Trimin1|350675|estExt_Genemark1.C_Ctg_680092 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350675
Unique NameTrimin1|350675|estExt_Genemark1.C_Ctg_680092
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length609
Homology
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BLAST of jgi.p|Trimin1|350675 vs. uniprot
Match: A0A835YLS2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS2_9STRA)

HSP 1 Score: 806 bits (2081), Expect = 5.970e-288
Identity = 608/608 (100.00%), Postives = 608/608 (100.00%), Query Frame = 0 
Query:    1 MHNGTDTEDDLVELLNEFGTIRLDTDLQSGLLDPHRLLSFVSSYRRQASYGASDSASDADEGDSSGTDTDEEANSDERFRELEDVVRKSAAFVNASTASDSSSGPVQACRQRFSGFAAAPATAAVPACCADAAVAAHALFKNCSGTITRRCCGSGISARKRPGAXXXXXXXXXXXXXXXXXXXXXXXXXYEEQPWLRAHDGAADDGXXDNDAQSDAYLASPRLAFGAELSVSGSGRGEAGPSYAMPTKNFMSKVGRDPGSGWRAGEGSVTAGADLERLQQHDRERRVCLEENRKAKLRLEGQRRTIRELEHVVATLRQELAEAKADGAAAAKRPAAAPCALCRGXXXXXXXXXXXXXXXXXXXXXXXRKSAAAAEAEAERQXXXXXXXXXXXXXXXXXXXXXXXREASAVLKRSLRAAQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLRAGGAEAERDACMLRLAALQRQVSRLEGELASAAAATHLRHADDIASRALRSWKLESAAARIARRPTPXXXXXXXXAVHVANRDPSNASVSEGAAVGDGGDSIASAALSDRYHKLQSLYKRVYRR 608
            MHNGTDTEDDLVELLNEFGTIRLDTDLQSGLLDPHRLLSFVSSYRRQASYGASDSASDADEGDSSGTDTDEEANSDERFRELEDVVRKSAAFVNASTASDSSSGPVQACRQRFSGFAAAPATAAVPACCADAAVAAHALFKNCSGTITRRCCGSGISARKRPGAXXXXXXXXXXXXXXXXXXXXXXXXXYEEQPWLRAHDGAADDGXXDNDAQSDAYLASPRLAFGAELSVSGSGRGEAGPSYAMPTKNFMSKVGRDPGSGWRAGEGSVTAGADLERLQQHDRERRVCLEENRKAKLRLEGQRRTIRELEHVVATLRQELAEAKADGAAAAKRPAAAPCALCRGXXXXXXXXXXXXXXXXXXXXXXXRKSAAAAEAEAERQXXXXXXXXXXXXXXXXXXXXXXXREASAVLKRSLRAAQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLRAGGAEAERDACMLRLAALQRQVSRLEGELASAAAATHLRHADDIASRALRSWKLESAAARIARRPTPXXXXXXXXAVHVANRDPSNASVSEGAAVGDGGDSIASAALSDRYHKLQSLYKRVYRR
Sbjct:    1 MHNGTDTEDDLVELLNEFGTIRLDTDLQSGLLDPHRLLSFVSSYRRQASYGASDSASDADEGDSSGTDTDEEANSDERFRELEDVVRKSAAFVNASTASDSSSGPVQACRQRFSGFAAAPATAAVPACCADAAVAAHALFKNCSGTITRRCCGSGISARKRPGAXXXXXXXXXXXXXXXXXXXXXXXXXYEEQPWLRAHDGAADDGXXDNDAQSDAYLASPRLAFGAELSVSGSGRGEAGPSYAMPTKNFMSKVGRDPGSGWRAGEGSVTAGADLERLQQHDRERRVCLEENRKAKLRLEGQRRTIRELEHVVATLRQELAEAKADGAAAAKRPAAAPCALCRGXXXXXXXXXXXXXXXXXXXXXXXRKSAAAAEAEAERQXXXXXXXXXXXXXXXXXXXXXXXREASAVLKRSLRAAQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLRAGGAEAERDACMLRLAALQRQVSRLEGELASAAAATHLRHADDIASRALRSWKLESAAARIARRPTPXXXXXXXXAVHVANRDPSNASVSEGAAVGDGGDSIASAALSDRYHKLQSLYKRVYRR 608
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350675 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YLS2_9STRA5.970e-288100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 436..470
NoneNo IPR availableCOILSCoilCoilcoord: 408..428
NoneNo IPR availableCOILSCoilCoilcoord: 292..333
NoneNo IPR availableCOILSCoilCoilcoord: 371..405
NoneNo IPR availableCOILSCoilCoilcoord: 492..519
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 378..401
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 548..563
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 382..401
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 544..583

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_68contigContig_68:627222..633519 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350675mRNA_8533Tribonema minus UTEX_B_3156 mRNAContig_68 627037..633519 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350675|estExt_Genemark1.C_Ctg_680092 ID=Trimin1|350675|estExt_Genemark1.C_Ctg_680092|Name=jgi.p|Trimin1|350675|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=609bp
MHNGTDTEDDLVELLNEFGTIRLDTDLQSGLLDPHRLLSFVSSYRRQASY
GASDSASDADEGDSSGTDTDEEANSDERFRELEDVVRKSAAFVNASTASD
SSSGPVQACRQRFSGFAAAPATAAVPACCADAAVAAHALFKNCSGTITRR
CCGSGISARKRPGAAASAADAAQAQQRRQQSPRRRQPPPYEEQPWLRAHD
GAADDGAADNDAQSDAYLASPRLAFGAELSVSGSGRGEAGPSYAMPTKNF
MSKVGRDPGSGWRAGEGSVTAGADLERLQQHDRERRVCLEENRKAKLRLE
GQRRTIRELEHVVATLRQELAEAKADGAAAAKRPAAAPCALCRGGAAQRA
AAPAAAAAEERAITAALRKSAAAAEAEAERQAATARAAEAERQVTEARAT
EARRREASAVLKRSLRAAQERAEAAEAHATGLAAAVAQAKRAAAEQRKEA
RAAARLARRWAARAAELEAEAGGARAAAADASLRAGGAEAERDACMLRLA
ALQRQVSRLEGELASAAAATHLRHADDIASRALRSWKLESAAARIARRPT
PAPPPPPPPAVHVANRDPSNASVSEGAAVGDGGDSIASAALSDRYHKLQS
LYKRVYRR*
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