mRNA_12588 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|349746 vs. uniprot
Match: A0A835YRD7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRD7_9STRA) HSP 1 Score: 176 bits (445), Expect = 6.510e-50 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1 Query: 91 MGTRASDETEQQLADAFSELELEVTGMTHEAKRRHKTVAAEAAASANLLGWAVEEEGGQLHILQWARANDIPWSSETCAIAATFGHSG 354 MGTRASDETEQQLADAFSELELEVTGMTHEAKRRHKTVAAEAAASANLLGWAVEEEGGQLHILQWARANDIPWSSETCAIAATFGHSG Sbjct: 1 MGTRASDETEQQLADAFSELELEVTGMTHEAKRRHKTVAAEAAASANLLGWAVEEEGGQLHILQWARANDIPWSSETCAIAATFGHSG 88
BLAST of jgi.p|Trimin1|349746 vs. uniprot
Match: A0A835YVI7_9STRA (Ipi1_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVI7_9STRA) HSP 1 Score: 1431 bits (3705), Expect = 0.000e+0 Identity = 949/949 (100.00%), Postives = 949/949 (100.00%), Query Frame = 1 Query: 1 MVKSKGFLQKASKSKSTADFKHLKSKVGKKAAKPLSHTDTSFKSKKLFVAKQSILADKEEGEPTSARGHTLSELQIQLKHYATATKKDALLGLRSLLARHPGIAQQRFAALSEGALDCLKCEEGSVRSLLLEYMYELLRDVSTSTLAPFGDIMLAYTISAITQLDRGVRKDGLSMLALLLARCPALVAARAHKLWPIYPPLLASDPAGKKQTIRSSATASLVALLQATTQNGKGSPAPGAAAAAAPELVWQARSSQNAVLLLRAFAPVPATLGSQVGDAGDAQSAALLGVLPEVLDRLLEVWVDASGLAEAAAGXXXXXXXXXXXXSDPAQLQLVADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVATFHAWLERQYFPAAMAAFPLRAEGSAXXXXXXXLNTTLCELTVAAGSSAHTPAAVAYMRDMLERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPGAARDARAPLLQAFGGYCEGLHGGKEAKAACAQFVCELVRTELNAARPGAAAAAAVASTVTGATMAQLCGWLRALPPLLPAWCASRAALAGDVLATLLEVARRTPXXXXXXXXXXXXXXXXXXXXXXXTAQLCAWLPSALRPTYAAGALLALPPRSQRTXXXXXXXXXXXXXXXXXXXPVLSATCGDPATPAATRSLLLEAAHXHRRVLTPSVYLTFLMGVLLGADVGADSGGGSASSAGAGGASRKCSAPGFATPADASPAESGAEAAWGAATARDAIAADVCLRLSDVASAARGAAVLAALVPQLSALLGGAYAGSGNSGGXXSSARGLRIAAAVALALLHATPPDARDAALLPLLPRFTAAAAALLGRGEAAAAPIHAPIAQLVRVRPSLLAALAEAXXXXXXXXXXXGNARSVEPLMLALQELVRRDTAAARAAGQGLVLAVSQLAECLRGSPVAALAQQLQADLELAVAAEGDVN 2847 MVKSKGFLQKASKSKSTADFKHLKSKVGKKAAKPLSHTDTSFKSKKLFVAKQSILADKEEGEPTSARGHTLSELQIQLKHYATATKKDALLGLRSLLARHPGIAQQRFAALSEGALDCLKCEEGSVRSLLLEYMYELLRDVSTSTLAPFGDIMLAYTISAITQLDRGVRKDGLSMLALLLARCPALVAARAHKLWPIYPPLLASDPAGKKQTIRSSATASLVALLQATTQNGKGSPAPGAAAAAAPELVWQARSSQNAVLLLRAFAPVPATLGSQVGDAGDAQSAALLGVLPEVLDRLLEVWVDASGLAEAAAGXXXXXXXXXXXXSDPAQLQLVADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVATFHAWLERQYFPAAMAAFPLRAEGSAXXXXXXXLNTTLCELTVAAGSSAHTPAAVAYMRDMLERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPGAARDARAPLLQAFGGYCEGLHGGKEAKAACAQFVCELVRTELNAARPGAAAAAAVASTVTGATMAQLCGWLRALPPLLPAWCASRAALAGDVLATLLEVARRTPXXXXXXXXXXXXXXXXXXXXXXXTAQLCAWLPSALRPTYAAGALLALPPRSQRTXXXXXXXXXXXXXXXXXXXPVLSATCGDPATPAATRSLLLEAAHXHRRVLTPSVYLTFLMGVLLGADVGADSGGGSASSAGAGGASRKCSAPGFATPADASPAESGAEAAWGAATARDAIAADVCLRLSDVASAARGAAVLAALVPQLSALLGGAYAGSGNSGGXXSSARGLRIAAAVALALLHATPPDARDAALLPLLPRFTAAAAALLGRGEAAAAPIHAPIAQLVRVRPSLLAALAEAXXXXXXXXXXXGNARSVEPLMLALQELVRRDTAAARAAGQGLVLAVSQLAECLRGSPVAALAQQLQADLELAVAAEGDVN Sbjct: 1 MVKSKGFLQKASKSKSTADFKHLKSKVGKKAAKPLSHTDTSFKSKKLFVAKQSILADKEEGEPTSARGHTLSELQIQLKHYATATKKDALLGLRSLLARHPGIAQQRFAALSEGALDCLKCEEGSVRSLLLEYMYELLRDVSTSTLAPFGDIMLAYTISAITQLDRGVRKDGLSMLALLLARCPALVAARAHKLWPIYPPLLASDPAGKKQTIRSSATASLVALLQATTQNGKGSPAPGAAAAAAPELVWQARSSQNAVLLLRAFAPVPATLGSQVGDAGDAQSAALLGVLPEVLDRLLEVWVDASGLAEAAAGXXXXXXXXXXXXSDPAQLQLVADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVATFHAWLERQYFPAAMAAFPLRAEGSAXXXXXXXLNTTLCELTVAAGSSAHTPAAVAYMRDMLERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPGAARDARAPLLQAFGGYCEGLHGGKEAKAACAQFVCELVRTELNAARPGAAAAAAVASTVTGATMAQLCGWLRALPPLLPAWCASRAALAGDVLATLLEVARRTPXXXXXXXXXXXXXXXXXXXXXXXTAQLCAWLPSALRPTYAAGALLALPPRSQRTXXXXXXXXXXXXXXXXXXXPVLSATCGDPATPAATRSLLLEAAHXHRRVLTPSVYLTFLMGVLLGADVGADSGGGSASSAGAGGASRKCSAPGFATPADASPAESGAEAAWGAATARDAIAADVCLRLSDVASAARGAAVLAALVPQLSALLGGAYAGSGNSGGXXSSARGLRIAAAVALALLHATPPDARDAALLPLLPRFTAAAAALLGRGEAAAAPIHAPIAQLVRVRPSLLAALAEAXXXXXXXXXXXGNARSVEPLMLALQELVRRDTAAARAAGQGLVLAVSQLAECLRGSPVAALAQQLQADLELAVAAEGDVN 949
BLAST of jgi.p|Trimin1|349746 vs. uniprot
Match: D7G8I2_ECTSI (Ipi1_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8I2_ECTSI) HSP 1 Score: 238 bits (606), Expect = 4.220e-61 Identity = 264/777 (33.98%), Postives = 342/777 (44.02%), Query Frame = 1 Query: 19 FLQKASKSKSTADFKHLKSKVGKKAAKPLSHTDTSFKSKKLFVAKQSILADKEEGEPTSARGHTLSELQIQLKHYATATKKDALLGLRSLLARHPGIAQQRFAALSEGALDCLKCEEGSVRSLLLEYMYELLRDVSTSTLAPFGDIMLAYTISAITQLDRGVRKDGLSMLALLLARCPALVAARAHKLWPIYPPLLASDPAGKKQTIRSSATASLVALLQATTQN-GKGSPAPGAAAA------------AAPELVWQARSSQNAVLLLRAFAPVPATL--------GSQVGDAG----DAQSAALLGVLPEVLDRLLEVWVDASGLAEAAAGXXXXXXXXXXXX-SDPAQLQL---VADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVATFHAWLERQYFPAAMAAFPLRA-EGSAXXXXXXX-------LNTTLCELTVAA--GSSAHTPAAVA--------------------------YMRDMLERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPGAARDARAPLLQAFGGYCEGLHGGKEAKAACAQFVCELVRTELNAARPGAAAAAAVASTVTGATMAQLCGWLRALPPLLPAWCASRAALAGDVLATLLEVARRT---------------PXXXXXXXXXXXXXXXXXXXXXXXTAQLCAWL-----------PSALRPTYAAGALLALPPRSQRTXXXXXXXXXXXXXXXXXXXPVLSATCGDP-ATPAATRSLLLEAAHXHRRVLTPSVYLTFLMGVL 2073 FL+K +K+ +TADFK LK+KVGK+A + SHTDTSFKSK++ V+ QSIL D + + +ARG + EL +QL+HY+ A+K++AL GL+S++ RH A+ FA L+E +L+ C + VR LL + LL VS T +PF ++ +AY +SA+T L +GVR+D L++LALLLAR PA VA RA +L P Y LLA+DPA KKQ R+ A SLV+L +A ++ G G L W+ S +N L+L P AT+ G G AG Q AL +LP VL+RL EVW++A G + PA VAD XXX AW R + P + AFP+R EG LN LCEL VAA G A T AA + +RD + R A R LL AFG + E L EAK C +FVC L T L GAA AV T ++C WLR+LP LL W + VL L+EVA+ XXXXXXXXXXXXXXXXXXXX AW P+ L + L LP +QR L+A C +P A RS +LE H RR L+PS YL FL+ +L Sbjct: 6 FLRKKNKTGATADFKRLKAKVGKRAPQAASHTDTSFKSKRVKVSAQSILHDLGDEDAVTARGQGVQELLVQLRHYSPASKREALAGLKSIVDRHRSFAEVNFARLAEASLELAVCFDNDVRKGLLAFQETLLNCVSARTFSPFANLYMAYVVSAMTSLTKGVRRDSLTLLALLLARFPAAVADRAERLAPNYATLLAADPASKKQAGRAEALQSLVSLFRAVSRRYGSGRSGXXXXXXXXXXXXXXXXXLGTARLSWKQGSRRNGALML---CPCSATVLAGNADSRGGGTGGAGPNADSPQIKALASILPTVLERLREVWIEALAAVPPDIGLMQNVVHALLEAIASPAWTAAGGGVADDVRINEGGRGINSGVVVQWHTATGHGSGXXXXXGASAWFSR-FVPLVLEAFPVRPLEGELLGNVEEERLRAIQGLNMGLCELVVAACAGPGAITAAAASAPDASGAGGGEDPSEWLAPVLAHVHEVLRDEVRRSGVVGPQMSSVLRVLSAATYNPAGTSSAFSDWTAQ------RQRLLSAFGDFLESLPAHCEAKLLCIRFVCCLATTLLR----GAANGEAVGHDPE--TPPEVCRWLRSLPELLCRWGCEFPRDSEAVLGVLVEVAKHALPPQQPLATRGTNVGGNSNXXXXXXXXXXXXXXXXXXXXXXXXXAWAVASSELLRSIEPALLVEFFGDQGFLLLPAAAQRNAISFLYHLPSIPGKVVCE---LAAACSEPTALDKDVRSFVLEVMHHRRRSLSPSAYLGFLVSIL 763
BLAST of jgi.p|Trimin1|349746 vs. uniprot
Match: A0A507DTJ5_9FUNG (Pre-rRNA-processing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DTJ5_9FUNG) HSP 1 Score: 114 bits (284), Expect = 6.130e-22 Identity = 69/202 (34.16%), Postives = 108/202 (53.47%), Query Frame = 1 Query: 55 DFKHLKSKVGKKAAKPLSHTDTSFKSKKLFVAKQSILADKEEGEPTSARGHTLSELQIQLKHYATATKKDALLGLRSLLARHPGIAQQRFAALSEGALDCLKCEEGSVRSLLLEYMYELLRDVSTSTLAPFGDIMLAYTISAITQLDRGVRKDGLSMLALLLARCPALVAARAHKLWPIYPPLLASDPAGKKQTIRSSATAS 660 DF+ K KVGKK + TD SFKS+ + V QS+ K E + R +L +L +QL+HY++ ++KDAL G+R + ++ + + + + E L E+ VR LL + + + V+ + PF +LAYT SA+T + +R DGL L + P LV A K+ P Y +L+++ GK Q+I S T S Sbjct: 14 DFRKTKLKVGKKVQPAQNQTDVSFKSQSIVVPNQSLGEVKPASELVNNRNQSLKDLIVQLRHYSSQSRKDALSGIRDIQIKYADTFKTQLSIIMEATAPILVDEDRQVRKSLLAFFKDFIPTVTRDNIRPFLSTILAYTCSAMTHISEDIRLDGLKFLTIWQDFYPTLVVMHAEKVIPNYLSMLSTN--GKSQSIAGSGTGS 213
BLAST of jgi.p|Trimin1|349746 vs. uniprot
Match: A0A1Y1VCV9_9FUNG (Pre-rRNA-processing protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1VCV9_9FUNG) HSP 1 Score: 108 bits (270), Expect = 2.450e-20 Identity = 67/199 (33.67%), Postives = 107/199 (53.77%), Query Frame = 1 Query: 70 KSKVGKKAAKPLSHTDTSFKSKKLFVAKQSILADKEEGEPTSARGHTLSELQIQLKHYATATKKDALLGLRSLLARHPGIAQQRFAALSEGALDCLKCEEGSVRSLLLEYMYELLRDVSTSTLAPFGDIMLAYTISAITQLDRGVRKDGLSMLALLLARCPALVAARAHKLWPIYPPLLASDPAGKKQTIRSSATASLV 666 K KVGKK P + TD SFKSK +++ Q I +K++ E T++R TL EL +Q+KHY++ T+KDAL G++ + +P + E + L +E VR LL++ L+ D+ + PF + +AY SA+T + +R D L L L + P L ++KL P + L D ++ SS ++SL+ Sbjct: 47 KLKVGKKKLAPSTQTDISFKSKAIYIPDQGITEEKKK-EVTNSRNLTLKELLVQVKHYSSVTRKDALNGIKEIYTNYPDEIFLNLGTIFEKTIPVLVDKEPDVRLALLQFFKALIPDLKQDQIKPFMSVFMAYLCSAMTHILEDIRLDSLKFLKLFIDNHPTLTIHYSNKLIPNFLNHLTGDMKMNSKSNSSSLSSSLL 244
BLAST of jgi.p|Trimin1|349746 vs. uniprot
Match: A0A8H7QSZ4_9FUNG (Pre-rRNA-processing protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7QSZ4_9FUNG) HSP 1 Score: 107 bits (266), Expect = 6.250e-20 Identity = 62/172 (36.05%), Postives = 93/172 (54.07%), Query Frame = 1 Query: 55 DFKHLKSKVGKKAAKPLSHTDTSFKSKKLFVAKQSILADKEEGEPTSARGHTLSELQIQLKHYATATKKDALLGLRSLLARHPGIAQQRFAALSEGALDCLKCEEGSVRSLLLEYMYELLRDVSTSTLAPFGDIMLAYTISAITQLDRGVRKDGLSMLALLLARCPALVAAR 570 DFK K KVGKK P + TDTSFKSK + + QSI DK E T++R TL +L +QLKHY + KK+AL GL + HP + + G L E+ VR +L ++ + D+ L PF +++ YT SA+T + VR D + ++ L + P ++ ++ Sbjct: 14 DFKKKKLKVGKKKLVPDNFTDTSFKSKSITLPNQSINEDKSH-EITTSRNLTLPDLVVQLKHYNSGVKKEALSGLTDICTAHPELLVSSLGLVVNGVLKLFVDEDRDVRKAILNFLKDTFVDIDLVELQPFMPLLIIYTCSAMTHIFEDVRLDAVKLMDLWIQIAPDVIVSK 184
BLAST of jgi.p|Trimin1|349746 vs. uniprot
Match: UPI00106DA235 (testis-expressed protein 10-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106DA235) HSP 1 Score: 100 bits (248), Expect = 1.130e-17 Identity = 62/176 (35.23%), Postives = 94/176 (53.41%), Query Frame = 1 Query: 55 DFKHLKSKVGKKAAKPLSHTDTSFKSKKLFVAKQSILADKEEGEPTSARGHTLSELQIQLKHYATATKKDALLGLRSLLARHPGIAQQRFAALSEGALDCLKCEEGSVRSLLLEYMYELLRDVSTSTLAPFGDIMLAYTISAITQLDRGVRKDGLSMLALLLARCPALVAARAHKL 582 DFK K KVGKK P + T TSFK+K + +++Q++ D + + T+ +G L +L HY T ++DALLGL+ L +HPGI + A+ + L E SVR L + + + +S + + PF ++AY SA+T L+ +R D L L L L P LV A + Sbjct: 14 DFKKKKLKVGKKLPMPDNVTRTSFKAKNINISQQNLNNDGVQSD-TNFKGQKLKDLLNLCSHYNTQAREDALLGLKDLFQKHPGILKSNLNAVLQRILSLTTDIESSVRKSFLAIISLVFKTLSETEILPFFSNVMAYLCSAMTHLNESIRLDSLKFLDLCLEHFPQLVKANPKNI 188
BLAST of jgi.p|Trimin1|349746 vs. uniprot
Match: UPI0009E5CA87 (testis-expressed protein 10-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E5CA87) HSP 1 Score: 94.4 bits (233), Expect = 4.430e-16 Identity = 56/176 (31.82%), Postives = 92/176 (52.27%), Query Frame = 1 Query: 55 DFKHLKSKVGKKAAKPLSHTDTSFKSKKLFVAKQSILADKEEGEPTSARGHTLSELQIQLKHYATATKKDALLGLRSLLARHPGIAQQRFAALSEGALDCLKCEEGSVRSLLLEYMYELLRDVSTSTLAPFGDIMLAYTISAITQLDRGVRKDGLSMLALLLARCPALVAARAHKL 582 DF+ +K KVGKK + TDTSFKS+ +F+ Q K + EPT+ R TL +L Q+ HY+ +K+AL+GL+ L H + ++ +++ + + + SVR LL + V +APF I++A+ A+T + ++ D L L L L P L+ + +L Sbjct: 14 DFQKVKLKVGKKLQPAQNATDTSFKSRSVFIPNQ---LQKLDSEPTNQRNQTLKDLLAQVGHYSVTMRKEALVGLKDLFQLHENLLEENLGIITKRVAEKMTDSDPSVRQSLLLLFCFIFPLVPQERMAPFSPIVMAHLSCAMTHIYDDIQHDSLGFLELCLQYFPTLMVTSSSQL 186
BLAST of jgi.p|Trimin1|349746 vs. uniprot
Match: UPI001CF40326 (testis-expressed protein 10 homolog n=4 Tax=Acropora TaxID=6127 RepID=UPI001CF40326) HSP 1 Score: 92.0 bits (227), Expect = 3.690e-15 Identity = 54/176 (30.68%), Postives = 91/176 (51.70%), Query Frame = 1 Query: 55 DFKHLKSKVGKKAAKPLSHTDTSFKSKKLFVAKQSILADKEEGEPTSARGHTLSELQIQLKHYATATKKDALLGLRSLLARHPGIAQQRFAALSEGALDCLKCEEGSVRSLLLEYMYELLRDVSTSTLAPFGDIMLAYTISAITQLDRGVRKDGLSMLALLLARCPALVAARAHKL 582 DF+ +K KVGKK + TDTSFKS+ +F+ Q EPT+ R L +L Q+ HY+ +++DAL+GL+ L H + + + + + + E SVR LL ++ + V +APF +++A+ A+T + ++ D L L L L P+L+ + +L Sbjct: 14 DFQKVKFKVGKKIQPAQNATDTSFKSRAIFIPSQLSQTT----EPTNQRNQNLKDLLAQVSHYSATSRQDALVGLKDLFHCHENLLHENLGIVIKKVAEKMTDNEPSVRQSLLLFLCSIFPMVPQEKMAPFSPLIIAHLSCAMTHIYDDIQHDSLGFLELCLQCFPSLMVTSSSQL 185
BLAST of jgi.p|Trimin1|349746 vs. uniprot
Match: UPI001CFA198F (testis-expressed protein 10 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFA198F) HSP 1 Score: 90.5 bits (223), Expect = 1.060e-14 Identity = 58/170 (34.12%), Postives = 91/170 (53.53%), Query Frame = 1 Query: 55 DFKHLKSKVGKKAAKPLSHTDTSFKSKKLFVAKQSILADKEEGE-PTSARGHTLSELQIQLKHYATATKKDALLGLRSLLARHPGIAQQRFAALSEGALDCLKCEEGSVRSLLLEYMYELLRDVSTSTLAPFGDIMLAYTISAITQLDRGVRKDGLSMLALLLARCPALV 561 DF+ +K KVGKK KP + T+TSFK+K ++V Q KE G PT+ R + EL QL HY K+ AL GL+ LLA+H + +++ ++ +VR + + L S + PF ++ A+ SA+T + G+++D L +L +LL PAL+ Sbjct: 10 DFQKIKFKVGKKKLKPNNVTETSFKTKAIYVPDQL----KENGTLPTNNRKLNVKELLTQLHHYNAGVKQGALTGLKDLLAQHSSVIDAHLSSIVTEVAAVFTDKDSAVRVAAVRLLRFLAPRTSEEQIGPFFPLISAHLSSAMTHIVEGIQEDALKVLDILLDHYPALL 175
BLAST of jgi.p|Trimin1|349746 vs. uniprot
Match: A0A2B4SCK0_STYPI (Testis-expressed sequence 10 protein n=3 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SCK0_STYPI) HSP 1 Score: 90.5 bits (223), Expect = 1.090e-14 Identity = 56/176 (31.82%), Postives = 93/176 (52.84%), Query Frame = 1 Query: 55 DFKHLKSKVGKKAAKPLSHTDTSFKSKKLFVAKQSILADKEEGEPTSARGHTLSELQIQLKHYATATKKDALLGLRSLLARHPGIAQQRFAALSEGALDCLKCEEGSVRSLLLEYMYELLRDVSTSTLAPFGDIMLAYTISAITQLDRGVRKDGLSMLALLLARCPALVAARAHKL 582 DF+ +K KVGKK + TD+SFKS+ +F+ Q D PT+ R TL +L Q+ HY+ T+++AL GL+ LL H + Q+ + + + + + SVR LL + + VS +APF +++A+ A+T + ++ D L L L L P+L+ + +L Sbjct: 47 DFQKVKFKVGKKLKPADNATDSSFKSRAIFIPTQLHTLD---NVPTNQRNQTLKDLLAQVGHYSVNTRQEALGGLKDLLHHHENLLQENLGIVIKKVCEKMSDSDPSVRQSLLLLLCFIFPLVSQEKMAPFSALVIAHLSCAMTHIYDDIQHDSLGFLELCLRYFPSLMVGSSSQL 219 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349746 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
BLAST of jgi.p|Trimin1|349746 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12588 ID=mRNA_12588|Name=jgi.p|Trimin1|349746|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=918bp|location=Sequence derived from alignment at Contig_48:178682..181984- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. TGCTGGATCGTTCTGACGGTAACAACTGCGGCGGCTGCGGGCTGCCAGACback to top protein sequence of jgi.p|Trimin1|349746 >Trimin1|349746|estExt_Genemark1.C_Ctg_480018 ID=Trimin1|349746|estExt_Genemark1.C_Ctg_480018|Name=jgi.p|Trimin1|349746|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=276bp MGTRASDETEQQLADAFSELELEVTGMTHEAKRRHKTVAAEAAASANLLGback to top mRNA from alignment at Contig_48:178682..181984- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12588 ID=mRNA_12588|Name=jgi.p|Trimin1|349746|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3303bp|location=Sequence derived from alignment at Contig_48:178682..181984- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_48:178682..181984- >mRNA_12588 ID=mRNA_12588|Name=jgi.p|Trimin1|349746|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=828bp|location=Sequence derived from alignment at Contig_48:178682..181984- (Tribonema minus UTEX_B_3156 )back to top |