mRNA_6806 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|350293
Unique Name	mRNA_6806
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|350293 vs. uniprot
Match: A0A836C9U6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9U6_9STRA)

HSP 1 Score: 1324 bits (3426), Expect = 0.000e+0
Identity = 889/889 (100.00%), Postives = 889/889 (100.00%), Query Frame = 1

Query:    1 MQHEHLQQQLQLQXXXXXXXXXXXXXXXXXXXXXXXXXXWEAAPLPAHTYEGAMQXXXXXXXXAPPARTFSPMPLRRQLDSQDSIPALQLPAAQEPAQAWRPFAGAAPDASSALHAAAPQSGAAAGSGDAGADDALRARVAELEAQLAAQARQLAQTRSELLRAEEEKDDLLASAAVVEVESKLAVDQELKRLASELNFKEHALGEAQKEGARARRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPALGAADALRLAHVPFAEVLVAERGVELMQLLGADPTLPPAYERGAAXXXXXXXXXXRRAICTPGPTPLRPPLGSAAAVXXXXXXXXXXXXAEFAVTPLPRAHCTQSSSATGNTVSPAASAGAASXXXXXXXXRRGAFGALRRQLFECLRDAWAGRAGPGELLAVLVGFVEAAGGGSELSEQDVARYSHTLVSAVRLMQATLALSHQLRAALRPTSAPDDDAQAPCRPLCTISDATGGPLAGAQMDGHLAAMLSNDPHTVAAVGSSSERGLQRQRGLAARLRRCLMHAFVGGVGAQEGALVTAAMQAILTCTAELEPAELAATWSALLSDDAFHTILCTKFGTTAMKELALDLLRCLFRSRDLFLQIATGNDAHATPAAQVQDGAGGAAVAPGXXXXXXXXXXXXXXGQGGRPSLLRQLCAQLFTMESALPGDASLYGLYTRAVRLLSQVCACHGSVATSHLLEDNDGGPSSDAVLRVRLIPKLINFISYGGGVVQVQQQRSTTLHRTTAPVTSAGDGPPARLHEPGRRPLQQQRTRWPGTDGSGKGHAADRESSRGALPLSEQQCRVYKDGVKVLKADGSYLSSSAQHMCPYPFLQC 2667
            MQHEHLQQQLQLQXXXXXXXXXXXXXXXXXXXXXXXXXXWEAAPLPAHTYEGAMQXXXXXXXXAPPARTFSPMPLRRQLDSQDSIPALQLPAAQEPAQAWRPFAGAAPDASSALHAAAPQSGAAAGSGDAGADDALRARVAELEAQLAAQARQLAQTRSELLRAEEEKDDLLASAAVVEVESKLAVDQELKRLASELNFKEHALGEAQKEGARARRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPALGAADALRLAHVPFAEVLVAERGVELMQLLGADPTLPPAYERGAAXXXXXXXXXXRRAICTPGPTPLRPPLGSAAAVXXXXXXXXXXXXAEFAVTPLPRAHCTQSSSATGNTVSPAASAGAASXXXXXXXXRRGAFGALRRQLFECLRDAWAGRAGPGELLAVLVGFVEAAGGGSELSEQDVARYSHTLVSAVRLMQATLALSHQLRAALRPTSAPDDDAQAPCRPLCTISDATGGPLAGAQMDGHLAAMLSNDPHTVAAVGSSSERGLQRQRGLAARLRRCLMHAFVGGVGAQEGALVTAAMQAILTCTAELEPAELAATWSALLSDDAFHTILCTKFGTTAMKELALDLLRCLFRSRDLFLQIATGNDAHATPAAQVQDGAGGAAVAPGXXXXXXXXXXXXXXGQGGRPSLLRQLCAQLFTMESALPGDASLYGLYTRAVRLLSQVCACHGSVATSHLLEDNDGGPSSDAVLRVRLIPKLINFISYGGGVVQVQQQRSTTLHRTTAPVTSAGDGPPARLHEPGRRPLQQQRTRWPGTDGSGKGHAADRESSRGALPLSEQQCRVYKDGVKVLKADGSYLSSSAQHMCPYPFLQC
Sbjct:    1 MQHEHLQQQLQLQXXXXXXXXXXXXXXXXXXXXXXXXXXWEAAPLPAHTYEGAMQXXXXXXXXAPPARTFSPMPLRRQLDSQDSIPALQLPAAQEPAQAWRPFAGAAPDASSALHAAAPQSGAAAGSGDAGADDALRARVAELEAQLAAQARQLAQTRSELLRAEEEKDDLLASAAVVEVESKLAVDQELKRLASELNFKEHALGEAQKEGARARRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPALGAADALRLAHVPFAEVLVAERGVELMQLLGADPTLPPAYERGAAXXXXXXXXXXRRAICTPGPTPLRPPLGSAAAVXXXXXXXXXXXXAEFAVTPLPRAHCTQSSSATGNTVSPAASAGAASXXXXXXXXRRGAFGALRRQLFECLRDAWAGRAGPGELLAVLVGFVEAAGGGSELSEQDVARYSHTLVSAVRLMQATLALSHQLRAALRPTSAPDDDAQAPCRPLCTISDATGGPLAGAQMDGHLAAMLSNDPHTVAAVGSSSERGLQRQRGLAARLRRCLMHAFVGGVGAQEGALVTAAMQAILTCTAELEPAELAATWSALLSDDAFHTILCTKFGTTAMKELALDLLRCLFRSRDLFLQIATGNDAHATPAAQVQDGAGGAAVAPGXXXXXXXXXXXXXXGQGGRPSLLRQLCAQLFTMESALPGDASLYGLYTRAVRLLSQVCACHGSVATSHLLEDNDGGPSSDAVLRVRLIPKLINFISYGGGVVQVQQQRSTTLHRTTAPVTSAGDGPPARLHEPGRRPLQQQRTRWPGTDGSGKGHAADRESSRGALPLSEQQCRVYKDGVKVLKADGSYLSSSAQHMCPYPFLQC 889

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350293 vs. uniprot

BLAST of jgi.p|Trimin1|350293 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836C9U6_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_60	contig	Contig_60:430959..440862 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|350293\|estExt_Genemark1.C_Ctg_600064
Hectar predicted targeting category	other localisation
TranscriptId	350615
Track	FilteredModels1
ProteinId	350293

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350293	gene_6806	Tribonema minus UTEX_B_3156	gene	Contig_60 430959..440862 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_6806_1	exon_6806_1	Tribonema minus UTEX_B_3156	exon	Contig_60 430959..431042 +
exon_6806_2	exon_6806_2	Tribonema minus UTEX_B_3156	exon	Contig_60 431325..431768 +
exon_6806_3	exon_6806_3	Tribonema minus UTEX_B_3156	exon	Contig_60 432455..432490 +
exon_6806_4	exon_6806_4	Tribonema minus UTEX_B_3156	exon	Contig_60 433034..433195 +
exon_6806_5	exon_6806_5	Tribonema minus UTEX_B_3156	exon	Contig_60 433658..434338 +
exon_6806_6	exon_6806_6	Tribonema minus UTEX_B_3156	exon	Contig_60 435224..435358 +
exon_6806_7	exon_6806_7	Tribonema minus UTEX_B_3156	exon	Contig_60 436075..436323 +
exon_6806_8	exon_6806_8	Tribonema minus UTEX_B_3156	exon	Contig_60 436586..436630 +
exon_6806_9	exon_6806_9	Tribonema minus UTEX_B_3156	exon	Contig_60 437279..437356 +
exon_6806_10	exon_6806_10	Tribonema minus UTEX_B_3156	exon	Contig_60 437655..437759 +
exon_6806_11	exon_6806_11	Tribonema minus UTEX_B_3156	exon	Contig_60 438529..438716 +
exon_6806_12	exon_6806_12	Tribonema minus UTEX_B_3156	exon	Contig_60 439399..439530 +
exon_6806_13	exon_6806_13	Tribonema minus UTEX_B_3156	exon	Contig_60 440479..440862 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_6806	CDS_6806	Tribonema minus UTEX_B_3156	CDS	Contig_60 430959..431042 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_6806	UTR3_6806	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_60 440810..440862 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350293	Trimin1\|350293\|estExt_Genemark1.C_Ctg_600064	Tribonema minus UTEX_B_3156	polypeptide	Contig_60 430959..440809 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_60:430959..440862+
coding sequence from alignment at Contig_60:430959..440862+

spliced messenger RNA

>mRNA_6806 ID=mRNA_6806|Name=jgi.p|Trimin1|350293|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2723bp|location=Sequence derived from alignment at Contig_60:430959..440862+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCAACATGAGCACCTTCAGCAGCAGCTGCAGCTGCAGCAGCCCCCGCT
GCCACAGCAGCAGCAGCAGCAGGACCAGTGGCAGGAGCAGCAGCCGCCGC
CGCCGCAGCAGCAGCAGTGGGAAGCGGCTCCTCTACCCGCACACACTTAT
GAGGGGGCCATGCAACAGGAGCAGCAGCAGCAGCAGCCGGCGCCACCTGC
ACGCACCTTCTCACCCATGCCGCTGCGTCGGCAGCTCGACTCGCAGGACA
GCATCCCCGCCCTGCAGCTGCCCGCAGCTCAGGAGCCCGCACAAGCTTGG
CGGCCGTTCGCTGGCGCAGCGCCAGACGCCAGCAGTGCATTGCACGCTGC
CGCGCCGCAGTCCGGTGCAGCTGCGGGATCAGGCGATGCGGGCGCGGACG
ATGCGCTGCGGGCGCGTGTGGCGGAGCTGGAGGCGCAGCTGGCGGCGCAG
GCGCGGCAGCTGGCGCAGACGCGATCGGAGCTGCTGAGGGCGGAGGAGGA
GAAGGATGACCTGCTCGCCTCCGCTGCGGTGGTGGAAGTGGAGAGCAAGC
TGGCAGTGGACCAGGAGTTGAAGCGGCTTGCCAGCGAGTTGAACTTCAAG
GAGCATGCCCTCGGAGAGGCGCAGAAGGAGGGTGCGCGCGCGCGCAGGGA
GCTGGAGGCGCAGCAGGCACAGCTTGTGCAGGTGCAGGCGCAGGCGGAGG
CGCAGGCCGTGGAGAGGCTCAAACGGGAACGGGCGCAGAGCACTGCCGCC
GCCGCCGCCGCCGCCGACTTGCACAGTGCCGATGCGCCGTCCCCCAAGCG
CCCGCGCGTGTCTGCCAGCGGCAGCAGCAGCAGCCACGCGCTCGCAGCAG
CAGCGGCAGCAGCGCCAGCAGCGCCAGCGCTCGGTGCTGCCGACGCGCTT
CGCCTCGCGCACGTTCCCTTTGCGGAGGTGCTCGTGGCGGAGCGCGGCGT
GGAGCTCATGCAGCTGCTGGGGGCGGACCCGACGCTGCCGCCGGCGTACG
AGCGCGGCGCCGCTGCTGCCGCCGCCGCCACCCCCGCTGCCGCGCGCCGC
GCCATCTGCACGCCGGGCCCGACGCCGCTGCGGCCGCCGCTGGGCAGCGC
CGCTGCCGTCCCCGCCGCCGCGGCAGCGGCAGCGACGGCAGCGGCGGCGG
AGTTTGCGGTGACGCCGCTGCCGCGCGCGCACTGCACGCAGTCGTCGTCC
GCGACGGGCAACACGGTGTCGCCGGCGGCGTCCGCGGGCGCGGCGTCGGC
GGCGGGGACGGCGGCGGCGGCGCGGCGCGGTGCGTTCGGCGCGCTGCGGC
GGCAGCTGTTTGAGTGCCTGCGCGACGCGTGGGCGGGGCGCGCGGGGCCT
GGGGAGCTGCTGGCGGTGCTGGTGGGGTTTGTGGAGGCGGCTGGCGGCGG
GAGCGAGCTGTCAGAGCAAGATGTGGCACGGTACTCGCACACCCTGGTGT
CCGCGGTGAGGCTGATGCAGGCAACGCTGGCGCTTTCGCACCAGCTGCGT
GCGGCGCTGCGGCCGACGAGCGCACCTGATGATGACGCTCAGGCGCCGTG
CCGTCCGCTGTGCACCATCTCCGACGCCACGGGCGGCCCCCTCGCCGGCG
CGCAGATGGACGGCCACCTGGCAGCGATGCTCAGCAACGACCCGCACACC
GTTGCCGCCGTTGGCAGCAGCAGCGAACGGGGCCTGCAGCGGCAGCGCGG
CCTGGCGGCGCGGCTGCGGCGCTGCCTCATGCACGCGTTCGTGGGTGGCG
TCGGCGCTCAGGAGGGCGCGCTGGTCACTGCTGCGATGCAGGCCATACTC
ACGTGCACTGCGGAGCTAGAACCGGCAGAGCTCGCGGCAACGTGGAGCGC
GCTGCTGAGCGATGATGCCTTCCACACTATCCTGTGCACCAAATTTGGAA
CCACCGCCATGAAGGAGCTCGCGCTGGATCTGCTGCGGTGCCTGTTCAGG
AGCCGGGACCTGTTCCTGCAGATTGCAACGGGCAATGATGCGCACGCGAC
GCCTGCTGCGCAAGTACAGGACGGCGCCGGTGGTGCAGCGGTTGCGCCGG
GCACCCCTGCGGCACGGGAAGAGGCAGGAGGGGGGGGTGTCGGGGGACAG
GGGGGCAGGCCCTCGCTGCTGCGGCAGCTGTGCGCGCAGCTGTTCACCAT
GGAGAGCGCGCTGCCGGGTGACGCGTCGCTGTATGGACTGTACACGCGCG
CTGTCAGGCTCCTATCGCAAGTGTGCGCCTGCCACGGCAGCGTTGCCACC
AGCCACTTGCTGGAAGACAACGACGGCGGACCCTCGTCTGATGCCGTGCT
GCGCGTACGGCTGATACCAAAGCTCATCAACTTCATCAGTTATGGCGGCG
GTGTTGTCCAAGTGCAACAGCAACGCTCAACAACTTTGCACCGCACTACT
GCTCCCGTCACCTCAGCTGGCGACGGACCTCCAGCACGCCTTCATGAGCC
TGGTCGACGCCCTCTACAACAACAACGAACTCGATGGCCTGGGACTGACG
GCAGCGGCAAAGGCCATGCTGCCGATCGCGAATCAAGTCGCGGCGCACTC
CCTCTGAGTGAACAGCAGTGTCGCGTGTACAAAGACGGTGTGAAAGTGTT
GAAAGCAGACGGATCGTACCTCAGCAGCAGTGCTCAGCACATGTGCCCAT
ACCCATTTCTGCAGTGTTGAAGCCATGTCGTCGAGTGTGTTCTGCAATGT
GACACAGTGCGTGCACTCCAGGC

protein sequence of jgi.p|Trimin1|350293

>Trimin1|350293|estExt_Genemark1.C_Ctg_600064 ID=Trimin1|350293|estExt_Genemark1.C_Ctg_600064|Name=jgi.p|Trimin1|350293|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=890bp
MQHEHLQQQLQLQQPPLPQQQQQQDQWQEQQPPPPQQQQWEAAPLPAHTY
EGAMQQEQQQQQPAPPARTFSPMPLRRQLDSQDSIPALQLPAAQEPAQAW
RPFAGAAPDASSALHAAAPQSGAAAGSGDAGADDALRARVAELEAQLAAQ
ARQLAQTRSELLRAEEEKDDLLASAAVVEVESKLAVDQELKRLASELNFK
EHALGEAQKEGARARRELEAQQAQLVQVQAQAEAQAVERLKRERAQSTAA
AAAAADLHSADAPSPKRPRVSASGSSSSHALAAAAAAAPAAPALGAADAL
RLAHVPFAEVLVAERGVELMQLLGADPTLPPAYERGAAAAAAATPAAARR
AICTPGPTPLRPPLGSAAAVPAAAAAAATAAAAEFAVTPLPRAHCTQSSS
ATGNTVSPAASAGAASAAGTAAAARRGAFGALRRQLFECLRDAWAGRAGP
GELLAVLVGFVEAAGGGSELSEQDVARYSHTLVSAVRLMQATLALSHQLR
AALRPTSAPDDDAQAPCRPLCTISDATGGPLAGAQMDGHLAAMLSNDPHT
VAAVGSSSERGLQRQRGLAARLRRCLMHAFVGGVGAQEGALVTAAMQAIL
TCTAELEPAELAATWSALLSDDAFHTILCTKFGTTAMKELALDLLRCLFR
SRDLFLQIATGNDAHATPAAQVQDGAGGAAVAPGTPAAREEAGGGGVGGQ
GGRPSLLRQLCAQLFTMESALPGDASLYGLYTRAVRLLSQVCACHGSVAT
SHLLEDNDGGPSSDAVLRVRLIPKLINFISYGGGVVQVQQQRSTTLHRTT
APVTSAGDGPPARLHEPGRRPLQQQRTRWPGTDGSGKGHAADRESSRGAL
PLSEQQCRVYKDGVKVLKADGSYLSSSAQHMCPYPFLQC*

mRNA from alignment at Contig_60:430959..440862+

Legend: exonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_6806 ID=mRNA_6806|Name=jgi.p|Trimin1|350293|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9904bp|location=Sequence derived from alignment at Contig_60:430959..440862+ (Tribonema minus UTEX_B_3156 )
ATGCAACATGAGCACCTTCAGCAGCAGCTGCAGCTGCAGCAGCCCCCGCT
GCCACAGCAGCAGCAGCAGCAGGACCAGTGGCAGGTCAATGGCGAACAGC
AGCCAGCACCAGCAGCAGAGCATGGGCAGATTCAGCACCATCAGCCATCG
TTGCCACCTCAGCGGCAGCCATCGCCGATGTTGCAGCAGCAGCATCAGCT
GCTGCCGCTGCCACCAGAGCAACATCAGTGGCAAGCAGGTCAACACTATC
GGCAACAGCAGCAGCGGCAGCACTACCCCGAAAGTGGACAGCACCAGGGG
CCGCAGTGGCACCCTGCCAGTCAAGACCAGCAGCAGCCACAGCAGTTTCA
GCAGCAGGCGCCGCAGGAGCAGCAGCCGCCGCCGCCGCAGCAGCAGCAGT
GGGAAGCGGCTCCTCTACCCGCACACACTTATGAGGGGGCCATGCAACAG
GAGCAGCAGCAGCAGCAGCCGGCGCCACCTGCACGCACCTTCTCACCCAT
GCCGCTGCGTCGGCAGCTCGACTCGCAGGACAGCATCCCCGCCCTGCAGC
TGCCCGCAGCTCAGGAGCCCGCACAAGCTTGGCGGCCGTTCGCTGGCGCA
GCGCCAGACGCCAGCAGTGCATTGCACGCTGCCGCGCCGCAGTCCGGTGC
AGCTGCGGGATCAGGCGATGCGGGCGCGGACGATGCGCTGCGGGCGCGTG
TGGCGGAGCTGGAGGCGCAGCTGGCGGCGCAGGCGCGGCAGCTGGCGCAG
ACGCGATCGGAGCTGCTGAGGGCGGAGGAGGAGAAGGATGACCTGCTCGC
CTCCGCTGCGGTGAGTCGGCGGCGGTGCAGCAATACTGGTCTTGTGCGAA
GTTTAAGAGGCACCTGCGCTGCGATCGCCAGCTTCGCAGCGGGAGGGTAT
GCTGGCTGTTGGCAGCCAGGATGGAACAGCATATTGGTGGCGTGCGTGTA
GAATGGCCTTTGTTTATGGCTGCTCAGCCATCGTGATCGAACAATCATTT
TATGGCACAACTATGGTGCGCAGCGTATCGCACATGCACTGGGGGTGAAA
GCCGGCCTCGCTGGTTCTGCAGTAGGCGATTGGCAGCAGTCGATGGTGTG
AGCATATGCAATGAAGACATCGACAAACTCTTCTGAAACATGGCTGTTAA
CATGTGCACATGTGCAGACGCCAACGAAGCCCTCAAGATTGATTGATACT
CTGGGCTCCAGTTTCTACAGCATCTGTGATAGTACTGTATCGCATCAGCA
TGACACCATGCCTACATTTTGCGCATACATGAGGACTACTGAATATTCAT
GAATTATGCTTAGCATTGACTAGATCAGTAGCGCAATGTCTTCGTATGGG
CACTGCATGAGCAGCTGCTTTCTGGGCTAATAAATTCTGACCCAGAAAAG
CGATGTATGCGCTACGGTCCTAGCACATCAACAGGTGCGCAGAATTGCCT
GCTCGCACGTCTGATTTTGACGCTGGCTGCATGTTACCTCATGCAGGTGG
TGGAAGTGGAGAGCAAGCTGGCAGTGGACCAGGTATGCCAGTTGAAGTTG
CAAGTGGGAGTCTATTCTGTTGCATGCGCTCAGCAATAGACAAAAATTGG
ATTACTTCTCTCATCCTTCCGTGAACATCCGTCAGAAATCAAGTCCACCT
GGTAATGCAGCATCACTTGTAACTCTATCATCATGGTGAAGCGTTAGGGT
GACGCATTCACCTATGACTCAGGAGCAGATCACCTTACAGGAGTCCAAAC
TGAACCCTGCAATTGTGCTGCATCTGACATACATACTTAGATTGTCAAAT
GTGATTGTTATGGCATCCATGTACTTTCCCGCCCGCACAGAGCACAGCAC
TGCTTGCTGCTGACGTTGACCGAAGCGACAGGGAACACATGTTGACGTGT
CAGTTGAGTTGCTGTTTCTGCTGTGCCTGGTTGCAACCGAGGCGTGCAAG
AAGGCTTTATGAACATCTTCTCGCCTCCATGTGCAGCTGCGCGTCATTAC
ACGCTTCACAAACTGCACTGATGTCACTGATCGTGGGCGTCTACCTCACC
TCTTCAACCCATTCCTCAACATCAGGAGTTGAAGCGGCTTGCCAGCGAGT
TGAACTTCAAGGAGCATGCCCTCGGAGAGGCGCAGAAGGAGGGTGCGCGC
GCGCGCAGGGAGCTGGAGGCGCAGCAGGCACAGCTTGTGCAGGTGCAGGC
GCAGGCGGAGGCGCAGGCCGTGGAGAGGCTCAAACGGGTGAGCACCGCTG
CACAACGTAATACCGCTTAACTTTACAGCAGGCATGAACATTGAGGTGGC
CGGGCGAACAACACACGCCAGACTGCCGATATTGGGGAAAAGGAAAGGCG
GCGTGGCATGCAGTAATGCGCACAATTGATTCATTGACTCTAGATGGCGG
GCGTGGTGGCAATTTTTGGGGACAGGTGCCTTGCTGTGACACAAGGATTG
AACCCTTGCCATTCTTGGCATCTTATGCTGATGTGCATGGCAGCACGTCA
CACCATTGAACGCTGCCAAAGCCATGCCTACACAGTGTCAAAGTCAAATT
GGTGTTGATCCCGACTGCGGTAAGGGCGTGCTGCCGCGAACTTACGAGTG
CTCACAGTTGAATCCCGACCGTTCTCTCCCACTTGTAGTTATTGCGCCCA
CTGCAAGCACCAACGCCAGACTGCCGCACGCCGTTGCGCCCATGCGCAGG
AACGGGCGCAGAGCACTGCCGCCGCCGCCGCCGCCGCCGACTTGCACAGT
GCCGATGCGCCGTCCCCCAAGCGCCCGCGCGTGTCTGCCAGCGGCAGCAG
CAGCAGCCACGCGCTCGCAGCAGCAGCGGCAGCAGCGCCAGCAGCGCCAG
CGCTCGGTGCTGCCGACGCGCTTCGCCTCGCGCACGTTCCCTTTGCGGAG
GTGCTCGTGGCGGAGCGCGGCGTGGAGCTCATGCAGCTGCTGGGGGCGGA
CCCGACGCTGCCGCCGGCGTACGAGCGCGGCGCCGCTGCTGCCGCCGCCG
CCACCCCCGCTGCCGCGCGCCGCGCCATCTGCACGCCGGGCCCGACGCCG
CTGCGGCCGCCGCTGGGCAGCGCCGCTGCCGTCCCCGCCGCCGCGGCAGC
GGCAGCGACGGCAGCGGCGGCGGAGTTTGCGGTGACGCCGCTGCCGCGCG
CGCACTGCACGCAGTCGTCGTCCGCGACGGGCAACACGGTGTCGCCGGCG
GCGTCCGCGGGCGCGGCGTCGGCGGCGGGGACGGCGGCGGCGGCGCGGCG
CGGTGCGTTCGGCGCGCTGCGGCGGCAGCTGTTTGAGTGCCTGCGCGACG
CGTGGGCGGGGCGCGCGGGGCCTGGGGAGCTGCTGGCGGTGCTGGTGGGG
TTTGTGGAGGCGGCTGGCGGCGGGAGCGAGGTGCGCAGTGCGCGGAGGGC
GTGCGGATGTGTTTGGCGTTGCGCGTGGTGTGTCGCAGGTGGCGTGGTGG
TGAGGGGTCGGGCATGGGGTCATGCGCGCTTCACACGCGTGGGTGCTGCG
CGACGAGAGGGGCGACGTATTGACAGGGGCATTGTTGGGGAGGGGTGGGG
GGGGTGAGGGGGTGGGGGGGGGGGGGTACGGCAGTCATGTTTGAAAGTGC
TTCAAGGTAGCTAGAGGACCTAGAAGTATACAACTGTACTGCTTAGTCTT
GAACTCCAAAGAACACTGCAGTGGATGGTTTGCAGCATGGGTGCGCGCAG
CAAGAGCTCCGCCAGATTGACAAGGGCATTGTTGTGTGGGATCGGGGATG
GGGGTGGGGTGGGTCTGGGGCAGTGATGTTTGAAAGTACTTCAAGGTAGC
TGAACGGACCTGCACGACTGTACCGCTTGTTCTTGAACTCTGATAAACAC
TGCAGTGGATGATTCAACGAGGGCTGAGGTCAGGCGCCTTGTCTTCCGGC
AGATCGTGCATTACATTGAATGCATGTATAGGTCAGGTGTGGCGCGATGA
GAGCCTGCACTCTGGCTGATTGCTTGGTACAAGAAGCTCAGCAGAATACC
TTTGAATAACAATTGCCTTGTACTGTTTATACAGCACATGGACCTACATA
CTGCATTATCTTTGAACAGATGCTTTGGGTCTCATCTACAAGCACCTTCA
AGCACCCATAGCTGATGGTGCGCAAACCCAACCGGACGCCTCACACGGCG
CCGCCACTGTTGTACCCATTCCTCTCCATACTACATGCCCTATTGCCGCT
TGTTGACGACTCAGCGTTGCCCCCCCTCCCCCCCCCGCGCCCCCCTCAAC
CCCTTCACACTGCAGCTGTCAGAGCAAGATGTGGCACGGTACTCGCACAC
CCTGGTGTCCGCGGTGAGGCTGATGCAGGCAACGCTGGCGCTTTCGCACC
AGCTGCGTGCGGCGCTGCGGCCGACGAGCGCACCTGATGATGACGCTCAG
GTGACCGCAGCGCTCAGATGTGGACACTGTCTTGAACTTCAACATTTGAA
GTCTGCAAGTCTGACAGTTACAATGTGTAGTTTGAAGCAAATGTTTGCGA
CACATGGCACCAGTGCTGCCTTCCGTTTCTTCGGTGTTGACTAGAAGTAT
TTCAGCTCTGTATTGTTGCCGGTCTATGCACGTGCTGTTAGTCTGGCCTT
ATGGACGTACATTTGGCTATTGTAGGCCATCAAAGTGGCTGATGATACAA
TACCAGCGTTGGCTGCTTCAAACCCAGCCTGAGCAAGACGTAGCTTTTGG
AACATGCCAGTGGGTTGCATGAAGTTGTAGCTGCGTTGCTGGACATTGAT
GCTCAGCTTCCTGTGAGACTGCGGCCAATCTGCAGCTCCATCTCAGTGCG
GCGCATGAGCGCGTCACCATCTGTAGTTGGCGCGTCACTGTTTGCAGCCA
ACATGCCTCAACACTCATTGACACCGGTTCGTGAATATTTGATCAGATGT
CAGCCCTTCTCTTGTACGCGCTACATGCACTGCTATCATGCTGCCTCCAC
CGCAGGCCTGCACACACACACCAGAACACACCGTCTTCTGAGCTGTGCAT
CACCACAGTGTTTTGCAACGCACACACATCCCCCCTGCGCCAGATACACC
GTGATACGCCATCGCCCCCAACGCTCAACACGCGTGGCCACCGCCGTTCT
GCCTCGCTGCCCTCAGGCGCCGTGCCGTCCGCTGTGCACCATCTCCGACG
CCACGGGCGGCCCCCTCGCCGGCGCGCAGATGGACGGCCACCTGGCAGCG
ATGCTCAGCAACGACCCGCACACCGTTGCCGCCGTTGGCAGCAGCAGCGA
ACGGGGCCTGCAGCGGCAGCGCGGCCTGGCGGCGCGGCTGCGGCGCTGCC
TCATGCACGCGTTCGTGGGTGGCGTCGGCGCTCAGGAGGGCGCGCTGGTC
ACTGCTGCGATGCAGGTGCGTCCCCTGGGGTGGCGGGTGTGTGTGTGTGG
GGGGGGACAGCAGGGCGGCGCGCGTCCTGCTCGTGTTCCGCTCTTCACCG
TGACAGCGCGGCTCAAGTGCCATCCGTTCACTTGCCGGGCGCCCGCCCGC
ACCTGCGTTATTTGGGCACTTTGAGAGCATCGTGTTATTTAAGCACTACA
AAGCGGGTCATCCATCCGTGCACCCCCCAGCTGGTGTTTTCTGAGCATTT
GCTGTGCTGTTGTGGTCATGCGTGCAGGCCATACTCACGTGCACTGCGGA
GCTAGAACCGGCAGAGCTCGCGGTGAGTGCGTCTCAAAGAGGCTGCCGTG
AGATGCCTTGCTGCACGCGCAAAGTGTCGTGTTCATGCGAGGCAAAGCGG
AATATCACCAGGTTCAACCAGAGCCAACCAAAGAGTTGACCGCTGCGAGT
GCTGTTCTGAAATGCATGTTATGTTGTGTCGCCAGTTCTCGCTTGTCCGC
TTCGCACCAAGCCTGCGCACGTGTATATACAGCAAGCGACACCTCGGACA
ACTGCAGTCCTGCTGACCAACGTGGCAAAAAGCGTATTGGGTATTTGTGG
CTCCAGTGGACATCTGGGTGCATTGCTGGTCAGGTTAGGGTGAGGGGTAG
GGCTTGACACCAGAAACGGTGCACTTGCTCGGCGGGTACCCCACCAGAAG
TGACTGTTACAGCAGCTTGCTAACCTCATTGCTGTATCCGAGCCAGCATT
GATCTCATTAGCTTTCTTCGCTTAGCAGATTCTGTATCCACCTGATTGTA
CAAGCAACACACGCGCGTCCTAGAGCTAACATTTGCGTGCATAGCGCAAC
AAGACCAGGGGGCGATGGCGTCTTCTACCTTTGAAGTCTGACCTGAAGTT
CACCCTTGCTACTTTCAAGACAACACATCACATGCAACAGCTGACACACT
GCTTCGCTCCCGCTCTGCAGGCAACGTGGAGCGCGCTGCTGAGCGATGAT
GCCTTCCACACTATCCTGTGCACCAAATTTGGAACCACCGCCATGAAGGT
GAGCTTATGTGTGTATGGTGCCAGTTGTACACAAGCGCCCACCTTCATTA
GTGACGTGGCTTGCACACGCTTGCTGCATAGACACTCAATTGTGCCGTAG
ACCTCTGCTGCTGCAGTGCTGCGCCTTTGAGAGTCGCCGCTTTGCTCACC
ATATGCATGTTGGGCCTGCAGCACCAGTCTAGTCATCATGAATACGCCGG
CTCACCGCAGCTGCAGCATGCTAAAGCAACAATGAATCCACGGAATTGTT
CTATTCATTGATGAGCCGTGCTATGCTGACCCAACATCAACTGCAGGAGC
TCGCGCTGGATCTGCTGCGGTGCCTGTTCAGGAGCCGGGACCTGTTCCTG
CAGATTGCAACGGGCAATGATGCGCACGCGACGCCTGCTGCGCAAGTACA
GGTACCGCAAGCAACCCTAACCCTTGCTGCCATCTTCTCGCCCCTTTGAC
GTTGCTCAGTCAAGTCTGTGTCAAGAGGCAGTGCACGCAATCGTAGTGCA
CGCCATCGTAGTGTGAGCGGTGCGCTCAAGTCATTGGCTCACTGGAAGCA
ATGTGCCGCGGTATGTCACAGCTTGTGTGTGATTGACACGGCTTCAACCT
GCACGGGTAGTCGTGTCCGTCATTTGCATGCTTATCTGCATCGTTGCCAC
TCTGTGCAGCAATCCACTACGTAGCAGGGCGCAGCGTTCATGTGTTCTGA
ATAGGTACTGTGGGCTGTTATATCATGCGCCTTCTGGTGCTCCTCGCTTC
AAAGCTGCTTGCTCCACATTGCTGCGTTGGAAGATGTGGGGCTGCTGGCA
CAGGTGCATTTGTTGTGACGATCTTGCTGCCCCTCTGTCACCTCAACCTT
CAACTTCAACAGGAGCTCGCATGTGACAATGTGGTTGTTTGATACACTGC
TGGGGATGCGGTGCCGCTGCTGAGGCTACTGCTGCATAGTGCTCTGTCGC
TGCTCGTGGGCCCACACTTCTACAAGTGACGAGCGCTGCTGTGTCGCTGA
GCATCAGCCGTGCAAGCGCAGCGCTCACAGAGCTCTGACGTTCTACGCAC
TGCGCACCACCCCCATATTGTTCAGCCAGTCACAGCCGCTAACATGATGC
TGATACTAGAAGTTCAACAAGCTATATGATGCCATATGATGCTAATGAAA
GGGGGTGGCTCATGGTGCAGGACGGCGCCGGTGGTGCAGCGGTTGCGCCG
GGCACCCCTGCGGCACGGGAAGAGGCAGGAGGGGGGGGTGTCGGGGGACA
GGGGGGCAGGCCCTCGCTGCTGCGGCAGCTGTGCGCGCAGCTGTTCACCA
TGGAGAGCGCGCTGCCGGGTGACGCGTCGCTGTATGGACTGTACACGCGC
GCTGTCAGGTGGGGGGCTTGGGCGGCATGCGCATCATACCTACATACACC
ATGTGATGCATCAGCGTATCATCATGTCTGTAGATGTGCCGTAGCCGGGG
CAGCGCGTGCGTGCTTTACAGCTTTTCAGGAGCTTGTGGCGTGTTGTGCA
TCGCAGCCAGCACATGACTACGAGTGCGCAAAAAGCGTCGTGTAGGATGG
AGGGCGGAGTGGCTCTGTCAGCTCGTCAACTGTGTATAGAACTATGTCAC
ATTTCACGGTGTGAGAGTGTCTGTTGCCGTTGTGAGGTGCGCATTACGGG
CTTATGAAGCTTGTGCCGTGCTGTGCATTGCGAAACACTGCAGCAGTTGC
ATTGCAGCCAGTTCGTGACTGAGGCATACTCATAGCCACGAAGCACAATC
GCCCCGTGTGCTTCAAATTAGACTTGATTCTTGGTTTGTTGACTGGTTGA
AGTACCTCACCAACTGAACAGAAAAGGATCTATCACCTGACAGCCTCAGT
ACTTGTGCAATTTAGGAGTGCAGAACACTGCAGACATGCTTCACACGTAT
ACCTCCAGGTATATCCACAAGCGCTCATGGCAGTCATTTTACATACTTGC
ACCCCTATGTCATGCACGTTCTACAACGGCTCTCAAGACATGGCGGCCTG
CGCCTCATATAGTGCTGCCTGCCTCTTGCATTGCTCACAGGCTCCTATCG
CAAGTGTGCGCCTGCCACGGCAGCGTTGCCACCAGCCACTTGCTGGAAGA
CAACGACGGCGGACCCTCGTCTGATGCCGTGCTGCGCGTACGGCTGATAC
CAAAGCTCATCAACTTCATCAGGTGCGGGACCGTCCGTGAGGGGCGAGGC
TTGCAGCGTCTGCTGCATGTGTGCGGCGATGCAGCAAAGCATCTGACCTC
GATGATTGCCGCACACGAGTCGCGGCCTCTGCCTGACCAAAGCTTACTTC
GGTAGATGAGTTCACCAGCTGCTGATGCAGGTTGTCACTTGCAGAGGCTG
AGCACTGCGCGGTCGTTGAATTGGTGTAGTGGTGCATGTGACCATTGACC
ATATCATCTCATGAAGTGTGACGCCCCACCAAGACTAGCTGGGGCTGCTG
TACCTGCGCACGCCGCGAACTCATGCGCGCGCCACAGCAGCGGACTCGTG
CCACGTGCACTCTCTGTGCGAACAGACATATCCTTCAAAGAAGTACACCA
TATCCATTGATGCGCATCGCTCCACCGCCATGCATTTCTTTGCAAGAACA
CGTTGAAGTATACTTTGGAAGTATCCACTCATGCGCATCGCTCAACCGCC
GCTGCGCGCGCGCGCAGGCACGAGGTCGATGCATGGGAGCGCAGGCGCGA
CTCGCACGGCCGGCGCGCCTGGCACCTGGGCGGGCCCTACGAGGGCCCCC
CGCAGGCAGAGGCAGCAGCGCTCATCAGAGAGACGTTCCATCTGCTGCGG
CTGCTGGTGCCCTACTCCGCGCGCCCCATACACGAGCTGGTGGTGCGTCG
ACGCAATCCGGGTCGAGCTGAGCGTTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCCC
TTTCATTGTGTGTCGGATCTCATTTGCAGTCAAGGCCGCTCGTCAATGAT
TGTCGTCATAACTGCTGCTTGAAGTTCAGGCTGTTGGATCTTCTTGCTGG
ATCATGTGGCATGCTATTAACGGCCAGACCCTTGCTTTTGATGGGCAATG
CACGTTGTTGTCTCCCGCAGTTATGGCGGCGGTGTTGTCCAAGTGCAACA
GCAACGCTCAACAACTTTGCACCGCACTACTGCTCCCGTCACCTCAGCTG
GCGACGGACCTCCAGCACGCCTTCATGAGCCTGGTCGACGCCCTCTACAA
CAACAACGAACTCGATGGCCTGGGACTGACGGCAGCGGCAAAGGCCATGC
TGCCGATCGCGAATCAAGTCGCGGCGCACTCCCTCTGAGTGAACAGCAGT
GTCGCGTGTACAAAGACGGTGTGAAAGTGTTGAAAGCAGACGGATCGTAC
CTCAGCAGCAGTGCTCAGCACATGTGCCCATACCCATTTCTGCAGTGTTG
AAGCCATGTCGTCGAGTGTGTTCTGCAATGTGACACAGTGCGTGCACTCC
AGGC

Coding sequence (CDS) from alignment at Contig_60:430959..440862+

>mRNA_6806 ID=mRNA_6806|Name=jgi.p|Trimin1|350293|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2670bp|location=Sequence derived from alignment at Contig_60:430959..440862+ (Tribonema minus UTEX_B_3156 )
ATGCAACATGAGCACCTTCAGCAGCAGCTGCAGCTGCAGCAGCCCCCGCT
GCCACAGCAGCAGCAGCAGCAGGACCAGTGGCAGGAGCAGCAGCCGCCGC
CGCCGCAGCAGCAGCAGTGGGAAGCGGCTCCTCTACCCGCACACACTTAT
GAGGGGGCCATGCAACAGGAGCAGCAGCAGCAGCAGCCGGCGCCACCTGC
ACGCACCTTCTCACCCATGCCGCTGCGTCGGCAGCTCGACTCGCAGGACA
GCATCCCCGCCCTGCAGCTGCCCGCAGCTCAGGAGCCCGCACAAGCTTGG
CGGCCGTTCGCTGGCGCAGCGCCAGACGCCAGCAGTGCATTGCACGCTGC
CGCGCCGCAGTCCGGTGCAGCTGCGGGATCAGGCGATGCGGGCGCGGACG
ATGCGCTGCGGGCGCGTGTGGCGGAGCTGGAGGCGCAGCTGGCGGCGCAG
GCGCGGCAGCTGGCGCAGACGCGATCGGAGCTGCTGAGGGCGGAGGAGGA
GAAGGATGACCTGCTCGCCTCCGCTGCGGTGGTGGAAGTGGAGAGCAAGC
TGGCAGTGGACCAGGAGTTGAAGCGGCTTGCCAGCGAGTTGAACTTCAAG
GAGCATGCCCTCGGAGAGGCGCAGAAGGAGGGTGCGCGCGCGCGCAGGGA
GCTGGAGGCGCAGCAGGCACAGCTTGTGCAGGTGCAGGCGCAGGCGGAGG
CGCAGGCCGTGGAGAGGCTCAAACGGGAACGGGCGCAGAGCACTGCCGCC
GCCGCCGCCGCCGCCGACTTGCACAGTGCCGATGCGCCGTCCCCCAAGCG
CCCGCGCGTGTCTGCCAGCGGCAGCAGCAGCAGCCACGCGCTCGCAGCAG
CAGCGGCAGCAGCGCCAGCAGCGCCAGCGCTCGGTGCTGCCGACGCGCTT
CGCCTCGCGCACGTTCCCTTTGCGGAGGTGCTCGTGGCGGAGCGCGGCGT
GGAGCTCATGCAGCTGCTGGGGGCGGACCCGACGCTGCCGCCGGCGTACG
AGCGCGGCGCCGCTGCTGCCGCCGCCGCCACCCCCGCTGCCGCGCGCCGC
GCCATCTGCACGCCGGGCCCGACGCCGCTGCGGCCGCCGCTGGGCAGCGC
CGCTGCCGTCCCCGCCGCCGCGGCAGCGGCAGCGACGGCAGCGGCGGCGG
AGTTTGCGGTGACGCCGCTGCCGCGCGCGCACTGCACGCAGTCGTCGTCC
GCGACGGGCAACACGGTGTCGCCGGCGGCGTCCGCGGGCGCGGCGTCGGC
GGCGGGGACGGCGGCGGCGGCGCGGCGCGGTGCGTTCGGCGCGCTGCGGC
GGCAGCTGTTTGAGTGCCTGCGCGACGCGTGGGCGGGGCGCGCGGGGCCT
GGGGAGCTGCTGGCGGTGCTGGTGGGGTTTGTGGAGGCGGCTGGCGGCGG
GAGCGAGCTGTCAGAGCAAGATGTGGCACGGTACTCGCACACCCTGGTGT
CCGCGGTGAGGCTGATGCAGGCAACGCTGGCGCTTTCGCACCAGCTGCGT
GCGGCGCTGCGGCCGACGAGCGCACCTGATGATGACGCTCAGGCGCCGTG
CCGTCCGCTGTGCACCATCTCCGACGCCACGGGCGGCCCCCTCGCCGGCG
CGCAGATGGACGGCCACCTGGCAGCGATGCTCAGCAACGACCCGCACACC
GTTGCCGCCGTTGGCAGCAGCAGCGAACGGGGCCTGCAGCGGCAGCGCGG
CCTGGCGGCGCGGCTGCGGCGCTGCCTCATGCACGCGTTCGTGGGTGGCG
TCGGCGCTCAGGAGGGCGCGCTGGTCACTGCTGCGATGCAGGCCATACTC
ACGTGCACTGCGGAGCTAGAACCGGCAGAGCTCGCGGCAACGTGGAGCGC
GCTGCTGAGCGATGATGCCTTCCACACTATCCTGTGCACCAAATTTGGAA
CCACCGCCATGAAGGAGCTCGCGCTGGATCTGCTGCGGTGCCTGTTCAGG
AGCCGGGACCTGTTCCTGCAGATTGCAACGGGCAATGATGCGCACGCGAC
GCCTGCTGCGCAAGTACAGGACGGCGCCGGTGGTGCAGCGGTTGCGCCGG
GCACCCCTGCGGCACGGGAAGAGGCAGGAGGGGGGGGTGTCGGGGGACAG
GGGGGCAGGCCCTCGCTGCTGCGGCAGCTGTGCGCGCAGCTGTTCACCAT
GGAGAGCGCGCTGCCGGGTGACGCGTCGCTGTATGGACTGTACACGCGCG
CTGTCAGGCTCCTATCGCAAGTGTGCGCCTGCCACGGCAGCGTTGCCACC
AGCCACTTGCTGGAAGACAACGACGGCGGACCCTCGTCTGATGCCGTGCT
GCGCGTACGGCTGATACCAAAGCTCATCAACTTCATCAGTTATGGCGGCG
GTGTTGTCCAAGTGCAACAGCAACGCTCAACAACTTTGCACCGCACTACT
GCTCCCGTCACCTCAGCTGGCGACGGACCTCCAGCACGCCTTCATGAGCC
TGGTCGACGCCCTCTACAACAACAACGAACTCGATGGCCTGGGACTGACG
GCAGCGGCAAAGGCCATGCTGCCGATCGCGAATCAAGTCGCGGCGCACTC
CCTCTGAGTGAACAGCAGTGTCGCGTGTACAAAGACGGTGTGAAAGTGTT
GAAAGCAGACGGATCGTACCTCAGCAGCAGTGCTCAGCACATGTGCCCAT
ACCCATTTCTGCAGTGTTGA