Trimin1|351019|estExt_Genemark1.C_Ctg_780039 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351019
Unique NameTrimin1|351019|estExt_Genemark1.C_Ctg_780039
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length233
Homology
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BLAST of jgi.p|Trimin1|351019 vs. uniprot
Match: A0A835YTB8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTB8_9STRA)

HSP 1 Score: 419 bits (1077), Expect = 1.740e-147
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0 
Query:    1 MRHTTGTIAMIGTSTLDSRVGKALSGIEQTLVQAIQEQAALVAKLEEVNAALTQVTQAVMQSTAEVKDASATQLAAILGFYGYTWVAQAAVDPQTDQWKRQARETEAKKQRSDMADFLLRVLCIRCDDGGAAAAPHVFCALVWAVAHAAPQALWLRHALVVLPLWARRGAPALWQGLPLVRHAATPRAAAPPFAVXXXQAAAGRSPATAAARCVYGVVLPXXXXVLLVWAPP 232
            MRHTTGTIAMIGTSTLDSRVGKALSGIEQTLVQAIQEQAALVAKLEEVNAALTQVTQAVMQSTAEVKDASATQLAAILGFYGYTWVAQAAVDPQTDQWKRQARETEAKKQRSDMADFLLRVLCIRCDDGGAAAAPHVFCALVWAVAHAAPQALWLRHALVVLPLWARRGAPALWQGLPLVRHAATPRAAAPPFAVXXXQAAAGRSPATAAARCVYGVVLPXXXXVLLVWAPP
Sbjct:    1 MRHTTGTIAMIGTSTLDSRVGKALSGIEQTLVQAIQEQAALVAKLEEVNAALTQVTQAVMQSTAEVKDASATQLAAILGFYGYTWVAQAAVDPQTDQWKRQARETEAKKQRSDMADFLLRVLCIRCDDGGAAAAPHVFCALVWAVAHAAPQALWLRHALVVLPLWARRGAPALWQGLPLVRHAATPRAAAPPFAVXXXQAAAGRSPATAAARCVYGVVLPXXXXVLLVWAPP 232
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351019 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YTB8_9STRA1.740e-147100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_78contigContig_78:457196..462037 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351019mRNA_12536Tribonema minus UTEX_B_3156 mRNAContig_78 457016..462037 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351019|estExt_Genemark1.C_Ctg_780039 ID=Trimin1|351019|estExt_Genemark1.C_Ctg_780039|Name=jgi.p|Trimin1|351019|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=233bp
MRHTTGTIAMIGTSTLDSRVGKALSGIEQTLVQAIQEQAALVAKLEEVNA
ALTQVTQAVMQSTAEVKDASATQLAAILGFYGYTWVAQAAVDPQTDQWKR
QARETEAKKQRSDMADFLLRVLCIRCDDGGAAAAPHVFCALVWAVAHAAP
QALWLRHALVVLPLWARRGAPALWQGLPLVRHAATPRAAAPPFAVAAPQA
AAGRSPATAAARCVYGVVLPPPPPVLLVWAPP*
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