Trimin1|169329|e_gw1.63.26.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|169329
Unique NameTrimin1|169329|e_gw1.63.26.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length172
Homology
[Close]
BLAST of jgi.p|Trimin1|169329 vs. uniprot
Match: A0A836CAN8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAN8_9STRA)

HSP 1 Score: 375 bits (963), Expect = 3.950e-132
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0 
Query:    1 MDWTSGPDRYCVSVGDEPSWGWTRVFTMHAFAVSKYHLLERLDPPSYRIVKGTHIKPERDWRCCFAFFAFDGPVPGSTQLFVQMRGEPHIRSRVALTHSERWEDHLSMYVFCMPMPNTAQFNVHYTVRSAESLDAFPEQDRIHLGEPRDRWELKLTFYAYPSPVVLLEEPP 171
            MDWTSGPDRYCVSVGDEPSWGWTRVFTMHAFAVSKYHLLERLDPPSYRIVKGTHIKPERDWRCCFAFFAFDGPVPGSTQLFVQMRGEPHIRSRVALTHSERWEDHLSMYVFCMPMPNTAQFNVHYTVRSAESLDAFPEQDRIHLGEPRDRWELKLTFYAYPSPVVLLEEPP
Sbjct:    1 MDWTSGPDRYCVSVGDEPSWGWTRVFTMHAFAVSKYHLLERLDPPSYRIVKGTHIKPERDWRCCFAFFAFDGPVPGSTQLFVQMRGEPHIRSRVALTHSERWEDHLSMYVFCMPMPNTAQFNVHYTVRSAESLDAFPEQDRIHLGEPRDRWELKLTFYAYPSPVVLLEEPP 171
[Close]
BLAST of jgi.p|Trimin1|169329 vs. uniprot
Match: D8LKG0_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG0_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 4.920e-53
Identity = 81/168 (48.21%), Postives = 113/168 (67.26%), Query Frame = 0 
Query:    1 MDWTSGPDRYCVSVGDEPSWGWTRVFTMHAFAVSKYHLLERLDPP-SYRIVKGTHIKPERDWRCCFAFFAFDGPVPGSTQLFVQMRGEPHIRSRVALTHSERWEDHLSMYVFCMPMPNTAQFNVHYTVRSAESLDAFPEQDRIHLGEPRDRWELKLTFYAYPSPVVLL 167
            +DWTSGPDRY ++   EP WGWTR+FT  A+A SKYH+LE    P + +IVKG  + PE  W+C  AFFAF+  VPGS + +++ + EPH+R+R+ +  S RW+   S   F +P+P +   +VHYT+RS +SL+ +PEQ RI L +P   WE K  FYA+P+  VLL
Sbjct:  265 VDWTSGPDRYQITQDSEPEWGWTRLFTFFAYAASKYHVLETTQAPLAQKIVKGNFLTPEPGWKCVLAFFAFNDMVPGSNRYYIEEKDEPHLRTRIGMEASCRWDARHSFAAFDVPVPGSCALDVHYTIRSTDSLNPYPEQCRISLKDPWGSWEQKFRFYAFPAEQVLL 432
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|169329 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836CAN8_9STRA3.950e-132100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LKG0_ECTSI4.920e-5348.21WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_63contigContig_63:673345..675023 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169329mRNA_10327Tribonema minus UTEX_B_3156 mRNAContig_63 673345..675023 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|169329|e_gw1.63.26.1 ID=Trimin1|169329|e_gw1.63.26.1|Name=jgi.p|Trimin1|169329|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=172bp
MDWTSGPDRYCVSVGDEPSWGWTRVFTMHAFAVSKYHLLERLDPPSYRIV
KGTHIKPERDWRCCFAFFAFDGPVPGSTQLFVQMRGEPHIRSRVALTHSE
RWEDHLSMYVFCMPMPNTAQFNVHYTVRSAESLDAFPEQDRIHLGEPRDR
WELKLTFYAYPSPVVLLEEPP*
back to top