Trimin1|349938|estExt_Genemark1.C_Ctg_520019 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349938
Unique NameTrimin1|349938|estExt_Genemark1.C_Ctg_520019
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length225
Homology
BLAST of jgi.p|Trimin1|349938 vs. uniprot
Match: A0A836CAP6_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAP6_9STRA)

HSP 1 Score: 506 bits (1302), Expect = 4.610e-182
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
Query:    1 MGAGLCPLLVCCPKNCPLCANRANCLKNADDPSCCPKKDITTSLQRVDTGLSDIEVSCRYKAPPCTMPPADDPCVGQHGDRVVCLRNARCGVRYVSDDPGYVQGTSTSADNGCIGTEFYCKCPEGVTGRRCERKCKKGQTACGYGFDPVCVRVGEHYGYTTKCVPKGHPEKCSPSAWAHPQLPDPCQNGGKCVNLNYWQQPYNAAYVCRCAKGFHGPLCQYKDK 224
            MGAGLCPLLVCCPKNCPLCANRANCLKNADDPSCCPKKDITTSLQRVDTGLSDIEVSCRYKAPPCTMPPADDPCVGQHGDRVVCLRNARCGVRYVSDDPGYVQGTSTSADNGCIGTEFYCKCPEGVTGRRCERKCKKGQTACGYGFDPVCVRVGEHYGYTTKCVPKGHPEKCSPSAWAHPQLPDPCQNGGKCVNLNYWQQPYNAAYVCRCAKGFHGPLCQYKDK
Sbjct:    1 MGAGLCPLLVCCPKNCPLCANRANCLKNADDPSCCPKKDITTSLQRVDTGLSDIEVSCRYKAPPCTMPPADDPCVGQHGDRVVCLRNARCGVRYVSDDPGYVQGTSTSADNGCIGTEFYCKCPEGVTGRRCERKCKKGQTACGYGFDPVCVRVGEHYGYTTKCVPKGHPEKCSPSAWAHPQLPDPCQNGGKCVNLNYWQQPYNAAYVCRCAKGFHGPLCQYKDK 224          
BLAST of jgi.p|Trimin1|349938 vs. uniprot
Match: A0A836CBA5_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBA5_9STRA)

HSP 1 Score: 409 bits (1050), Expect = 5.950e-143
Identity = 183/241 (75.93%), Postives = 200/241 (82.99%), Query Frame = 0
Query:    1 MGAGLCPLLVCCPKNCPLCANRANCLKNADDPSCCPKKDITTSLQRVDTGLSDIEVSCRYKAPPCTMPPADDPCVGQHGDRVVCLRNARCGVRYVSDDPGYVQGTSTSADNGCIGTEFYCKCPEGVTGRRCERKCKKGQTACGYGFDPV-----------------CVRVGEHYGYTTKCVPKGHPEKCSPSAWAHPQLPDPCQNGGKCVNLNYWQQPYNAAYVCRCAKGFHGPLCQYKDK 224
            MGAGLCPLLVCCPKNCPLCA+RANCLK+ADDPSCCPK DI TSLQ +DTGLSDIEVSCRYKAPPCTMPPADDPCV +HG   VC ++ARCGVRYVSD P YVQGTSTS D+GCIG E YC CPEG TG RCERKCKKGQT CGYG+ PV                 CV+VGEH+GY T+C+PKG P+KC+PS + HPQ+PDPC+NGGKCVNLNYWQQP  AAYVCRCAKGFHGPLCQYKDK
Sbjct:   30 MGAGLCPLLVCCPKNCPLCADRANCLKHADDPSCCPKPDIATSLQHIDTGLSDIEVSCRYKAPPCTMPPADDPCVDRHG--AVCRQDARCGVRYVSDAPSYVQGTSTSTDSGCIGAEAYCACPEGFTGPRCERKCKKGQTPCGYGYSPVRSKSFGPNDICCARDRVCVKVGEHWGYNTRCLPKGRPQKCTPSKFTHPQVPDPCRNGGKCVNLNYWQQPQYAAYVCRCAKGFHGPLCQYKDK 268          
BLAST of jgi.p|Trimin1|349938 vs. uniprot
Match: A0A836CBW0_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBW0_9STRA)

HSP 1 Score: 417 bits (1071), Expect = 8.710e-143
Identity = 194/261 (74.33%), Postives = 206/261 (78.93%), Query Frame = 0
Query:    1 MGAGLCPLLVCCPKNCPLCANRANCLKNADDPSCCPKKDITTSLQRVDTGLSDIEVSCRYKAPPCTMPPADDPCVGQHGDRVVCLRNARCGVRYVSDDPGYVQ------------GTSTSADNGCIGTEFYCKCPEGVTGRRCERKCKKGQTACGYGFDP-------------------------VCVRVGEHYGYTTKCVPKGHPEKCSPSAWAHPQLPDPCQNGGKCVNLNYWQQPYNAAYVCRCAKGFHGPLCQYKDK 224
            MGAGLCPLLVCCPKNCPLCANRANCLKNA +PSCCP+KDI  +LQR+DTGLSDIEVSCRYKAPPCTMPPADDPCVGQHGDRVVCLRNARCGVRYVSDDPGYVQ            GT+TS DNGCIGTEFYC+C + VTG RCERKCKKGQTACGY FDP                         VC RVGE YG+TTKC+PKGHP+KCSPS WAHPQLPDPCQNGGKCVN+N  Q    AAY+C CAKGFHGPLCQYKDK
Sbjct:  234 MGAGLCPLLVCCPKNCPLCANRANCLKNAKNPSCCPEKDIAATLQRIDTGLSDIEVSCRYKAPPCTMPPADDPCVGQHGDRVVCLRNARCGVRYVSDDPGYVQEDLAYYALGGVQGTTTSTDNGCIGTEFYCECAKDVTGSRCERKCKKGQTACGYEFDPYRSKDFRPNDIARNAPMSGYRHTVLVCERVGEKYGFTTKCLPKGHPKKCSPSPWAHPQLPDPCQNGGKCVNINSNQVAQYAAYLCDCAKGFHGPLCQYKDK 494          
BLAST of jgi.p|Trimin1|349938 vs. uniprot
Match: A0A836CCT3_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCT3_9STRA)

HSP 1 Score: 343 bits (879), Expect = 2.820e-116
Identity = 163/258 (63.18%), Postives = 183/258 (70.93%), Query Frame = 0
Query:    1 MGAGLCPLLVCCPKNCPLCANRANCLKNADDPSCCPKKDITTSLQRVDTGLSDIEVSCRYKAPPCTMPPADDPCVGQHGDRVVCLRNARCGVRYVSDDPGYVQGTSTSADNGCIGTEFYCKCPEGVTGRRCERKCKKGQTACGY--------GFDP---------VCVRVGEHYGYTTKCVPKGHPEKCSPSAWAHPQLP-----------------DPCQNGGKCVNLNYWQQPYNAAYVCRCAKGFHGPLCQYKDK 224
            MGAGLCP+LVCCPKNCPLCA+RANCLK+ADDPSCCPK+DI T+L  +DTGLSDIEVSCRYKAPPCTMPPADDPCVG      +C ++ARCGVRY+SDDP YVQGT+TS DNGCIGTE YC CP G TGRRCERKCKKGQTACGY        GF P         VC+RV E +G+ T C+P+GHP                               +PCQNGG+CVNLN +QQ    AYVCRCAKGFHG LCQ+KDK
Sbjct:   56 MGAGLCPMLVCCPKNCPLCADRANCLKHADDPSCCPKQDIATTLLHIDTGLSDIEVSCRYKAPPCTMPPADDPCVGTQAS--MCRQDARCGVRYISDDPSYVQGTTTSTDNGCIGTESYCACPAGFTGRRCERKCKKGQTACGYEVISYHSKGFTPNDICCARNQVCMRVAERFGFKTLCLPEGHPNDSGTXXXXXXXXXXXXXXXXXXXXXKKCTLNPCQNGGRCVNLNEYQQDQYGAYVCRCAKGFHGALCQFKDK 311          
BLAST of jgi.p|Trimin1|349938 vs. uniprot
Match: A0A8C6U631_9GOBI (Uncharacterized protein n=2 Tax=Neogobius melanostomus TaxID=47308 RepID=A0A8C6U631_9GOBI)

HSP 1 Score: 60.8 bits (146), Expect = 3.280e-7
Identity = 36/104 (34.62%), Postives = 48/104 (46.15%), Query Frame = 0
Query:  117 EFYCKCPEGVTGRRCERKCKKGQTACGYGFDPVCVRVGEHYGYTTKCVPKGHPEKCSPSAWAHPQLPDPCQNGGKCVNLNYWQQPYNAAYVCRCAKGFHGPLCQ 220
            +F C CP+   G++C ++CK+GQ  CG G    CV   +   Y  KC     P  C       P   +PCQNGG CV            + C C+ GF G LC+
Sbjct:   97 KFKCDCPKPFKGKKCPKRCKRGQ--CGRG---ECVVTSKPPYYECKCKAPFLPPNCVDYEVCEP---NPCQNGGTCVRDGN-------DFDCTCSPGFTGRLCK 185          
BLAST of jgi.p|Trimin1|349938 vs. uniprot
Match: A0A6I9NF02_9TELE (hyaluronan-binding protein 2 n=7 Tax=Notothenioidei TaxID=8205 RepID=A0A6I9NF02_9TELE)

HSP 1 Score: 60.1 bits (144), Expect = 6.320e-7
Identity = 35/105 (33.33%), Postives = 48/105 (45.71%), Query Frame = 0
Query:  118 FYCKCPEGVTGRRCER---KCKKGQTACGYGFDPVCVRVGEHYGYTTKCVPKGHPEKCSPSAWAHPQLPDPCQNGGKCVNLNYWQQPYNAAYVCRCAKGFHGPLC 219
            F C CP+   G++C+R    C++G+  CG G    CV +     Y  KC     P  C   +   P   +PC+NGGKCVN           + C+C  GF G  C
Sbjct:  112 FECDCPKPFKGKKCQRGPKACRRGR--CGRG---ECVLISNRPYYECKCKAPFQPPHCRSYSLCEP---NPCRNGGKCVNEGN-------DFDCQCQAGFRGRFC 201          
BLAST of jgi.p|Trimin1|349938 vs. uniprot
Match: UPI000719DB15 (adhesive plaque matrix protein 2-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719DB15)

HSP 1 Score: 56.2 bits (134), Expect = 9.960e-6
Identity = 34/127 (26.77%), Postives = 59/127 (46.46%), Query Frame = 0
Query:  117 EFYCKCPEGVTGRRCERK------------CKKGQ---TACGYGFDPVCVRVGEHYGYTTKCVPKGHPEKCSPSAWAHPQL--PDPCQNGGKCV--NLNYWQQPYNAA-YVCRCAKGFHGPLCQYKD 223
            +FYC+CP G +G RCER             C+ G    T+  +G+D     V     +  KC       +C     ++P    P+PC+NGG C+  + N W + + +  + C+C + + G  C++ +
Sbjct:  230 DFYCRCPTGYSGTRCERDESSNSDYCYSNPCRNGGVCLTSSSHGWDRSWGSVN----FYCKCPRDYSGTRCERYESSNPDYCHPNPCRNGGVCLTSSSNGWDRSWGSVNFYCKCPRDYSGRHCEHYE 352          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349938 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A836CAP6_9STRA4.610e-182100.00EGF-like domain-containing protein n=1 Tax=Tribone... [more]
A0A836CBA5_9STRA5.950e-14375.93EGF-like domain-containing protein n=1 Tax=Tribone... [more]
A0A836CBW0_9STRA8.710e-14374.33EGF-like domain-containing protein n=1 Tax=Tribone... [more]
A0A836CCT3_9STRA2.820e-11663.18EGF-like domain-containing protein n=1 Tax=Tribone... [more]
A0A8C6U631_9GOBI3.280e-734.62Uncharacterized protein n=2 Tax=Neogobius melanost... [more]
A0A6I9NF02_9TELE6.320e-733.33hyaluronan-binding protein 2 n=7 Tax=Notothenioide... [more]
UPI000719DB159.960e-626.77adhesive plaque matrix protein 2-like n=1 Tax=Pria... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000742EGF-like domainSMARTSM00181egf_5coord: 171..220
e-value: 1.1E-4
score: 31.5
coord: 73..132
e-value: 14.0
score: 14.3
IPR000742EGF-like domainPFAMPF00008EGFcoord: 183..217
e-value: 6.9E-7
score: 29.5
IPR000742EGF-like domainPROSITEPS01186EGF_2coord: 208..219
IPR000742EGF-like domainPROSITEPS00022EGF_1coord: 208..219
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 168..220
score: 13.182812
NoneNo IPR availableGENE3D2.10.25.10Laminincoord: 176..224
e-value: 1.3E-10
score: 42.8
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 179..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_52contigContig_52:132874..137534 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349938mRNA_9919Tribonema minus UTEX_B_3156 mRNAContig_52 132874..137546 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349938|estExt_Genemark1.C_Ctg_520019 ID=Trimin1|349938|estExt_Genemark1.C_Ctg_520019|Name=jgi.p|Trimin1|349938|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=225bp
MGAGLCPLLVCCPKNCPLCANRANCLKNADDPSCCPKKDITTSLQRVDTG
LSDIEVSCRYKAPPCTMPPADDPCVGQHGDRVVCLRNARCGVRYVSDDPG
YVQGTSTSADNGCIGTEFYCKCPEGVTGRRCERKCKKGQTACGYGFDPVC
VRVGEHYGYTTKCVPKGHPEKCSPSAWAHPQLPDPCQNGGKCVNLNYWQQ
PYNAAYVCRCAKGFHGPLCQYKDK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom