Trimin1|349794|estExt_Genemark1.C_Ctg_490051 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349794
Unique NameTrimin1|349794|estExt_Genemark1.C_Ctg_490051
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length516
Homology
BLAST of jgi.p|Trimin1|349794 vs. uniprot
Match: A0A836CBZ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBZ3_9STRA)

HSP 1 Score: 1042 bits (2694), Expect = 0.000e+0
Identity = 515/515 (100.00%), Postives = 515/515 (100.00%), Query Frame = 0
Query:    1 MSYSWAQARLILSVLLLLGAHVWAFTPAALTPCQVARNPFSGIAPKRVYGPGSAVRRAAASYSSSPHVYYFNDSDDDDYDEFAGTYCGETYSGRDWMPPLACEDTRNADALTGLSIAVGLPLLVVTAPTFLNSAHLMANDAHRERMRRLKEQEQRPGFATLRVAFFHPEADAAEPSRDAASTPTTCVSDIPVRRRTSKLPGGTWCKTCSDAQYIDGQLRATCARKYGRESRISTVRALPEDEVVNEDGLLVNTTNYGGCTEGGELPGGTWCNSCIDATYVNGELSARCKGQYGRLWDNVRALPSDYVEYDGRRLINRTDYATDDLEVTASVGAAHAAPTVMAALSALAADPALPNNPRLLTRTCAELLRREARWVAVAGGIQQGSEEETDALLQRAVAQERTKWSAEVMTNIQGEEQRAPPPFPAAPVSTYAVVTLLLRWEHTPPGAHRFLQAPLWFGRSRVKDAAEARQLLLWLLSNAHELRLRDVEVLWSPAEAGDVMTEAEAYRKWPELRHG 515
            MSYSWAQARLILSVLLLLGAHVWAFTPAALTPCQVARNPFSGIAPKRVYGPGSAVRRAAASYSSSPHVYYFNDSDDDDYDEFAGTYCGETYSGRDWMPPLACEDTRNADALTGLSIAVGLPLLVVTAPTFLNSAHLMANDAHRERMRRLKEQEQRPGFATLRVAFFHPEADAAEPSRDAASTPTTCVSDIPVRRRTSKLPGGTWCKTCSDAQYIDGQLRATCARKYGRESRISTVRALPEDEVVNEDGLLVNTTNYGGCTEGGELPGGTWCNSCIDATYVNGELSARCKGQYGRLWDNVRALPSDYVEYDGRRLINRTDYATDDLEVTASVGAAHAAPTVMAALSALAADPALPNNPRLLTRTCAELLRREARWVAVAGGIQQGSEEETDALLQRAVAQERTKWSAEVMTNIQGEEQRAPPPFPAAPVSTYAVVTLLLRWEHTPPGAHRFLQAPLWFGRSRVKDAAEARQLLLWLLSNAHELRLRDVEVLWSPAEAGDVMTEAEAYRKWPELRHG
Sbjct:    1 MSYSWAQARLILSVLLLLGAHVWAFTPAALTPCQVARNPFSGIAPKRVYGPGSAVRRAAASYSSSPHVYYFNDSDDDDYDEFAGTYCGETYSGRDWMPPLACEDTRNADALTGLSIAVGLPLLVVTAPTFLNSAHLMANDAHRERMRRLKEQEQRPGFATLRVAFFHPEADAAEPSRDAASTPTTCVSDIPVRRRTSKLPGGTWCKTCSDAQYIDGQLRATCARKYGRESRISTVRALPEDEVVNEDGLLVNTTNYGGCTEGGELPGGTWCNSCIDATYVNGELSARCKGQYGRLWDNVRALPSDYVEYDGRRLINRTDYATDDLEVTASVGAAHAAPTVMAALSALAADPALPNNPRLLTRTCAELLRREARWVAVAGGIQQGSEEETDALLQRAVAQERTKWSAEVMTNIQGEEQRAPPPFPAAPVSTYAVVTLLLRWEHTPPGAHRFLQAPLWFGRSRVKDAAEARQLLLWLLSNAHELRLRDVEVLWSPAEAGDVMTEAEAYRKWPELRHG 515          
BLAST of jgi.p|Trimin1|349794 vs. uniprot
Match: A0A6J4KE34_9CYAN (Uncharacterized protein n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A6J4KE34_9CYAN)

HSP 1 Score: 62.0 bits (149), Expect = 2.330e-7
Identity = 51/156 (32.69%), Postives = 73/156 (46.79%), Query Frame = 0
Query:  359 LLTRTCAELLRREARWVAVAGGIQQ-GSEEETDALLQRAVAQERTKWSAEVMTNIQGE-EQRAPPPFPAAPVSTYAVVTLLLRWEHTPPGAHRFLQAPLWFGRSRVKDAAEARQLLLWLLSNAHELRLRDVEVLWSPAEAGDVMTEAEAYRKWPEL 512
            LL  T + LL     W  V  G Q   S E+ +AL  +   QER+K+SAE +TN+ G   Q+AP   P++  S Y VVTLLL      P  +        +  S ++D  E   LL           L   E+LW+P +  D +TEA+    + +L
Sbjct:   62 LLQETASTLLENADFWTHVLAGSQTVDSREQAEALFNQYSIQERSKFSAETLTNVNGVVSQKAPVATPSSEQSAYVVVTLLLGTADDAPLFNEI------YSTSLLRDVLEEITLL-------RSRFLLVFELLWTPQDVTDSLTEADLASDYADL 204          
BLAST of jgi.p|Trimin1|349794 vs. uniprot
Match: UPI00198BC1EE (DUF1517 domain-containing protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=UPI00198BC1EE)

HSP 1 Score: 55.1 bits (131), Expect = 5.280e-5
Identity = 53/170 (31.18%), Postives = 74/170 (43.53%), Query Frame = 0
Query:  346 ALAADPALPNNP-RLLTRTCAELLRREARWVAVAGGIQQ-GSEEETDALLQRAVAQERTKWSAEVMTNIQGEEQRAPP-PFPAAPVSTYAVVTLLLRWEHTPPGAHRFLQAPLWFGRSRVKDAAEARQLLLWLLSNAHELRLRDVEVLWSPAEAGDVMTEAEAYRKWPEL 512
            AL A+ A P     LL  T + LL     W  V  G Q   S E  +AL  +   QER K+SAE +TN+ G   + PP P  +   + Y VVTLLL      P  +      L   R  ++D    R   L +            E+LW+P +  D +TEA+    + +L
Sbjct:   48 ALRANTATPEGLFELLQETASVLLENVDFWTHVLAGSQTVDSREAGEALFNKFSLQERAKFSAETLTNVNGVVSQQPPLPRGSGDHAAYIVVTLLLGTADDAPLFNEIYSTSLL--RDVLRDITTLRSRFLLVF-----------ELLWTPQDPIDSLTEADLASDYADL 204          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349794 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A836CBZ3_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6J4KE34_9CYAN2.330e-732.69Uncharacterized protein n=3 Tax=Cyanobacteria TaxI... [more]
UPI00198BC1EE5.280e-531.18DUF1517 domain-containing protein n=1 Tax=Verrucom... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010903Protein of unknown function DUF1517PFAMPF07466DUF1517coord: 358..513
e-value: 6.2E-21
score: 75.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_49contigContig_49:520311..526530 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349794mRNA_10470Tribonema minus UTEX_B_3156 mRNAContig_49 520311..527195 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349794|estExt_Genemark1.C_Ctg_490051 ID=Trimin1|349794|estExt_Genemark1.C_Ctg_490051|Name=jgi.p|Trimin1|349794|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=516bp
MSYSWAQARLILSVLLLLGAHVWAFTPAALTPCQVARNPFSGIAPKRVYG
PGSAVRRAAASYSSSPHVYYFNDSDDDDYDEFAGTYCGETYSGRDWMPPL
ACEDTRNADALTGLSIAVGLPLLVVTAPTFLNSAHLMANDAHRERMRRLK
EQEQRPGFATLRVAFFHPEADAAEPSRDAASTPTTCVSDIPVRRRTSKLP
GGTWCKTCSDAQYIDGQLRATCARKYGRESRISTVRALPEDEVVNEDGLL
VNTTNYGGCTEGGELPGGTWCNSCIDATYVNGELSARCKGQYGRLWDNVR
ALPSDYVEYDGRRLINRTDYATDDLEVTASVGAAHAAPTVMAALSALAAD
PALPNNPRLLTRTCAELLRREARWVAVAGGIQQGSEEETDALLQRAVAQE
RTKWSAEVMTNIQGEEQRAPPPFPAAPVSTYAVVTLLLRWEHTPPGAHRF
LQAPLWFGRSRVKDAAEARQLLLWLLSNAHELRLRDVEVLWSPAEAGDVM
TEAEAYRKWPELRHG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010903DUF1517