Trimin1|167652|e_gw1.52.74.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|167652
Unique Name	Trimin1\|167652\|e_gw1.52.74.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	154

Homology

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BLAST of jgi.p|Trimin1|167652 vs. uniprot
Match: A0A835YSS0_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSS0_9STRA)

HSP 1 Score: 310 bits (794), Expect = 6.030e-107
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0

Query:    1 MSTALRTLGAALGVALFRRLIWRPWGERRRKKKLQKILKAGVRAIEKDPDILNLQLNIAENKRMLDSTLEVAREWEKRLYALPDRNADGRISRPEFDDYMARYKRMHTELRDPDLPRWEEMDTDRTGFITFQEWLDYMDRIRRQRAAMDAYGY 153
            MSTALRTLGAALGVALFRRLIWRPWGERRRKKKLQKILKAGVRAIEKDPDILNLQLNIAENKRMLDSTLEVAREWEKRLYALPDRNADGRISRPEFDDYMARYKRMHTELRDPDLPRWEEMDTDRTGFITFQEWLDYMDRIRRQRAAMDAYGY
Sbjct:    1 MSTALRTLGAALGVALFRRLIWRPWGERRRKKKLQKILKAGVRAIEKDPDILNLQLNIAENKRMLDSTLEVAREWEKRLYALPDRNADGRISRPEFDDYMARYKRMHTELRDPDLPRWEEMDTDRTGFITFQEWLDYMDRIRRQRAAMDAYGY 153

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BLAST of jgi.p|Trimin1|167652 vs. uniprot
Match: A0A835Z5A9_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5A9_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 5.820e-13
Identity = 34/82 (41.46%), Postives = 48/82 (58.54%), Query Frame = 0

Query:   58 IAENKRMLDSTLEVAREWEKRLYALPDRNADGRISRPEFDDYMARYKRMHTELRDPDLPRWEEMDTDRTGFITFQEWLDYMD 139
            I + +  L+   +  R WE  L+ LPD + D  I+  EF  YM  YK++H EL D DLP + +MD +R G ITF+EW  + D
Sbjct:   97 IQQEQARLEILHDNIRMWETALFTLPDDDGDKLITPNEFSTYMTSYKKLHPELLDSDLPTFRDMDFNRNGQITFEEWAKFQD 178

[Close]

BLAST of jgi.p|Trimin1|167652 vs. uniprot
Match: A0A836CPR7_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPR7_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 9.370e-11
Identity = 37/107 (34.58%), Postives = 61/107 (57.01%), Query Frame = 0

Query:   40 AGVRAIEKDPDILNLQLNIAENKRMLDSTLEVAREWEKRLYALPDRNADGRISRPEFDDYMARYKRMHTELRDPDLPRWEEMDTDRTGFITFQEWLDYMDRIRRQRA 146
            A + A+ +D ++   +L  A     +D +   A E +   +  PD N D RISR EF+ Y+A Y R +  LR  D+P++E+ D+ R G + F+EW  Y++R R++ A
Sbjct:  116 ANLEALVEDAELRIEELQQAAVDAGMDISATQA-EVDYEEFKQPDANHDNRISRAEFNAYIADYLRQYPHLRREDMPKFEDFDSSRDGSVNFKEWQMYLERQRKEDA 221

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|167652 vs. uniprot

BLAST of jgi.p|Trimin1|167652 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A835YSS0_9STRA	6.030e-107	100.00	EF-hand domain-containing protein n=1 Tax=Tribonem...	[more]
A0A835Z5A9_9STRA	5.820e-13	41.46	EF-hand domain-containing protein n=1 Tax=Tribonem...	[more]
A0A836CPR7_9STRA	9.370e-11	34.58	EF-hand domain-containing protein n=1 Tax=Tribonem...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.238.10		coord: 8..149 e-value: 3.8E-11 score: 45.2
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 122..134
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 84..96
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 118..144 score: 9.771187
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 67..138

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_52	contig	Contig_52:111234..114056 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|167652	mRNA_9916	Tribonema minus UTEX_B_3156	mRNA	Contig_52 111234..114056 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|167652|e_gw1.52.74.1 ID=Trimin1|167652|e_gw1.52.74.1|Name=jgi.p|Trimin1|167652|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=154bp
MSTALRTLGAALGVALFRRLIWRPWGERRRKKKLQKILKAGVRAIEKDPD
ILNLQLNIAENKRMLDSTLEVAREWEKRLYALPDRNADGRISRPEFDDYM
ARYKRMHTELRDPDLPRWEEMDTDRTGFITFQEWLDYMDRIRRQRAAMDA
YGY*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair