Trimin1|350311|estExt_Genemark1.C_Ctg_600086 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350311
Unique NameTrimin1|350311|estExt_Genemark1.C_Ctg_600086
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length615
Homology
BLAST of jgi.p|Trimin1|350311 vs. uniprot
Match: A0A835YRS9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRS9_9STRA)

HSP 1 Score: 1277 bits (3304), Expect = 0.000e+0
Identity = 614/614 (100.00%), Postives = 614/614 (100.00%), Query Frame = 0
Query:    1 MRSLKKKYGWQMKPLFKDAWYDLPDGGRAVKQRLLHAIVHQRNFTMAFTGISNTAGHDNRITESYPMVLEQLFKPVLQLAGVNFHVLNGAMGNTDFLPYSYCVEAHAGAHPDVVSWEMGMEVGNRSCRQTAMAVEAWIRAVLSLPSRPVPLLLNCQADRGGCARGSNAPSAHRVFERVVGRCEGKEHSEYTEEHQLTQWYREYGLHGLNLEFLLAKHACGNPLFAKERLYGGKMGTPRTKSWHPGPPGHLLMAEVLMANYIGLLDVAYREELAKALGLQPYGASGPPRLPEASYCFQEHCTNAGAFTCLTSYYPNWEDHTQLTPHVVDSRFDPTPKFQVGLEKPDAAAAEWIKMTERACRWGANLPMGLPAFAATVNNGPFVRCLRERGEELQLDALNCWGQTAMIWGTGEEPFSPTTAASTSFAPQQEALFIMKIHSAAAASGFSTSTFRSCTNSKMLLVPQRGYLPSNTYRWEVIVNEPLRGIHGFLYDDPEWPIDRKWVIAGGASAGPLHLNFEVKELQNGETAPVLICRQLPQEQTQAEQLAQPVEAIDNMELRLDGQVVSAERPTPQYSHNFCWQLDTAVGNGVHTVTVRAKSAEATMLVRISHLIVPK 614
            MRSLKKKYGWQMKPLFKDAWYDLPDGGRAVKQRLLHAIVHQRNFTMAFTGISNTAGHDNRITESYPMVLEQLFKPVLQLAGVNFHVLNGAMGNTDFLPYSYCVEAHAGAHPDVVSWEMGMEVGNRSCRQTAMAVEAWIRAVLSLPSRPVPLLLNCQADRGGCARGSNAPSAHRVFERVVGRCEGKEHSEYTEEHQLTQWYREYGLHGLNLEFLLAKHACGNPLFAKERLYGGKMGTPRTKSWHPGPPGHLLMAEVLMANYIGLLDVAYREELAKALGLQPYGASGPPRLPEASYCFQEHCTNAGAFTCLTSYYPNWEDHTQLTPHVVDSRFDPTPKFQVGLEKPDAAAAEWIKMTERACRWGANLPMGLPAFAATVNNGPFVRCLRERGEELQLDALNCWGQTAMIWGTGEEPFSPTTAASTSFAPQQEALFIMKIHSAAAASGFSTSTFRSCTNSKMLLVPQRGYLPSNTYRWEVIVNEPLRGIHGFLYDDPEWPIDRKWVIAGGASAGPLHLNFEVKELQNGETAPVLICRQLPQEQTQAEQLAQPVEAIDNMELRLDGQVVSAERPTPQYSHNFCWQLDTAVGNGVHTVTVRAKSAEATMLVRISHLIVPK
Sbjct:    1 MRSLKKKYGWQMKPLFKDAWYDLPDGGRAVKQRLLHAIVHQRNFTMAFTGISNTAGHDNRITESYPMVLEQLFKPVLQLAGVNFHVLNGAMGNTDFLPYSYCVEAHAGAHPDVVSWEMGMEVGNRSCRQTAMAVEAWIRAVLSLPSRPVPLLLNCQADRGGCARGSNAPSAHRVFERVVGRCEGKEHSEYTEEHQLTQWYREYGLHGLNLEFLLAKHACGNPLFAKERLYGGKMGTPRTKSWHPGPPGHLLMAEVLMANYIGLLDVAYREELAKALGLQPYGASGPPRLPEASYCFQEHCTNAGAFTCLTSYYPNWEDHTQLTPHVVDSRFDPTPKFQVGLEKPDAAAAEWIKMTERACRWGANLPMGLPAFAATVNNGPFVRCLRERGEELQLDALNCWGQTAMIWGTGEEPFSPTTAASTSFAPQQEALFIMKIHSAAAASGFSTSTFRSCTNSKMLLVPQRGYLPSNTYRWEVIVNEPLRGIHGFLYDDPEWPIDRKWVIAGGASAGPLHLNFEVKELQNGETAPVLICRQLPQEQTQAEQLAQPVEAIDNMELRLDGQVVSAERPTPQYSHNFCWQLDTAVGNGVHTVTVRAKSAEATMLVRISHLIVPK 614          
BLAST of jgi.p|Trimin1|350311 vs. uniprot
Match: A0A835YN73_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN73_9STRA)

HSP 1 Score: 484 bits (1247), Expect = 1.220e-163
Identity = 270/567 (47.62%), Postives = 316/567 (55.73%), Query Frame = 0
Query:   15 LFKDAWYDLPDGGRAVKQRLLHAIVHQRNFTMAFTGISNTAGHDNRITESYPMVLEQLFKPVLQLAGVNFHVLNGAMGNTDFLPYSYCVEAHAGAHPDVVSWEMGMEVGNRSCRQTAMAVEAWIRAVLSLPSRPVPLLLNCQADRGGCARGSNAP-SAHRVFERVVGRCEGKEHSEYTEEHQLTQWYREYGLHGLNLEFLLAKHACGNPLFAKERLYGGKMGTPRTKSWHPGPPGHLLMAEVLMANYIGLLDVAYREELAKALG------------LQPYGASGPPRL--PEASYCFQEH---CTNAGAFTCLTSYYPNWEDHTQLTPHVVDSRFDPTPKFQVGLEKPDAAAAEWIKMTERACRWGANLPMGLPAFAATVNNGPFVRCLRERGEELQLDALNCWGQTAMIWGTGEEPFSPTTAASTSFAPQQEALFIMKIHSAAAASGFSTSTFRSCTNSKMLLVPQRGYLPSNTYRWEVIVNEPLRGIHGFLYDDPEWPIDRKWVIAGGASAGPLHLNFEVKELQNGETAPVLICRQLPQEQTQAEQLAQPVEAIDNMELRLDGQV 563
            LF +AWYDLPDGG AVKQRLL A+V QRNFTMAFTGISNTAGHDN   +SYPMVLE+L KPVLQLAGV   VLNGAMGNTDFLPYSYCVEAHAGAHPDVVSWEM M++GN  C +TA  VE WIR  L+LPSRPVPLLLNCQADRG CAR   AP +     E+ VGRC G E +  T +H L  WY++YG+H LNLE L+A H CG P F K+RLYGGK+GTPRTKSWHPGP  H LMAEVL ANY+GLL  A  E  A A G            L+       P+L    A  C +     C  +G++ CLT+YYPN +  TQL  +V D+                                             T+N  P  +                                                                                  YLP+NT  W+VIVNEP+RGI GF +D+P+WP+DRKWV+AG ASAGPL+  FEV EL  G  APV++CRQ+P +QT +E  AQP   +DNM L LDGQV
Sbjct:    1 LFHNAWYDLPDGGAAVKQRLLRAVVGQRNFTMAFTGISNTAGHDNLFAQSYPMVLERLLKPVLQLAGVELRVLNGAMGNTDFLPYSYCVEAHAGAHPDVVSWEMSMQIGNTPCTRTAELVETWIRTALALPSRPVPLLLNCQADRGRCARDREAPPTLSHTMEKAVGRCVGAERTRGTLQHDLMSWYKDYGIHSLNLETLMAAHTCGYPAFEKKRLYGGKVGTPRTKSWHPGPGAHRLMAEVLAANYLGLLRGALSELDAAAPGVTLQELQARERRLRQCAVHLVPQLWQSHAPCCHRRFVLLCARSGSYRCLTTYYPNQDASTQLDRYVTDN--------------------------------------------TTLNRKPHFK----------------------------------------------------------------------------------YLPTNTSEWQVIVNEPMRGITGFQFDNPQWPVDRKWVLAGAASAGPLNFKFEVTELPAGRMAPVVVCRQVPPQQTPSEIHAQPPYTLDNMVLSLDGQV 441          
BLAST of jgi.p|Trimin1|350311 vs. uniprot
Match: A0A836C824_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C824_9STRA)

HSP 1 Score: 266 bits (680), Expect = 7.250e-78
Identity = 145/358 (40.50%), Postives = 199/358 (55.59%), Query Frame = 0
Query:    3 SLKKKYGWQMKP-LFKDAWYDLPDGGRAVKQRLLHAIVHQRNFTMAFTGISNTAGHDNRITESYPMVLEQLFKPVLQLAGVNFHVLNGAMGNTDFLPYSYCVEAHAGAHPDVVSWEMGMEVGNRSCRQTAMAVEAWIRAVLSLPSRPVPLLLNCQADRGGCARGSNAPSAHRVFERVVGRCEGKEHSEYTEEHQLTQWYREYGLHGLNLEFLLAKHACGNPLFAKERLYGGKMGTPRTKSWHPGPPGHLLMAEVLMANYIGLLDVAYREELAKALGLQPYGASGPPRLPEASYCFQEHCTNAGAFTCLTSYYPNWEDHTQLTPHVVDSRFDPTPKFQVGLEKPDAAAAEW-IKMTERA 358
            S K KYG +    +F + W+DLPDGG+AV  R+L AIV+QR F ++FTGISNTAGHDN   ++YP   E +  PV   AGV+F   NGA+GN D LPYSYC+EAHAGAHPD+VSWEMGM++    C   +  +E WIR V++LPS+P+P++L   + R  C        ++  F ++ GRC G   ++         +Y+++G+H L+L+ LL+   CG+ LF +E LYG K                               D  Y   LA  L L    A   P +P  ++C  E C  AG++ CLTSYYPN ED  QL  H+  S F+ T + Q   + P+    EW I + ERA
Sbjct:   58 SSKDKYGEKYSDTVFANGWHDLPDGGQAVMDRMLGAIVYQRTFHVSFTGISNTAGHDNMKEQAYPWHFETILAPVFARAGVDFTASNGAIGNNDILPYSYCMEAHAGAHPDIVSWEMGMQIEGVECFPKSEYLEYWIRNVIALPSQPIPVVLEAVSKRRWCPGNRELSYSNYDFNQMFGRCWGDRPTDEQRRKDQMDYYKDFGIHALHLDDLLSHTTCGDDLFDEEHLYGNK-------------------------------DAEYVTSLAATLNLPAEPARRHP-VPMPNFCISEQCVKAGSYNCLTSYYPNLEDSLQLKAHITQSAFNATERTQYLPDVPE----EWQIVVNERA 379          
BLAST of jgi.p|Trimin1|350311 vs. uniprot
Match: X6N7W9_RETFI (Uncharacterized protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6N7W9_RETFI)

HSP 1 Score: 87.0 bits (214), Expect = 4.060e-14
Identity = 91/324 (28.09%), Postives = 139/324 (42.90%), Query Frame = 0
Query:   21 YDLPDGGRAVKQ-------RLLHAIVHQRNFTMAFTGISNTAGHDNRITESYPMVLEQLFKPVLQLAG-------VNFHVLNGAMGNTDFLPYSYCVEAHAGAHPDVVSWEMGMEVGNRSCRQTAMAVEAWIRAVLSLPSRPVPLLLNCQADRGGCARGSNAPSAHRVFERVVGRCEGKEHSEYTEEHQLTQWYREYGLHGLNLEFLLAKHACGNPLFAKERLYGGKMGTPRTKSWHPGPPGHLLMAEVLMANYI-GLLDVAYREELA--------KALGLQPYGASGPPR--LPEASYCFQEHCTNAGAFTCLTSYYPNWEDH 319
            Y + D G   ++       ++  +++   +FT+AF+G SNTAGHDN    SYPM L+ L +P+    G       V  H + G++G +     S C+    G   DVV WE   E+ N   R    A+E  IR  ++L  RPV       A   G   G   PS  R  +          +S Y E   L ++Y + G  G+ +EF  +     NPL +++  Y   +      +WHPGP GH   A+++   Y+  LL V    + A          L +       P    LP   YC +  CT+A    C++  +P+   H
Sbjct:  300 YSVTDWGNGFEESKLRLGVKMARSLLLGDSFTVAFSGSSNTAGHDNMFLSSYPMQLQSLLRPLWVRIGYKGAAFVVKNHAIGGSLGTSQI---SSCLPEIVGDDADVVFWE---EIMNDGGRPPPKAIENHIRNAITLKRRPV-----WHAILAGSYSGD--PSTFRKVQL---------NSAYKE---LAEYYTKVGA-GI-VEFFPSNGI--NPLVSQDNKYSPDL---LYVTWHPGPRGHRYYAQIIAHFYLTSLLSVLKTIQPAIQNMKTTVPTLEMHDLLQDIPADSILPSGKYCGKV-CTSAKRRWCISGMFPSDSSH 590          
BLAST of jgi.p|Trimin1|350311 vs. uniprot
Match: A0A7S2AWA9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AWA9_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.550e-10
Identity = 39/101 (38.61%), Postives = 53/101 (52.48%), Query Frame = 0
Query:   20 WYDLPDGGRAVKQRLLHAIVHQRNFTMAFTGISNTAGHDNRITESYPMVLEQLFKPVLQLAGVNFHVLNGAMGNTDFLPYSYCVEAHAGAHPDVVSWEMGM 120
            WY+       + +RLL A+V  R F +   G+S+TAGH N  +ESYPMV+ Q   PV   A +   V N AMG     P S C++   G   D+V W+  M
Sbjct:   99 WYNGDAKDERLVERLLRAMVLGRKFVVVVGGMSDTAGHGNLGSESYPMVMLQALGPVFAAANIQLEVRNMAMGGVPSFPTSVCMKEAFGEDVDLVVWDFRM 199          
BLAST of jgi.p|Trimin1|350311 vs. uniprot
Match: A0A836CNL1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNL1_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 4.200e-8
Identity = 38/72 (52.78%), Postives = 45/72 (62.50%), Query Frame = 0
Query:  338 QVGLEKPDAAAAEWIKMTERACRWGANLPMGLPAFAATVNNGPFVRCLRERGEELQLDALNCWGQTAMIWGT 409
            +V  EKPDAAAAE I MTERA  WG NL  GL AFAA ++N PFVR LRE G +    A++   +     GT
Sbjct:  602 KVDHEKPDAAAAEVIHMTERARDWGTNLRPGLLAFAARLDNEPFVRYLRECGVQWSESAVDTMAENGRPPGT 673          
BLAST of jgi.p|Trimin1|350311 vs. uniprot
Match: D8LSB3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSB3_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 7.300e-8
Identity = 35/94 (37.23%), Postives = 52/94 (55.32%), Query Frame = 0
Query:  200 YREYGLHGLNLEFLLAKHACGNPLFAKERLYGGKM-GTPRTKSWHPGPPGHLLMAEVLMANY--IGLLDVAYREELAKALGLQPYGASGPPRLP 290
            YRE+GLH +    L+ ++ CGN +F   RLY   +   PR  SWH GPPGH L+A++L  +Y  + L  V   E++A  +  +    SG   +P
Sbjct:    4 YREFGLHRMTPSSLVPENTCGNEVFDYHRLYNASLKDIPRPSSWHAGPPGHQLVADMLFMHYAEVFLKAVGRLEDVAPGVTARQLRDSGGEIIP 97          
BLAST of jgi.p|Trimin1|350311 vs. uniprot
Match: A0A835ZHI0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHI0_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 3.080e-7
Identity = 30/46 (65.22%), Postives = 33/46 (71.74%), Query Frame = 0
Query:  338 QVGLEKPDAAAAEWIKMTERACRWGANLPMGLPAFAATVNNGPFVR 383
            +V  EKPDAAAAEWIKMTERAC WGANL  G  A+A   +N  F R
Sbjct:    8 KVDYEKPDAAAAEWIKMTERACYWGANLRPGFLAYAVRFDNESFAR 53          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350311 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A835YRS9_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YN73_9STRA1.220e-16347.62Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836C824_9STRA7.250e-7840.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
X6N7W9_RETFI4.060e-1428.09Uncharacterized protein n=1 Tax=Reticulomyxa filos... [more]
A0A7S2AWA9_9STRA1.550e-1038.61Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A836CNL1_9STRA4.200e-852.78P-loop containing nucleoside triphosphate hydrolas... [more]
D8LSB3_ECTSI7.300e-837.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZHI0_9STRA3.080e-765.22P-loop containing nucleoside triphosphate hydrolas... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_60contigContig_60:609221..619798 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350311mRNA_6831Tribonema minus UTEX_B_3156 mRNAContig_60 609221..620028 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350311|estExt_Genemark1.C_Ctg_600086 ID=Trimin1|350311|estExt_Genemark1.C_Ctg_600086|Name=jgi.p|Trimin1|350311|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=615bp
MRSLKKKYGWQMKPLFKDAWYDLPDGGRAVKQRLLHAIVHQRNFTMAFTG
ISNTAGHDNRITESYPMVLEQLFKPVLQLAGVNFHVLNGAMGNTDFLPYS
YCVEAHAGAHPDVVSWEMGMEVGNRSCRQTAMAVEAWIRAVLSLPSRPVP
LLLNCQADRGGCARGSNAPSAHRVFERVVGRCEGKEHSEYTEEHQLTQWY
REYGLHGLNLEFLLAKHACGNPLFAKERLYGGKMGTPRTKSWHPGPPGHL
LMAEVLMANYIGLLDVAYREELAKALGLQPYGASGPPRLPEASYCFQEHC
TNAGAFTCLTSYYPNWEDHTQLTPHVVDSRFDPTPKFQVGLEKPDAAAAE
WIKMTERACRWGANLPMGLPAFAATVNNGPFVRCLRERGEELQLDALNCW
GQTAMIWGTGEEPFSPTTAASTSFAPQQEALFIMKIHSAAAASGFSTSTF
RSCTNSKMLLVPQRGYLPSNTYRWEVIVNEPLRGIHGFLYDDPEWPIDRK
WVIAGGASAGPLHLNFEVKELQNGETAPVLICRQLPQEQTQAEQLAQPVE
AIDNMELRLDGQVVSAERPTPQYSHNFCWQLDTAVGNGVHTVTVRAKSAE
ATMLVRISHLIVPK*
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