 NPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVS--GLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFG-VLIGEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQL 558
NP VF DI I G+PAGR VIELR D+ P AENFR L TGE+G A+ K PL ++G+ FHRI PD GGD +G+GTG S G T F DENF L+HTGPG+LS N+GP TN S F +T V PWLDGK VVFG V+ G + K ++AV G G+P+ PV++ DCGQL
Sbjct: 6 NPQVFFDITIGGQPAGRIVIELRTDVTPQTAENFRALCTGEQGTGASGK-PLHFKGSSFHRIIPDFMCQGGDFTRGNGTGGESIYGRT----FADENFELKHTGPGILSMANAGPGTNGSQFFLTTVATPWLDGKHVVFGHVVEGMDVVKRMEAV----GSSSGKPRQPVVIADCGQL 174
BLAST of jgi.p|Trimin1|171242 vs. uniprot
Match: A0A2P8WER6_9CYAN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=filamentous cyanobacterium CCP5 TaxID=2107701 RepID=A0A2P8WER6_9CYAN) HSP 1 Score: 179 bits (454), Expect = 6.060e-54 Identity = 96/180 (53.33%), Postives = 117/180 (65.00%), Query Frame = 1
Query: 28 AHNPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVS--GLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFGVLI-GEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQL 558
A NP VF DI I G+PAGR V+EL+AD P AENFR L TGE+G + K PL Y+G+ FHR+ PD GGD +G+GTG S G T F DENF L+HTGPG+LS N+GP TN S F +T V PWLDGK VVFG ++ G + KA++AV G GR PV++ DCGQL
Sbjct: 4 ATNPKVFFDITIGGQPAGRIVMELKADTVPKTAENFRALCTGEKGTGVSGK-PLHYKGSAFHRVIPDFMCQGGDFTRGNGTGGESIYGRT----FEDENFQLKHTGPGILSMANAGPGTNGSQFFLTTVKTPWLDGKHVVFGEVVEGMDVVKAMEAV---GSSPSGRTSQPVVIADCGQL 175
BLAST of jgi.p|Trimin1|171242 vs. uniprot
Match: A0A7S2GBA6_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GBA6_9STRA) HSP 1 Score: 179 bits (455), Expect = 2.140e-53 Identity = 91/182 (50.00%), Postives = 118/182 (64.84%), Query Frame = 1
Query: 25 RAHNPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVSGL--TAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFGVLIGEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQLYP 564
R+ NPIV++DI+I P+GR +IELRAD+ P AAENFR L TGE + + ++GT+FHRI D GGD+ +GDGT S A+ LF DENF LRHTGPGVLS NSGPDTN S F ++ V+ W+D VVFG + ++S L + R G + GRP+ PV++ D GQLYP
Sbjct: 48 RSLNPIVYLDISIGNEPSGRLMIELRADLVPRAAENFRSLCTGEHP-KHKDGTAMHFKGTMFHRIVKDSLCQGGDLSQGDGTWSASVFRDNADCLFADENFILRHTGPGVLSMANSGPDTNGSQFYLSFVETAWMDEHHVVFGCVCNQDSLTVLYDIERQG-SQSGRPRQPVVIADSGQLYP 227
BLAST of jgi.p|Trimin1|171242 vs. uniprot
Match: A0A8J6RH24_9CYAN (Peptidyl-prolyl cis-trans isomerase n=4 Tax=Cyanobacteria/Melainabacteria group TaxID=1798711 RepID=A0A8J6RH24_9CYAN) HSP 1 Score: 172 bits (435), Expect = 4.430e-51 Identity = 91/178 (51.12%), Postives = 116/178 (65.17%), Query Frame = 1
Query: 28 AHNPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVSGLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFGVLI-GEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQL 558
A NP VF DI I G PAGR V+ELRAD+ P AENFR L TGE+G+ + K PL ++G+ FHRI P+ GGD +G+GTG S + F DENFTL+HT PG+LS N+GP+TN S F +T V PWLDGK VVFG ++ G + A++ V G G+ PV++ DCGQL
Sbjct: 4 ATNPRVFFDITIGGTPAGRIVMELRADVTPKTAENFRALCTGEQGMGTSGK-PLHFKGSSFHRIIPEFMCQGGDFTRGNGTGGESIYGMK--FADENFTLKHTTPGLLSMANAGPNTNGSQFFLTTVATPWLDGKHVVFGSVVEGMDVVSAMEQV----GSRSGQTSEPVVIADCGQL 174
BLAST of jgi.p|Trimin1|171242 vs. uniprot
Match: A0A2T2W7R5_9CYAN (Peptidyl-prolyl cis-trans isomerase n=16 Tax=Cyanobacteria TaxID=1117 RepID=A0A2T2W7R5_9CYAN) HSP 1 Score: 172 bits (435), Expect = 4.430e-51 Identity = 91/178 (51.12%), Postives = 116/178 (65.17%), Query Frame = 1
Query: 28 AHNPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVSGLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFGVLI-GEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQL 558
A NP VF DI I G PAGR V+ELRAD+AP AENFR L TGE+G+ + VPL ++G+ FHRI P+ GGD +G+GTG S + F DENFTL+HT PG+LS N+GP+TN S F +T V PWLDGK VVFG ++ G + ++ V G G+ PV++ DCGQL
Sbjct: 4 ATNPRVFFDITIGGTPAGRIVMELRADVAPKTAENFRALCTGEKGMGTSG-VPLHFKGSSFHRIIPEFMCQGGDFTRGNGTGGESIYGMK--FADENFTLKHTTPGLLSMANAGPNTNGSQFFLTTVATPWLDGKHVVFGSVVEGMDVVSTMEQV----GSRSGQTSEPVVIADCGQL 174
BLAST of jgi.p|Trimin1|171242 vs. uniprot
Match: UPI001684B3C2 (peptidylprolyl isomerase n=1 Tax=Pseudanabaena sp. FACHB-2040 TaxID=2692859 RepID=UPI001684B3C2) HSP 1 Score: 169 bits (429), Expect = 3.590e-50 Identity = 89/178 (50.00%), Postives = 117/178 (65.73%), Query Frame = 1
Query: 34 NPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVS--GLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFGVLI-GEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQL 558
NP VF D+ I G+PAGR V+ELRAD+ P AENFR L TGE+G ++ K PL Y+G+ FHR+ P+ GGD +G+GTG S G T F DENF L+HT PG+LS N+GP TN S F +T V+ PWLDGK VVFG ++ G + +A++ V G G+ + V++ DCGQL
Sbjct: 6 NPKVFFDVTIGGQPAGRIVMELRADVVPETAENFRALCTGEKGTGSSGK-PLHYKGSSFHRVIPNFMCQGGDFTQGNGTGGESIYGRT----FADENFQLKHTTPGLLSMANAGPGTNGSQFFLTTVETPWLDGKHVVFGAVVEGMDVVRAIEQV----GTPSGKTRQSVVIADCGQL 174
BLAST of jgi.p|Trimin1|171242 vs. uniprot
Match: A0A812VDW2_9DINO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812VDW2_9DINO) HSP 1 Score: 171 bits (433), Expect = 4.620e-50 Identity = 89/176 (50.57%), Postives = 115/176 (65.34%), Query Frame = 1
Query: 34 NPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVSGLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFG-VLIGEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQL 558
P+VF D++I G PAGR +ELRAD+AP AENFR L TGE+G + K PL ++G+ FHR+ PD GGD G+GTG S ++ F DENFTL+HTGPG+LS N+GP+TN S F + V WLDGK VVFG V G + K ++AV G + G+ PV++ DCGQL
Sbjct: 59 KPVVFFDMSIGGTPAGRITMELRADVAPKTAENFRALCTGEKGTGKSGK-PLHFKGSAFHRVIPDFMCQGGDFTAGNGTGGESIYGSK--FADENFTLKHTGPGILSMANAGPNTNGSQFFLCTVKTQWLDGKHVVFGSVTDGMDVVKKIEAV----GSQSGKTSKPVVIADCGQL 227
BLAST of jgi.p|Trimin1|171242 vs. uniprot
Match: A0A8B7BTP3_PHODC (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B7BTP3_PHODC) HSP 1 Score: 169 bits (428), Expect = 4.920e-50 Identity = 89/178 (50.00%), Postives = 113/178 (63.48%), Query Frame = 1
Query: 28 AHNPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVSGLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFG-VLIGEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQL 558
A NP+V++D+ I G PAGR VIEL AD+ P AENFR L TGE+G+ + K PL Y+G FHR+ P GGD G+GTG S + F DENF +HTGPGV+S NSGP+TN S F + PWLDG+ VVFG V+ G + +A++ V G +GGR PV + DCGQL
Sbjct: 2 ASNPMVYLDVTINGVPAGRIVIELFADVTPKTAENFRALCTGEKGLGRSGK-PLHYKGCPFHRVIPGFVSQGGDFTAGNGTGGXSIYGGK--FADENFVKKHTGPGVVSMANSGPNTNGSQFFICTTKTPWLDGRHVVFGHVVDGMDVVRAMEEV----GSQGGRTSEPVAIADCGQL 172 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|171242 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9742 ID=mRNA_9742|Name=jgi.p|Trimin1|171242|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=630bp|location=Sequence derived from alignment at Contig_81:166284..166913- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGACACCGCCGTCTGCGCGCCGCGCGCCCACAACCCCATCGTCTTCATback to top protein sequence of jgi.p|Trimin1|171242 >Trimin1|171242|e_gw1.81.30.1 ID=Trimin1|171242|e_gw1.81.30.1|Name=jgi.p|Trimin1|171242|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=210bp MDTAVCAPRAHNPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITback to top mRNA from alignment at Contig_81:166284..166913- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9742 ID=mRNA_9742|Name=jgi.p|Trimin1|171242|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=630bp|location=Sequence derived from alignment at Contig_81:166284..166913- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_81:166284..166913- >mRNA_9742 ID=mRNA_9742|Name=jgi.p|Trimin1|171242|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=630bp|location=Sequence derived from alignment at Contig_81:166284..166913- (Tribonema minus UTEX_B_3156 )back to top |