mRNA_12499 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|351002
Unique NamemRNA_12499
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|351002 vs. uniprot
Match: A0A835YN30_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN30_9STRA)

HSP 1 Score: 249 bits (637), Expect = 3.110e-82
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 3 
Query:  117 MADMDKRRTGRLPPEVNRILYVRNLPFKITADEMYDIFGKYGAIRQIRLGDKPDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQSTKALKRVDEMKKRREIEEIKAKFGVGGEAAAI 491
            MADMDKRRTGRLPPEVNRILYVRNLPFKITADEMYDIFGKYGAIRQIRLGDKPDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQSTKALKRVDEMKKRREIEEIKAKFGVGGEAAAI
Sbjct:    1 MADMDKRRTGRLPPEVNRILYVRNLPFKITADEMYDIFGKYGAIRQIRLGDKPDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQSTKALKRVDEMKKRREIEEIKAKFGVGGEAAAI 125
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BLAST of jgi.p|Trimin1|351002 vs. uniprot
Match: A0A7S2C985_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C985_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.370e-62
Identity = 97/122 (79.51%), Postives = 110/122 (90.16%), Query Frame = 3 
Query:  114 TMADMDKRRTGRLPPEVNRILYVRNLPFKITADEMYDIFGKYGAIRQIRLGDKPDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQSTKALKRVDEMKKRREIEEIKAKFGVGGE 479
            + AD+  +R GRLPPEVNR+LY+RNLPFKIT++EMYDIFGKYGAIRQIR+GDKPDTRGTAFVVYEDIYDAK AVDHLSGFNVCGRYLIVLYYQ+ +  KR+D  KKRRE+EE+KAKF V GE
Sbjct:    2 SQADLAAKR-GRLPPEVNRVLYIRNLPFKITSEEMYDIFGKYGAIRQIRVGDKPDTRGTAFVVYEDIYDAKNAVDHLSGFNVCGRYLIVLYYQAARMEKRIDNDKKRRELEELKAKFNVSGE 122
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BLAST of jgi.p|Trimin1|351002 vs. uniprot
Match: A0A7S2DAY0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DAY0_9STRA)

HSP 1 Score: 194 bits (492), Expect = 3.800e-60
Identity = 93/124 (75.00%), Postives = 107/124 (86.29%), Query Frame = 3 
Query:  117 MADMDKRRTGRLPPEVNRILYVRNLPFKITADEMYDIFGKYGAIRQIRLGDKPDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQSTKALKRVDEMKKRREIEEIKAKFGVGGEAAA 488
            MA   KR   RLPPEVNR+LYVRNLPFKIT++EMYDIFGKYGAIRQIR+GDKPDTRGTAFVVYEDIYDAK AVDHLSGFNVCGRYL+VLYYQ+++  KR+D  KKR+E+EE+K K+ V  +  A
Sbjct:    4 MATGGKRGNARLPPEVNRVLYVRNLPFKITSEEMYDIFGKYGAIRQIRVGDKPDTRGTAFVVYEDIYDAKNAVDHLSGFNVCGRYLVVLYYQASRMQKRMDNDKKRKELEELKQKYNVSADEVA 127
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BLAST of jgi.p|Trimin1|351002 vs. uniprot
Match: A0A6S9GFW4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GFW4_HETAK)

HSP 1 Score: 191 bits (484), Expect = 5.650e-59
Identity = 89/112 (79.46%), Postives = 104/112 (92.86%), Query Frame = 3 
Query:  129 DKRRTGRLPPEVNRILYVRNLPFKITADEMYDIFGKYGAIRQIRLGDKPDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQSTKALKRVDEMKKRREIEEIKAKF 464
            ++R   RLPPEVNR+LYVRNLPFKITA+EMYDIFGKYGAIRQIR+GDKPDT+GTAFVVYEDIYDAK AVDHLSGFNVCGRYLIVLYYQ T+  K++D+ ++RRE+EE+KAK+
Sbjct:    6 NRRANARLPPEVNRVLYVRNLPFKITAEEMYDIFGKYGAIRQIRIGDKPDTKGTAFVVYEDIYDAKNAVDHLSGFNVCGRYLIVLYYQPTRMAKKMDQERERRELEELKAKY 117
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BLAST of jgi.p|Trimin1|351002 vs. uniprot
Match: A0A7S2S8J7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8J7_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.890e-58
Identity = 87/119 (73.11%), Postives = 107/119 (89.92%), Query Frame = 3 
Query:  132 KRRTGRLPPEVNRILYVRNLPFKITADEMYDIFGKYGAIRQIRLGDKPDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQSTKALKRVDEMKKRREIEEIKAKFGVGGEAAA 488
            +R   RLPPEVNR++YVRNLPFKI+A+E+YDIFGKYGA+RQ+RLGDKPDTRGTAFVVYEDIYDAK AVDHL+GFNVCGRYL+VLYYQ++K  +R+D  +KR+E+EE+K K+ +  EAAA
Sbjct:   11 RRGNARLPPEVNRVVYVRNLPFKISAEEIYDIFGKYGALRQVRLGDKPDTRGTAFVVYEDIYDAKNAVDHLNGFNVCGRYLVVLYYQASKMQERIDNQRKRQELEELKKKYNIQTEAAA 129
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BLAST of jgi.p|Trimin1|351002 vs. uniprot
Match: A0A1B6C7B8_9HEMI (RRM domain-containing protein n=4 Tax=Arthropoda TaxID=6656 RepID=A0A1B6C7B8_9HEMI)

HSP 1 Score: 189 bits (479), Expect = 3.040e-58
Identity = 90/121 (74.38%), Postives = 105/121 (86.78%), Query Frame = 3 
Query:  117 MADMDKRRTGRLPPEVNRILYVRNLPFKITADEMYDIFGKYGAIRQIRLGDKPDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQSTKALKRVDEMKKRREIEEIKAKFGVGGE 479
            MA M +R   RLPPEVNR+LY+RNLP+KITA+EMYDIFGKYGAIRQIR+G+ PDTRGTAFVVYEDI+DAK A DHLSGFNVC RYL+VLYYQ+ KA KRVD  KK+ EIE++K K+G+G E
Sbjct:    1 MAMMQRRANVRLPPEVNRVLYIRNLPYKITAEEMYDIFGKYGAIRQIRVGNTPDTRGTAFVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYQANKAFKRVDVDKKKEEIEKVKTKYGLGEE 121
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BLAST of jgi.p|Trimin1|351002 vs. uniprot
Match: A0A482WYA4_LAOST (RRM domain-containing protein n=5 Tax=Auchenorrhyncha TaxID=1955247 RepID=A0A482WYA4_LAOST)

HSP 1 Score: 186 bits (472), Expect = 3.510e-57
Identity = 88/121 (72.73%), Postives = 104/121 (85.95%), Query Frame = 3 
Query:  117 MADMDKRRTGRLPPEVNRILYVRNLPFKITADEMYDIFGKYGAIRQIRLGDKPDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQSTKALKRVDEMKKRREIEEIKAKFGVGGE 479
            MA M +R   RLPPEVNR+LY+RNLP+KITA+EMYDIFGKYGAIRQIR+G+ PDTRGTAFVVYEDI+DAK A DHLSGFNVC RYL+VLYYQ+ KA KRVD  KK+ E+E++K K+G+  E
Sbjct:    1 MAMMQRRANVRLPPEVNRVLYIRNLPYKITAEEMYDIFGKYGAIRQIRVGNTPDTRGTAFVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYQANKAFKRVDVDKKKDELEKVKTKYGINDE 121
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BLAST of jgi.p|Trimin1|351002 vs. uniprot
Match: UPI0008F9A0EF (splicing factor 3B subunit 6-like protein n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9A0EF)

HSP 1 Score: 186 bits (472), Expect = 3.630e-57
Identity = 88/118 (74.58%), Postives = 103/118 (87.29%), Query Frame = 3 
Query:  117 MADMDKRRTGRLPPEVNRILYVRNLPFKITADEMYDIFGKYGAIRQIRLGDKPDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQSTKALKRVDEMKKRREIEEIKAKFGV 470
            MA M +R + RLPPEVNR+LY+RNLP+KITA+EMYDIFGKYGAIRQIR+G  PDTRGTAFVVYEDI+DAK A DHLSGFNVC RYL+VLYYQS KA K+VD  KK+ EIE++K K+G+
Sbjct:    1 MAMMQRRASVRLPPEVNRVLYIRNLPYKITAEEMYDIFGKYGAIRQIRVGSTPDTRGTAFVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYQSNKAFKKVDVDKKKEEIEKVKTKYGI 118
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BLAST of jgi.p|Trimin1|351002 vs. uniprot
Match: A0A7R9BDY3_9CRUS (Hypothetical protein n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BDY3_9CRUS)

HSP 1 Score: 188 bits (478), Expect = 4.920e-57
Identity = 87/117 (74.36%), Postives = 105/117 (89.74%), Query Frame = 3 
Query:  126 MDKRRTGRLPPEVNRILYVRNLPFKITADEMYDIFGKYGAIRQIRLGDKPDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQSTKALKRVDEMKKRREIEEIKAKFGVGG 476
            M K+ T RLPPEVNR+LYVRNLP+KI+ DEMYDIFGKYGAIRQIR+G+ P+TRGTAFVVYEDI+DAK+A DHLSGFNVCGRYL+VLYYQ+ KA KR+D  +KR ++E++KAKF +GG
Sbjct:   77 MQKKNTVRLPPEVNRVLYVRNLPYKISGDEMYDIFGKYGAIRQIRVGNTPETRGTAFVVYEDIFDAKSACDHLSGFNVCGRYLVVLYYQANKAFKRMDSDQKREDLEKVKAKFNLGG 193
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BLAST of jgi.p|Trimin1|351002 vs. uniprot
Match: D7G0W6_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W6_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 1.000e-56
Identity = 90/119 (75.63%), Postives = 101/119 (84.87%), Query Frame = 3 
Query:  147 RLPPEVNRILYVRNLPFKITADEMYDIFGKYGAIRQIRLGDKPDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQSTKALKRVDEMKKRREIEEIKAKFGVGGEAAAI*GVP 503
            RLPPEVNR +YVRNLPFKI+ADEMYDIFGKYGAIRQIRLGD+ DTRGTAFVVY+DIYDAKAAVDHLSGFNVCGRYLIVLYYQ  K  KR+D+  K++E+EE++AK  V  E  A    P
Sbjct:    2 RLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYDDIYDAKAAVDHLSGFNVCGRYLIVLYYQPAKMAKRMDQQAKKKELEELRAKLKVAREEDAAGDTP 120
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351002 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YN30_9STRA3.110e-82100.00RRM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2C985_9STRA1.370e-6279.51Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2DAY0_9STRA3.800e-6075.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6S9GFW4_HETAK5.650e-5979.46Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2S8J7_9STRA1.890e-5873.11Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1B6C7B8_9HEMI3.040e-5874.38RRM domain-containing protein n=4 Tax=Arthropoda T... [more]
A0A482WYA4_LAOST3.510e-5772.73RRM domain-containing protein n=5 Tax=Auchenorrhyn... [more]
UPI0008F9A0EF3.630e-5774.58splicing factor 3B subunit 6-like protein n=1 Tax=... [more]
A0A7R9BDY3_9CRUS4.920e-5774.36Hypothetical protein n=1 Tax=Notodromas monacha Ta... [more]
D7G0W6_ECTSI1.000e-5675.63RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_77contigContig_77:659323..661535 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|351002|estExt_Genemark1.C_Ctg_770060
BRITEko00000,ko00001,ko00002,ko03041
KEGG ModuleM00352
KEGG Pathwayko03040,map03040
KEGG koko:K12833
GOsGO:0000375,GO:0000377,GO:0000398,GO:0001701,GO:0001824,GO:0001825,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005686,GO:0005689,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008380,GO:0009653,GO:0009790,GO:0009792,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0030532,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0048646,GO:0048856,GO:0070013,GO:0071011,GO:0071013,GO:0071704,GO:0090304,GO:0097159,GO:0097525,GO:0120114,GO:1901360,GO:1901363,GO:1902494,GO:1990904
Preferred nameSF3B6
Descriptionnucleic acid binding
COG categoryA
Max annot lvl33208|Metazoa
EggNOG OGsKOG0114@1|root,KOG0114@2759|Eukaryota,3A2RK@33154|Opisthokonta,3BQBW@33208|Metazoa,3D79E@33213|Bilateria,41ZKG@6656|Arthropoda,3SMIP@50557|Insecta
Evalue4.28e-59
Seed ortholog136037.KDR13454
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRNA recognition motif domain
Ec32 orthologEc-23_002040.1
TranscriptId351324
TrackFilteredModels1
ProteinId351002
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351002gene_12499Tribonema minus UTEX_B_3156 geneContig_77 659323..661535 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351002Trimin1|351002|estExt_Genemark1.C_Ctg_770060Tribonema minus UTEX_B_3156 polypeptideContig_77 659505..661419 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12499_3exon_12499_3Tribonema minus UTEX_B_3156 exonContig_77 659323..659707 -
exon_12499_2exon_12499_2Tribonema minus UTEX_B_3156 exonContig_77 660106..660212 -
exon_12499_1exon_12499_1Tribonema minus UTEX_B_3156 exonContig_77 661352..661535 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_12499UTR3_12499Tribonema minus UTEX_B_3156 three_prime_UTRContig_77 659323..659504 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12499CDS_12499Tribonema minus UTEX_B_3156 CDSContig_77 661352..661419 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_12499UTR5_12499Tribonema minus UTEX_B_3156 five_prime_UTRContig_77 661420..661535 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12499 ID=mRNA_12499|Name=jgi.p|Trimin1|351002|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=676bp|location=Sequence derived from alignment at Contig_77:659323..661535- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CTCAGGCTAGGGGAGGGAGCTGCTGCTGGTTTTGAAAGGAAAGGGCAGGC
TGTTGACTCTGTATTGAAAGCGAACAAAGTCTAGCTTAGGCCGCGGGCAA
CACTCGGACCAAAACTATGGCTGACATGGACAAAAGGCGGACAGGGCGGC
TGCCTCCGGAGGTCAATCGAATACTCTACGTCAGGAACCTGCCGTTCAAG
ATCACGGCGGATGAAATGTACGACATCTTCGGGAAGTACGGCGCGATTCG
GCAAATACGCCTGGGCGACAAGCCGGACACGAGGGGCACAGCCTTTGTCG
TGTACGAAGACATCTACGACGCCAAGGCGGCAGTCGACCACCTCTCCGGC
TTTAACGTGTGCGGCCGCTACCTCATCGTCCTCTACTACCAGTCCACCAA
GGCGCTCAAGCGCGTGGACGAGATGAAGAAGCGGCGGGAGATCGAGGAGA
TCAAGGCTAAATTCGGCGTCGGCGGCGAGGCCGCCGCCATTTGAGGCGTG
CCACAAACACACCAATGTACATATACCTACCCTATGAGCCGGGGCTGTCT
TGCATACTGCTTTCTGCTGCTGTTGGGCTGGTTGATGTCTGTCCTCTGCT
GCGCGCAGGATCAAGCCCAAGTTTGGCGTGGGGGGCGAGGCCGCGGCCAC
CTGATCCGCGCCACGCGTCAATGTAC
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protein sequence of jgi.p|Trimin1|351002

>Trimin1|351002|estExt_Genemark1.C_Ctg_770060 ID=Trimin1|351002|estExt_Genemark1.C_Ctg_770060|Name=jgi.p|Trimin1|351002|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=126bp
MADMDKRRTGRLPPEVNRILYVRNLPFKITADEMYDIFGKYGAIRQIRLG
DKPDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQSTKALKRV
DEMKKRREIEEIKAKFGVGGEAAAI*
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mRNA from alignment at Contig_77:659323..661535-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12499 ID=mRNA_12499|Name=jgi.p|Trimin1|351002|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2213bp|location=Sequence derived from alignment at Contig_77:659323..661535- (Tribonema minus UTEX_B_3156 )
CTCAGGCTAGGGGAGGGAGCTGCTGCTGGTTTTGAAAGGAAAGGGCAGGC
TGTTGACTCTGTATTGAAAGCGAACAAAGTCTAGCTTAGGCCGCGGGCAA
CACTCGGACCAAAACTATGGCTGACATGGACAAAAGGCGGACAGGGCGGC
TGCCTCCGGAGGTCAATCGAATACTCTACGTCAGGTGAGTAATGAAGGTC
ATGGCTGGCCAACTGATTATTATGTTGCCGGCGCGGCCATAGTGAAAGTT
TGAGGGTGCGAACACCATCTTGGCAATAGTGGATCCTCTCGCTCAGCTTA
CTCTGTTAATTCTGGAAAAACTATTACCTGGTCTGAAATATGCTACATTG
GCTTGCTTTAGGGTAGTTTGCGTCTATCAGCTCCCAGATTGTTGTTTTTC
ATGCCGCACTCACTGGCATCGCAAGCGAACACATTAGCGGCGGCATCGCC
AGCCAACACACAGCCATGGCAGCAGCAGTACTGTAGCAGCAACCTTATTT
GCTGCATAGGGCATGTGCAATCTTCCATGCTCCTAGTGTGCTGTCGCATA
TGCGGTCTGCTCATGGTCTATTGAGCCTTGTGCAGCGCATTAACTTATCG
TTGGCGCAAGCACCCTGCGCAGGGGCTTGTCATGGAGAGGAGTGTGTTAG
CACTGCTGCTACAGCAAGCCATCATATTTCATGAGCGCCCAGGCTTTGGG
GTGTGTGGGGTCGTTCATTGTTTCCAGAGCAGCTGGACACAGACTTGCAA
TCGCCACAAGTGAAGGGCCGCCTGCAGTCGCCCTCGACCGCAGCACTTTA
CCAGCACAACCCAGGTTCAGCTGTAATGCATCCACAGTCATTGGAATTCT
GATGCAGAGACATAGTGAGCAGCGCTTTTGGCAGAGAGGCTTGTCAAAAC
CCGTCGGTGACTTCTGGACAAGCTGAACACCGCATTTCCCATGAGCAGAA
GCAATTATTGCGGCTCGGCAGTGGTGCTTCGCTGCTTCCACATCTTTCTC
AGTTGCCCTATACGCGCTTGTGCCTCATGCGGAGCGCTCATTGACCCCTC
ATCACAGCCTACGCGAGGTGCACCAGCACTCTGTCACTATTGAAACCAAT
GCAGGATGCTCTTGGAACCGCGCTCCCAGTGCTCCCGATGTTCACCGGGC
GTATTTGTGTTTTCCATGGTCGTCAGAACTCATCTTGGATTACAGGATGC
GTTTGGAACAGCGCTCCAAGTGCTGGGCTGGGTCCCAATGCTGCTCACTA
GCGCACTAGCATGTCTTCTCGGTCATCAAAAGTTATGTCGAATCACCGCA
CTGCGCCGCTGCGCTCTTCGCAGGAACCTGCCGTTCAAGATCACGGCGGA
TGAAATGTACGACATCTTCGGGAAGTACGGCGCGATTCGGCAAATACGCC
TGGGCGACAAGCCGGACACGAGGGGCACAGGTGCGTCTCCTCTTGAAGTT
CCCTGAGCCATGCACTCAGAACTCTATTGATGCAGGCGCATGTTGTCACG
TTTGAAGTTTGAAGTTTGCCGCCACATCAGTGCTCAGCATGGTTGTATCG
TAGGTGGTAGTCAGCATAGTTATATTGTATCGGTGCTCGGCATGGTTGTA
GTGTCAGACACGACTCAGACTCCAGTCTCGCTCTCGTGCTGCTGCGCTGC
TCACGGCAGCAGCACGCAGGTGTTGCACGCCGCCGAGTGCGTCAGCCATC
TCGTGCAGACCTTCACAGTCGCGCACAAGTGCTATGCCGCATCCCGCTTC
GTCGCGCTATTGCGACTGTACATCAACTCCTTGTTACGAGGCACGCATCT
CACTTCCACCGTCGCGCCCCGCACGCAGCCTTTGTCGTGTACGAAGACAT
CTACGACGCCAAGGCGGCAGTCGACCACCTCTCCGGCTTTAACGTGTGCG
GCCGCTACCTCATCGTCCTCTACTACCAGTCCACCAAGGCGCTCAAGCGC
GTGGACGAGATGAAGAAGCGGCGGGAGATCGAGGAGATCAAGGCTAAATT
CGGCGTCGGCGGCGAGGCCGCCGCCATTTGAGGCGTGCCACAAACACACC
AATGTACATATACCTACCCTATGAGCCGGGGCTGTCTTGCATACTGCTTT
CTGCTGCTGTTGGGCTGGTTGATGTCTGTCCTCTGCTGCGCGCAGGATCA
AGCCCAAGTTTGGCGTGGGGGGCGAGGCCGCGGCCACCTGATCCGCGCCA
CGCGTCAATGTAC
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Coding sequence (CDS) from alignment at Contig_77:659323..661535-

>mRNA_12499 ID=mRNA_12499|Name=jgi.p|Trimin1|351002|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=378bp|location=Sequence derived from alignment at Contig_77:659323..661535- (Tribonema minus UTEX_B_3156 )
ATGGCTGACATGGACAAAAGGCGGACAGGGCGGCTGCCTCCGGAGGTCAA
TCGAATACTCTACGTCAGGAACCTGCCGTTCAAGATCACGGCGGATGAAA
TGTACGACATCTTCGGGAAGTACGGCGCGATTCGGCAAATACGCCTGGGC
GACAAGCCGGACACGAGGGGCACAGCCTTTGTCGTGTACGAAGACATCTA
CGACGCCAAGGCGGCAGTCGACCACCTCTCCGGCTTTAACGTGTGCGGCC
GCTACCTCATCGTCCTCTACTACCAGTCCACCAAGGCGCTCAAGCGCGTG
GACGAGATGAAGAAGCGGCGGGAGATCGAGGAGATCAAGGCTAAATTCGG
CGTCGGCGGCGAGGCCGCCGCCATTTGA
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