mRNA_11337 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|170825
Unique NamemRNA_11337
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|170825 vs. uniprot
Match: A0A836C8C8_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C8_9STRA)

HSP 1 Score: 404 bits (1039), Expect = 7.220e-140
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 1 
Query:    1 MLAPEPSAAVQQDKTAGSNXXXXXXXXXXXXXXXXXXXXXLLAQVCSQYDATPSTFISQVLRLYELKVLDSISFLYEMGFVRRPPXXXXXXXXXXXXXXXXXXXXSALPVADRAAETAAVRIHLGNQEPIPLAGGAXXXXXXXXXXIGAPSRYRQDFEEIGLLAAGAFGDVFRTRHRLDGAEYAIKKVAFRGERLDSPLARAVLREVNVLSQIEHPNCVRYHTAWLESSWVPKHGSGSSXXXXXXXXXXXXXXXXXPAEDAASEAQETHVSAMLSTTAAIGVTHGAEV 864
            MLAPEPSAAVQQDKTAGSNXXXXXXXXXXXXXXXXXXXXXLLAQVCSQYDATPSTFISQVLRLYELKVLDSISFLYEMGFVRRPPXXXXXXXXXXXXXXXXXXXXSALPVADRAAETAAVRIHLGNQEPIPLAGGAXXXXXXXXXXIGAPSRYRQDFEEIGLLAAGAFGDVFRTRHRLDGAEYAIKKVAFRGERLDSPLARAVLREVNVLSQIEHPNCVRYHTAWLESSWVPKHGSGSSXXXXXXXXXXXXXXXXXPAEDAASEAQETHVSAMLSTTAAIGVTHGAEV
Sbjct:    1 MLAPEPSAAVQQDKTAGSNXXXXXXXXXXXXXXXXXXXXXLLAQVCSQYDATPSTFISQVLRLYELKVLDSISFLYEMGFVRRPPXXXXXXXXXXXXXXXXXXXXSALPVADRAAETAAVRIHLGNQEPIPLAGGAXXXXXXXXXXIGAPSRYRQDFEEIGLLAAGAFGDVFRTRHRLDGAEYAIKKVAFRGERLDSPLARAVLREVNVLSQIEHPNCVRYHTAWLESSWVPKHGSGSSXXXXXXXXXXXXXXXXXPAEDAASEAQETHVSAMLSTTAAIGVTHGAEV 288
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BLAST of jgi.p|Trimin1|170825 vs. uniprot
Match: A0A6H5KC36_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KC36_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 2.890e-40
Identity = 101/225 (44.89%), Postives = 124/225 (55.11%), Query Frame = 1 
Query:  121 LLAQVCSQYDATPSTFISQVLRLYELKVLDSISFLYEMGFVRRPPXXXXXXXXXXXXXXXXXXXXSALPV----ADRAAETAAVR--IHLGNQEPIPLAGGAXXXXXXXXXX--------------------------IGAPSRYRQDFEEIGLLAAGAFGDVFRTRHRLDGAEYAIKKVAFRGERLDSPLARAVLREVNVLSQIEHPNCVRYHTAWLESSWVPK 699
            LLA +CS++DATP TF+ QVL LYE KVLDSI FL+++GFV  PP                     ALP      DRAA   AVR  I+   Q+  PL  GA                                    +   SRY +DF+E GL+A G+FGDV+RTRHRLDG  YAIKKV FRG  + +P A+AV+REV  L+Q++H N VRYHT+WLESSWV K
Sbjct:  121 LLAHMCSEHDATPRTFVEQVLVLYEAKVLDSIQFLFDLGFV--PPV--------------------ALPSYRTPPDRAAVVEAVRRQINRRGQQGEPLLLGAWPSGPPARAAXXXXXXXXXXDGVDRDRRSATPLGLRVLGTSRYLRDFDEEGLIARGSFGDVYRTRHRLDGTRYAIKKVVFRGTGMSNPRAQAVMREVQCLAQLDHKNVVRYHTSWLESSWVEK 323
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BLAST of jgi.p|Trimin1|170825 vs. uniprot
Match: A0A6A5AFL3_9STRA (Protein kinase domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AFL3_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.210e-29
Identity = 76/199 (38.19%), Postives = 107/199 (53.77%), Query Frame = 1 
Query:  121 LLAQVCSQYDATPSTFISQVLRLYELKVLDSISFLYEMGFVRRPPXXXXXXXXXXXXXXXXXXXXSALPVADRAAETAAVRIHLGNQEPIPLAGGAXXXXXXXXXXIGAPSRYRQDFEEIGLLAAGAFGDVFRTRHRLDGAEYAIKKVAFRGERLDSPLARAVLREVNVLSQIEHPNCVRYHTAWLESSWVPKHGSGSS 717
            LLA+VC+ YDATP TF++ VLRL+ L ++DSI+FL ++G                            LP +  AA ++     L   +  P   G               SRY +DF+E+ LL  G FG VF+ RH+LDG  YAIK+V F  +   SPL ++VLREV+ L++ +HPN  RY+ AWLE +W+P   S S+
Sbjct:   94 LLARVCTVYDATPKTFVANVLRLHRLGIIDSIAFLADLGL---------------------------LPTSPLAASSSPRHDFLEPWDADPR--GLHLIPQTLNM-----SRYARDFDELCLLGRGGFGHVFKARHKLDGLCYAIKQVHFLNKGYQSPLVQSVLREVHCLARCDHPNVNRYYGAWLEPTWIPMGPSASA 258
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BLAST of jgi.p|Trimin1|170825 vs. uniprot
Match: A0A485L7I8_9STRA (Aste57867_17300 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7I8_9STRA)

HSP 1 Score: 126 bits (317), Expect = 4.440e-29
Identity = 75/192 (39.06%), Postives = 98/192 (51.04%), Query Frame = 1 
Query:  121 LLAQVCSQYDATPSTFISQVLRLYELKVLDSISFLYEMGFVRRPPXXXXXXXXXXXXXXXXXXXXSALPVADRAAETAAVRIHLGNQEPIPLAGGAXXXXXXXXXXIGAPSRYRQDFEEIGLLAAGAFGDVFRTRHRLDGAEYAIKKVAFRGERLDSPLARAVLREVNVLSQIEHPNCVRYHTAWLESSWVP 696
            LLA+VC+ YDATP TF+S VLRL+ L ++DSI+FL ++G +   P                              ET    +H   Q                       SRY +DFEEI LL  G FG VF+ RH+LDG  YAIK+V F  +   SPL + VLREV+ L++ +HPN  RY  AWLE +W+P
Sbjct:   92 LLARVCTVYDATPKTFVSNVLRLHRLGIIDSIAFLSDLGLLPNSPLTSPSNADYLEQW-----------------ETDVKNLHTFPQSL-------------------NMSRYARDFEEISLLGQGGFGQVFKARHKLDGICYAIKQVQFLNKGYQSPLVQNVLREVHCLARCDHPNVNRYFGAWLEPTWIP 247
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BLAST of jgi.p|Trimin1|170825 vs. uniprot
Match: A0A3R8CPM8_9STRA (Protein kinase domain-containing protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R8CPM8_9STRA)

HSP 1 Score: 124 bits (312), Expect = 5.050e-29
Identity = 76/199 (38.19%), Postives = 107/199 (53.77%), Query Frame = 1 
Query:  121 LLAQVCSQYDATPSTFISQVLRLYELKVLDSISFLYEMGFVRRPPXXXXXXXXXXXXXXXXXXXXSALPVADRAAETAAVRIHLGNQEPIPLAGGAXXXXXXXXXXIGAPSRYRQDFEEIGLLAAGAFGDVFRTRHRLDGAEYAIKKVAFRGERLDSPLARAVLREVNVLSQIEHPNCVRYHTAWLESSWVPKHGSGSS 717
            LLA+VC+ YDATP TF++ VLRL+ L ++DSI+FL ++G                            LP +  AA ++     L   +  P   G               SRY +DF+E+ LL  G FG VF+ RH+LDG  YAIK+V F  +   SPL ++VLREV+ L++ +HPN  RY+ AWLE +W+P   S S+
Sbjct:   67 LLARVCTVYDATPKTFVANVLRLHRLGIIDSIAFLADLGL---------------------------LPTSPLAASSSPRHDFLEPWDADPR--GLHLIPQTLNM-----SRYARDFDELCLLGRGGFGHVFKARHKLDGLCYAIKQVHFLNKGYQSPLVQSVLREVHCLARCDHPNVNRYYGAWLEPTWIPMGPSASA 231
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BLAST of jgi.p|Trimin1|170825 vs. uniprot
Match: A0A6G0WH83_9STRA (Protein kinase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WH83_9STRA)

HSP 1 Score: 125 bits (315), Expect = 7.420e-29
Identity = 73/192 (38.02%), Postives = 104/192 (54.17%), Query Frame = 1 
Query:  121 LLAQVCSQYDATPSTFISQVLRLYELKVLDSISFLYEMGFVRRPPXXXXXXXXXXXXXXXXXXXXSALPVADRAAETAAVRIHLGNQEPIPLAGGAXXXXXXXXXXIGAPSRYRQDFEEIGLLAAGAFGDVFRTRHRLDGAEYAIKKVAFRGERLDSPLARAVLREVNVLSQIEHPNCVRYHTAWLESSWVP 696
            LLA+VC+ YDATP TF++ VLRL+ L ++DSI+FL ++G +   P                         + R ++   +  H  + +  P A                 SRY +DF+E+GLL  G FG VF+ RH+LDG  YAIK+V F  +   SPL + VLREV+ L++ +HPN  RY  AWLE +W+P
Sbjct:   86 LLARVCTVYDATPKTFVANVLRLHRLGIIDSIAFLSDLGLLPTSPVS-----------------------SPRNSDYIELWDHDNSLDIFPQALNM--------------SRYARDFDEMGLLGQGGFGQVFKARHKLDGICYAIKQVQFLNKGFQSPLVQNVLREVHCLARCDHPNVNRYFGAWLEPTWMP 240
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BLAST of jgi.p|Trimin1|170825 vs. uniprot
Match: W4FQF5_9STRA (PEK protein kinase n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FQF5_9STRA)

HSP 1 Score: 124 bits (312), Expect = 2.310e-28
Identity = 76/199 (38.19%), Postives = 107/199 (53.77%), Query Frame = 1 
Query:  121 LLAQVCSQYDATPSTFISQVLRLYELKVLDSISFLYEMGFVRRPPXXXXXXXXXXXXXXXXXXXXSALPVADRAAETAAVRIHLGNQEPIPLAGGAXXXXXXXXXXIGAPSRYRQDFEEIGLLAAGAFGDVFRTRHRLDGAEYAIKKVAFRGERLDSPLARAVLREVNVLSQIEHPNCVRYHTAWLESSWVPKHGSGSS 717
            LLA+VC+ YDATP TF++ VLRL+ L ++DSI+FL ++G                            LP +  AA ++     L   +  P   G               SRY +DF+E+ LL  G FG VF+ RH+LDG  YAIK+V F  +   SPL ++VLREV+ L++ +HPN  RY+ AWLE +W+P   S S+
Sbjct:  128 LLARVCTVYDATPKTFVANVLRLHRLGIIDSIAFLADLGL---------------------------LPTSPLAASSSPRHDFLEPWDADPR--GLHLIPQTLNM-----SRYARDFDELCLLGRGGFGHVFKARHKLDGLCYAIKQVHFLNKGYQSPLVQSVLREVHCLARCDHPNVNRYYGAWLEPTWIPMGPSASA 292
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BLAST of jgi.p|Trimin1|170825 vs. uniprot
Match: A0A1W0A2Y0_9STRA (Heme regulated eukaryotic translation initiation factor n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2Y0_9STRA)

HSP 1 Score: 123 bits (309), Expect = 5.190e-28
Identity = 77/192 (40.10%), Postives = 102/192 (53.12%), Query Frame = 1 
Query:  121 LLAQVCSQYDATPSTFISQVLRLYELKVLDSISFLYEMGFVRRPPXXXXXXXXXXXXXXXXXXXXSALPVADRAAETAAVRIHLGNQEPIPLAGGAXXXXXXXXXXIGAPSRYRQDFEEIGLLAAGAFGDVFRTRHRLDGAEYAIKKVAFRGERLDSPLARAVLREVNVLSQIEHPNCVRYHTAWLESSWVP 696
            LLA+VCS YDATP TF++ VLRL+ + VLDSI+FL ++G +                        S+   + R  +     I    QE      G               SRY +DFEEI L+  G FG VF  RH+LDG  YAIK+V F  +   SPL + VLREV+ L++ +HPN  RY++AWLE +WVP
Sbjct:   85 LLARVCSVYDATPKTFVANVLRLHRMGVLDSIAFLTDLGLLT-----------------------SSSSNSPRNIDA----IEQWEQEKGTGTNGLLGFPQSLNV-----SRYARDFEEIRLIGQGGFGQVFMARHKLDGICYAIKQVRFFNKGYQSPLVQNVLREVHCLARCDHPNVNRYYSAWLEPTWVP 244
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BLAST of jgi.p|Trimin1|170825 vs. uniprot
Match: A0A024TET7_9STRA (PEK protein kinase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TET7_9STRA)

HSP 1 Score: 122 bits (307), Expect = 9.700e-28
Identity = 72/192 (37.50%), Postives = 102/192 (53.12%), Query Frame = 1 
Query:  121 LLAQVCSQYDATPSTFISQVLRLYELKVLDSISFLYEMGFVRRPPXXXXXXXXXXXXXXXXXXXXSALPVADRAAETAAVRIHLGNQEPIPLAGGAXXXXXXXXXXIGAPSRYRQDFEEIGLLAAGAFGDVFRTRHRLDGAEYAIKKVAFRGERLDSPLARAVLREVNVLSQIEHPNCVRYHTAWLESSWVP 696
            LLA+VC+ YDATP TF++ VLRL+ L ++DSI+FL ++G +                           P+A     T  +     +   + L                  SRY +DF+E+ LL  G FG VF+ RH+LDG  YAIK+V F  +   SPL + VLREV+ L++ +HPN  RY++AWLE +WVP
Sbjct:   93 LLARVCTVYDATPKTFVANVLRLHRLGIIDSIAFLADLGLL------------------------PTSPLASSPRPTDFIEPWDSDPRGLHLIPQTLNM-----------SRYARDFDEVCLLGQGGFGQVFKARHKLDGICYAIKQVNFVNKGFQSPLVQNVLREVHCLARCDHPNVNRYYSAWLEPTWVP 249
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BLAST of jgi.p|Trimin1|170825 vs. uniprot
Match: A0A1V9Z444_9STRA (Heme regulated eukaryotic translation initiation factor-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z444_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.000e-27
Identity = 76/192 (39.58%), Postives = 100/192 (52.08%), Query Frame = 1 
Query:  121 LLAQVCSQYDATPSTFISQVLRLYELKVLDSISFLYEMGFVRRPPXXXXXXXXXXXXXXXXXXXXSALPVADRAAETAAVRIHLGNQEPIPLAGGAXXXXXXXXXXIGAPSRYRQDFEEIGLLAAGAFGDVFRTRHRLDGAEYAIKKVAFRGERLDSPLARAVLREVNVLSQIEHPNCVRYHTAWLESSWVP 696
            LLA+VCS YDATP TF++ VLRL+ + VL+SI+FL ++G +                         A   A     T A+       E   L  G               SRY +DF+EI L+  G FG VF  RH+LDG  YAIK+V F  +   SPL + VLREV+ L++ +HPN  RY +AWLE +WVP
Sbjct:  100 LLARVCSVYDATPKTFVANVLRLHRMGVLESIAFLSDLGLL-------------------------ASSAATSPRNTDAI-------EQWDLDKGGVGGGMLGFPQSLNVSRYARDFDEIRLIGQGGFGQVFMARHKLDGICYAIKQVRFFNKGFQSPLVQNVLREVHCLARCDHPNVNRYFSAWLEPTWVP 259
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|170825 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8C8_9STRA7.220e-140100.00Protein kinase domain-containing protein n=1 Tax=T... [more]
A0A6H5KC36_9PHAE2.890e-4044.89Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A6A5AFL3_9STRA1.210e-2938.19Protein kinase domain-containing protein n=1 Tax=A... [more]
A0A485L7I8_9STRA4.440e-2939.06Aste57867_17300 protein n=1 Tax=Aphanomyces stella... [more]
A0A3R8CPM8_9STRA5.050e-2938.19Protein kinase domain-containing protein n=8 Tax=A... [more]
A0A6G0WH83_9STRA7.420e-2938.02Protein kinase domain-containing protein n=1 Tax=A... [more]
W4FQF5_9STRA2.310e-2838.19PEK protein kinase n=3 Tax=Aphanomyces astaci TaxI... [more]
A0A1W0A2Y0_9STRA5.190e-2840.10Heme regulated eukaryotic translation initiation f... [more]
A0A024TET7_9STRA9.700e-2837.50PEK protein kinase n=1 Tax=Aphanomyces invadans Ta... [more]
A0A1V9Z444_9STRA1.000e-2739.58Heme regulated eukaryotic translation initiation f... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_76contigContig_76:149628..151544 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|170825|e_gw1.76.71.1
BRITEko00000,ko00001,ko01000,ko01001
KEGG Pathwayko04137,ko04138,ko04140,ko04141,ko04210,ko04214,ko04932,ko05010,ko05160,ko05162,ko05164,ko05168,ko05169,map04137,map04138,map04140,map04141,map04210,map04214,map04932,map05010,map05160,map05162,map05164,map05168,map05169
KEGG koko:K08860,ko:K16194,ko:K16196
EC2.7.11.1
Descriptioneukaryotic translation initiation factor 2alpha kinase activity
COG categoryJ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0124@1|root,KOG1035@2759|Eukaryota
Evalue1.02e-41
Seed ortholog2880.D8LBS3
Hectar predicted targeting categoryother localisation
TranscriptId171147
TrackFilteredModels1
ProteinId170825
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|170825gene_11337Tribonema minus UTEX_B_3156 geneContig_76 149628..151544 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11337_1exon_11337_1Tribonema minus UTEX_B_3156 exonContig_76 149628..149804 +
exon_11337_2exon_11337_2Tribonema minus UTEX_B_3156 exonContig_76 150371..150754 +
exon_11337_3exon_11337_3Tribonema minus UTEX_B_3156 exonContig_76 151239..151544 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11337CDS_11337Tribonema minus UTEX_B_3156 CDSContig_76 149628..149804 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|170825Trimin1|170825|e_gw1.76.71.1Tribonema minus UTEX_B_3156 polypeptideContig_76 149628..151544 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11337 ID=mRNA_11337|Name=jgi.p|Trimin1|170825|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=867bp|location=Sequence derived from alignment at Contig_76:149628..151544+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTTGCGCCAGAGCCATCGGCGGCGGTGCAGCAGGACAAGACTGCTGG
TAGCAATGGAGCTGCGTCTGCTGCTGAGGAGCGAAGGATTCAGCAAGAAA
GGCAGTTGCTGCTGATTATGCTTCTGGCTCAGGTCTGCAGCCAGTACGAC
GCAACACCGAGCACTTTCATTTCTCAGGTGCTGCGCCTGTACGAGCTCAA
GGTCCTGGACTCCATCAGCTTCTTGTACGAGATGGGCTTCGTACGGCGCC
CGCCGCCGCTGCTCGCCATCGAAAGCGGCAGCAGCGGCGGCAGCGGCGGC
GGCGGCGGCGGCAGCAGCGCTCTGCCCGTCGCAGACCGCGCCGCGGAAAC
GGCGGCGGTGCGCATCCACCTCGGCAACCAGGAGCCGATACCGCTCGCGG
GCGGCGCAGCGGCGGCGGGGGGCGCGGGGGGCGGCGGCATCGGCGCGCCC
AGCCGCTACCGCCAGGACTTTGAGGAGATTGGGCTGCTGGCGGCGGGCGC
GTTCGGCGACGTGTTCCGCACGCGCCACCGCCTCGACGGCGCCGAGTACG
CCATCAAGAAGGTGGCGTTCCGCGGCGAGCGGCTGGACTCGCCGCTGGCT
CGCGCCGTCCTGCGCGAGGTCAACGTGCTCTCGCAGATAGAGCACCCCAA
CTGCGTCCGCTACCACACGGCGTGGCTGGAGAGCAGCTGGGTGCCAAAGC
ATGGCAGTGGCAGCAGCGGCGGCGGCGGCGGCATGGCGATGATCGAGGCG
GCGGCGGCGGCGGCGGCGCCCGCGGAGGACGCTGCGTCGGAAGCGCAGGA
GACGCACGTGAGTGCAATGCTGAGCACTACTGCTGCTATAGGGGTTACAC
ACGGCGCTGAAGTGTAG
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protein sequence of jgi.p|Trimin1|170825

>Trimin1|170825|e_gw1.76.71.1 ID=Trimin1|170825|e_gw1.76.71.1|Name=jgi.p|Trimin1|170825|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=289bp
MLAPEPSAAVQQDKTAGSNGAASAAEERRIQQERQLLLIMLLAQVCSQYD
ATPSTFISQVLRLYELKVLDSISFLYEMGFVRRPPPLLAIESGSSGGSGG
GGGGSSALPVADRAAETAAVRIHLGNQEPIPLAGGAAAAGGAGGGGIGAP
SRYRQDFEEIGLLAAGAFGDVFRTRHRLDGAEYAIKKVAFRGERLDSPLA
RAVLREVNVLSQIEHPNCVRYHTAWLESSWVPKHGSGSSGGGGGMAMIEA
AAAAAAPAEDAASEAQETHVSAMLSTTAAIGVTHGAEV*
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mRNA from alignment at Contig_76:149628..151544+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11337 ID=mRNA_11337|Name=jgi.p|Trimin1|170825|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1917bp|location=Sequence derived from alignment at Contig_76:149628..151544+ (Tribonema minus UTEX_B_3156 )
ATGCTTGCGCCAGAGCCATCGGCGGCGGTGCAGCAGGACAAGACTGCTGG
TAGCAATGGAGCTGCGTCTGCTGCTGAGGAGCGAAGGATTCAGCAAGAAA
GGCAGTTGCTGCTGATTATGCTTCTGGCTCAGGTCTGCAGCCAGTACGAC
GCAACACCGAGCACTTTCATTTCTCAGGTGAGGTCTGTCTGTACGTGTTC
AACATTGTCGGCTGCGATCCTGCAATATGTGGTTTTGGATGCATGGCACA
ACATGAGTGCAGGCATTGTCGTTGTTGTGGCGGCTTCAGCCCTTCTTGCT
CAGCTCTTGTCCATCACAATGTAGTTTTCAGTCGAGCAATCGAGGTCAGA
ATGTTCGCCGTACAGTTAAGGCGCTCCTCCTGACAGGGCTGCGAAGACAG
GGCTCTGAGAGCTGCCAGTATGACGGTCATGCCCTGCAGGGGTGGCATGG
CAGCAGAACAGGCAGCACCTGCCCTGCTATCTTTCTGGGAGATCATCAAC
GCACTCAACTGTCCAACACAGTGTTGCCCCAGTTGGCCATCGGCTCGCTA
TGCTCTGCGCGTGAAATGCAAGCGGAGTGTCGCCCTGTCCTGCACTATTT
GTTCTGAATCCACAGCTCGCGGGCTTACAACTGCGCACATGCAACACCAT
GTCAGCATGGCATGTACATGCCACCATTGTCACCCCGTCGCCATCCGACT
GTGCACCACCACCCTCGATTCCCCACACCCCACGGCACGGCAGGTGCTGC
GCCTGTACGAGCTCAAGGTCCTGGACTCCATCAGCTTCTTGTACGAGATG
GGCTTCGTACGGCGCCCGCCGCCGCTGCTCGCCATCGAAAGCGGCAGCAG
CGGCGGCAGCGGCGGCGGCGGCGGCGGCAGCAGCGCTCTGCCCGTCGCAG
ACCGCGCCGCGGAAACGGCGGCGGTGCGCATCCACCTCGGCAACCAGGAG
CCGATACCGCTCGCGGGCGGCGCAGCGGCGGCGGGGGGCGCGGGGGGCGG
CGGCATCGGCGCGCCCAGCCGCTACCGCCAGGACTTTGAGGAGATTGGGC
TGCTGGCGGCGGGCGCGTTCGGCGACGTGTTCCGCACGCGCCACCGCCTC
GACGGCGCCGAGTACGCCATCAAGAAGGTGCGTGGGTAGGGTAGGTAGGC
GTGTGTGGGTCTGGGTGGTGCGTCAACTTCAAGTGTTGAACTCGAAGTGC
TGGCGCGCCGTCGAGGAGGTGCATGGGCGAATGCGTGCGTAGCGGCGCGG
CGCGGTGGTGGGCTGCATGTGGCGCGTCAACCTCAAGCATCGACTTCAAG
TGCTAGTTTTTTGTTTGTTATCCACCCGCGTGCCCCAGAATGATGCTGGT
GTGCATGCGGACGAGAACTTCACGCTCAGAACTGTCATCATCCCTCGACG
GACGTCATCGCGCGCATCGCATCAGCCGTCAAAGAGGCTTGCGGGGTGCA
TGTCACCGCCACACGCAAGGACTTTGGAGCGTCATGCGCGCACACCGCAG
AGCGCACACAAGAGAGCGTCAGGTGTGCAAGAATGCGCGCGCGCGTGCCT
CCCCACCCACCCTTCGCACACACGCGCAGACGCCCCGCGCGCGCGATGCA
CGCCGCTGCAGGTGGCGTTCCGCGGCGAGCGGCTGGACTCGCCGCTGGCT
CGCGCCGTCCTGCGCGAGGTCAACGTGCTCTCGCAGATAGAGCACCCCAA
CTGCGTCCGCTACCACACGGCGTGGCTGGAGAGCAGCTGGGTGCCAAAGC
ATGGCAGTGGCAGCAGCGGCGGCGGCGGCGGCATGGCGATGATCGAGGCG
GCGGCGGCGGCGGCGGCGCCCGCGGAGGACGCTGCGTCGGAAGCGCAGGA
GACGCACGTGAGTGCAATGCTGAGCACTACTGCTGCTATAGGGGTTACAC
ACGGCGCTGAAGTGTAG
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Coding sequence (CDS) from alignment at Contig_76:149628..151544+

>mRNA_11337 ID=mRNA_11337|Name=jgi.p|Trimin1|170825|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=867bp|location=Sequence derived from alignment at Contig_76:149628..151544+ (Tribonema minus UTEX_B_3156 )
ATGCTTGCGCCAGAGCCATCGGCGGCGGTGCAGCAGGACAAGACTGCTGG
TAGCAATGGAGCTGCGTCTGCTGCTGAGGAGCGAAGGATTCAGCAAGAAA
GGCAGTTGCTGCTGATTATGCTTCTGGCTCAGGTCTGCAGCCAGTACGAC
GCAACACCGAGCACTTTCATTTCTCAGGTGCTGCGCCTGTACGAGCTCAA
GGTCCTGGACTCCATCAGCTTCTTGTACGAGATGGGCTTCGTACGGCGCC
CGCCGCCGCTGCTCGCCATCGAAAGCGGCAGCAGCGGCGGCAGCGGCGGC
GGCGGCGGCGGCAGCAGCGCTCTGCCCGTCGCAGACCGCGCCGCGGAAAC
GGCGGCGGTGCGCATCCACCTCGGCAACCAGGAGCCGATACCGCTCGCGG
GCGGCGCAGCGGCGGCGGGGGGCGCGGGGGGCGGCGGCATCGGCGCGCCC
AGCCGCTACCGCCAGGACTTTGAGGAGATTGGGCTGCTGGCGGCGGGCGC
GTTCGGCGACGTGTTCCGCACGCGCCACCGCCTCGACGGCGCCGAGTACG
CCATCAAGAAGGTGGCGTTCCGCGGCGAGCGGCTGGACTCGCCGCTGGCT
CGCGCCGTCCTGCGCGAGGTCAACGTGCTCTCGCAGATAGAGCACCCCAA
CTGCGTCCGCTACCACACGGCGTGGCTGGAGAGCAGCTGGGTGCCAAAGC
ATGGCAGTGGCAGCAGCGGCGGCGGCGGCGGCATGGCGATGATCGAGGCG
GCGGCGGCGGCGGCGGCGCCCGCGGAGGACGCTGCGTCGGAAGCGCAGGA
GACGCACGTGAGTGCAATGCTGAGCACTACTGCTGCTATAGGGGTTACAC
ACGGCGCTGAAGTGTAG
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