mRNA_10523 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|170590
Unique NamemRNA_10523
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|170590 vs. uniprot
Match: A0A835YM61_9STRA (DNA topoisomerase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM61_9STRA)

HSP 1 Score: 1338 bits (3464), Expect = 0.000e+0
Identity = 753/753 (100.00%), Postives = 753/753 (100.00%), Query Frame = 1 
Query:    1 RFDGLDQSIISYGPCQFPTLGFIVERYRRIQAFQREAFWSIAMEYCADAAGGARLPAPXXXXXXXXXXXXXXXXQATRASFMWERGRLFDRGVAAALAELCADAGTAVVTAVSARPQTRRRPLPMSTVELQRRASRFLRIPSERAMAAAEALYQRGVLSYPRTETDAFSRETDLAGLVGEFRGNAALGAYAAALLDGGAFEWPREGTNNDNAHPPIHPTASVDPATLHGDERGVYELVARHFLAACSRDARGQQTSVRAHMGEEFSASGLMITERNWLEIYHPWERWSDKAIPTFTVGQEFVPTSLMLTEGRTEPPPLLSESDLIQLMDANRIGTDATIAEHIKKIQERGYAERCHESRFRPTVLGLALVDGYEALGLKLSQPLLRQAQEQDCKLVARRELARADAIARCLSVMKPAFEKCVSDAHVLDAAIGAHFGALGARAACVTAAFAACGNCGTRMDLRVTDAGXXXXXXXXARPLLYCTTCRRGLPLPHRGEIALATPGVACPLCAYEVLEVRPGNGFEGNAYTICPWCYNNPPEEHGGAGVGTFPCFLCSADCPLAKKTGSDATPIAPCPLGCGNSLSIRSAXXXXXXXXXXXXXXXXXXXXXXSLSCSGYPACRGAVWLPRVVASARPAESGATCARCGPNVRRLTLTLRRAGRPAYVPPLLEERRGGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAPKITVRKDGPNQGRNFFKCATGECAFWEWEHDNWPEGGGG 2259
            RFDGLDQSIISYGPCQFPTLGFIVERYRRIQAFQREAFWSIAMEYCADAAGGARLPAPXXXXXXXXXXXXXXXXQATRASFMWERGRLFDRGVAAALAELCADAGTAVVTAVSARPQTRRRPLPMSTVELQRRASRFLRIPSERAMAAAEALYQRGVLSYPRTETDAFSRETDLAGLVGEFRGNAALGAYAAALLDGGAFEWPREGTNNDNAHPPIHPTASVDPATLHGDERGVYELVARHFLAACSRDARGQQTSVRAHMGEEFSASGLMITERNWLEIYHPWERWSDKAIPTFTVGQEFVPTSLMLTEGRTEPPPLLSESDLIQLMDANRIGTDATIAEHIKKIQERGYAERCHESRFRPTVLGLALVDGYEALGLKLSQPLLRQAQEQDCKLVARRELARADAIARCLSVMKPAFEKCVSDAHVLDAAIGAHFGALGARAACVTAAFAACGNCGTRMDLRVTDAGXXXXXXXXARPLLYCTTCRRGLPLPHRGEIALATPGVACPLCAYEVLEVRPGNGFEGNAYTICPWCYNNPPEEHGGAGVGTFPCFLCSADCPLAKKTGSDATPIAPCPLGCGNSLSIRSAXXXXXXXXXXXXXXXXXXXXXXSLSCSGYPACRGAVWLPRVVASARPAESGATCARCGPNVRRLTLTLRRAGRPAYVPPLLEERRGGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAPKITVRKDGPNQGRNFFKCATGECAFWEWEHDNWPEGGGG
Sbjct:    1 RFDGLDQSIISYGPCQFPTLGFIVERYRRIQAFQREAFWSIAMEYCADAAGGARLPAPXXXXXXXXXXXXXXXXQATRASFMWERGRLFDRGVAAALAELCADAGTAVVTAVSARPQTRRRPLPMSTVELQRRASRFLRIPSERAMAAAEALYQRGVLSYPRTETDAFSRETDLAGLVGEFRGNAALGAYAAALLDGGAFEWPREGTNNDNAHPPIHPTASVDPATLHGDERGVYELVARHFLAACSRDARGQQTSVRAHMGEEFSASGLMITERNWLEIYHPWERWSDKAIPTFTVGQEFVPTSLMLTEGRTEPPPLLSESDLIQLMDANRIGTDATIAEHIKKIQERGYAERCHESRFRPTVLGLALVDGYEALGLKLSQPLLRQAQEQDCKLVARRELARADAIARCLSVMKPAFEKCVSDAHVLDAAIGAHFGALGARAACVTAAFAACGNCGTRMDLRVTDAGXXXXXXXXARPLLYCTTCRRGLPLPHRGEIALATPGVACPLCAYEVLEVRPGNGFEGNAYTICPWCYNNPPEEHGGAGVGTFPCFLCSADCPLAKKTGSDATPIAPCPLGCGNSLSIRSAXXXXXXXXXXXXXXXXXXXXXXSLSCSGYPACRGAVWLPRVVASARPAESGATCARCGPNVRRLTLTLRRAGRPAYVPPLLEERRGGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAPKITVRKDGPNQGRNFFKCATGECAFWEWEHDNWPEGGGG 753
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BLAST of jgi.p|Trimin1|170590 vs. uniprot
Match: D7FUP7_ECTSI (DNA topoisomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP7_ECTSI)

HSP 1 Score: 623 bits (1607), Expect = 3.430e-211
Identity = 360/778 (46.27%), Postives = 446/778 (57.33%), Query Frame = 1 
Query:    1 RFDGLDQSIISYGPCQFPTLGFIVERYRRIQAFQREAFWSIAMEYCADAAGGARLPAPXXXXXXXXXXXXXXXXQATRASFMWERGRLFDRGVAAALAELCADAGTAVVTAVSARPQTRRRPLPMSTVELQRRASRFLRIPSERAMAAAEALYQRGVLSYPRTETDAFSRETDLAGLVGEFRGNAALGAYAAALLDGGAFEWPREGTNNDNAHPPIHPTASVDPATLHGDERGVYELVARHFLAACSRDARGQQTSVRAHMG-EEFSASGLMITERNWLEIYHPWERWSDKAIPTFTVGQEFVPTSLMLTEGRTEPPPLLSESDLIQLMDANRIGTDATIAEHIKKIQERGYAERCHESRFRPTVLGLALVDGYEALGLKLSQPLLRQAQEQDCKLVARRELARADAIARCLSVMKPAFEKCVSDAHVLDAAIGAHFGALGA-----RAACVTAAFAACGNCGTRMDLRVTDAGXXXXXXXXARPLLYCTTCRRGLPLPHRGEIALATPGVACPLCAYE-------VLEVRPGNGFEGNAYTICPWCYNNPPEEHGGAGVGTFPCFLCSADCPLAKKT-GSDATPIAPCPLGCGNSLSIRSAXXXXXXXXXXXXXXXXXXXXXXSLSCSGYPAC-RGAVWLPRVVASARPAESGATCARC-GPN----VRRLTLTLRRAGRPAYVPPLLEERRGGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAPKITVRKDGPNQGRNFFKCATGE----CAFWEW-EHDNWPEGGGG 2259
            RFD L + +ISYGPCQFPTLGFIV+RY+RIQAFQ EAFWSI MEY  D     R P                     RA F W+RGRL+D    A L E+  + G AVVT+V AR  T+ RP+PMSTVELQ+RASRF  I SER M  AEALYQRG++SYPRTET+ F RE D+  L+G+FR N   G Y   LLD G F WPREG  +D+AHPPIHPT SVDP +L  DE+ +YELV +HFLA CS+DA G QT V A+ G E+F+A+GLM+TERNWL++Y P+ERW+ + IP F  GQEFVP+ L++ EGRT+ PPLLSESDLI LMD   IGTDATIAEHI+KIQ+R YA +  + RF PT LGLALVDGY+ +G ++S P LR A E DC  ++R E  +   + RC+S MK  F+ C + AH LD A+  HF  LG+     R       F+ CG CGT MDL+ + +G         RPLL+      G PLPH+G++    P   CPLC ++       VL V  GN + G+ YT+CP+C+NN P  HGG G   F CF+CSA CPLAK+  G D T +     GCG +L+I+                         L C GYPAC    VWLP+   +    E   TCARC GP     VRRL  T +   RP +     + R GGG                                   P         GPNQGR F+ C   +    C  + W + DN   G GG
Sbjct:    4 RFDELQEGVISYGPCQFPTLGFIVDRYKRIQAFQSEAFWSIKMEYAED---DPRSPGGK-----------------ARADFSWQRGRLYDHACCAILYEMTVEDGVAVVTSVEARRVTKARPIPMSTVELQKRASRFCHISSERTMHVAEALYQRGIISYPRTETEKFKREFDINTLLGDFRDNPRFGNYVGGLLDNGGFLWPREGRGDDSAHPPIHPTKSVDPNSLQADEKKIYELVTKHFLACCSKDAVGHQTKVLANCGGEDFTATGLMVTERNWLDVYEPFERWTGRNIPEFFQGQEFVPSVLVMDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRKYAVKNEQDRFYPTTLGLALVDGYDNIGFQMSAPTLRAAMELDCTRISRGEDTKEAVVERCISKMKECFQTCQALAHKLDDAVAMHFRPLGSSGGESRTVRGGRGFSRCGVCGTAMDLKKSSSG---------RPLLFXXXXXTGFPLPHKGKLTKQDPEFECPLCHFQARFLHVLVLSVSTGNDYTGSGYTVCPYCFNNAPAAHGGEGQSQFRCFMCSASCPLAKRVQGGDTTIVRCWKAGCGQALNIKRTRTGKYH-----------------LGCKGYPACSESTVWLPKNATNVSVTEE--TCARCSGPTAADAVRRLDFTFK-FQRPWFSARTAKGRGGGGVPSRPERNEPTGTSPLNTSQSPRFPSLRNIDRFGRPLL-------GPNQGRQFYTCPRSDRNEQCTTFTWLDGDNRRSGRGG 725
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BLAST of jgi.p|Trimin1|170590 vs. uniprot
Match: A0A1V9Z583_9STRA (DNA topoisomerase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z583_9STRA)

HSP 1 Score: 449 bits (1156), Expect = 5.170e-140
Identity = 283/672 (42.11%), Postives = 374/672 (55.65%), Query Frame = 1 
Query:   16 DQSIISYGPCQFPTLGFIVERYRRIQAFQREAFWSIAMEYCADAAGGARLPAPXXXXXXXXXXXXXXXXQATRASFMWERGRLFDRGVAAALAELCADAGTAVVTAVSARPQTRRRPLPMSTVELQRRASRFLRIPSERAMAAAEALYQRGVLSYPRTETDAFSRETDLAGLVGEFRGNAALGAYAAALLDGGAFEWPREGTNNDNAHPPIHPTASVDPATLHGD-ERGVYELVARHFLAACSRDARGQQTSVRAHMGEE-FSASGLMITERNWLEIYHPWERWSDKAIPTFTVGQEFVPTSLMLTEGRTEPPPLLSESDLIQLMDANRIGTDATIAEHIKKIQERGYAERCH-ESRFRPTVLGLALVDGYEALGLKLSQPLLRQAQEQDCKLVARRELARADAIARCLSVMKPAFEKCVSDAHVLDAAIGAHFG-----ALGARAACVTAAFAACGNCGTRMDLRV-TDAGXXXXXXXXARPLLYCTTCRRGLPLPHRGEIALATPGVACPLCAYEVLEVRPGNGFEGNAYTICPWCYNNPPEEHGGAGVGTFPCFLCSADCPLAKKTGSDATPIAPCPLGCGNSLSIRSAXXXXXXXXXXXXXXXXXXXXXXSLSCSGYPACRGAVWLPRVVASARPAESGATCARCG-PN--VRRLTLTLRRAGRPAYV 1995
            +  ++S+G CQFPTLGF+V+R+  IQAF RE F+ I + +     G                             F W R R+FD     AL E C DA  A VT V+ +  ++R+PLP++TVE Q+RASR+LRI SE+AM AAEALY RG+LSYPRTETD+F   TDL  L+     +   G Y   LL GG FE PR G+++D AHPPIHPT SV  A +  D ER VYE V RHFLA CSRDARG QTSV   + +E F A GLMI ERN+L+IY  +E+W+   IP +  G  FVPT+L+L  G T PPPLL+ESDLI  MD + IGTDATIAEHI  I +R YA + + +++F+PT LGLALV  Y+ +G +L++P LR A E+DC  +A+ +      +  C+S MK  FE  V+ ++VLD     +FG     AL   +  V  AF+ACG C   M+LR  +D G           LL C  C     LP     A+A     CPLC ++V+E++   G  G  Y++CP C+N PP    G  +    C+ C+ADCPLA  T      +  C    G S+ ++                         LSC+ YPAC+ ++WLP  VA A    +   CARC  PN  V R+ L  + +  P  V
Sbjct:  207 ESRVVSFGSCQFPTLGFVVDRFLAIQAFVREPFYHIHVAHTIPDVGSI--------------------------VFSWNRARVFDFVAGLALFETCVDAQVATVTDVTKKETSKRKPLPLTTVEFQKRASRWLRISSEQAMTAAEALYNRGLLSYPRTETDSFKEGTDLPALLALHTDHEMWGGYVN-LLQGGKFEAPRRGSHDDQAHPPIHPTKSVALAAITNDVERRVYEFVVRHFLACCSRDARGSQTSVAMRLADETFGAKGLMILERNYLDIYK-YEKWAATTIPVYERGDTFVPTTLLLKAGETAPPPLLTESDLIAKMDQHGIGTDATIAEHINTILKRQYAVKVNNDTQFQPTELGLALVQTYDRMGYQLAKPDLRAAMERDCNAIAQGQKTCEQVVRDCMSQMKTIFESVVARSNVLDETFQGYFGEATPEALAVNSRVVDRAFSACGKCQQPMELRKKSDDGG----------LLVCRRCNELYALPLHS--AVAQSATRCPLCHFQVVEIQKAAGSAG--YSVCPHCFNAPP----GGRLNEMACYQCTADCPLATGTHEPFV-VEACIQCAGASMKLKKTKTAKYV-----------------LSCTEYPACKASLWLPAAVAHAMVTTT--PCARCSRPNQLVHRVGLRFQTSALPPDV 812
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BLAST of jgi.p|Trimin1|170590 vs. uniprot
Match: B7G3B1_PHATC (DNA topoisomerase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G3B1_PHATC)

HSP 1 Score: 446 bits (1148), Expect = 1.280e-139
Identity = 274/696 (39.37%), Postives = 377/696 (54.17%), Query Frame = 1 
Query:    1 RFDGL-DQSIISYGPCQFPTLGFIVERYRRIQAFQREAFWSIAMEYCADAAGGARLPAPXXXXXXXXXXXXXXXXQATRASFMWERGRLFDRGVAAALAELCADAGTAVVTAVSARPQTRRRPLPMSTVELQRRASRFLRIPSERAMAAAEALYQRGVLSYPRTETDAFSRETDLAGLVGEFRG-NAALGAYAAALLDGGAFEWPREGTNNDNAHPPIHPTASVDPATLHGD-ERGVYELVARHFLAACSRDARGQQTSVRAHMG-EEFSASGLMITERNWLEIYHPWERWSDKA--IPTFTVGQEFVPTSLMLTEGRTEPPPLLSESDLIQLMDANRIGTDATIAEHIKKIQERGYAERCHESRFRPTVLGLALVDGYEALGLKLSQPLLRQAQEQDCKLVARRELARADAIARCLSVMKPAFEKCVSDAHVLDAAIGAHFGALGA---RAACVTAAFAACGNCGTRMDLRVT--DAGXXXXXXXXARPLLYCTTCRRGLPLPHRGEIALAT------PGVACPLCAYEVLEVRPGNGFEGNAYTICPWCYNNPPEEHGGAG-VGTFPCFLCS-ADCPLAKKTGSDATPIAPCPLGCGNSLSIRSAXXXXXXXXXXXXXXXXXXXXXXSLSCSGY----PACRGAVWLPR----VVASARPAESGATCARCGPNVRRLTLTLRRAGRPAYVPPLL 2007
            +FDG  +Q +ISYGPCQFPTLGF+VER+ RI+ F  E FW + +    D     +                    Q     F W+RG L+D+ +   L E C +AG AVVTA++ R + + RP+P++TVELQ+RAS +LRI SE  M+AAE LYQ+G +SYPRTET+ F  E +   L+ +F       GAYA+ LL+   F+ PR G ++D AHPPI P  +VDP T+    +R +Y L+ +H+LA CSRDA G+ T++   MG EEF+A+GLM+ E+NWLEIY PWERW      +P   VG    PTS ++ EGR+ PP  +SE +LI LMD N IGTDATIA+HI  I +R YA +    +F PT LG+ALV+GY ++G +L++P LR+  E +C  VA     + + +   L+ MK  +E   ++A  LD A+  HF  LGA    +  V  +F+ CG C   M L+    +           R LLYC+TCR G  LP RG +   T      P V CP+C ++V+ +  G G+EGN Y +CP C+++PP +HGGA   G F CF C    C LA  T      +  CP  C  S    S                        LSC+ Y      C   +WLP+    V   +        C RC  + R +   +    +P  VPP L
Sbjct:  256 KFDGFAEQGVISYGPCQFPTLGFVVERWARIETFIPEDFWHLELAISVDDTYHQQ------SQEEDQSAARGRTQQNRTIHFSWKRGYLYDKLLTTVLFEECLEAGEAVVTAMNGRTRNKWRPVPLATVELQKRASMYLRIGSETLMSAAEELYQQGYISYPRTETERFRPEFEHRPLIQQFSSLQGEFGAYASKLLNENGFQIPRAGKSDDQAHPPITPAKAVDPNTIQDQIQRKIYSLIVKHYLACCSRDAVGRGTTLTVRMGTEEFNATGLMVIEKNWLEIYSPWERWGSGQGELPPLQVGSRIRPTSFLMKEGRSGPPQPISEVELISLMDRNGIGTDATIAQHISTILDREYARKDGRQKFLPTPLGIALVEGYNSMGYQLNKPDLRREMEAECNEVASGRKTKEEIMVPILAKMKSCYETARAEARKLDEAVARHFPRLGAGESTSQVVEESFSECGVCRNSMALKQERENNNRTTARNTVRRKLLYCSTCRAGWTLP-RGVVRPKTEQEDNGPPVKCPICQFQVIRILRGEGYEGNGYHVCPKCFSDPPSDHGGASNAGDFRCFACQHPTCALASGTPGGDVEVFRCPF-CHPSAQPTSTSDSGKVCVRKTSRGYV-------LSCNKYVRGQDRCSYTIWLPKECHKVSVLSGDENQNEICGRCS-SPRAVIRKVHFVWKPGSVPPHL 935
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BLAST of jgi.p|Trimin1|170590 vs. uniprot
Match: A0A4D9CZ97_9STRA (DNA topoisomerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ97_9STRA)

HSP 1 Score: 448 bits (1152), Expect = 1.090e-138
Identity = 281/683 (41.14%), Postives = 362/683 (53.00%), Query Frame = 1 
Query:    1 RFDGLDQSIISYGPCQFPTLGFIVERYRRIQAFQREAFWSIAMEYCADAAGGARLPAPXXXXXXXXXXXXXXXXQATRASFMWERGRLFDRGVAAALAELCADAGTAVVTAVSARPQTRRRPLPMSTVELQRRASRFLRIPSERAMAAAEALYQRGVLSYPRTETDAFSRETDLAGLVGEFRGNAALGAYAAALLDGGA--------------FEWPREGTNNDNAHPPIHPTASVDPATLHG-DERGVYELVARHFLAACSRDARGQQTSVRAHMG-EEFSASGLMITERNWLEIYHPWERWSDKAIPT--FTVGQEFVPTSLMLTEGRTEPPPLLSESDLIQLMDANRIGTDATIAEHIKKIQERGYAERCH------------ESRFRPTVLGLALVDGYEALGLKLSQPLLRQAQEQDCKLVARRELARADAIARCLSVMKPAFEKCVSDAHVLDAAIGAH---FGALGARAAC--------VTAAFAACGNCGTRMDLRVTDAGXXXXXXXXARPLLYCTTCRRGLPLPHR----GEIALATPGVACPLCAYEVLEVRP-GNGFEGNA--------YTICPWCYNNPPEEHGGAGVGTFPCFLCSA--DCPLAKKTGSDATPI-APCPLGCGNSLSIRSAXXXXXXXXXXXXXXXXXXXXXXSLSCSGYPACRGAVWL 1878
            +FDG++ SIISYGPCQFPT+GF+V+RY+ I++FQRE FW I M Y      G   P                    TR  F W+R RLFD    A L  +  +A  A VT V+A P TR RPLP+STVELQ++ASRF  + S+  M  AE LY +G +SYPRTET++FSR+ DL  L+ E   + A GA+A  L+ GG               F +PR+G+ +D AHPPIHPT    P  L G DE+ VYELV RHFLA CS DA+G++T V   MG EEF+A+G++I ERNWL++Y+ WE+W    +P     VG  FVPTSL L  GRT+PPPLLSE+DLI  MD   IGTDATIA+HIK I +R Y                 + RF+PT LGL LV+GYE +G +L++P LR   E++CK VAR E  R + +  CL  MK  FE C +    L  A+G +   +G  G R           + A F+ CG+C  RMDLR   +             L C TC     LPH        +  TP V CPLC +E L + P G G EG          Y +CPWCY++PP    G  +  F C  C+   D  L  +       +  PCPL     L    A                       L C G+PAC+G ++ 
Sbjct:  202 KFDGVEDSIISYGPCQFPTMGFVVDRYKAIESFQREEFWRIQMAYRGARENGDEGPQGF-----------------TR--FQWKRERLFDEAACAVLYVMVVEAKEARVTYVNAAPATRDRPLPLSTVELQKKASRFFNMSSDVCMHVAEELYTKGFISYPRTETESFSRDADLRSLIAEQGRHPAWGAFARELVGGGEEEGGQHGRDSGAGKFRFPRKGSKDDQAHPPIHPTKLAAPQELKGTDEQKVYELVVRHFLACCSDDAKGKRTKVTVEMGGEEFTATGIVILERNWLDVYNGWEKWHASTLPANVLQVGAAFVPTSLTLETGRTQPPPLLSEADLISRMDEKGIGTDATIAQHIKTILQRKYVTXXXXXXXXXXXXXXLQRRFQPTNLGLGLVEGYEEIGYQLTKPELRAEMERECKRVARGERGRTEMVQACLLKMKECFEDCQNQWERLPEAVGKYLRRYGQGGGREXXXXXGTIRTMQAGFSQCGHCQGRMDLRRDKSVL----------FLACETCAASHLLPHSRKGTSRPSTLTPPVLCPLCGFEALLITPEGGGREGGQGDERVPPPYHMCPWCYHHPPAS--GTAMDNFRCANCTGVLDRGLEGRENDGGGGVRGPCPLARA-VLDADKAVLSCRGCKGRHSMTLRKNERGLMLGCQGFPACKGTIYF 852
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BLAST of jgi.p|Trimin1|170590 vs. uniprot
Match: A0A7S2LVS8_9STRA (DNA topoisomerase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LVS8_9STRA)

HSP 1 Score: 437 bits (1125), Expect = 4.140e-138
Identity = 279/692 (40.32%), Postives = 374/692 (54.05%), Query Frame = 1 
Query:    1 RFDGL-DQSIISYGPCQFPTLGFIVERYRRIQAFQREAFWSIAMEYCADAAGGARLPAPXXXXXXXXXXXXXXXXQATRASFMWERGRLFDRGVAAALAELCADAGTAVVTAVSARPQTRRRPLPMSTVELQRRASRFLRIPSERAMAAAEALYQRGVLSYPRTETDAFSRETDLAGLVGEFRGNAA-LGAYAAALLDGGAFEWPREGTNNDNAHPPIHPTASVDPATLHGD-ERGVYELVARHFLAACSRDARGQQTSVRAHMG-EEFSASGLMITERNWLEIYHPWERW--SDKAIPTFTVGQEFVPTSLMLTEGRTEPPPLLSESDLIQLMDANRIGTDATIAEHIKKIQERGYAERCHESRFRPTVLGLALVDGYEALGLKLSQPLLRQAQEQDCKLVARRELARADAIARCLSVMKPAFEKCVSDAHVLDAAIGAHFGALGARAA---CVTAAFAACGNCGTRMDLRVTDAGXXXXXXXX---ARPLLYCTTCRRGLPLP-HRGEIALATPGV---------ACPLCAYEVLEVRPGNGFEGNAYTICPWCYNNPPEEHGGAGVGTFPCFLCS-ADCPLAKKTGSDATPIAPCPLGCGNSLSIRSAXXXXXXXXXXXXXXXXXXXXXXSLSCS--GYPACRGAVWLPRVVASARPAESGATCARCGPNVRRLTLTLRRAGRPAYVPP 2001
            +FDG  D  +ISYGPCQFPTLGF+VER+ RI+ F  E FW+I M          RL                   Q+      W+RGRL+DR +  AL + C +AG AVVT+++ RP+ + RP+P++TVELQ+RAS++LRI SE  M  AE LY +G +SYPRTET+ F  E +   L+  F+  A   G YA  LL    F+ PR G N+DNAHPPI P  +VDP T+    +R +Y LV +H+LA CSRDA G++T +   +  EEF A GLMI ERNWL+IY PWE+W      +P   +G   VPTSL +  G+T PP L+SE +LI LMD N IGTDATIA+HI  I +R YAE+    RF PT LG+ALV+GY ++G +L++P LR+  E +C  VA     R   +   LS M   F+   ++ H LD A+  HF  LG+ ++    + A F  CG+C     L+    G  XXXXXX      LL C  C +   +P +  E+    PGV          CP+C ++V+E       +G  Y +CP C+++PPEEHGG     FPC  C+   C LAK T      I  CP    +  S                           LSCS  G  +C+  VWLP+        +S  +C RC  N  R+   L+   +P  VPP
Sbjct:   38 KFDGFQDSGVISYGPCQFPTLGFVVERWARIETFVPEDFWTIEMSI--------RLNGDGSVNNSDQNGNSNNNQQSRPIKLTWKRGRLYDRAMTMALCDACQEAGEAVVTSLTGRPKNKWRPVPLATVELQKRASKYLRIGSEELMQKAEELYHQGFISYPRTETEKFRPEFNHHTLIQSFQAVAGEFGDYANRLLSDNNFQNPRAGQNDDNAHPPITPAKAVDPQTIADPTQRKIYTLVVKHYLACCSRDAVGRETELTLRIASEEFVAKGLMILERNWLDIYQPWEKWYTGQGELPRARIGSRIVPTSLSMNAGQTSPPQLISEVELIALMDRNGIGTDATIAQHITTIMDRKYAEKDGNQRFHPTKLGIALVEGYNSMGYQLNKPDLRREMESECNAVAAGRKTRDQILGPILSKMLECFKIVNAEVHKLDEAVARHFNNLGSDSSQYRVLQANFTRCGSCNGMTVLKQRTGGGSXXXXXXXXGGSKLLQCAPCSKSFLMPRYNREVR---PGVNPNNQHEPLICPICQFQVVECVKD---DGGTYFVCPQCFSDPPEEHGGDSTD-FPCTKCTHPTCSLAKGTRGGDVEIFSCPFCASSGTSAGKVCLKRGQHGYR-------------LSCSNGGPNSCQFTVWLPKEAREIVIDDSTGSCNRCS-NPNRVVRQLKFIWKPGSVPP 700
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BLAST of jgi.p|Trimin1|170590 vs. uniprot
Match: A0A1Z5KJN8_FISSO (DNA topoisomerase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJN8_FISSO)

HSP 1 Score: 433 bits (1114), Expect = 2.300e-135
Identity = 268/689 (38.90%), Postives = 374/689 (54.28%), Query Frame = 1 
Query:   19 QSIISYGPCQFPTLGFIVERYRRIQAFQREAFWSIAMEYCADAAGGARLPAPXXXXXXXXXXXXXXXXQATRASFMWERGRLFDRGVAAALAELCADAGTAVVTAVSARPQTRRRPLPMSTVELQRRASRFLRIPSERAMAAAEALYQRGVLSYPRTETDAFSRE-------TDLAGLVGEFRGNAALGAYAAALLDGGAFEWPREGTNNDNAHPPIHPTASVDPATL-HGDERGVYELVARHFLAACSRDARGQQTSVRAHMGEE-FSASGLMITERNWLEIYHPWERWS--DKAIPTFTVGQEFVPTSLMLTEGRTEPPPLLSESDLIQLMDANRIGTDATIAEHIKKIQERGYAERCHESRFRPTVLGLALVDGYEALGLKLSQPLLRQAQEQDCKLVARRELARADAIARCLSVMKPAFEKCVSDAHVLDAAIGAHFGALGARAACVTAAFAACGNCGTRMDLRVTDAGXXXXXXXXARPLLYCTTCRR------GLPLPHRGEIALATPGVACPLCAYEVLEVRPGNGFEGNAYTICPWCYNNPPEEHGGAGVGTFPCFLCS-ADCPLAKKTGSDATPIAPCPLGCGNSLSIRSAXXXXXXXXXXXXXXXXXXXXXXSLSCSGYPA---CRGAVWLPR-------VVASARPAESG--ATCARCGPNVRRLTLTLRRAGRPAYV 1995
            + ++SYGPCQFPTLGF+VER+ RIQ F  E FW + +   AD A                         A    F W+R RL+D+     L E C DA  A+V + + RP+ + RP+P++TVELQ+RASRFL+I SE+ M AAE LYQ+G +SYPRTET+ F  E         LA + GE      +G  A  LL  G F+ PR G N+D AHPPI P  +VDPA++ +  +R VYELV +H+LA CSRDA G++T +   MGEE F A+GLM+ ERNWL+ Y PWERWS     +P+  VG    PTSL + EGRT PP  LSE +LI LMD + IGTDATIA+HI  IQ+R YA +    +F PT LG+ALV+GY ++G +L++P LR+  E +C L+A  +    + + R L  M+  +   V +AH+LD A+  H+ +LG  +  V   F  CG C   M L+    G         R +L+C +C R      G+P P R         V CPLC Y+V+++  G+G+ G+ Y +CP C++NPP  H       F C  C+  +CPL+  T  D T +  CP         +S                        +SC+ +     C  ++WLP+       +  ++   E G  ATC+R G  V ++  T +R   P ++
Sbjct:  217 EGVVSYGPCQFPTLGFVVERWARIQTFAPEDFWFLELTLTADEAN------------------------ARPIIFQWKRTRLYDQLTTLILYEACLDAQDAIVISANGRPKHKWRPVPLATVELQKRASRFLQISSEQLMTAAEELYQQGYISYPRTETERFRPEFQHRPLLEQLATMPGE------MGELAQRLLLPGHFQNPRAGPNDDQAHPPITPCKAVDPASIGNHQQRRVYELVVKHYLACCSRDAVGRETQLVVRMGEEEFQATGLMVLERNWLDAYRPWERWSTGQGELPSLPVGSRIRPTSLTMKEGRTTPPSPLSEVELISLMDRHGIGTDATIAQHIATIQDREYAVKDGNLKFSPTQLGIALVEGYNSMGYQLNKPDLRRETEAECNLIAAGQKTAEEVVLRLLEKMQQCYRTAVQEAHLLDRAVARHYQSLGDTSTVVQEQFTLCGTCRHPMTLKHNIQGRV------TRKMLHCASCSRTWALPRGIPQPKRDA---QNQPVICPLCQYQVVQITTGDGYTGSGYNVCPHCFSNPPPGH----APDFRCLNCTNIECPLSLGT-PDVT-LFHCPFCASQGNPTQSVTLRKTSRGYV-------------VSCTHFQRGNRCPYSIWLPKECEEVTVLDVTSNENEDGLCATCSRPGHLVLKMKFTWKRGSVPPHL 847
[Close]
BLAST of jgi.p|Trimin1|170590 vs. uniprot
Match: A0A7S4EJM4_9STRA (DNA topoisomerase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EJM4_9STRA)

HSP 1 Score: 434 bits (1115), Expect = 1.770e-134
Identity = 286/720 (39.72%), Postives = 386/720 (53.61%), Query Frame = 1 
Query:    7 DGLDQSIISYGPCQFPTLGFIVERYRRIQAFQREAFWSIAMEYCADAAGGARLP--APXXXXXXXXXXXXXXXX------QATRASFMWERGRLFDRGVAAALAELCADAG--TAVVTAVSARPQTRRRPLPMSTVELQRRASRFLRIPSERAMAAAEALYQRGVLSYPRTETDAFSRETDLAGLVGEFRG-NAALGAYAAA---LLDGGAFEWPREGTNNDNAHPPIHPTASVDPATLHGD-ERGVYELVARHFLAACSRDARGQQTSVRAHMG-EEFSASGLMITERNWLEIYHPWERWS--DKAIPTFTVGQEFVPTSLMLTEGRTEPPPLLSESDLIQLMDANRIGTDATIAEHIKKIQERGYAERCHESRFRPTVLGLALVDGYEALGLKLSQPLLRQAQEQDCKLVARRELARADAIARCLSVMKPAFEKCVSDAHVLDAAIGAHFGALGA---RAACVTAAFAACGNCGTRMDLR-----------VTDAGXXXXXXXXARPLLYCTTCRRGLPLPHRGEIALATPG--------VACPLCAYEVLEVRPGNGFEGNAYTICPWCYNNPPEEHGGAGVG----TFPCFLCS-ADCPLAKKTGSDATPIAPCPLGC------GNSLSIRSAXXXXXXXXXXXXXXXXXXXXXXSLSCSGYPA---CRGAVWLPRVVASAR-PAESGATCARCGPN--VRRLTLTLRRAGRPAYV 1995
            +G    ++SYGPCQFPTLGF+VER+ RI+ F  + FW + +         A  P  AP             XXX       A   +F W+R RL+DR    A+ E C D     A VT +  RP+ + RP+P++T+ELQ+RASR+LRI SE  M+AAE LYQ+G++SYPRTET+ F  E D   L+ +F   + A G YA+    LL+   F+ PR G N+D AHPPI P   VDP T+    +R VY LV++H+LA CSRDA G++TS+   +  EEF+A GLMI ++NWLEIYHPWERWS     +P   VG    P SL++ EG+T PP  +SE +LI LMD   IGTDATIA+HI  IQ+R Y  +    RF PT LG+ALV+GY ++G +L++P LR+  E +C LVA R+  + + +   L+ MK  + K   DA  LD A+  HF  +GA       V A F+ CGNC   M L+                XXXXXX   R LL+C  C+ G  +P RG++   T          V CP+C ++V+ +  G+G+EGN Y ICP CY++PP +HG           PCF CS   C LA  T      +  CP  C      G  +++R                         LSC+ Y A   C   +W+PR   S   P      C RC     VR+LT   +  G P ++
Sbjct:  226 NGGSSGVVSYGPCQFPTLGFVVERWARIEIFVPDDFWFLELTLKVPQQAVAPPPPAAPDTDGSNRTNNADRXXXXXXXXXNARPIAFTWKRQRLYDRLATLAIYESCLDTTPCVATVTKLEGRPKNKWRPVPLATIELQKRASRYLRIGSETLMSAAEELYQQGLISYPRTETERFRPEFDHHALLRDFCSLDEAAGPYASYANHLLNENGFQNPRAGQNDDQAHPPITPCKVVDPNTIQDHTQRNVYILVSKHYLACCSRDAVGRETSLTVRIASEEFTAKGLMIEQKNWLEIYHPWERWSTGQGELPHLMVGSRIAPHSLVMKEGQTTPPLPISEPELITLMDKAGIGTDATIAQHITTIQDRDYVTKDGNLRFLPTPLGIALVEGYNSMGYQLNKPDLRRETEHECNLVANRQKTKEEIVPLILNKMKDCYLKATRDARKLDQAMARHFQRIGAGNDHTEVVQAQFSTCGNCQQPMALKQERRXXXXXXXXXXXXXXXXXXDVPRKLLFCNACQEGYVMPRRGQLRPKTSEEGNNDNTPVKCPICNFQVISIVRGDGYEGNGYNICPKCYSDPPADHGXXXXXXXXTNHPCFSCSHPTCALAGGTQGGDIEVFACPF-CREKNITGGKVTLRKNTRGYV------------------LSCANYSARQRCSFTIWMPRASRSIEVPPGDEHVCTRCSTQSVVRKLTFQWKSGGVPPHM 926
[Close]
BLAST of jgi.p|Trimin1|170590 vs. uniprot
Match: A0A067D7B1_SAPPC (DNA topoisomerase n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067D7B1_SAPPC)

HSP 1 Score: 433 bits (1114), Expect = 7.610e-134
Identity = 266/660 (40.30%), Postives = 371/660 (56.21%), Query Frame = 1 
Query:   16 DQSIISYGPCQFPTLGFIVERYRRIQAFQREAFWSIAMEYCADAAGGARLPAPXXXXXXXXXXXXXXXXQATRASFMWERGRLFDRGVAAALAELCADAGTAVVTAVSARPQTRRRPLPMSTVELQRRASRFLRIPSERAMAAAEALYQRGVLSYPRTETDAFSRETDLAGLVGEFRGNAALGAYAAALLDGGAFEWPREGTNNDNAHPPIHPTASVDPATLHGD-ERGVYELVARHFLAACSRDARGQQTSVRAHMGEE-FSASGLMITERNWLEIYHPWERWSDKAIPTFTVGQEFVPTSLMLTEGRTEPPPLLSESDLIQLMDANRIGTDATIAEHIKKIQERGYAERCHES-RFRPTVLGLALVDGYEALGLKLSQPLLRQAQEQDCKLVARRELARADAIARCLSVMKPAFEKCVSDAHVLDAAIGAHFGALGARAAC-----VTAAFAACGNCGTRMDLRVT-DAGXXXXXXXXARPLLYCTTCRRGLPLPHRGEIALATPGVACPLCAYEVLEVRPGNGFEGNAYTICPWCYNNPPEEHGGAGVGTFPCFLCSADCPLAKKTGSDATPIAPCPLGCG-NSLSIRSAXXXXXXXXXXXXXXXXXXXXXXSLSCSGYPACRGAVWLPRVVASARPAESGAT-CARCGPNVRRLTL 1962
            +  ++S+G CQFPTLGF+V+R+  I+AF RE F+ I + +     G                             F W RGR++D   A AL E C +A  A + ++S +  ++R+P P++TVE Q+RASR+LRI SE+AM AAEALY RG+LSYPRTETD+F   TDL  L+    G+   G Y AAL +G  FE PR G ++D AHPPIHPT  V  ++L+ D ER VYELV RHFLA CS DARG QT+V   +  E F+ASGLMI  RN+L+IY  +E+W+   IP +  G  FVPT+L+L  G T PPPLL+ESDLI  MD + IGTDATIAEHI  I +R YA + + + +F+PT LGLALV  Y+ +G +L++P LR A E+DC  +A+ + +    +  C+  M+  ++  V+ + VLD     +FG     A       V  AF+ACG C   M+LR   D G           LL C  C     LP    I  +T    CPLC ++V++++   G   N Y++CP C+N+PP     A +   PC+ C+ADC LA  TG+  +P+  C   CG + + ++                         +SC+ Y +C+ +VWLP  +A A       T C+R    + R+TL
Sbjct:  207 ESKVVSFGSCQFPTLGFVVDRHLAIEAFVRELFYHIHVTHAIPDVGSI--------------------------VFTWGRGRVYDHIAALALYESCVEAQIATINSISKKDTSKRKPFPLTTVEFQKRASRWLRISSEQAMTAAEALYNRGLLSYPRTETDSFKEGTDLRALLDLHAGHETWGGYVAALQNG-KFEAPRSGKHDDQAHPPIHPTKCVPLSSLNNDVERRVYELVVRHFLACCSMDARGSQTNVTMTLASETFTASGLMILARNYLDIY-VYEKWAATVIPVYERGDRFVPTTLLLKRGETAPPPLLTESDLIAKMDTHGIGTDATIAEHINTILKRQYAIKVNNNTQFKPTELGLALVQTYDRMGYQLAKPDLRAAVERDCNAIAQGQKSCDQVVRSCMDQMRTIYQNVVARSGVLDETFQGYFGVANQDAGAGNSRVVDGAFSACGKCHQPMELRKKPDDGS----------LLVCRRCDDQYALPMLANIQKST--TRCPLCQFQVVDIQRSAGT--NVYSVCPHCFNHPPN----ARLNEMPCYSCTADCALA--TGTHDSPVVQCCFQCGGHPMKLKKTRTGKYV-----------------VSCTDYQSCKESVWLPSSIAYASVTSHPCTNCSRPQQTIHRVTL 801
[Close]
BLAST of jgi.p|Trimin1|170590 vs. uniprot
Match: K0TAA4_THAOC (DNA topoisomerase (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TAA4_THAOC)

HSP 1 Score: 425 bits (1093), Expect = 3.580e-132
Identity = 276/693 (39.83%), Postives = 365/693 (52.67%), Query Frame = 1 
Query:   13 LDQSIISYGPCQFPTLGFIVERYRRIQAFQREAFWSIAMEYCADAAGGA--RLPAPXXXXXXXXXXXXXXXXQATRASFMWERGRLFDRGVAAALAELCADAGTAVVTAVSARPQTRRRPLPMSTVELQRRASRFLRIPSERAMAAAEALYQRGVLSYPRTETDAFSRETDLAGLVGEFRG-NAALGAYAAALLDGGAFEWPREGTNNDNAHPPIHPTASVDPATLHGD-ERGVYELVARHFLAACSRDARGQQTSVRAHMG-EEFSASGLMITERNWLEIYHPWERWS--DKAIPTFTVGQEFVPTSLMLTEGRTEPPPLLSESDLIQLMDANRIGTDATIAEHIKKIQERGYAERCHESRFRPTVLGLALVDGYEALGLKLSQPLLRQAQEQDCKLVARRELARADAIARCLSVMKPAFEKCVSDAHVLDAAIGAHFGALG---ARAACVTAAFAACGNCGTRMDLRV--TDAGXXXXXXXXARP--LLYCTTCRRGLPLPH-RGEIALATPG----VACPLCAYEVLEVRPGNGFEGNAYTICPWCYNNPPEEHGGAGVGTFPCFLCS-ADCPLAKKTGSDATPIAPCPLGCGNSLSIRSAXXXXXXXXXXXXXXXXXXXXXXSLSCS--GYPACRGAVWLPRVVASARPAESG--------ATCARCGPNVRRLTLTLRRAGRPAYVPP 2001
            LDQ +ISYGPCQFPTLGF+VER+ RIQ F +E FW + M    +A G     +PA                 Q    S  W+R RL+DR +  A+ + C +AG AVVT VS RP+ + RP+P++TVELQ+RAS++LRI SE  M  AE+LY  G +SYPRTET+ F  E +   L+  F   N  LG YA  LL    F+ PR G N+DNAHPPI P  +V+P  +    ER +Y LV +H+LA CSRDA G++T +   +  EEFSA GLMI ERNWLEIYHPWE+WS     +P   VG    PTSLM+ +G T PP L+SE +LI  MD N IGTDATIA+HI  I +RGY  +    RF P  LG+ALV+GY ++G +L++P LR++ E +C  +A     +   +   +  M   F +  + A  LD A+  HFG LG   ++ + +   F+ CGNC   M L+   + AG          P  +++C TC +   +P     I     G     +CP+C ++VL        +G     CP CYNNPP  HGG+    F C  C+   CPLAK        + PCP  C +S                             LSCS  G  AC+  VWLP        A+S         A C  C  N  +L   LR   +   VPP
Sbjct:  271 LDQ-VISYGPCQFPTLGFVVERWARIQTFVKEDFWFLEMTIRLNADGSVVNNIPAQGVNNVYNNQQ------QGRAISLTWKRVRLYDRTMTLAIYDACLEAGEAVVTDVSGRPKNKWRPIPLATVELQKRASKYLRIGSEVLMQKAESLYNNGYISYPRTETERFRPEFNHHDLIQSFHAVNGELGNYAQLLLSNNNFQNPRAGPNDDNAHPPITPAKAVNPEEIADPIERNIYSLVVKHYLACCSRDAVGRETELTLKIASEEFSAKGLMILERNWLEIYHPWEKWSTGQGVLPKARVGTRITPTSLMMRDGATAPPNLISEVELISAMDKNGIGTDATIAQHITTILDRGYCVKDASQRFNPNPLGIALVEGYNSMGHQLNKPDLRRSMEAECNAIADGRKTKEAVLGSVVLQMLQCFNEANAKAAKLDEAMERHFGRLGTGNSQYSVLQGNFSRCGNCNGMMTLKQVRSSAGNQNPRNNNQAPSKIVHCQTCSQAHMMPKFHSNITPYFDGNQQPTSCPICQFQVLTCE----NDGRNSQFCPNCYNNPPANHGGSPSLEFQCSSCTHRSCPLAKGVQGGDVEVYPCPF-CTSS------------GNAGGRVLLKRSDNGYRLSCSNGGRDACQYTVWLPGEAREITLADSSVNVNRMSQAVCQTCT-NQSQLVRKLRFVWKQGTVPP 938
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|170590 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YM61_9STRA0.000e+0100.00DNA topoisomerase (Fragment) n=1 Tax=Tribonema min... [more]
D7FUP7_ECTSI3.430e-21146.27DNA topoisomerase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A1V9Z583_9STRA5.170e-14042.11DNA topoisomerase n=1 Tax=Achlya hypogyna TaxID=12... [more]
B7G3B1_PHATC1.280e-13939.37DNA topoisomerase n=2 Tax=Phaeodactylum tricornutu... [more]
A0A4D9CZ97_9STRA1.090e-13841.14DNA topoisomerase n=1 Tax=Nannochloropsis salina C... [more]
A0A7S2LVS8_9STRA4.140e-13840.32DNA topoisomerase n=1 Tax=Skeletonema marinoi TaxI... [more]
A0A1Z5KJN8_FISSO2.300e-13538.90DNA topoisomerase n=2 Tax=Fistulifera solaris TaxI... [more]
A0A7S4EJM4_9STRA1.770e-13439.72DNA topoisomerase n=1 Tax=Pseudo-nitzschia austral... [more]
A0A067D7B1_SAPPC7.610e-13440.30DNA topoisomerase n=3 Tax=Saprolegnia TaxID=4769 R... [more]
K0TAA4_THAOC3.580e-13239.83DNA topoisomerase (Fragment) n=1 Tax=Thalassiosira... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_74contigContig_74:172490..179595 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|170590|e_gw1.74.95.1
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400
KEGG ModuleM00414
KEGG Pathwayko03440,ko03460,map03440,map03460
KEGG koko:K03165
EC5.99.1.2
GOsGO:0000003,GO:0000278,GO:0000280,GO:0000712,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003917,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006259,GO:0006260,GO:0006265,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007127,GO:0007131,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016604,GO:0016605,GO:0016853,GO:0022402,GO:0022414,GO:0031974,GO:0031981,GO:0033554,GO:0034641,GO:0034645,GO:0035825,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045132,GO:0046483,GO:0048285,GO:0050896,GO:0051276,GO:0051304,GO:0051307,GO:0051321,GO:0051716,GO:0061982,GO:0070013,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0098813,GO:0140013,GO:0140097,GO:1901360,GO:1901363,GO:1901576,GO:1903046
Preferred nameTOP3A
DescriptionDNA topoisomerase type I activity
COG categoryL
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0550@1|root,KOG1956@2759|Eukaryota
Evalue5.63e-212
Seed ortholog2880.D7FUP7
Hectar predicted targeting categoryother localisation
TranscriptId170912
TrackFilteredModels1
ProteinId170590
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|170590gene_10523Tribonema minus UTEX_B_3156 geneContig_74 172490..179595 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|170590Trimin1|170590|e_gw1.74.95.1Tribonema minus UTEX_B_3156 polypeptideContig_74 172490..179595 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_10523_9exon_10523_9Tribonema minus UTEX_B_3156 exonContig_74 172490..172822 -
exon_10523_8exon_10523_8Tribonema minus UTEX_B_3156 exonContig_74 173409..173720 -
exon_10523_7exon_10523_7Tribonema minus UTEX_B_3156 exonContig_74 174595..174747 -
exon_10523_6exon_10523_6Tribonema minus UTEX_B_3156 exonContig_74 175090..175392 -
exon_10523_5exon_10523_5Tribonema minus UTEX_B_3156 exonContig_74 175905..176108 -
exon_10523_4exon_10523_4Tribonema minus UTEX_B_3156 exonContig_74 176729..176932 -
exon_10523_3exon_10523_3Tribonema minus UTEX_B_3156 exonContig_74 177461..177904 -
exon_10523_2exon_10523_2Tribonema minus UTEX_B_3156 exonContig_74 178515..178723 -
exon_10523_1exon_10523_1Tribonema minus UTEX_B_3156 exonContig_74 179412..179595 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_10523CDS_10523Tribonema minus UTEX_B_3156 CDSContig_74 179412..179595 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_10523 ID=mRNA_10523|Name=jgi.p|Trimin1|170590|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2346bp|location=Sequence derived from alignment at Contig_74:172490..179595- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CGCTTTGACGGGCTCGACCAGTCCATCATCAGCTACGGGCCGTGCCAGTT
CCCCACGCTCGGCTTCATCGTGGAGCGCTACAGGCGCATACAGGCGTTCC
AGCGTGAGGCGTTCTGGAGCATCGCCATGGAGTACTGCGCGGACGCCGCG
GGGGGCGCGCGCCTGCCCGCGCCGCCGCCGCCAGCGGCGCAGGGGGGGGG
CGGCGGCGCGGCGGCGGCGGCGCAGGCGACGCGCGCCTCGTTCATGTGGG
AGCGCGGCCGCCTGTTTGACAGGGGCGTCGCGGCGGCGCTGGCGGAGCTG
TGCGCGGACGCGGGCACGGCCGTCGTGACGGCGGTCTCGGCGCGGCCGCA
GACACGGCGGCGGCCGCTGCCGATGTCCACGGTGGAGCTGCAGCGGCGCG
CCTCGCGCTTCCTGCGCATCCCCTCGGAGCGCGCCATGGCCGCGGCGGAG
GCGCTGTACCAGCGCGGCGTCCTCTCGTACCCGCGCACGGAGACGGACGC
GTTCTCGCGCGAGACGGACCTCGCGGGGCTCGTGGGCGAGTTCCGTGGCA
ACGCGGCGCTCGGCGCGTACGCCGCCGCGCTGCTCGACGGCGGCGCCTTC
GAGTGGCCGCGCGAGGGCACGAACAACGACAACGCGCACCCGCCGATCCA
CCCGACCGCCAGCGTGGACCCCGCAACGCTGCACGGGGACGAGCGCGGCG
TGTACGAGCTGGTGGCGCGGCACTTCCTGGCGGCGTGCAGCCGCGACGCG
CGCGGCCAGCAGACGAGCGTGCGCGCGCACATGGGCGAGGAGTTCTCCGC
GTCGGGGCTCATGATCACGGAGCGGAACTGGCTAGAGATCTACCACCCCT
GGGAGCGCTGGAGCGACAAGGCGATCCCCACGTTCACCGTCGGGCAGGAG
TTTGTGCCCACCAGCCTCATGCTCACGGAGGGCCGCACGGAGCCGCCGCC
GCTGCTCAGCGAGTCCGACCTGATCCAGCTCATGGATGCGAACCGCATCG
GCACGGACGCGACCATCGCGGAGCACATCAAGAAGATACAGGAGCGCGGC
TACGCGGAGCGCTGCCACGAGAGCCGCTTCCGCCCGACCGTCCTCGGCCT
GGCGCTCGTGGACGGCTACGAGGCGCTGGGCCTCAAGCTCTCGCAGCCGC
TGCTGCGCCAGGCGCAGGAGCAGGACTGCAAGCTGGTGGCGCGGCGCGAG
CTCGCGCGTGCGGACGCCATCGCGCGCTGCCTCTCGGTCATGAAGCCGGC
GTTCGAGAAGTGCGTGAGCGACGCGCACGTGCTCGACGCGGCCATAGGCG
CGCACTTCGGCGCCCTCGGCGCGCGCGCGGCGTGCGTCACCGCCGCCTTC
GCCGCGTGCGGCAACTGCGGCACGCGCATGGACCTGCGCGTGACCGACGC
GGGCGGCGGCGGCGGCGGCGGCGGCGGCGCGCGGCCGCTGCTGTACTGCA
CGACGTGCCGGCGCGGGCTGCCGCTGCCGCACCGCGGCGAGATCGCGCTC
GCGACGCCCGGCGTCGCGTGCCCGCTGTGCGCATACGAGGTGCTGGAGGT
GCGGCCCGGCAACGGCTTTGAGGGCAACGCCTACACCATCTGCCCGTGGT
GCTACAACAACCCGCCGGAGGAGCATGGCGGTGCGGGCGTCGGCACTTTC
CCCTGCTTCCTGTGCTCCGCGGACTGCCCGCTCGCCAAGAAGACCGGCTC
GGACGCCACCCCCATCGCGCCGTGCCCGCTCGGCTGTGGCAACTCCCTGT
CCATTCGCAGCGCCTCCGCCGCCGCCGCCGCCGCGCCCGCCGCCGGCGCC
GCCGCCGCCCCCGCCGCCACCACCTCCATCTCCCTCAGCTGCAGCGGCTA
CCCGGCGTGCCGCGGCGCCGTCTGGCTGCCGCGCGTCGTCGCATCGGCGC
GGCCCGCGGAGAGCGGCGCGACGTGCGCGCGCTGCGGCCCCAACGTGCGG
CGCTTGACGCTCACGCTGCGCCGCGCGGGGCGCCCCGCGTACGTGCCGCC
GCTGCTCGAGGAGCGCAGAGGTGGCGGCAGCGGGCGCGGCGAAGACAGAC
AGCGCGCCGGAGGCGGCGGCGGCAGAGCTGCTGTAGCGGCCGCTGCTGCT
GCCGCGGGCGAGCGCGAGTGCGGCTGCGGCGCGCCCGCCCCCAAGATCAC
CGTACGCAAGGACGGTCCGAACCAGGGGCGCAACTTCTTCAAGTGCGCCA
CTGGGGAGTGCGCATTTTGGGAGTGGGAGCACGACAACTGGCCGGAGGGC
GGCGGCGGCGGCGGCCGGGGAGGCGGGCGCGGCGATGGTAGAAGGGGGGG
TGCAGGCGGGGGTAGAGGGGGAGGGCGCCGGGGCGGCAGAGGTTGA
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protein sequence of jgi.p|Trimin1|170590

>Trimin1|170590|e_gw1.74.95.1 ID=Trimin1|170590|e_gw1.74.95.1|Name=jgi.p|Trimin1|170590|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=782bp
RFDGLDQSIISYGPCQFPTLGFIVERYRRIQAFQREAFWSIAMEYCADAA
GGARLPAPPPPAAQGGGGGAAAAAQATRASFMWERGRLFDRGVAAALAEL
CADAGTAVVTAVSARPQTRRRPLPMSTVELQRRASRFLRIPSERAMAAAE
ALYQRGVLSYPRTETDAFSRETDLAGLVGEFRGNAALGAYAAALLDGGAF
EWPREGTNNDNAHPPIHPTASVDPATLHGDERGVYELVARHFLAACSRDA
RGQQTSVRAHMGEEFSASGLMITERNWLEIYHPWERWSDKAIPTFTVGQE
FVPTSLMLTEGRTEPPPLLSESDLIQLMDANRIGTDATIAEHIKKIQERG
YAERCHESRFRPTVLGLALVDGYEALGLKLSQPLLRQAQEQDCKLVARRE
LARADAIARCLSVMKPAFEKCVSDAHVLDAAIGAHFGALGARAACVTAAF
AACGNCGTRMDLRVTDAGGGGGGGGGARPLLYCTTCRRGLPLPHRGEIAL
ATPGVACPLCAYEVLEVRPGNGFEGNAYTICPWCYNNPPEEHGGAGVGTF
PCFLCSADCPLAKKTGSDATPIAPCPLGCGNSLSIRSASAAAAAAPAAGA
AAAPAATTSISLSCSGYPACRGAVWLPRVVASARPAESGATCARCGPNVR
RLTLTLRRAGRPAYVPPLLEERRGGGSGRGEDRQRAGGGGGRAAVAAAAA
AAGERECGCGAPAPKITVRKDGPNQGRNFFKCATGECAFWEWEHDNWPEG
GGGGGRGGGRGDGRRGGAGGGRGGGRRGGRG*
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mRNA from alignment at Contig_74:172490..179595-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_10523 ID=mRNA_10523|Name=jgi.p|Trimin1|170590|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7106bp|location=Sequence derived from alignment at Contig_74:172490..179595- (Tribonema minus UTEX_B_3156 )
CGCTTTGACGGGCTCGACCAGTCCATCATCAGCTACGGGCCGTGCCAGTT
CCCCACGCTCGGCTTCATCGTGGAGCGCTACAGGCGCATACAGGCGTTCC
AGCGTGAGGCGTTCTGGAGCATCGCCATGGAGTACTGCGCGGACGCCGCG
GGGGGCGCGCGCCTGCCCGCGCCGCCGCCGCCAGGTGAGCTGAGCATCTG
ACGTCTGCCGCGTGCTGAGTGTCCACTGTCTGCTGCGCACAGGCATGCAT
TCAAAAGCGGGGGGGGGGGGGGGGGGCTGCGTGCGCCGCCCAGTGCGCTG
CGCATGTGACGTGTGCTGCGTGTAGGCATGAACCTGAGGGCACCATTGTG
TTGTGAGGGCGCAGCCGCAGGTGCCGTTCCGAGCGGATGAGCATGTGATG
CACGGTGTATGTAGGTGTGTGAAGGGAACGTCTTCATGGACAGCAGATGC
GTGGCGGCAGCAGACGCCGCCCGTTGAACACAGCGCTGGTGGAGTGGACG
TCAGTGGTGCTGCCTTGAGGGTACAGCTGTGCTTCTCTGAGAGGGAGAGT
GCAATATACATTTCAGAAGTTTCCCAAGAAGTGGGCAAAGTCCTCCTGCA
CCGCGCAATGAAACAAGGAGTGCATGTCACCTCACGCAGATTCCACAAAA
CGCAAAATATTTACATTTCAGATGTTTCCCAAGAAGTGGGCAAAGTCCTC
CTGCACCGCGCAATGAAACAAGGAGTGCATGTCACCTCACGCAGATTCCA
CAAAACGCACCGACTGCGATCCTCGTGTTGTTTTGTCACGCCATGCCCCC
CCTCCCGCGCCCACAATTCTCACCCCGCCGGCCCTGTCCGTGCCCCTGCA
GACAACCCATACGGCGACGGAGCGGCGCAGGGGGGGGGCGGCGGCGCGGC
GGCGGCGGCGCAGGCGACGCGCGCCTCGTTCATGTGGGAGCGCGGCCGCC
TGTTTGACAGGGGCGTCGCGGCGGCGCTGGCGGAGCTGTGCGCGGACGCG
GGCACGGCCGTCGTGACGGCGGTCTCGGCGCGGCCGCAGACACGGCGGCG
GCCGCTGCCGATGTCCACGGTGGAGCTGCAGGTGAGCGCGCGCAAGTGTG
CGAGCAGGGGAGGGGGGGGGGGCACGCGGCACCGCGCAGGTGAACAGCAC
CGCAGCGAGCGCTGCGGTGATCGGACGCCCCGTCGTCTACATACCTCAGC
GCACTTTATACATTACATGTACGCAGCACATACAACAACACCTCGTAGTA
GTACGCCACCGCACCGCTGTCGCTTCCTGTCTGGGCTGGCTAGCGGGGAC
CATGGTGGAGGCAGAATCATGGTCATCACCAGAGACGTCGAGGAACGTTG
CGGTCGACGATTGCCGCTGCCGGCGTCGCCCGCGGCGGCGCTGCGCGAGC
AGCGCGCGCACACGACACGGCAGCGCCCGGAGCGACGGGCGCGTGGCCCG
CACTGCGCTCTTCGCGTGGCGCATCGGCTGCACCATAGCATGATGCCGCT
GCGCCGCCGGATTCGCGTGCGTGCGCGTGCGTAGTGTCGCTGCCGCTGCC
GCTGCCGCGGAGCGCCGAGCTCAGCAGGTGGCAGCGCTCGCTTTGTCCAC
GAATCAGCCAGCGCAGGACTGATGCGAGGTGACGGCACGGTGTGCCCCCC
CCCCCTCCCCCCTTCCCCGCCCCCTTCCCCGCCCCCCGCAGCGGCGCGCC
TCGCGCTTCCTGCGCATCCCCTCGGAGCGCGCCATGGCCGCGGCGGAGGC
GCTGTACCAGCGCGGCGTCCTCTCGTACCCGCGCACGGAGACGGACGCGT
TCTCGCGCGAGACGGACCTCGCGGGGCTCGTGGGCGAGTTCCGTGGCAAC
GCGGCGCTCGGCGCGTACGCCGCCGCGCTGCTCGACGGCGGCGCCTTCGA
GTGGCCGCGCGAGGGCACGAACAACGACAACGCGCACCCGCCGATCCACC
CGACCGCCAGCGTGGACCCCGCAACGCTGCACGGGGACGAGCGCGGCGTG
TACGAGCTGGTGGCGCGGCACTTCCTGGCGGCGTGCAGCCGCGACGCGCG
CGGCCAGCAGACGAGCGTGCGCGCGCACATGGGCGAGGAGTTCTCCGCGT
CGGGGCTCATGATCACGGAGCGGAACTGGCTAGAGGTGCTTGCGCGCATG
CACGTAGCGCGTTATGCGTGCGCGTCTGTGTGTGTGTGTGTGTGTGTGTG
GTTGTCAGTGTGTCAAGGAACGGAGGCATGCGCCCGTGTGAGTGTGTGTG
TGTGTGTGTTTGCGCGCACGGCTCGTGTGGTTGTCTTTGTGCGGATGCGA
TGCAGGAGCATGCGTGGGGGAAGGGGTGGGCAGATGGGGGGGGCGAATGG
GGTGTGGGGGGGTGGGCGTGCTGTGCCGGCGCCTGTGCTGCGATGCGCGC
ACTACTGCTAAATTGAACCTGAAGCATTGGCAGCGCAGTCAAGTTGACAA
AAGCGCTGACATGTTCATGCTGATCCCACAATACTGTAACACACACACAC
ACACACACACACAGCGCACTTGCAAGTGAGCGACGGCAGTACATATGTAA
AACACCGCAGCGCGGCCACTCGACGACTGCGAGGCAGGCGGCGGCGCGCA
ACGCCGCTGCCGCGCGAAGCGTCAGCTGCTCAGCCCCCGCCGCCGCCGCT
GCCGCCGCCGCAGATCTACCACCCCTGGGAGCGCTGGAGCGACAAGGCGA
TCCCCACGTTCACCGTCGGGCAGGAGTTTGTGCCCACCAGCCTCATGCTC
ACGGAGGGCCGCACGGAGCCGCCGCCGCTGCTCAGCGAGTCCGACCTGAT
CCAGCTCATGGATGCGAACCGCATCGGCACGGACGCGACCATCGCGGAGC
ACATCAAGAAGATACAGGTGAGGGCGCGCGCGCGCTGCGGCGGCGGCGGC
GGCTGCGGCTGAGAGGCGCCGCGGTGCAGATGGCCTGGGTGCGGGCGTGC
ATGTGCTACGGCAGTGCTCCGGAACAAGGTTGGCGGCGGTGTAGAAGCGC
GGAGAGCGGTGCCACTAGCGACAGCAGCCCTGCGCTGACGGCGTCCGTTC
GAGCGGCGAGCACGTCGCTGCCCACAAGTCGTTCGCGCTGTAACAACGGC
CTCAGGCGCGCACAGGACGACTGCTGACGACTCTACTGCGGTTCACAGCA
TCGGCGCATCCACGTCCAGCCCTGAGTCTGCCAGAATTGCAGCAAGCTGT
AGAGGCTGACGTGAGCCAGGGCACAGATACCGTCGCCACGCGCGCGCGCA
TGATGTGATGTGATGACGAGCACGGTGCCAGCTCGTGTCCCAAAGTGCTG
CCAAGACGCAGGATGCGTGTGCCCCGACACACGAGCGCGCCGCAGGCGCG
CGGCGACGCCGAGCGCCATTGCGCAATTACAAGTGCCGCTTCCGCTTGCG
GGAGCTATAATTGAATGACTTTTAAGCCCTCGATGACGCACGCCCGCTGC
CGCACCCCCGCGCCGCGCCGCGCCGCCGCCGCCGCAGGAGCGCGGCTACG
CGGAGCGCTGCCACGAGAGCCGCTTCCGCCCGACCGTCCTCGGCCTGGCG
CTCGTGGACGGCTACGAGGCGCTGGGCCTCAAGCTCTCGCAGCCGCTGCT
GCGCCAGGCGCAGGAGCAGGACTGCAAGCTGGTGGCGCGGCGCGAGCTCG
CGCGTGCGGACGCCATCGCGCGCTGCCTCTCGGTCATGAAGGTGCGCCCG
CCGTGGGGGGGCGGGGGTGGGGGGTGGGGGGGGGGGGGGCGCTGCTTGCC
GAAGTCGTGTCGAAGGCGGTCTCGGCTGGCGTGATTGTTGGAGCTCGGTG
ATTGGCCAGGCGGGCGGTTTCGCTTTGCTGATGCCGTTCGTTGTGCTACC
TGGGTGTGCGCTGATGTGTGAGCTGGTAATGCCAACACCGCCCGGGATGC
TGCCTCCGACATTGAGTTCGCACCCTCAGATGAGTAGCAGAGGCCGCCGT
TTGCTGCCTCTTTGTGCCACGCCACGGCGCCGTCACCATAGACGCCCCTT
ACAATAGCATTCAGCGGCAGCGCCAAACGGTTAGAGGGCGTCGCTGGCTG
CCCTGAGGGCCAGTGATGTGTGTCACGAGCCCACCGTAGCCGCGCCGCAC
CCTATCACGGTCAACCTCAACTACCCCCTGAGCATGTATTTCTTCCCCCC
CGCCCCCCCATCCCCCCCCCCACCCCCCGGCCTCCTCCCCGCTCTCGCTT
CAGCCGGCGTTCGAGAAGTGCGTGAGCGACGCGCACGTGCTCGACGCGGC
CATAGGCGCGCACTTCGGCGCCCTCGGCGCGCGCGCGGCGTGCGTCACCG
CCGCCTTCGCCGCGTGCGGCAACTGCGGCACGCGCATGGACCTGCGCGTG
ACCGACGCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGCGCGGCCGCTGCT
GTACTGCACGACGTGCCGGCGCGGGCTGCCGCTGCCGCACCGCGGCGAGA
TCGCGCTCGCGACGCCCGGCGTCGCGTGCCCGCTGTGCGCATACGAGGTG
CTGGAGGTGCGTGCGCGAGGGGATGAAATGAGCTGCGGGCCCGCCCACGG
CGGCAGCGGCGCGGCACGACAGCTCCGACCGTTTGCACGGCAAGCGCATC
GCCCCCTCCGCAGCGCATTGCGTGCGGACGTGGCGTGATGATGCTCTGTC
ATTATGGCCAGCGTAGTGAGCAGCGGAGCCATTTGCCGCGACCTCGCGGT
ACGCGCACCGCCTCAGCGCCTTGCCTTACGCTGTGTCCAAGCCCCCACAA
CAGACAACGCCTTTGCTGAACGTGAACACTTGCCAACAACACGCTAACTA
CACTTCTGCCGCTCAACTTCTGCTGCCGCCGTCGCCGCGCAAGAGCAGGT
GCGGCCCGGCAACGGCTTTGAGGGCAACGCCTACACCATCTGCCCGTGGT
GCTACAACAACCCGCCGGAGGAGCATGGCGGTGCGGGCGTCGGCACTTTC
CCCTGCTTCCTGTGCTCCGCGGACTGCCCGCTCGCCAAGAAGACCGGCTC
GGTGAGTGTCGCATGAACTGTACATGGTGTCTGTGTATGTGCTTGCGCCA
CCGAGCGTTGGACAAAGAGGGGGAGGGGGGGGGGGGGGCAATTGCTGCGC
AGGCATGATGGGGTTTGCGGTTACACGTGCGAACTTGAGGCGCATGCGGT
GACGTCGTGGTGGTTGTGGTCAGCGCTCGGCGGCAGTTTAGAGAAAGGCT
GCAGTGTTGATCCCATGAGGGCGACGACCGTTGACATTTGCACCAGCACA
ATTGCCTACATGTTGCAGTTTCTAGCAGTCTGATTTGCACGTCTTAATAC
AGTACGTGGCCAGTGGCTGTTGCTTGAATAGAGCCAGCCCGCGTCCGACT
TCGTTTCATGCCATTCTCATCGAGCCTTGTGCACATTCCTGCTACTGACT
CGGAGAGCTTCAGTGCTCACATCAGCCTGGCAATTGCTGACTGTAGAATG
GCCATACGAATGTCAGCGTGACACTGCAGTATCGGCTATGCCCCATACCC
CTCGTGGGTTTGCTGTCATTGTCATTTCTCGAATGCAGCTGGTGCTTGTC
ATTTCGCGAATGCAGCTGGTGCTTGTCCAATGGAGCTATGCGGGTACTGC
ATCTCGACTTGAGACGGGCAATGCCCATGAACAATAATGAACATGAATGG
TACTGGGCAGTCGTCGAGCAGCTTGCCAACATCAGAGCCAACACTGCCAT
GCCCGCTTCCCCAGCATTGCCAGCATGACCGTCAACAATGCCCCTGCTGC
ATGGCAATTGCAAGCGCTAGGTTGTCATACTCGGCTAACCGTCCAGCAGC
TGCAGCACAGCATGTCGTATGTGCAAACGTCATGCGTGGTGTGTCCCCCC
CCCCCTCCGCTCCCCTACGCCACAGGACGCCACCCCCATCGCGCCGTGCC
CGCTCGGCTGTGGCAACTCCCTGTCCATTCGCAGCGCCTCCGCCGCCGCC
GCCGCCGCGCCCGCCGCCGGCGCCGCCGCCGCCCCCGCCGCCACCACCTC
CATCTCCCTCAGCTGCAGCGGCTACCCGGCGTGCCGCGGCGCCGTCTGGC
TGCCGCGCGTCGTCGCATCGGCGCGGCCCGCGGAGAGCGGCGCGACGTGC
GCGCGCTGCGGCCCCAACGTGCGGCGCTTGACGCTCACGCTGCGCCGCGC
GGGGCGCCCCGCGTACGTGCCGCCGCTGCTCGAGGAGGTGTGCCCGCTGT
GCGACGACACGCTGGCGGAGCTGCGCGGCGGTGGCGGCGGCGGCGGCGGC
GGGGCGAGGGCGGCGGCTGCGGCGACGCCGCGCGGGGGGCGGCAGGGCGG
CGCCGCCGCGTCCGCAGGGGCGGGGCGCCGCGGCGGCGGCAGCGGCAGGG
GCGGCAGCGGCGGCAGAGGTGGTGCAGCGCGGGGTGCAGCGGGGACTGGG
CTTGCCACGCGCAGCAACGGCGCCACTGCTGCTTCCCGAGCAGGCCGTGG
CGATGGCGGCGGTCGCGGTGGCGGCGCCACCAGGAACAGGTGAGCATCGG
AATAGTCGCTTCTTGGGCTTGTCATGGCTGTGTTGAGGTTGCCTTTTGGC
AGCGGCCAGGGAGTGCGGGATGAGAACTGAGATGCGAGAACCACTTCAGG
GAGCTGCTTCACTGCAACACTGCCTTTGCCTACACCTCAAAACAGCTTAG
TGGCATTGGCAGGGCACAGCATCCCTGAGCGTTGTTAGGGCCAAGCGTGT
CACACCGCACTGCGCCGGCGGTCAAAGAGCTCATCGCACGTGCCGCTTCT
TACATAGCATGCCCGGCTCTGAGCGCAGAGGTGGCGGCAGCGGGCGCGGC
GAAGACAGACAGCGCGCCGGAGGCGGCGGCGGCAGAGCTGCTGTAGCGGC
CGCTGCTGCTGCCGCGGGCGAGCGCGAGTGCGGCTGCGGCGCGCCCGCCC
CCAAGATCACCGTACGCAAGGACGGTCCGAACCAGGGGCGCAACTTCTTC
AAGTGCGCCACTGGGGAGTGCGCATTTTGGGAGTGGGAGCACGACAACTG
GCCGGAGGGCGGCGGCGGCGGCGGCCGGGGAGGCGGGCGCGGCGATGGTA
GAAGGGGGGGTGCAGGCGGGGGTAGAGGGGGAGGGCGCCGGGGCGGCAGA
GGTTGA
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Coding sequence (CDS) from alignment at Contig_74:172490..179595-

>mRNA_10523 ID=mRNA_10523|Name=jgi.p|Trimin1|170590|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2346bp|location=Sequence derived from alignment at Contig_74:172490..179595- (Tribonema minus UTEX_B_3156 )
CGCTTTGACGGGCTCGACCAGTCCATCATCAGCTACGGGCCGTGCCAGTT
CCCCACGCTCGGCTTCATCGTGGAGCGCTACAGGCGCATACAGGCGTTCC
AGCGTGAGGCGTTCTGGAGCATCGCCATGGAGTACTGCGCGGACGCCGCG
GGGGGCGCGCGCCTGCCCGCGCCGCCGCCGCCAGCGGCGCAGGGGGGGGG
CGGCGGCGCGGCGGCGGCGGCGCAGGCGACGCGCGCCTCGTTCATGTGGG
AGCGCGGCCGCCTGTTTGACAGGGGCGTCGCGGCGGCGCTGGCGGAGCTG
TGCGCGGACGCGGGCACGGCCGTCGTGACGGCGGTCTCGGCGCGGCCGCA
GACACGGCGGCGGCCGCTGCCGATGTCCACGGTGGAGCTGCAGCGGCGCG
CCTCGCGCTTCCTGCGCATCCCCTCGGAGCGCGCCATGGCCGCGGCGGAG
GCGCTGTACCAGCGCGGCGTCCTCTCGTACCCGCGCACGGAGACGGACGC
GTTCTCGCGCGAGACGGACCTCGCGGGGCTCGTGGGCGAGTTCCGTGGCA
ACGCGGCGCTCGGCGCGTACGCCGCCGCGCTGCTCGACGGCGGCGCCTTC
GAGTGGCCGCGCGAGGGCACGAACAACGACAACGCGCACCCGCCGATCCA
CCCGACCGCCAGCGTGGACCCCGCAACGCTGCACGGGGACGAGCGCGGCG
TGTACGAGCTGGTGGCGCGGCACTTCCTGGCGGCGTGCAGCCGCGACGCG
CGCGGCCAGCAGACGAGCGTGCGCGCGCACATGGGCGAGGAGTTCTCCGC
GTCGGGGCTCATGATCACGGAGCGGAACTGGCTAGAGATCTACCACCCCT
GGGAGCGCTGGAGCGACAAGGCGATCCCCACGTTCACCGTCGGGCAGGAG
TTTGTGCCCACCAGCCTCATGCTCACGGAGGGCCGCACGGAGCCGCCGCC
GCTGCTCAGCGAGTCCGACCTGATCCAGCTCATGGATGCGAACCGCATCG
GCACGGACGCGACCATCGCGGAGCACATCAAGAAGATACAGGAGCGCGGC
TACGCGGAGCGCTGCCACGAGAGCCGCTTCCGCCCGACCGTCCTCGGCCT
GGCGCTCGTGGACGGCTACGAGGCGCTGGGCCTCAAGCTCTCGCAGCCGC
TGCTGCGCCAGGCGCAGGAGCAGGACTGCAAGCTGGTGGCGCGGCGCGAG
CTCGCGCGTGCGGACGCCATCGCGCGCTGCCTCTCGGTCATGAAGCCGGC
GTTCGAGAAGTGCGTGAGCGACGCGCACGTGCTCGACGCGGCCATAGGCG
CGCACTTCGGCGCCCTCGGCGCGCGCGCGGCGTGCGTCACCGCCGCCTTC
GCCGCGTGCGGCAACTGCGGCACGCGCATGGACCTGCGCGTGACCGACGC
GGGCGGCGGCGGCGGCGGCGGCGGCGGCGCGCGGCCGCTGCTGTACTGCA
CGACGTGCCGGCGCGGGCTGCCGCTGCCGCACCGCGGCGAGATCGCGCTC
GCGACGCCCGGCGTCGCGTGCCCGCTGTGCGCATACGAGGTGCTGGAGGT
GCGGCCCGGCAACGGCTTTGAGGGCAACGCCTACACCATCTGCCCGTGGT
GCTACAACAACCCGCCGGAGGAGCATGGCGGTGCGGGCGTCGGCACTTTC
CCCTGCTTCCTGTGCTCCGCGGACTGCCCGCTCGCCAAGAAGACCGGCTC
GGACGCCACCCCCATCGCGCCGTGCCCGCTCGGCTGTGGCAACTCCCTGT
CCATTCGCAGCGCCTCCGCCGCCGCCGCCGCCGCGCCCGCCGCCGGCGCC
GCCGCCGCCCCCGCCGCCACCACCTCCATCTCCCTCAGCTGCAGCGGCTA
CCCGGCGTGCCGCGGCGCCGTCTGGCTGCCGCGCGTCGTCGCATCGGCGC
GGCCCGCGGAGAGCGGCGCGACGTGCGCGCGCTGCGGCCCCAACGTGCGG
CGCTTGACGCTCACGCTGCGCCGCGCGGGGCGCCCCGCGTACGTGCCGCC
GCTGCTCGAGGAGCGCAGAGGTGGCGGCAGCGGGCGCGGCGAAGACAGAC
AGCGCGCCGGAGGCGGCGGCGGCAGAGCTGCTGTAGCGGCCGCTGCTGCT
GCCGCGGGCGAGCGCGAGTGCGGCTGCGGCGCGCCCGCCCCCAAGATCAC
CGTACGCAAGGACGGTCCGAACCAGGGGCGCAACTTCTTCAAGTGCGCCA
CTGGGGAGTGCGCATTTTGGGAGTGGGAGCACGACAACTGGCCGGAGGGC
GGCGGCGGCGGCGGCCGGGGAGGCGGGCGCGGCGATGGTAGAAGGGGGGG
TGCAGGCGGGGGTAGAGGGGGAGGGCGCCGGGGCGGCAGAGGTTGA
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