Trimin1|167154|e_gw1.48.31.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|167154
Unique NameTrimin1|167154|e_gw1.48.31.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length358
Homology
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BLAST of jgi.p|Trimin1|167154 vs. uniprot
Match: A0A836CDK2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDK2_9STRA)

HSP 1 Score: 161 bits (408), Expect = 7.010e-43
Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0 
Query:    1 MPRALQELRIAECDLSSVLPQLHALIRFTNAGPQADALTLVKSISASSTLSLLPTCFGGLSALTVLDLTNCAELDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTHLELARVAVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWYCMALTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACNELLDRAPDSLKWVNWWVEIEYDNW 357
            MPRALQELRIAECDLSSVLPQLHALIRFTNAGPQADALTLVKSISASSTLSLLPTCFGGLSALTVLDLTNCAELDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTHLELARVAVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWYCMALTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACNELLDRAPDSLKWVNWWVEIEYDNW
Sbjct:    1 MPRALQELRIAECDLSSVLPQLHALIRFTNAGPQADALTLVKSISASSTLSLLPTCFGGLSALTVLDLTNCAELDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTHLELARVAVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWYCMALTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACNELLDRAPDSLKWVNWWVEIEYDNW 357
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|167154 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CDK2_9STRA7.010e-43100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 132..155
e-value: 20.0
score: 10.9
coord: 179..202
e-value: 60.0
score: 6.9
coord: 226..249
e-value: 8.9
score: 13.7
coord: 273..297
e-value: 400.0
score: 0.1
coord: 60..84
e-value: 96.0
score: 5.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 2..138
e-value: 3.4E-21
score: 77.1
coord: 139..347
e-value: 3.1E-46
score: 159.3
NoneNo IPR availablePANTHERPTHR48051:SF11SUBFAMILY NOT NAMEDcoord: 121..333
coord: 47..281
coord: 6..120
NoneNo IPR availablePANTHERPTHR48051FAMILY NOT NAMEDcoord: 121..333
coord: 47..281
NoneNo IPR availablePANTHERPTHR48051FAMILY NOT NAMEDcoord: 6..120
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 48..352

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_48contigContig_48:788573..789646 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167154mRNA_12629Tribonema minus UTEX_B_3156 mRNAContig_48 788573..789646 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|167154|e_gw1.48.31.1 ID=Trimin1|167154|e_gw1.48.31.1|Name=jgi.p|Trimin1|167154|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=358bp
MPRALQELRIAECDLSSVLPQLHALIRFTNAGPQADALTLVKSISASSTL
SLLPTCFGGLSALTVLDLTNCAELDSLPDSICDLASLTTLRLCNFAGLTF
LPDRISDLSALRDLCLHTCPQLTALPQTMSNLTSLTHLELARVAVTSLPD
RLGDLAALTKLSVRNCDVLMTVPDSIGTLGRLQSLSLRDLPIESLPRSLG
GLEALTCLQVEYFSASHSLPDTIGDLHALTQLSLNECGLVALPDSICRLS
AVTKLSLTSCEQLVALPERLGDMRALTQLNLWYCMALTALPDSICDLPSL
MALEINTCTHLARLPDHIGKLTTLRKLDVTACNELLDRAPDSLKWVNWWV
EIEYDNW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf