Trimin1|350606|estExt_Genemark1.C_Ctg_670057 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350606
Unique NameTrimin1|350606|estExt_Genemark1.C_Ctg_670057
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length200
Homology
BLAST of jgi.p|Trimin1|350606 vs. uniprot
Match: A0A836CA09_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA09_9STRA)

HSP 1 Score: 394 bits (1012), Expect = 1.130e-138
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
Query:    1 MVPRVWRVINKPLEKKQVSSHSGANAANGALHVTIPAPLELHRSMIVILFILRRLRAVIFKNDPAHVLMSLPGNKSVQVHIDNYTDFINELGCLHLALNRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSMLHGADMTYDKMCDFSAQAKRGRITAAPQQQGSGGTGR 199
            MVPRVWRVINKPLEKKQVSSHSGANAANGALHVTIPAPLELHRSMIVILFILRRLRAVIFKNDPAHVLMSLPGNKSVQVHIDNYTDFINELGCLHLALNRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSMLHGADMTYDKMCDFSAQAKRGRITAAPQQQGSGGTGR
Sbjct:    1 MVPRVWRVINKPLEKKQVSSHSGANAANGALHVTIPAPLELHRSMIVILFILRRLRAVIFKNDPAHVLMSLPGNKSVQVHIDNYTDFINELGCLHLALNRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSMLHGADMTYDKMCDFSAQAKRGRITAAPQQQGSGGTGR 199          
BLAST of jgi.p|Trimin1|350606 vs. uniprot
Match: A0A835YWP9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWP9_9STRA)

HSP 1 Score: 367 bits (941), Expect = 1.370e-126
Identity = 190/199 (95.48%), Postives = 192/199 (96.48%), Query Frame = 0
Query:    2 VPRVWRVINKPLEKKQVSSHSGANAA-NGALHVTIPAPLELHRSMIVILFILRRLRAVIFKNDPAHVLMSLPGNKSVQVHIDNYTDFINELGCLHLALNRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSMLHGADMTYDKMCDFSAQAKRGRITAAPQQQGSGGTGR 199
            VPRVWRVINKPLEKKQVSSHSGANAA NGALHVTIPAPLELH+ MIVILFILRRLRAVIFKNDPAHVLM LPGNKSVQVHIDNYTDFINELG LHLAL+RYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSML GADMTYDKMCDFSAQAKRGRITAA QQQGSG TGR
Sbjct:   83 VPRVWRVINKPLEKKQVSSHSGANAAINGALHVTIPAPLELHQPMIVILFILRRLRAVIFKNDPAHVLMGLPGNKSVQVHIDNYTDFINELGRLHLALDRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSMLPGADMTYDKMCDFSAQAKRGRITAATQQQGSGSTGR 281          
BLAST of jgi.p|Trimin1|350606 vs. uniprot
Match: A0A835YLW9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLW9_9STRA)

HSP 1 Score: 344 bits (882), Expect = 1.190e-116
Identity = 175/192 (91.15%), Postives = 178/192 (92.71%), Query Frame = 0
Query:    7 RVINKPLEKKQVSSHSGANAANGALHVTIPAPLELHRSMIVILFILRRLRAVIFKNDPAHVLMSLPGNKSVQVHIDNYTDFINELGCLHLALNRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSMLHGADMTYDKMCDFSAQAKRGRITAAPQQQGSGGTG 198
            +VINKPLEKKQVSSHSGANAANGALHVTIPAPLELHRSMIVILFILRRLRAVIFKNDPAHVLM LPGNKSVQ HIDNYTDFINELGCLHLALNRYGIYSFRNATATAICTAAKMQEEQGHHQLA+TTLARGAQLLDTSIARFVTAYNQDAGRDLSMLHGADMTYDKMCDFSAQ  RG   A P    + G G
Sbjct:   35 KVINKPLEKKQVSSHSGANAANGALHVTIPAPLELHRSMIVILFILRRLRAVIFKNDPAHVLMGLPGNKSVQAHIDNYTDFINELGCLHLALNRYGIYSFRNATATAICTAAKMQEEQGHHQLASTTLARGAQLLDTSIARFVTAYNQDAGRDLSMLHGADMTYDKMCDFSAQVTRGTRVAQPAAASAPGGG 226          
BLAST of jgi.p|Trimin1|350606 vs. uniprot
Match: A0A836CI82_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI82_9STRA)

HSP 1 Score: 288 bits (737), Expect = 2.010e-97
Identity = 148/155 (95.48%), Postives = 151/155 (97.42%), Query Frame = 0
Query:   45 MIVILFILRRLRAVIFKNDPAHVLMSLPGNKSVQVHIDNYTDFINELGCLHLALNRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSMLHGADMTYDKMCDFSAQAKRGRITAAPQQQGSGGTGR 199
            MIVILFILRRLRAVIFKNDP HVLM LPGNKSVQVHIDNYTDFINELG LHLAL+RYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGR+LSML GADMTYDKMC+FSAQAKRGRITAAPQQQGSGGTGR
Sbjct:    1 MIVILFILRRLRAVIFKNDPTHVLMGLPGNKSVQVHIDNYTDFINELGRLHLALDRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRNLSMLPGADMTYDKMCNFSAQAKRGRITAAPQQQGSGGTGR 155          
BLAST of jgi.p|Trimin1|350606 vs. uniprot
Match: A0A835YKA5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKA5_9STRA)

HSP 1 Score: 257 bits (657), Expect = 3.660e-82
Identity = 160/274 (58.39%), Postives = 168/274 (61.31%), Query Frame = 0
Query:    2 VPRVWRVINKPLEKKQVSSHSGANAA-NGALHVTIPAPLELHRSMIVILFILRRLRAVIFKNDPAHVLMSLPGNKSVQVHIDNYTDFINELGCLHLALNRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQ-------------LLDTSIAR---FVTAYNQD------------AGRDLSMLHGADMTYDKMCD-----------------------------------------------FSAQAKRGRITAAPQQQGSGGTGR 199
            VPRVWRVIN PLEKKQVSSHSGANAA NGALHVTIPAPLELHR MIVILFILRRLRAVIFKNDPAHVLM LPGNKSVQVHIDNYTDFINEL  L LALNRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQ             +     AR    VTA  Q               +    +  A   +++M +                                                + QAKRGRITAA QQQGSGGTGR
Sbjct:  101 VPRVWRVINNPLEKKQVSSHSGANAAINGALHVTIPAPLELHRPMIVILFILRRLRAVIFKNDPAHVLMGLPGNKSVQVHIDNYTDFINELRRLQLALNRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQQQLWHMQQQYFDQMQRADAARTEALVTALQQQYVVQMQQWQAWQQAQQQRQIQNAQYMFERMQNTEHVRMQAMMTFQDNLVNRLLGPPAMHRQVSIEGGVNVGSRRTAPPILAPQAKRGRITAATQQQGSGGTGR 374          
BLAST of jgi.p|Trimin1|350606 vs. uniprot
Match: A0A835YJE7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJE7_9STRA)

HSP 1 Score: 238 bits (608), Expect = 2.340e-69
Identity = 129/193 (66.84%), Postives = 150/193 (77.72%), Query Frame = 0
Query:    7 RVINKPLEKKQVSSHSGANAAN-GALHVTIPAPLELHRSMIVILFILRRLRAVIFKNDPAHVLMSLPGNKSVQVHIDNYTDFINELGCLHLALNRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSMLHGADMTYDKMCDFSAQAKRGRITAAPQQQGSGGTG 198
            +VINKPLEKKQVS HSGANAAN GALHVTI AP ELH ++IVILFILRRLRA++F  +PA VL+ LPGN S QV+   YTDFINE+G LHLA++RYG++S RNATATAICT A++QE QG HQLAATT ARGA++LDTS+ARF TAY+Q A RDLSML  ADMTY  M +FS    +G        QG  G G
Sbjct:  830 QVINKPLEKKQVSCHSGANAANNGALHVTICAPKELHEAIIVILFILRRLRAIMFNEEPADVLIGLPGNGSAQVNSRCYTDFINEIGRLHLAIDRYGVFSMRNATATAICTTARIQEAQGQHQLAATTRARGARMLDTSLARFETAYDQSASRDLSMLPSADMTYIVMQEFSMSIAQGTRAPTAVTQGVVGHG 1022          
BLAST of jgi.p|Trimin1|350606 vs. uniprot
Match: A0A835Z4W1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W1_9STRA)

HSP 1 Score: 140 bits (354), Expect = 4.310e-35
Identity = 84/191 (43.98%), Postives = 115/191 (60.21%), Query Frame = 0
Query:    3 PRVW---RVINKPLEKKQVSSHSGANA-ANGALHVTIPAPLELHRSMIVILFILRRLRAVIFKNDPAHVLMSLPGNKSVQVHIDNYTDFINELGCLHLALNRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSMLHGADMTYDKMCDFSAQAKRGRITAAP 189
            P+ W   +VI++PL+KKQ SSH+G NA ANG L VTIP P ELH  + ++LF+ RRLRA+IF  +   +L  L G    QV    + D +N+LG +HL ++R+G YS RNA+ TA    A   E+ G HQLAAT + R  Q +D+S    +T YNQ AGRD  ++  A  T  +M  F+ +   G   A P
Sbjct:  932 PKGWVIEQVIDEPLDKKQASSHTGKNAVANGNLQVTIPCPPELHDVVCMVLFVCRRLRALIFGKEAPDLLNGLSG-LGHQVDEGTFGDLMNDLGRIHLRISRWGHYSLRNASVTAAFALAGALEDIGQHQLAATVVTRYCQAVDSSTVAGMTNYNQQAGRDTQLMAPATNTPAEMAAFAQRLATGSAAARP 1121          
BLAST of jgi.p|Trimin1|350606 vs. uniprot
Match: A0A835Z092_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z092_9STRA)

HSP 1 Score: 123 bits (309), Expect = 4.630e-29
Identity = 74/168 (44.05%), Postives = 103/168 (61.31%), Query Frame = 0
Query:    5 VWRVINKPLEKKQVSSHSG-ANAANGALHVTIPAPLELHRSMIVILFILRRLRAVIFKNDPAHVLMSLPGNKSVQVHIDNYTD--FINELGCLHLALNRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSMLHGADMT 169
            + +VI  PLE+KQ SSH+G ++  NG L V I AP ELH  + +ILF+ RRLRA+IF+ +P  +L  L G    Q     Y +  FI+ +G +HLA+  +G YS RNA+ TA+   A+  E  G H L  T L R AQ   +S ARFV++Y+Q AG++   +  ADMT
Sbjct:  908 IRQVIENPLEQKQASSHAGKSSVGNGPLPVDIVAPPELHEVICLILFVCRRLRAIIFEMEPPDLLTGLSGASGDQADCTTYANLKFISRIGRIHLAIPFFGHYSMRNASITAVMDMARDMEVGGLHGLKETLLNRAAQTWHSSRARFVSSYDQHAGQNTRHMPRADMT 1075          
BLAST of jgi.p|Trimin1|350606 vs. uniprot
Match: A0A835YRL5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRL5_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 9.190e-19
Identity = 62/182 (34.07%), Postives = 92/182 (50.55%), Query Frame = 0
Query:    9 INKPLEKKQVSSHSGANAANGALHVTIPAPLELHRSMIVILFILRRLRAVIFKNDPAHVLMSLPGNKSVQVHIDNYTDFINELGCLHLALNRYGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVTAYNQDAGRDLSMLHGADMTYDKMCDFSAQAKRGRITAAPQ 190
            +++P+ KK  +SH       G L + IP P  L   ++V+LFILRRLRAV+ K +P   ++ L G    QV    +TD + E+G  HL +   G+Y FR+ T T I   ++    Q  H+ A T    GA+ L TS+A    AY+ +A   ++M H          DF A      I+ +PQ
Sbjct:  829 MDRPMAKK--TSHIRGRGEAGPLQIAIPVPKALADVLVVMLFILRRLRAVLHKAEPDDRVLGLSGANGKQVGKKTFTDAVAEIGAYHLGVPSLGVYVFRHETITTIMDLSRYLRSQNEHKAADTVEQDGARQLGTSVAAMRLAYDNNADA-VTMAH----------DFRAMKDAAVISPSPQ 997          
BLAST of jgi.p|Trimin1|350606 vs. uniprot
Match: A0A835Z433_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z433_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 4.360e-9
Identity = 36/75 (48.00%), Postives = 50/75 (66.67%), Query Frame = 0
Query:    5 VWRVINKPLEKKQVSSHSG-ANAANGALHVTIPAPLELHRSMIVILFILRRLRAVIFKNDPAHVLMSLPGNKSVQ 78
            + +VI  PLE+KQ SSH+G ++  NG L V I AP ELH  + +ILF+ RRLRA+IF+ +P  +L  L  N  +Q
Sbjct:  853 IRQVIENPLEQKQASSHAGKSSVGNGPLPVDIVAPPELHEVICLILFVCRRLRAIIFEMEPPDLLTGLSLNHQLQ 927          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350606 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A836CA09_9STRA1.130e-138100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YWP9_9STRA1.370e-12695.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YLW9_9STRA1.190e-11691.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CI82_9STRA2.010e-9795.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YKA5_9STRA3.660e-8258.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YJE7_9STRA2.340e-6966.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z4W1_9STRA4.310e-3543.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z092_9STRA4.630e-2944.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YRL5_9STRA9.190e-1934.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z433_9STRA4.360e-948.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_67contigContig_67:522509..524664 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350606mRNA_10393Tribonema minus UTEX_B_3156 mRNAContig_67 522509..524778 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350606|estExt_Genemark1.C_Ctg_670057 ID=Trimin1|350606|estExt_Genemark1.C_Ctg_670057|Name=jgi.p|Trimin1|350606|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=200bp
MVPRVWRVINKPLEKKQVSSHSGANAANGALHVTIPAPLELHRSMIVILF
ILRRLRAVIFKNDPAHVLMSLPGNKSVQVHIDNYTDFINELGCLHLALNR
YGIYSFRNATATAICTAAKMQEEQGHHQLAATTLARGAQLLDTSIARFVT
AYNQDAGRDLSMLHGADMTYDKMCDFSAQAKRGRITAAPQQQGSGGTGR*
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