mRNA_6467 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|350396 vs. uniprot
Match: A0A835YMD2_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMD2_9STRA) HSP 1 Score: 1164 bits (3010), Expect = 0.000e+0 Identity = 685/685 (100.00%), Postives = 685/685 (100.00%), Query Frame = 1
Query: 1 MEDRHVVADDGNFAAVFDGHGGWQTAEFARRHLAALVRRELAAALAVTHDETAAALARAFLRLEREWLHAIRGAHELGFGAVASTGACAIAALVRGDDLFVANAGDCRAVLGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARFANLKAVPLSTDHNAREAAEQERLRREHPGEADIVGCRGARECWVKLRLEPRAALQPTRSLGDAYLKYGEFNGTRGQPASRGRFLDPPCTYPYILTEPQVRHHAIDRASDAFVILASDGLWDYLSNEEAVAIVADRAALARDAGSGSXXXXXXXXXXXXXXXXXXXDPVTGALIEAVLERAAAAHGIEGGAAAVRAMPRDKKRRNVHDDITVVVVFLVPAAGNYQIELVNLGKPNAKYDKYMARAKQRWEQVIIGDVPDVNGITVDQALGGAFRLPPNVGNQLVDVDDIVILYEFAQIDGGGTPAAGNTLGSTTVTQFRSAAQGGAPLSAYMVFDSHDVDTFIREGTFAAVALHEMGHALGFGSFNQFASKCGTSCKVYDKGVPGGCAASDKFTELGLAGQLLVQYIGKEGDGSYCSHWFEGQLGDELMTPYASQFLNPLTAITIGAFEDMSYQVSYDSADPIDKITPTTADIKASGTNRLLQQRREASRRIAEQGPSLRTEIDVPLRQP 2055
MEDRHVVADDGNFAAVFDGHGGWQTAEFARRHLAALVRRELAAALAVTHDETAAALARAFLRLEREWLHAIRGAHELGFGAVASTGACAIAALVRGDDLFVANAGDCRAVLGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARFANLKAVPLSTDHNAREAAEQERLRREHPGEADIVGCRGARECWVKLRLEPRAALQPTRSLGDAYLKYGEFNGTRGQPASRGRFLDPPCTYPYILTEPQVRHHAIDRASDAFVILASDGLWDYLSNEEAVAIVADRAALARDAGSGSXXXXXXXXXXXXXXXXXXXDPVTGALIEAVLERAAAAHGIEGGAAAVRAMPRDKKRRNVHDDITVVVVFLVPAAGNYQIELVNLGKPNAKYDKYMARAKQRWEQVIIGDVPDVNGITVDQALGGAFRLPPNVGNQLVDVDDIVILYEFAQIDGGGTPAAGNTLGSTTVTQFRSAAQGGAPLSAYMVFDSHDVDTFIREGTFAAVALHEMGHALGFGSFNQFASKCGTSCKVYDKGVPGGCAASDKFTELGLAGQLLVQYIGKEGDGSYCSHWFEGQLGDELMTPYASQFLNPLTAITIGAFEDMSYQVSYDSADPIDKITPTTADIKASGTNRLLQQRREASRRIAEQGPSLRTEIDVPLRQP
Sbjct: 1 MEDRHVVADDGNFAAVFDGHGGWQTAEFARRHLAALVRRELAAALAVTHDETAAALARAFLRLEREWLHAIRGAHELGFGAVASTGACAIAALVRGDDLFVANAGDCRAVLGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARFANLKAVPLSTDHNAREAAEQERLRREHPGEADIVGCRGARECWVKLRLEPRAALQPTRSLGDAYLKYGEFNGTRGQPASRGRFLDPPCTYPYILTEPQVRHHAIDRASDAFVILASDGLWDYLSNEEAVAIVADRAALARDAGSGSXXXXXXXXXXXXXXXXXXXDPVTGALIEAVLERAAAAHGIEGGAAAVRAMPRDKKRRNVHDDITVVVVFLVPAAGNYQIELVNLGKPNAKYDKYMARAKQRWEQVIIGDVPDVNGITVDQALGGAFRLPPNVGNQLVDVDDIVILYEFAQIDGGGTPAAGNTLGSTTVTQFRSAAQGGAPLSAYMVFDSHDVDTFIREGTFAAVALHEMGHALGFGSFNQFASKCGTSCKVYDKGVPGGCAASDKFTELGLAGQLLVQYIGKEGDGSYCSHWFEGQLGDELMTPYASQFLNPLTAITIGAFEDMSYQVSYDSADPIDKITPTTADIKASGTNRLLQQRREASRRIAEQGPSLRTEIDVPLRQP 685
BLAST of jgi.p|Trimin1|350396 vs. uniprot
Match: A0A835YJE2_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJE2_9STRA) HSP 1 Score: 298 bits (764), Expect = 3.240e-90 Identity = 185/395 (46.84%), Postives = 229/395 (57.97%), Query Frame = 1
Query: 1 MEDRHVVADDGN---FAAVFDGHGGWQTAEFARRHLAALVRRELAAALAVTHDETAAALARAFLRLEREWLHAIRGAHELGFGAVASTGACAIAALVRGDDLFVANAGDCRAVLGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARFANLKAVPLSTDHNAREAAEQERLRREHPGEADIVGCRGARECWVKLRLEPRAALQPTRSLGDAYLKYGEFNGTRGQPASRGRFLDPPCTYPYILTEPQVRHHAIDRASDAFVILASDGLWDYLSNEEAVAIVADRAALARDAGSGSXXXXXXXXXXXXXXXXXXXDPVTGALIEAVLERAAAAHGIEGGAAAVRAMPRDKKRRNVHDDITVVVVFL 1176
+EDRH+V + AAVFDGHGGWQ A+FA++ LA++V+ EL+ +LA T D+ + AL+RAFLR+ERE+L+ ++ A ELGFG VA +GACA+ A++RGD+LFVANAGDCRAVLG A ++AV LS DHNARE AEQ +LR HP E DI+ C+ A C+VK RL QPTRSLGDAYLKY EFN G S GR L PP T PYI +P+V+HHAIDRA D FV+LASDGLWDYLSNEEAVAIV A A DAG+ + ALI VLERAA H +EGGA ++R +P + RR HDD+T VV++L
Sbjct: 65 IEDRHMVKETAKGDLLAAVFDGHGGWQAADFAQKRLASVVQLELSNSLAQTPDQISGALSRAFLRVEREFLYQVQSAFELGFGDVARSGACALFAMIRGDNLFVANAGDCRAVLGRRAEDGT---------------------------------------------------------ARMEAVALSNDHNAREPAEQAKLRALHPTEEDIIRCKRATSCYVKGRL------QPTRSLGDAYLKYSEFNREAGAHRSAGRHLPPPYTPPYITADPEVQHHAIDRAVDEFVVLASDGLWDYLSNEEAVAIV---GAAALDAGNPRG--------------------ASDALIREVLERAARHHAVEGGAESLRKLPGGRARRGKHDDLTCVVIYL 373
BLAST of jgi.p|Trimin1|350396 vs. uniprot
Match: A0A836CNZ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNZ7_9STRA) HSP 1 Score: 259 bits (663), Expect = 7.490e-76 Identity = 140/271 (51.66%), Postives = 176/271 (64.94%), Query Frame = 1
Query: 1189 GNYQIELVNLGKPNAKYDKYMARAKQRWEQVIIGDVPDVNGITVDQALGGAFR-LPPNVGNQLVDVDDIVILYEFAQIDG-GGTPAAGNTLGSTTVTQFRSAAQGGAPLSAYMVFDSHDVDTFIREGTFAAVALHEMGHALGFGS--FNQFASKCGTSCKVYDKGVPGGCAASDKFTELGLAGQLLVQYIGKEGDGSYCSHWFEGQLGDELMTPYASQFLNPLTAITIGAFEDMSYQVSYDSADPIDKITPTTADIKASGTNRLLQQRREA 1989
G + I+LV +G +A YD YM RAK RWE +I+GDV D+ G+ + A F +P ++++VDDIVI Y+FA IDG G T NTLG+T V Q R A G P++A M+FD D+D I+EG F V +HEMGHALGF S + +AS+CGTSC V+D G P GC AS + +LGL G+L +Q G GDGSYC+HW E LGDELMTP NPLTAITI AFED Y+VSY +A+ I I+P A K S NR L+QRR A
Sbjct: 90 GKFAIQLVKVGDSDAAYDAYMERAKARWEAIIVGDVVDIVGMPSEFAFLDFFTDVPQTPLPRVMNVDDIVIGYQFATIDGLGNTATQLNTLGATAVIQTRPADIGSFPITAGMLFDVADIDLMIQEGLFDVVVMHEMGHALGFSSDMWPAYASQCGTSCAVFDAGAPNGCVASQTYKDLGLPGELTLQSSGTAGDGSYCAHWDEATLGDELMTPVIGTGANPLTAITIAAFEDCGYEVSYATAEDIALISPVAAGAKQSPVNRALRQRRRA 360
BLAST of jgi.p|Trimin1|350396 vs. uniprot
Match: A0A835YWX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWX7_9STRA) HSP 1 Score: 251 bits (642), Expect = 1.060e-73 Identity = 142/307 (46.25%), Postives = 179/307 (58.31%), Query Frame = 1
Query: 1249 MARAKQRWEQVIIGDVPDVNGITVDQA-LGGAFRL-----------------------------------------PPNVGNQLVDVDDIVILYEFAQIDGGGTPAAGNTLGSTTVTQFRSAAQGGAPLSAYMVFDSHDVDTFIREGTFAAVALHEMGHALGFGSFNQFASKCGTSCKVYDKGVPGGCAASDKFTELGLAGQLLVQYIGKEGDGSYCSHWFEGQLGDELMTPYASQFLNPLTAITIGAFEDMSYQVSYDSADPIDKITPTTADIKASGTNRLLQQRREASRRIAEQGPSLRTEIDVP 2043
M AK RWE +++GDV DV ++ + A AF L P N+ ++ VDDIVI YEFAQ+DG G + GNTLGST +T FR + G P+SA++ FD DVD FI GTF AV LHEMGHALGFG F+ + S+CGT+C VY+ P GC A+ K+ ELG A +LLV + G+ DGSYCSHW+EGQLGDELM+P+ S NPLTAI+I DM YQV YD+ADPID I+ TA +KAS TN L +R+ SR + +LR P
Sbjct: 1 MLAAKARWEAIVVGDVVDVATLSRESAPANDAFVLXXXXXXXXXXXXXXXXXXALWYAELLGVSSSSYDVYTSGGQPLNL-TDVIPVDDIVIAYEFAQMDGLGD-SDGNTLGSTLLTSFRDVSNSGLPISAFLKFDVADVDAFIAAGTFQAVVLHEMGHALGFGYFSNYPSRCGTTCVVYEASAPHGCVAAAKYRELGFADELLVHFDGEPSDGSYCSHWYEGQLGDELMSPFISDAHNPLTAISIAGMADMGYQVVYDTADPIDTISHLTAALKASPTNTRLARRQRHSRARQKAMAALRASAPAP 305
BLAST of jgi.p|Trimin1|350396 vs. uniprot
Match: A0A835YMK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMK8_9STRA) HSP 1 Score: 253 bits (646), Expect = 6.360e-73 Identity = 139/283 (49.12%), Postives = 178/283 (62.90%), Query Frame = 1
Query: 1195 YQIELVNLGKPNAKYDKYMARAKQRWEQVIIGDVPDVNGITVDQALGGAFRLPPNVGNQLVDVDDIVILYEFAQIDGGGTPAAGNTLGSTTVTQFRSAAQGGAPLSAYMVFDSHDVDTFIREGTFAAVALHEMGHALGFGSF--NQFASKCGTSCKVYDKGVPG-GCAASDKFTELGLAGQLLVQYIGKEGDGSYCSHWFEGQLGDELMTPYASQF-LNPLTAITIGAFEDMSY----------QVSYDSADPIDKITPTTADIKASGTNRLLQQRREASRRI 2001
+ I LVN+G+PN KYD++M AK RWE VI+GDVPD+ G GG + + + DVDDI+I Y+FA IDG G ++G+ LG+T +T++R A+QG P+SA M FD+ +VD I G F V LHEM HALGFG + +F S CGTSC Y GC AS K+ ELG LLV++ G GDGSYC HW EGQLGDELMTP + NPLT +TI +FED+ Y VSYD+ADP+D I+P + + NR L+QRREAS R+
Sbjct: 120 FNIVLVNVGEPNPKYDQFMEGAKLRWEAVIVGDVPDLPGFPTADLFGGYLQYEGDGVPDMTDVDDIIIAYQFAPIDGFGD-SSGDMLGTTMITKYRDASQGSFPISAQMTFDTANVDADIDAGAFDVVVLHEMAHALGFGDWATGKFTSPCGTSCLDYASNAGADGCIASTKYAELGYMDPLLVEFGGAPGDGSYCCHWDEGQLGDELMTPGINYSGYNPLTMLTIASFEDLGYVVSSQSLCGAAVSYDAADPMDAISPLGVGWRHTRANRHLRQRREASARL 401
BLAST of jgi.p|Trimin1|350396 vs. uniprot
Match: A0A836CL50_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL50_9STRA) HSP 1 Score: 249 bits (635), Expect = 9.400e-73 Identity = 132/271 (48.71%), Postives = 174/271 (64.21%), Query Frame = 1
Query: 1192 NYQIELVNLGKPNAKYDKYMARAKQRWEQVIIGDVPDVNGITVDQALGGAFR--LPPNVGNQLVDVDDIVILYEFAQIDGGGTPAAGNTLGSTTVTQFRSAAQGGAPLSAYMVFDSHDVDTFIREGTFAAVALHEMGHALGFGS--FNQFASKCGTSCKVYDKGVPGGCAASDKFTELGLAGQLLVQYIGKEGDGSYCSHWFEGQLGDELMTPYASQF-LNPLTAITIGAFEDMSYQVSYDSADPIDKITPTTADIKASGTNRLLQQRREA 1989
++ I+LV G + YDK+M A+ RW+ VI+GDV D+ G++ DQ F+ P +VD+DDIVI Y+FA++DG G LG T + Q R+ G P+SA M FD DV ++G+F V LHEMGHALGF + + F SKCG +CKV+D G P GC ASDK+ LGL GQL + + GK DGSYC+HW E LGDELMTPY + NPLTAITI AFEDM Y V+YD+AD + I+P A+ + +R+LQ+RR+A
Sbjct: 23 HFSIQLVKFGDSDPAYDKFMEAARDRWQNVIVGDVYDIRGVSSDQLFLDVFKGIKPTPEIPGVVDIDDIVIGYQFAKMDGRG-----EVLGGTFIIQSRTDDIGAFPVSAAMTFDIADVKAMAKDGSFETVVLHEMGHALGFSADMWASFESKCGKTCKVFDAGTPHGCKASDKYKALGLPGQLALDHSGKPKDGSYCAHWDEATLGDELMTPYMNTGGANPLTAITIAAFEDMGYTVNYDAADSAELISPAPANWREHTVSRMLQRRRQA 288
BLAST of jgi.p|Trimin1|350396 vs. uniprot
Match: D7FJS4_ECTSI (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJS4_ECTSI) HSP 1 Score: 247 bits (630), Expect = 6.760e-70 Identity = 163/395 (41.27%), Postives = 207/395 (52.41%), Query Frame = 1
Query: 1 MEDRHVVADDGN---FAAVFDGHGGWQTAEFARRHLAALVRRELAAALAVTHDETAAALARAFLRLEREWLHAIRGAHELGFGAVASTGACAIAALVRGDDLFVANAGDCRAVLGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARFANLKAVPLSTDHNAREAAEQERLRREHPGEADIVGCRGARECWVKLRLEPRAALQPTRSLGDAYLKYGEFNGTRGQPASRGRFLDPPCTYPYILTEPQVRHHAIDRASDAFVILASDGLWDYLSNEEAVAIVADRAALARDAGSGSXXXXXXXXXXXXXXXXXXXDPVTGALIEAVLERAAAAHGIEGGAAAVRAMPRDKKRRNVHDDITVVVVFL 1176
+EDRH + F +V DGHGGWQ AE AR+ L + EL +LA D+ +A+ +AFLR+ERE+L+ ++ A ELGFGAVA TGACAI ALVR + LFVANAGDCRAVLG + +A+ LS DHNA+E AEQ +L++ HP E D+ C+ C+VK RL QPTRS GDAYLKY EFNG G S GRFL PP T PYI EP++ H ID+++D FVILASDGLWD+++N EAV IV R A D + + L++ VLERAA HGI ++ +P +RR++HDDIT VV FL
Sbjct: 120 IEDRHDIRQSPRGDFFVSVLDGHGGWQAAELARKRLNIAAQTELKTSLAGNPDQVKSAITQAFLRVEREYLYQVKAAFELGFGAVARTGACAIMALVRDNRLFVANAGDCRAVLGRRKPTRLVGGWSTGPG------------------------------------------------GDPEALALSNDHNAKEQAEQAKLKKLHPFEGDVFTCKRPASCYVKGRL------QPTRSFGDAYLKYPEFNGKEGTHRSAGRFLPPPYTPPYITAEPEISVHEIDQSNDDFVILASDGLWDHVTNLEAVEIV--RKAAYSDK---------------------HPECASDCLVQRVLERAAENHGIS--VEELQEVPEGNRRRSMHDDITCVVFFL 435
BLAST of jgi.p|Trimin1|350396 vs. uniprot
Match: A0A835ZDU9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDU9_9STRA) HSP 1 Score: 236 bits (602), Expect = 2.640e-67 Identity = 133/275 (48.36%), Postives = 165/275 (60.00%), Query Frame = 1
Query: 1189 GNYQIELVNLGKPNAKYDKYMARAKQRWEQVIIGDVPDVNGITVDQAL--GGAFRLPPNVGNQLVDVDDIVILYEFAQIDGGGTPAAGNTLGSTTVTQFRSAAQGGAPLSAYMVFDSHDVDTFIREGTFAAVALHEMGHALGFGS--FNQFASKCGTSCKVYDKGVPGGCAASDKFTELGLAGQLLVQYIGKEGDGSYCSHWFEGQLGDELMTPYASQFLNPLTAITIGAFEDMSYQVSYDSADPIDKITPTTADIKASGT---NRLLQQRREAS 1992
G Y IELV +G +AKYD + A+AKQRWEQ+I GD +V I D+A G + + VDDI I Y + IDG G LG T++ +FR+ G P+SA M FD+ DVD I +G F + LHEMGHALGF + + +ASKCG SC +D+G PGGCAAS + LGL GQL + G GDG YC HW E QLGDELMTP + PLTAI+I AFEDM Y VSY++A PI+ IT A+ S T R L RR+ S
Sbjct: 75 GKYNIELVKIGDSDAKYDAFFAKAKQRWEQIITGD--NVMDIPADKAPEDGWFSNFFEELEPYIAAVDDITIAYRISPIDGYGL-----VLGETSIIRFRTEQYGSFPISAAMTFDTEDVDGMIDDGVFESTILHEMGHALGFSANMWALYASKCGASCAAFDEGAPGGCAASRTYARLGLPGQLRMHAAGGSGDGQYCGHWDELQLGDELMTPVVGSGMQPLTAISISAFEDMGYLVSYETAAPIELITTVPAEWSQSATLPFTRSLLSRRKRS 342
BLAST of jgi.p|Trimin1|350396 vs. uniprot
Match: A0A7S2V900_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V900_9STRA) HSP 1 Score: 224 bits (570), Expect = 8.940e-62 Identity = 165/411 (40.15%), Postives = 203/411 (49.39%), Query Frame = 1
Query: 1 MEDRHVVAD--DGN-FAAVFDGHGGWQTAEFARRHLAALVRRELAAALAVTH-------DETAAALARAFLRLEREWLHAIRGAHELGFGAVASTGACAIAALVRGDDLFVANAGDCRAVLGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARFANLKAVP--LSTDHNAREAAEQERLRREHPGEADIVGCRGARECWVKLRLEPRAALQPTRSLGDAYLKYGEFNGTRGQPA------SRGRFLDPPCTYPYILTEPQVRHHAIDRASDAFVILASDGLWDYLSNEEAVAIVADRAALA-RDAGSGSXXXXXXXXXXXXXXXXXXXDPVTGALIEAVLERAAAAHGIEGGAAAVRAMPRDKKRRNVHDDITVVVVFL 1176
+EDRH VA G+ FA+VFDGHGGWQ AE+A+RHL + ELA TH + AL+RAF R+ER ++ I + GFGAVA G CA+ ALVRG+ +F+ANAGDCRAVLG R + VP LS+DHN RE EQ +LR+ HP E ++ C+ C+VK LQPTRS+GDAYLKY EFNG GQPA SRGR + PP T PYI P+V H A D F+ILASDGLWDYL N+EAVAIVA A D G L+ AVL+ AA A G+ +R +P ++RR +HDDITVVV+ L
Sbjct: 101 IEDRHFVAKMTGGHIFASVFDGHGGWQAAEYAQRHLEEYLEAELAHC--ATHPGQPLCDSQVQGALSRAFERVERGFITLIHQSFNAGFGAVARVGTCALVALVRGERIFIANAGDCRAVLGRRQHKN-------------------------------------------------------GRIPGITHVPVALSSDHNCREPKEQLKLRKWHPAEDNVFVCKRPDSCYVK------GCLQPTRSIGDAYLKYPEFNGPPGQPAGVERHKSRGRHIPPPYTPPYITARPEVTCHMRRTAEDDFLILASDGLWDYLDNQEAVAIVAQGIAEGDEDLGQ--------------------------RLVSAVLQEAAKAQGMTVDQ--LRKVPVGRQRRRLHDDITVVVIRL 420
BLAST of jgi.p|Trimin1|350396 vs. uniprot
Match: A0A835Z0U7_9STRA (Rhomboid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0U7_9STRA) HSP 1 Score: 207 bits (528), Expect = 2.100e-53 Identity = 132/308 (42.86%), Postives = 163/308 (52.92%), Query Frame = 1
Query: 1186 AGNYQIELVNLGKPNAKYDKYMARAKQRWEQVIIGDVPDVNGITVDQALGGAF--RLPPNVGNQLVDVDDIVILYEFAQIDGGGTPAAGNTLGSTTVTQFRSAAQGGAPLSAYMVFDSHDVDTFIREGT-------------FAAVALHE------------------MGHALGFGS--FNQFASKCGTSCKVYDKGVPGGCAASDKFTELGLAGQLLVQYIGKEGDGSYCSHWFEGQLGDELMTP--YASQFLNPLTAITIGAFEDMSYQVSYDSADPIDKITPTTADIKASGTNRLLQQRREASRR 1998
AG++ I+L+ G +AKYD +M RA RW QVI+GDV D+ G + F P +DVDDI+I Y+ A IDG P N +GST R G P SA M FDS D D I +GT AV LHE MGHALGF + + S+CGTSC + G P GC AS KFTELG G L + + G DGS+CSHW E LG+ELMTP ++ +PLT ITI A+ED+ YQVSY SADPI ++ P A K + NR+L RR AS R
Sbjct: 418 AGDFNIQLLKFGDGDAKYDVFMERAAARWMQVIVGDVQDMPGNSAADLFQDFFGANAPAQPLPDSIDVDDIIIGYQIAPIDG---PL--NVVGSTAALAVRPPEYGSFPYSAGMTFDSADADAAIADGTSDXXXXXXXXXXXXXAVILHEXXXXXXXXXXXXXXXXXXMGHALGFAESLWPLYPSQCGTSCTYFATGAPNGCLASQKFTELGFDGPLPMYFQGSPNDGSFCSHWDETVLGNELMTPGIAEAEVTSPLTEITIAAYEDIGYQVSYASADPISQVVPAQARWKDTPLNRMLAARRVASAR 720 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350396 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_6467 ID=mRNA_6467|Name=jgi.p|Trimin1|350396|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2365bp|location=Sequence derived from alignment at Contig_62:77338..87755- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGAAGACCGACACGTGGTGGCCGACGACGGAAACTTCGCGGCCGTCTTback to top protein sequence of jgi.p|Trimin1|350396 >Trimin1|350396|estExt_Genemark1.C_Ctg_620014 ID=Trimin1|350396|estExt_Genemark1.C_Ctg_620014|Name=jgi.p|Trimin1|350396|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=686bp MEDRHVVADDGNFAAVFDGHGGWQTAEFARRHLAALVRRELAAALAVTHDback to top mRNA from alignment at Contig_62:77338..87755- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_6467 ID=mRNA_6467|Name=jgi.p|Trimin1|350396|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=10418bp|location=Sequence derived from alignment at Contig_62:77338..87755- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_62:77338..87755- >mRNA_6467 ID=mRNA_6467|Name=jgi.p|Trimin1|350396|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2058bp|location=Sequence derived from alignment at Contig_62:77338..87755- (Tribonema minus UTEX_B_3156 )back to top |