mRNA_2462 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|158344
Unique Name	mRNA_2462
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|158344 vs. uniprot
Match: A0A835YQX3_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQX3_9STRA)

HSP 1 Score: 392 bits (1008), Expect = 4.980e-138
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1

Query:    1 MGAAWVRCGGGARLDVLRQAARGLAALHARRICHRDIKSHNVVIALRSGGSGGXXSGDGSAWVAKIADLGSAAVLDGSGRVTGEVGTSGWSAPEVFSGGPYGAACDVFSCGVMVWEAAGAWGVPDNPLCGVTEEEYVLELAGGARPPVQARNCYGLSADAYGALLRRTWAQDPAARPTAAELERELAELVRGLRGAGRGG 600
            MGAAWVRCGGGARLDVLRQAARGLAALHARRICHRDIKSHNVVIALRSGGSGGXXSGDGSAWVAKIADLGSAAVLDGSGRVTGEVGTSGWSAPEVFSGGPYGAACDVFSCGVMVWEAAGAWGVPDNPLCGVTEEEYVLELAGGARPPVQARNCYGLSADAYGALLRRTWAQDPAARPTAAELERELAELVRGLRGAGRGG
Sbjct:    1 MGAAWVRCGGGARLDVLRQAARGLAALHARRICHRDIKSHNVVIALRSGGSGGXXSGDGSAWVAKIADLGSAAVLDGSGRVTGEVGTSGWSAPEVFSGGPYGAACDVFSCGVMVWEAAGAWGVPDNPLCGVTEEEYVLELAGGARPPVQARNCYGLSADAYGALLRRTWAQDPAARPTAAELERELAELVRGLRGAGRGG 200

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BLAST of jgi.p|Trimin1|158344 vs. uniprot
Match: D7G881_ECTSI (Amino acid-binding ACT n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G881_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 1.960e-24
Identity = 80/197 (40.61%), Postives = 105/197 (53.30%), Query Frame = 1

Query:   37 RLDVLRQAARGLAALHARRICHRDIKSHNVVIALRS----GGSG-----GXXSG------------DGSAWVAKIADLGSAAV--LDGSGRVTGEVGTSGWSAPEVFSGGPYGAACDVFSCGVMVWEAAGAWGVPDNPLCGVTEEEYVLELAGGARPPVQARNCYGLSADAYGALLRRTWAQDPAARPTAAELEREL 558
            R  ++ +AA GLAALH   I HRD+KSHNV++  +     GG+      G   G            D S W AK+ DLGSAA+  L+G   +T E+GTSGW+APEV  G  YG   DVFS GV++W+A    G  +NP+CG + ++    L G  RP         + +D    L  R WA DP ARPTA  +  EL
Sbjct:  442 RARLVSEAADGLAALHHAGIVHRDVKSHNVLVVRQRQTAFGGAEPVVVRGREHGESDHNCTFLEGIDESGWEAKLGDLGSAALIPLEGQAALTEEIGTSGWTAPEVCEGRGYGTPADVFSLGVLIWDAF-VCGALENPMCGRSGDQ----LTGRLRPRWPQAPFPVVPSD-IERLAERCWAPDPEARPTAGAVAAEL 632

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BLAST of jgi.p|Trimin1|158344 vs. uniprot
Match: A0A6H5JG30_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG30_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 4.300e-24
Identity = 79/198 (39.90%), Postives = 106/198 (53.54%), Query Frame = 1

Query:   37 RLDVLRQAARGLAALHARRICHRDIKSHNVVIA----LRSGGSG-----GXXSG------------DGSAWVAKIADLGSAAV--LDGSGRVTGEVGTSGWSAPEVFSGGPYGAACDVFSCGVMVWEAAGAWGVPDNPLCGVTEEEYVLELAGG-ARPPVQARNCYGLSADAYGALLRRTWAQDPAARPTAAELEREL 558
            R  ++ +AA GLAALH   I HRD+KSHNV++     +  GG+      G   G            D S W AK+ DLGSAA+  L G   +T E+GTSGW+APEV  G  YG   DVFS GV++W+A    G  +NP+CG + ++   EL     +PP+       + +D    L  R W  DP ARPTA+ +  EL
Sbjct: 1078 RARLVAEAAEGLAALHNAGIVHRDVKSHNVLVVRQRRMAFGGAEPVGVRGCEHGERDQSCTFVDGIDESGWEAKLGDLGSAALIPLKGQAALTEEIGTSGWTAPEVCEGRGYGTPADVFSLGVLIWDAF-VCGALENPMCGRSGDQLTGELRPRWPQPPLPV-----VPSD-IERLAERCWVPDPEARPTASAVAAEL 1268

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BLAST of jgi.p|Trimin1|158344 vs. uniprot
Match: A0A2D4BEL8_PYTIN (TKL protein kinase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BEL8_PYTIN)

HSP 1 Score: 100 bits (250), Expect = 3.630e-21
Identity = 72/180 (40.00%), Postives = 98/180 (54.44%), Query Frame = 1

Query:   37 RLDVLRQAARGLAALHARRICHRDIKSHNVVIALRSGGSGGXXSGDGSAWVAKIADLGSAAVLDGSG-RVTGEVGTSGWSAPEVFSGGPYGAACDVFSCGVMVWEAAGAWGVPDNPLCGVTEEEYVLELAGGARPPVQARNCYGLSADAYGALLRRTWAQDPAARPTAAELERELAELVR 573
            +L +  Q A+GLAALHA  + HRD+K HNV++A          S +G+  VAKI DLGSAAV      RV  E+G+SG++APEVF    Y A  DV+S GV++WE         NP  G   ++ +  +  G RP     +C    A    ALL+  W  DP+ RPTA E+ + L  + R
Sbjct:  830 KLSIATQLAKGLAALHAAHVVHRDVKPHNVMLAR-------LHSHNGANVVAKIGDLGSAAVCASPDVRVFEEIGSSGYTAPEVFQPSGYDARADVWSLGVVLWELL-VDSRERNPFVGRAGDDVLRLVHEGVRP-----SCADAPAPLV-ALLQACWLVDPSQRPTAHEVAQALQAIAR 995

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BLAST of jgi.p|Trimin1|158344 vs. uniprot
Match: A0A1V9ZGJ6_9STRA (Kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZGJ6_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 8.280e-19
Identity = 59/173 (34.10%), Postives = 92/173 (53.18%), Query Frame = 1

Query:   55 QAARGLAALHARRICHRDIKSHNVVIALRSGGSGGXXSGDGSAWVAKIADLGSAAVLDGSGRVTGEVGTSGWSAPEVFSGGPYGAACDVFSCGVMVWEAAGAWGVPD-NPLCGVTEEEYVLELAGGARPPVQARNCYGLSADAYGALLRRTWAQDPAARPTAAELERELAELV 570
            Q A  LA +H   + HRDIK HN++++              SA +AK+ D GSA +L   G++   VGTSG++APEVF+G  Y    D++S G+++WE    +  P  NP  G+  + ++ ++  G RP + +      S   Y  L+   W   P+ RPTAA++   LA L+
Sbjct:  469 QIACALAYIHEINVLHRDIKLHNILLSET-------FKATHSAPIAKLCDFGSAILLR-DGKINEPVGTSGYTAPEVFTGDGYSLPSDIWSFGILLWEILSPYPNPHPNPFTGIANDVFLHKVTNGERPHLDS------SISLYTRLIEECWRLIPSERPTAADIVATLARLL 627

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BLAST of jgi.p|Trimin1|158344 vs. uniprot
Match: G4Z7M8_PHYSP (Protein kinase domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z7M8_PHYSP)

HSP 1 Score: 90.9 bits (224), Expect = 6.670e-18
Identity = 64/174 (36.78%), Postives = 96/174 (55.17%), Query Frame = 1

Query:   61 ARGLAALHARRICHRDIKSHNVVIALRSGGSGGXXSGDGSAWVAKIADLGSAAVLDGSGRV-TGEVGTSGWSAPEVFSGGPYGAACDVFSCGVMVWEAAGAWGVPD--NPLCGVTEEEYVLELAGGARPPV-QARNCYGLSADAYGALLRRTWAQDPAARPTAAELERELAELV 570
            ARG+A LH   + HRDIKSHN++I      SG       S    KI DLGSA V      +   EVG+SG++APE+F+   Y +  DV+S G+++WE A    V D  NP  G+  +E+V +  GG RP +  A   +      +G ++++ W  DP+ RP   E+ ++L +L+
Sbjct:  279 ARGIAWLHKHDMIHRDIKSHNIII------SGDLTRPSPSV---KIGDLGSAIVRQQQEPLLVEEVGSSGYTAPEIFTRHGYDSKVDVWSFGIVLWELASCC-VQDRLNPFMGMAGDEFVTKAQGGCRPKLAHAHQVW------FGPIVKKCWRFDPSQRPDMDEVVKQLEKLI 436

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BLAST of jgi.p|Trimin1|158344 vs. uniprot
Match: A0A067CQ63_SAPPC (TKL protein kinase n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CQ63_SAPPC)

HSP 1 Score: 91.3 bits (225), Expect = 7.190e-18
Identity = 61/173 (35.26%), Postives = 88/173 (50.87%), Query Frame = 1

Query:   55 QAARGLAALHARRICHRDIKSHNVVIALRSGGSGGXXSGDGSAWVAKIADLGSAAVLDGSGRVTGEVGTSGWSAPEVFSGGPYGAACDVFSCGVMVWEAAGAWGVP-DNPLCGVTEEEYVLELAGGARPPVQARNCYGLSADAYGALLRRTWAQDPAARPTAAELERELAELV 570
            Q A  LA LH  RI HRD+K HNV++      S            AK+ D GSA  L G+ + T  +GTSG++APEVFSG  Y    D++S G+ +WE    +  P  NP  GV  ++++ +   G RP + +      +   YG ++   W   P+ RP A  L   LA+L+
Sbjct:  482 QVACALAYLHEERIVHRDLKLHNVLLVAPIEDSTSVPE-------AKLCDFGSAIRL-GASKATDAMGTSGYTAPEVFSGDGYTYPSDIWSFGIFLWELFCPYPNPHSNPFAGVAPDDFIAKATHGLRPHLPS------TLGGYGHVIEECWRLIPSERPAATSLIATLADLL 640

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BLAST of jgi.p|Trimin1|158344 vs. uniprot
Match: A0A1V9ZLY4_9STRA (Protein kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZLY4_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.340e-17
Identity = 64/173 (36.99%), Postives = 89/173 (51.45%), Query Frame = 1

Query:   55 QAARGLAALHARRICHRDIKSHNVVIALRSGGSGGXXSGDGSAWVAKIADLGSAAVLDGSGRVTGEVGTSGWSAPEVFSGGPYGAACDVFSCGVMVWEAAGAW-GVPDNPLCGVTEEEYVLELAGGARPPVQARNCYGLSADAYGALLRRTWAQDPAARPTAAELERELAELV 570
            Q A  LA LH ++I HRD+K HNV+++            + S   AK+ D GSA VL G  ++T   GTSG++APEV +G  Y    DV+S G+ +WE           P  G+  + +V +   G RP +    C G    AYG L+   W   P+ RP AAEL   LA+L+
Sbjct:  408 QIACALAYLHQKKILHRDLKLHNVLLS-------DALDDNTSIPQAKLCDFGSA-VLMGDAKITEASGTSGYTAPEVLTGDGYSYPSDVWSFGIFLWEILSPHPNXXXXPFVGIGPDAFVDKATRGIRPHLHP--CLG----AYGRLIEECWRLIPSERPVAAELVPSLAQLL 566

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BLAST of jgi.p|Trimin1|158344 vs. uniprot
Match: T0QFV0_SAPDV (TKL protein kinase n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QFV0_SAPDV)

HSP 1 Score: 88.2 bits (217), Expect = 8.400e-17
Identity = 60/173 (34.68%), Postives = 87/173 (50.29%), Query Frame = 1

Query:   55 QAARGLAALHARRICHRDIKSHNVVIALRSGGSGGXXSGDGSAWVAKIADLGSAAVLDGSGRVTGEVGTSGWSAPEVFSGGPYGAACDVFSCGVMVWEAAGAWGVP-DNPLCGVTEEEYVLELAGGARPPVQARNCYGLSADAYGALLRRTWAQDPAARPTAAELERELAELV 570
            Q A  LA LH  +I HRD+K HNV++      S            AK+ D GSA  L G  + T  VGTSG++APEVF+G  Y    D++S G+ +WE    +  P  NP  G+  +++V +   G RP +        +   YG ++   W   P+ RP+A  L   LA+L+
Sbjct:  486 QVACALAYLHKEQILHRDLKLHNVLLVAPIQDSASVPE-------AKLCDFGSAIRL-GVSKATDAVGTSGYTAPEVFTGDGYTYPSDIWSFGIFLWELFCPYPNPHSNPFVGLAPDDFVAKATHGLRPHLPT------TLGGYGHVVEECWRLIPSERPSATSLVTTLADLL 644

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BLAST of jgi.p|Trimin1|158344 vs. uniprot
Match: A0A485KQU6_9STRA (Aste57867_10617 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQU6_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.170e-16
Identity = 61/173 (35.26%), Postives = 87/173 (50.29%), Query Frame = 1

Query:   55 QAARGLAALHARRICHRDIKSHNVVIALRSGGSGGXXSGDGSAWVAKIADLGSAAVLDGSG-RVTGEVGTSGWSAPEVFSGGPYGAACDVFSCGVMVWEAAGAWGVPDNPLCGVTEEEYVLELAGGARPPVQARNCYGLSADAYGALLRRTWAQDPAARPTAAELERELAELV 570
            Q A  +A LH   I HRDIKSHNVV+A       G  +   +   AK+ DLGSA V+     +   E+GT+G+ APEV SG  Y    D++S G+ +WE         NP  G+T + ++ ++  G RP +         +  +  LL   W   P+ RPTAA L  EL + +
Sbjct:  561 QIACAVAYLHENNILHRDIKSHNVVLA-------GLSASPSAIPTAKLCDLGSAIVITSEDEKPVDEIGTTGYIAPEVASGQGYSFPSDIWSFGMFLWELFSPASTL-NPYAGLTSDAFIDKVTDGYRPSMA-------DSTPFATLLDECWRLIPSERPTAAALVAELTQAI 718

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|158344 vs. uniprot

BLAST of jgi.p|Trimin1|158344 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YQX3_9STRA	4.980e-138	100.00	Kinase-like domain-containing protein n=1 Tax=Trib...	[more]
D7G881_ECTSI	1.960e-24	40.61	Amino acid-binding ACT n=1 Tax=Ectocarpus siliculo...	[more]
A0A6H5JG30_9PHAE	4.300e-24	39.90	Protein kinase domain-containing protein n=1 Tax=E...	[more]
A0A2D4BEL8_PYTIN	3.630e-21	40.00	TKL protein kinase n=1 Tax=Pythium insidiosum TaxI...	[more]
A0A1V9ZGJ6_9STRA	8.280e-19	34.10	Kinase n=1 Tax=Thraustotheca clavata TaxID=74557 R...	[more]
G4Z7M8_PHYSP	6.670e-18	36.78	Protein kinase domain-containing protein n=1 Tax=P...	[more]
A0A067CQ63_SAPPC	7.190e-18	35.26	TKL protein kinase n=1 Tax=Saprolegnia parasitica ...	[more]
A0A1V9ZLY4_9STRA	2.340e-17	36.99	Protein kinase n=1 Tax=Achlya hypogyna TaxID=12027...	[more]
T0QFV0_SAPDV	8.400e-17	34.68	TKL protein kinase n=1 Tax=Saprolegnia diclina (st...	[more]
A0A485KQU6_9STRA	1.170e-16	35.26	Aste57867_10617 protein n=1 Tax=Aphanomyces stella...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_5	contig	Contig_5:1765872..1766474 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|158344\|e_gw1.5.199.1
BRITE	ko00000,ko00001,ko01000,ko01001,ko01002,ko01009,ko01020,ko03012,ko03029,ko04050,ko04147,ko04516
KEGG Pathway	ko04010,ko04014,ko04080,ko04151,ko04210,ko04610,ko04722,ko04750,ko05034,ko05150,ko05164,ko05200,ko05202,ko05216,ko05230,map04010,map04014,map04080,map04151,map04210,map04610,map04722,map04750,map05034,map05150,map05164,map05200,map05202,map05216,map05230
KEGG ko	ko:K01315,ko:K02355,ko:K03176,ko:K04360,ko:K05101,ko:K05122,ko:K05123,ko:K05127,ko:K05129,ko:K08252,ko:K08899,ko:K16353
EC	2.7.10.1,3.4.21.7
GOs	GO:0000003,GO:0000139,GO:0000165,GO:0000186,GO:0000187,GO:0000902,GO:0000904,GO:0001101,GO:0001501,GO:0001502,GO:0001505,GO:0001558,GO:0001568,GO:0001570,GO:0001654,GO:0001664,GO:0001708,GO:0001725,GO:0001736,GO:0001738,GO:0001745,GO:0001751,GO:0001754,GO:0001756,GO:0001764,GO:0001775,GO:0001838,GO:0001841,GO:0001843,GO:0001932,GO:0001933,GO:0001934,GO:0001941,GO:0001944,GO:0002009,GO:0002039,GO:0002064,GO:0002088,GO:0002165,GO:0002376,GO:0002520,GO:0002521,GO:0002682,GO:0002684,GO:0002761,GO:0002763,GO:0003002,GO:0003006,GO:0003008,GO:0003205,GO:0003231,GO:0003279,GO:0003281,GO:0003401,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004675,GO:0004713,GO:0004714,GO:0004888,GO:0005003,GO:0005004,GO:0005030,GO:0005102,GO:0005109,GO:0005126,GO:0005165,GO:0005166,GO:0005215,GO:0005244,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005770,GO:0005783,GO:0005791,GO:0005794,GO:0005829,GO:0005856,GO:0005874,GO:0005886,GO:0005887,GO:0005911,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006865,GO:0006928,GO:0006935,GO:0006950,GO:0006952,GO:0006954,GO:0006996,GO:0007010,GO:0007154,GO:0007155,GO:0007163,GO:0007164,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007178,GO:0007202,GO:0007223,GO:0007224,GO:0007254,GO:0007267,GO:0007275,GO:0007389,GO:0007399,GO:0007405,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007422,GO:0007423,GO:0007444,GO:0007483,GO:0007484,GO:0007485,GO:0007486,GO:0007507,GO:0007528,GO:0007548,GO:0007552,GO:0007560,GO:0007568,GO:0007600,GO:0007605,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007616,GO:0007623,GO:0007631,GO:0007635,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008283,GO:0008284,GO:0008285,GO:0008356,GO:0008361,GO:0008406,GO:0008582,GO:0008584,GO:0009266,GO:0009314,GO:0009415,GO:0009416,GO:0009581,GO:0009582,GO:0009605,GO:0009611,GO:0009612,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009791,GO:0009792,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009897,GO:0009952,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0009991,GO:0010001,GO:0010033,GO:0010035,GO:0010243,GO:0010465,GO:0010468,GO:0010517,GO:0010518,GO:0010556,GO:0010557,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010623,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010720,GO:0010721,GO:0010769,GO:0010770,GO:0010863,GO:0010941,GO:0010942,GO:0010975,GO:0010976,GO:0010996,GO:0012501,GO:0012505,GO:0012506,GO:0014002,GO:0014013,GO:0014014,GO:0014020,GO:0014047,GO:0014066,GO:0014068,GO:0014069,GO:0014070,GO:0014823,GO:0014850,GO:0015026,GO:0015075,GO:0015267,GO:0015629,GO:0015630,GO:0015711,GO:0015800,GO:0015849,GO:0016020,GO:0016021,GO:0016032,GO:0016043,GO:0016048,GO:0016049,GO:0016055,GO:0016301,GO:0016310,GO:0016331,GO:0016477,GO:0016740,GO:0016772,GO:0016773,GO:0017145,GO:0017147,GO:0018108,GO:0018193,GO:0018212,GO:0019048,GO:0019054,GO:0019056,GO:0019199,GO:0019219,GO:0019220,GO:0019222,GO:0019233,GO:0019538,GO:0019722,GO:0019725,GO:0019838,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0019932,GO:0021537,GO:0021543,GO:0021545,GO:0021553,GO:0021675,GO:0021782,GO:0021915,GO:0021953,GO:0021954,GO:0021987,GO:0022008,GO:0022414,GO:0022603,GO:0022604,GO:0022610,GO:0022803,GO:0022832,GO:0022836,GO:0022839,GO:0022857,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030010,GO:0030029,GO:0030030,GO:0030036,GO:0030054,GO:0030097,GO:0030098,GO:0030111,GO:0030135,GO:0030136,GO:0030139,GO:0030154,GO:0030165,GO:0030177,GO:0030178,GO:0030182,GO:0030183,GO:0030215,GO:0030307,GO:0030323,GO:0030324,GO:0030326,GO:0030334,GO:0030335,GO:0030424,GO:0030425,GO:0030426,GO:0030427,GO:0030509,GO:0030516,GO:0030538,GO:0030539,GO:0030540,GO:0030659,GO:0030662,GO:0030665,GO:0030666,GO:0030669,GO:0030855,GO:0030859,GO:0030900,GO:0030971,GO:0031090,GO:0031098,GO:0031175,GO:0031224,GO:0031226,GO:0031290,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031344,GO:0031346,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031435,GO:0031532,GO:0031547,GO:0031594,GO:0031667,GO:0031960,GO:0031982,GO:0031984,GO:0032101,GO:0032103,GO:0032147,GO:0032148,GO:0032222,GO:0032224,GO:0032268,GO:0032269,GO:0032270,GO:0032279,GO:0032432,GO:0032501,GO:0032502,GO:0032526,GO:0032535,GO:0032809,GO:0032872,GO:0032874,GO:0032879,GO:0032880,GO:0032940,GO:0032956,GO:0032970,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033135,GO:0033138,GO:0033143,GO:0033145,GO:0033267,GO:0033554,GO:0033555,GO:0033674,GO:0033993,GO:0034097,GO:0034220,GO:0034612,GO:0034613,GO:0035088,GO:0035089,GO:0035094,GO:0035107,GO:0035108,GO:0035112,GO:0035113,GO:0035126,GO:0035148,GO:0035215,GO:0035239,GO:0035260,GO:0035282,GO:0035295,GO:0035556,GO:0035567,GO:0035584,GO:0035690,GO:0035821,GO:0036211,GO:0036445,GO:0036477,GO:0038023,GO:0038083,GO:0038179,GO:0038180,GO:0039656,GO:0040007,GO:0040008,GO:0040011,GO:0040012,GO:0040017,GO:0042051,GO:0042052,GO:0042060,GO:0042063,GO:0042113,GO:0042127,GO:0042221,GO:0042325,GO:0042326,GO:0042327,GO:0042330,GO:0042461,GO:0042462,GO:0042471,GO:0042472,GO:0042490,GO:0042493,GO:0042592,GO:0042641,GO:0042733,GO:0042802,GO:0042803,GO:0042813,GO:0042981,GO:0042995,GO:0043005,GO:0043009,GO:0043010,GO:0043025,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043087,GO:0043113,GO:0043121,GO:0043122,GO:0043123,GO:0043170,GO:0043195,GO:0043197,GO:0043200,GO:0043204,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043235,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043506,GO:0043507,GO:0043523,GO:0043524,GO:0043525,GO:0043547,GO:0043549,GO:0043583,GO:0043679,GO:0044003,GO:0044068,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044297,GO:0044298,GO:0044306,GO:0044309,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044431,GO:0044433,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045137,GO:0045165,GO:0045196,GO:0045197,GO:0045198,GO:0045200,GO:0045202,GO:0045211,GO:0045321,GO:0045334,GO:0045471,GO:0045595,GO:0045596,GO:0045597,GO:0045637,GO:0045639,GO:0045649,GO:0045651,GO:0045664,GO:0045666,GO:0045685,GO:0045686,GO:0045765,GO:0045766,GO:0045773,GO:0045859,GO:0045860,GO:0045887,GO:0045893,GO:0045927,GO:0045935,GO:0045936,GO:0045937,GO:0045995,GO:0046328,GO:0046330,GO:0046530,GO:0046546,GO:0046548,GO:0046578,GO:0046579,GO:0046649,GO:0046660,GO:0046661,GO:0046677,GO:0046716,GO:0046717,GO:0046777,GO:0046903,GO:0046928,GO:0046942,GO:0046982,GO:0046983,GO:0048011,GO:0048013,GO:0048015,GO:0048017,GO:0048103,GO:0048167,GO:0048265,GO:0048266,GO:0048403,GO:0048406,GO:0048468,GO:0048483,GO:0048485,GO:0048511,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048545,GO:0048562,GO:0048563,GO:0048568,GO:0048569,GO:0048583,GO:0048584,GO:0048585,GO:0048588,GO:0048589,GO:0048592,GO:0048598,GO:0048608,GO:0048638,GO:0048639,GO:0048646,GO:0048663,GO:0048665,GO:0048666,GO:0048667,GO:0048668,GO:0048670,GO:0048672,GO:0048678,GO:0048679,GO:0048680,GO:0048686,GO:0048687,GO:0048690,GO:0048691,GO:0048699,GO:0048705,GO:0048707,GO:0048708,GO:0048709,GO:0048710,GO:0048712,GO:0048729,GO:0048731,GO:0048736,GO:0048749,GO:0048786,GO:0048803,GO:0048804,GO:0048805,GO:0048806,GO:0048807,GO:0048808,GO:0048812,GO:0048839,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0048934,GO:0048935,GO:0050730,GO:0050731,GO:0050767,GO:0050768,GO:0050769,GO:0050770,GO:0050772,GO:0050773,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050803,GO:0050804,GO:0050806,GO:0050807,GO:0050808,GO:0050839,GO:0050877,GO:0050890,GO:0050896,GO:0050900,GO:0050906,GO:0050920,GO:0050921,GO:0050926,GO:0050927,GO:0050951,GO:0050954,GO:0050961,GO:0050965,GO:0050966,GO:0050974,GO:0050982,GO:0051046,GO:0051049,GO:0051056,GO:0051057,GO:0051090,GO:0051091,GO:0051092,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051216,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051254,GO:0051270,GO:0051272,GO:0051301,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051384,GO:0051385,GO:0051403,GO:0051412,GO:0051493,GO:0051495,GO:0051588,GO:0051599,GO:0051602,GO:0051606,GO:0051641,GO:0051668,GO:0051674,GO:0051701,GO:0051704,GO:0051716,GO:0051817,GO:0051896,GO:0051960,GO:0051961,GO:0051962,GO:0051963,GO:0051965,GO:0051966,GO:0051968,GO:0052026,GO:0052312,GO:0055057,GO:0055059,GO:0055085,GO:0060008,GO:0060009,GO:0060026,GO:0060041,GO:0060070,GO:0060071,GO:0060076,GO:0060089,GO:0060173,GO:0060175,GO:0060191,GO:0060193,GO:0060249,GO:0060255,GO:0060284,GO:0060291,GO:0060322,GO:0060341,GO:0060384,GO:0060385,GO:0060395,GO:0060429,GO:0060484,GO:0060485,GO:0060541,GO:0060548,GO:0060560,GO:0060562,GO:0060606,GO:0060828,GO:0060976,GO:0061024,GO:0061053,GO:0061097,GO:0061098,GO:0061162,GO:0061245,GO:0061339,GO:0061351,GO:0061366,GO:0061368,GO:0061387,GO:0061448,GO:0061458,GO:0061564,GO:0065007,GO:0065008,GO:0065009,GO:0070302,GO:0070304,GO:0070306,GO:0070372,GO:0070374,GO:0070570,GO:0070572,GO:0070727,GO:0070848,GO:0070887,GO:0071229,GO:0071230,GO:0071300,GO:0071310,GO:0071316,GO:0071340,GO:0071345,GO:0071356,GO:0071363,GO:0071396,GO:0071417,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071772,GO:0071773,GO:0071840,GO:0071900,GO:0071902,GO:0071936,GO:0071944,GO:0072089,GO:0072175,GO:0072358,GO:0072359,GO:0072499,GO:0072657,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0090090,GO:0090102,GO:0090103,GO:0090162,GO:0090175,GO:0090178,GO:0090179,GO:0090263,GO:0090596,GO:0090598,GO:0090630,GO:0097060,GO:0097237,GO:0097305,GO:0097447,GO:0097458,GO:0097485,GO:0097517,GO:0097529,GO:0097708,GO:0098552,GO:0098588,GO:0098590,GO:0098722,GO:0098743,GO:0098791,GO:0098793,GO:0098794,GO:0098805,GO:0098984,GO:0099080,GO:0099081,GO:0099173,GO:0099175,GO:0099177,GO:0099512,GO:0099513,GO:0099536,GO:0099537,GO:0099538,GO:0099540,GO:0099550,GO:0099551,GO:0099572,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0140096,GO:0150034,GO:0198738,GO:1900019,GO:1900020,GO:1900274,GO:1901214,GO:1901215,GO:1901216,GO:1901342,GO:1901564,GO:1901626,GO:1901628,GO:1901654,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902105,GO:1902107,GO:1902531,GO:1902533,GO:1902680,GO:1903034,GO:1903036,GO:1903506,GO:1903508,GO:1903530,GO:1903706,GO:1903708,GO:1903827,GO:1903829,GO:1903859,GO:1903909,GO:1903911,GO:1903995,GO:1903997,GO:1904018,GO:1904393,GO:1904395,GO:1904396,GO:1904398,GO:1904929,GO:1905114,GO:1905276,GO:1905330,GO:1905475,GO:1905477,GO:1905517,GO:1990089,GO:1990090,GO:1990416,GO:1990782,GO:2000026,GO:2000027,GO:2000112,GO:2000145,GO:2000147,GO:2000209,GO:2000249,GO:2000251,GO:2000322,GO:2000324,GO:2000539,GO:2000541,GO:2000811,GO:2001141
Preferred name	ROR1
Description	transmembrane receptor protein tyrosine kinase activity
COG category	KLT
Max annot lvl	2759\|Eukaryota
EggNOG OGs	COG0515@1\|root,KOG1026@2759\|Eukaryota
Evalue	3.21e-25
Seed ortholog	2880.D7G881
Hectar predicted targeting category	mitochondrion
Ec32 ortholog description	Amino acid-binding ACT
Ec32 ortholog	Ec-12_001120.1
TranscriptId	158666
Track	FilteredModels1
ProteinId	158344

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|158344	gene_2462	Tribonema minus UTEX_B_3156	gene	Contig_5 1765872..1766474 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_2462_1	exon_2462_1	Tribonema minus UTEX_B_3156	exon	Contig_5 1765872..1766474 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_2462	CDS_2462	Tribonema minus UTEX_B_3156	CDS	Contig_5 1765872..1766474 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|158344	Trimin1\|158344\|e_gw1.5.199.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_5 1765872..1766474 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_5:1765872..1766474-
coding sequence from alignment at Contig_5:1765872..1766474-

spliced messenger RNA

>mRNA_2462 ID=mRNA_2462|Name=jgi.p|Trimin1|158344|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=603bp|location=Sequence derived from alignment at Contig_5:1765872..1766474- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCGCAGCGTGGGTGCGCTGCGGCGGCGGCGCGCGCCTCGACGTGCT
GCGCCAGGCGGCGCGCGGCCTCGCGGCGCTGCACGCGCGGCGCATCTGTC
ACCGTGACATCAAGTCTCACAACGTGGTGATCGCGCTGCGCAGCGGCGGC
AGCGGCGGCGGCGGCAGCGGCGACGGCAGCGCGTGGGTCGCCAAGATCGC
GGACCTCGGCTCCGCGGCGGTGCTCGACGGCAGCGGACGCGTGACGGGGG
AGGTGGGAACATCGGGATGGTCTGCGCCGGAGGTGTTCAGCGGCGGGCCG
TACGGCGCCGCGTGCGACGTCTTCAGCTGCGGCGTGATGGTGTGGGAGGC
GGCGGGCGCGTGGGGCGTCCCCGACAACCCCCTGTGCGGCGTGACGGAGG
AGGAGTACGTGCTGGAGCTCGCCGGCGGCGCGAGGCCGCCCGTGCAGGCG
CGCAACTGCTACGGGCTGAGCGCTGACGCCTACGGGGCGCTGCTGCGGCG
CACGTGGGCGCAGGACCCTGCGGCGCGGCCCACCGCCGCGGAGCTGGAGC
GGGAGCTGGCGGAGCTCGTGAGGGGGCTGAGGGGTGCGGGGAGAGGGGGC
TGA

protein sequence of jgi.p|Trimin1|158344

>Trimin1|158344|e_gw1.5.199.1 ID=Trimin1|158344|e_gw1.5.199.1|Name=jgi.p|Trimin1|158344|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=201bp
MGAAWVRCGGGARLDVLRQAARGLAALHARRICHRDIKSHNVVIALRSGG
SGGGGSGDGSAWVAKIADLGSAAVLDGSGRVTGEVGTSGWSAPEVFSGGP
YGAACDVFSCGVMVWEAAGAWGVPDNPLCGVTEEEYVLELAGGARPPVQA
RNCYGLSADAYGALLRRTWAQDPAARPTAAELERELAELVRGLRGAGRGG
*

mRNA from alignment at Contig_5:1765872..1766474-

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_2462 ID=mRNA_2462|Name=jgi.p|Trimin1|158344|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=603bp|location=Sequence derived from alignment at Contig_5:1765872..1766474- (Tribonema minus UTEX_B_3156 )
ATGGGCGCAGCGTGGGTGCGCTGCGGCGGCGGCGCGCGCCTCGACGTGCT
GCGCCAGGCGGCGCGCGGCCTCGCGGCGCTGCACGCGCGGCGCATCTGTC
ACCGTGACATCAAGTCTCACAACGTGGTGATCGCGCTGCGCAGCGGCGGC
AGCGGCGGCGGCGGCAGCGGCGACGGCAGCGCGTGGGTCGCCAAGATCGC
GGACCTCGGCTCCGCGGCGGTGCTCGACGGCAGCGGACGCGTGACGGGGG
AGGTGGGAACATCGGGATGGTCTGCGCCGGAGGTGTTCAGCGGCGGGCCG
TACGGCGCCGCGTGCGACGTCTTCAGCTGCGGCGTGATGGTGTGGGAGGC
GGCGGGCGCGTGGGGCGTCCCCGACAACCCCCTGTGCGGCGTGACGGAGG
AGGAGTACGTGCTGGAGCTCGCCGGCGGCGCGAGGCCGCCCGTGCAGGCG
CGCAACTGCTACGGGCTGAGCGCTGACGCCTACGGGGCGCTGCTGCGGCG
CACGTGGGCGCAGGACCCTGCGGCGCGGCCCACCGCCGCGGAGCTGGAGC
GGGAGCTGGCGGAGCTCGTGAGGGGGCTGAGGGGTGCGGGGAGAGGGGGC
TGA

Coding sequence (CDS) from alignment at Contig_5:1765872..1766474-

>mRNA_2462 ID=mRNA_2462|Name=jgi.p|Trimin1|158344|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=603bp|location=Sequence derived from alignment at Contig_5:1765872..1766474- (Tribonema minus UTEX_B_3156 )
ATGGGCGCAGCGTGGGTGCGCTGCGGCGGCGGCGCGCGCCTCGACGTGCT
GCGCCAGGCGGCGCGCGGCCTCGCGGCGCTGCACGCGCGGCGCATCTGTC
ACCGTGACATCAAGTCTCACAACGTGGTGATCGCGCTGCGCAGCGGCGGC
AGCGGCGGCGGCGGCAGCGGCGACGGCAGCGCGTGGGTCGCCAAGATCGC
GGACCTCGGCTCCGCGGCGGTGCTCGACGGCAGCGGACGCGTGACGGGGG
AGGTGGGAACATCGGGATGGTCTGCGCCGGAGGTGTTCAGCGGCGGGCCG
TACGGCGCCGCGTGCGACGTCTTCAGCTGCGGCGTGATGGTGTGGGAGGC
GGCGGGCGCGTGGGGCGTCCCCGACAACCCCCTGTGCGGCGTGACGGAGG
AGGAGTACGTGCTGGAGCTCGCCGGCGGCGCGAGGCCGCCCGTGCAGGCG
CGCAACTGCTACGGGCTGAGCGCTGACGCCTACGGGGCGCTGCTGCGGCG
CACGTGGGCGCAGGACCCTGCGGCGCGGCCCACCGCCGCGGAGCTGGAGC
GGGAGCTGGCGGAGCTCGTGAGGGGGCTGAGGGGTGCGGGGAGAGGGGGC
TGA