mRNA_6296 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349734
Unique NamemRNA_6296
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|349734 vs. uniprot
Match: A0A836CC67_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC67_9STRA)

HSP 1 Score: 448 bits (1152), Expect = 2.570e-149
Identity = 443/443 (100.00%), Postives = 443/443 (100.00%), Query Frame = 1 
Query:    1 MKHWLLAIIATTLLLANEANGFITPAGGGLSTRPSCRLNVASQSAEKYQSMRASEIKAELDSMGVRYDDCFEKSELVARLAEAKANPAAAXXXXXXXXXXXXXXXXXXXXAAGGRAGSIGEIQSMRMSEIKKELEERGVDYSGLLEKSEFVARLADARARNGTKPQQQRSTAXXXXXXXXXXXXXXXXXXXXGRPKDPNEYDPSYRDVKVQRMKKPEPQQPSGGAPQQPPFGXXXXXXXXXXXTGAGAGSSXXXXXXXXXXXXXXXXXXXXXXXLGSLLGGLSGXXXXXXLXXXXXXXXXXGPAPGRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAGGARSGGMGGVGDMLSKVMGNPKAMAALQXXXXXXXXXXXXXXXXXXXSAIGKYARDPDIMTVIQEIRSIL 1329
            MKHWLLAIIATTLLLANEANGFITPAGGGLSTRPSCRLNVASQSAEKYQSMRASEIKAELDSMGVRYDDCFEKSELVARLAEAKANPAAAXXXXXXXXXXXXXXXXXXXXAAGGRAGSIGEIQSMRMSEIKKELEERGVDYSGLLEKSEFVARLADARARNGTKPQQQRSTAXXXXXXXXXXXXXXXXXXXXGRPKDPNEYDPSYRDVKVQRMKKPEPQQPSGGAPQQPPFGXXXXXXXXXXXTGAGAGSSXXXXXXXXXXXXXXXXXXXXXXXLGSLLGGLSGXXXXXXLXXXXXXXXXXGPAPGRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAGGARSGGMGGVGDMLSKVMGNPKAMAALQXXXXXXXXXXXXXXXXXXXSAIGKYARDPDIMTVIQEIRSIL
Sbjct:    1 MKHWLLAIIATTLLLANEANGFITPAGGGLSTRPSCRLNVASQSAEKYQSMRASEIKAELDSMGVRYDDCFEKSELVARLAEAKANPAAAXXXXXXXXXXXXXXXXXXXXAAGGRAGSIGEIQSMRMSEIKKELEERGVDYSGLLEKSEFVARLADARARNGTKPQQQRSTAXXXXXXXXXXXXXXXXXXXXGRPKDPNEYDPSYRDVKVQRMKKPEPQQPSGGAPQQPPFGXXXXXXXXXXXTGAGAGSSXXXXXXXXXXXXXXXXXXXXXXXLGSLLGGLSGXXXXXXLXXXXXXXXXXGPAPGRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAGGARSGGMGGVGDMLSKVMGNPKAMAALQXXXXXXXXXXXXXXXXXXXSAIGKYARDPDIMTVIQEIRSIL 443
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BLAST of jgi.p|Trimin1|349734 vs. uniprot
Match: D7G5D2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D2_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 3.300e-9
Identity = 49/115 (42.61%), Postives = 61/115 (53.04%), Query Frame = 1 
Query:  151 MRASEIKAELDSMGVRYDDCFEKSELVARLAEAKANPAAAXXXXXXXXXXXXXXXXXXXXAAGGRAGSIGEIQSMRMSEIKKELEERGVDYSGLLEKSEFVARLADARARNGTKP 495
            M A +IKAELD++GV Y    EKSE V +LAEA+      X                   A+     +  E  +M +S IK+EL+ERGV Y GL EKSEFV  L DARA+  T P
Sbjct:  272 MTAGQIKAELDALGVSYVSLLEKSEFVMKLAEAEDEKKEKXEEA----------------ASPAGEDAADEASAMLVSAIKEELDERGVRYRGLFEKSEFVDLLVDARAKGITAP 370
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BLAST of jgi.p|Trimin1|349734 vs. uniprot
Match: D7G4D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D5_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 3.760e-8
Identity = 60/139 (43.17%), Postives = 71/139 (51.08%), Query Frame = 1 
Query:  151 MRASEIKAELDSMGVRYDDCFEKSELVARLAEAKANPAAAXXXXXXXXXXXXXXXXXXXXA------------------------AGGRAGSIGEIQSMRMSEIKKELEERGVDYSGLLEKSEFVARLADARARNGTKP 495
            M A +IKAELD++GV Y    EKSE V +LAEA+ +                XXXXXXXX                         AG  A    E+ +MR+S IKKEL+ERGV Y GL EKSEFV  L DARA+  T P
Sbjct:  537 MTAGQIKAELDALGVGYVGLLEKSEFVMKLAEARVDGGGKAALEGESSDAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEDAAD--EVSAMRVSAIKKELDERGVGYRGLFEKSEFVDLLVDARAKGITAP 673
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BLAST of jgi.p|Trimin1|349734 vs. uniprot
Match: A0A7R9ZLA2_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLA2_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.610e-6
Identity = 56/152 (36.84%), Postives = 76/152 (50.00%), Query Frame = 1 
Query:   94 TRPSCRLNVASQSAEKYQSMRASEIKAELDSMGVRYDDCFEKSELVARLAEAKAN---PAAAXXXXXXXXXXXXXXXXXXXXAAGGRAGSIGEIQ---------SMRMSEIKKELEERGVDYSGLLEKSEFVARLADARARNGTKPQQQRST 513
            +R + RL  +S S  +  +MRA EIK EL+S GV      EKSELV+ L +A+++   P AA             XX           G   EI+         +M+ SE+KKELEERGV      EKSEFV  LA+AR  +G + + +  T
Sbjct:   56 SRQTSRL-FSSTSLPEISAMRAGEIKKELESYGVSTKAFLEKSELVSALKKARSDGMTPKAAASTASTTADAGTSXXSGTAAKQENDDGRPREIRLQEEMDKCKAMKASELKKELEERGVSTKTFFEKSEFVKALAEARV-DGVQKKDEEET 205
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BLAST of jgi.p|Trimin1|349734 vs. uniprot
Match: A0A1Z5KBL5_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBL5_FISSO)

HSP 1 Score: 61.2 bits (147), Expect = 2.230e-6
Identity = 74/182 (40.66%), Postives = 100/182 (54.95%), Query Frame = 1 
Query:    1 MKHWLLAIIATTLLLANEANGFITPAGGGLSTRPSCRLNVASQSAEK------YQSMRASEIKAELDSMGVRYDDCFEKSELVARLAEAKAN---PAAAXXXXXXXXXXXXXXXXXXXXAAGGRAGS------IGEIQSMRMSEIKKELEERGVDYSGLLEKSEFVARLADARARNGTKPQQ 501
            ++ WLL    T  LLA+  + F+          P+      S +A+K       ++MRA EIK EL+S G+      EKSELV  L +A+A    P  +   XXXXXXXXXXXXXXXXX   G+  S      + ++QSM+ SE+KKELEE GV      EK EF+  LA+AR  +G K ++
Sbjct:    8 LRRWLLTY--TGFLLASSVHAFVPHRP----VMPAFAWQHHSMTADKATDLPMIETMRAGEIKKELESYGISTVSFLEKSELVNALTKARAEGLTPKVSSASXXXXXXXXXXXXXXXXXXXXGKPRSERIREEMEKLQSMKASEMKKELEELGVSTKSFFEKQEFMKALAEARV-DGVKNEE 182
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BLAST of jgi.p|Trimin1|349734 vs. uniprot
Match: A0A7S3SC83_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SC83_EMIHU)

HSP 1 Score: 59.7 bits (143), Expect = 2.300e-6
Identity = 58/120 (48.33%), Postives = 76/120 (63.33%), Query Frame = 1 
Query:  118 VASQSAEKYQSMRASEIKAELDSMGVRYDD-CFEKSELVARLAEAKANPAAAXXXXXXXXXXXXXXXXXXXXAAGGRAGSIGEIQSMRMSEIKKELEERGVDYSGLLEKSEFVARLADAR 474
            ++S+ A   + M+  EIK ELDS GV +   CFE++ELVA L +A++ PA A  XXXXXXXXXXXX      AA G A     I +M +  I++EL+ RGV  +G  EK+EFVA L  AR
Sbjct:   58 LSSEVAMPPEEMKLKEIKEELDSRGVTWRGVCFERTELVAALTQARSMPAPAAPXXXXXXXXXXXXSATP--AAEGDA-----IGAMSLKAIREELQRRGVTTTGFFEKAEFVAALRLAR 170
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BLAST of jgi.p|Trimin1|349734 vs. uniprot
Match: A0A7S0DDV7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DDV7_9EUKA)

HSP 1 Score: 60.8 bits (146), Expect = 2.850e-6
Identity = 47/141 (33.33%), Postives = 58/141 (41.13%), Query Frame = 1 
Query:  151 MRASEIKAELDSMGVRYDDCFEKSELVARLAEAKANPAAAXXXXXXXXXXXXXXXXXXXXAAGGRAGSIG------------------------------EIQSMRMSEIKKELEERGVDYSGLLEKSEFVARLADARARN 483
            MR SEI+ ELD  GVRY D  EK E V RL +A+                           +G  A S G                              ++  M++ EIK EL+ERGVDY GLLEKSE+V  L  A+  N
Sbjct:  109 MRVSEIRKELDDFGVRYKDLLEKKEYVERLYQARTG---TIDPQYKTKPGEASGPTSSTAQSGFSASSKGXXXXXXXXXXXXXXXXXXXXXKITKEEAKEQVSKMKIKEIKAELDERGVDYKGLLEKSEYVNLLVQAKVDN 246
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BLAST of jgi.p|Trimin1|349734 vs. uniprot
Match: A0A0M0JM96_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JM96_9EUKA)

HSP 1 Score: 59.7 bits (143), Expect = 5.140e-6
Identity = 59/122 (48.36%), Postives = 75/122 (61.48%), Query Frame = 1 
Query:  148 SMRASEIKAELDSMGVRYDD-CFEKSELVARLAEAKANPAAAXXXXXXXXXXXXXXXXXXXX-----AAGGRAGSIGEIQSMRMSEIKKELEERGVDYSGLLEKSEFVARLADARARNGTKP 495
            SMR  E+K ELD  GV +    FEK EL   L +A++ P A+   XXXXXXXXXXXXXXXX      AA     S+G +++M++++IK EL+  GVD S L EK+E VA L  ARA     P
Sbjct:   10 SMRLKELKDELDKRGVTWRGIAFEKEELARLLVDARSRPPASSAPXXXXXXXXXXXXXXXXAKAAQDAAWASRSSMGNVETMKVADIKAELKSLGVDTSALFEKTELVAALIKARASKPPTP 131
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BLAST of jgi.p|Trimin1|349734 vs. uniprot
Match: A0A7S2RC63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RC63_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 6.130e-6
Identity = 44/121 (36.36%), Postives = 56/121 (46.28%), Query Frame = 1 
Query:  124 SQSAEKYQSMRASEIKAELDSMGVRYDDCFEKSELVARLAEAK-ANPAAAXXXXXXXXXXXXXXXXXXXXAAGGRAGSIGEIQSMRMSEIKKELEERGVDYSGLLEKSEFVARLADARARN 483
            S SA    SM A EIK EL  +G   +  F+K  L A L  A+ A P                        +      +  I+ MR+ EIKKEL+ RGV  + LLEK EFV  LA+AR R+
Sbjct:   42 SASASDATSMSAREIKQELKDLGYPTEGLFDKESLAAALQRAREAGPRGPAERAAAPPPNPAPAESSDSGLS--MEAEVDAIKGMRLGEIKKELQTRGVSTASLLEKGEFVTALAEARIRD 160
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BLAST of jgi.p|Trimin1|349734 vs. uniprot
Match: A0A6H5KUZ2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUZ2_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 8.200e-5
Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = 1 
Query:  361 EIQSMRMSEIKKELEERGVDYSGLLEKSEFVARLADARARNGTKP 495
            E+ +MR+S IKKEL+ERGV Y GL EKSEFV  L DARA+  T P
Sbjct:  692 EVSAMRISAIKKELDERGVGYRGLFEKSEFVDLLVDARAKGITAP 736
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349734 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A836CC67_9STRA2.570e-149100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G5D2_ECTSI3.300e-942.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4D5_ECTSI3.760e-843.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9ZLA2_9STRA1.610e-636.84Hypothetical protein n=2 Tax=Craspedostauros austr... [more]
A0A1Z5KBL5_FISSO2.230e-640.66Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S3SC83_EMIHU2.300e-648.33Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
A0A7S0DDV7_9EUKA2.850e-633.33Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A0M0JM96_9EUKA5.140e-648.36Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A7S2RC63_9STRA6.130e-636.36Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6H5KUZ2_9PHAE8.200e-564.44Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_47contigContig_47:844384..848446 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349734|estExt_Genemark1.C_Ctg_470115
BRITEko00000,ko04131
KEGG koko:K22262
Descriptionplatelet formation
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsKOG1787@1|root,KOG1787@2759|Eukaryota
Evalue2.89e-09
Seed ortholog2880.D7G4D5
Hectar predicted targeting categorysignal peptide
TranscriptId350056
TrackFilteredModels1
ProteinId349734
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349734gene_6296Tribonema minus UTEX_B_3156 geneContig_47 844384..848446 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349734Trimin1|349734|estExt_Genemark1.C_Ctg_470115Tribonema minus UTEX_B_3156 polypeptideContig_47 844384..847873 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6296_1exon_6296_1Tribonema minus UTEX_B_3156 exonContig_47 844384..844815 +
exon_6296_2exon_6296_2Tribonema minus UTEX_B_3156 exonContig_47 845330..845548 +
exon_6296_3exon_6296_3Tribonema minus UTEX_B_3156 exonContig_47 846428..846990 +
exon_6296_4exon_6296_4Tribonema minus UTEX_B_3156 exonContig_47 847756..848446 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6296CDS_6296Tribonema minus UTEX_B_3156 CDSContig_47 844384..844815 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_6296UTR3_6296Tribonema minus UTEX_B_3156 three_prime_UTRContig_47 847874..848446 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6296 ID=mRNA_6296|Name=jgi.p|Trimin1|349734|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1905bp|location=Sequence derived from alignment at Contig_47:844384..848446+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGCATTGGCTACTTGCGATCATTGCTACCACGCTGCTGCTGGCCAA
TGAGGCCAACGGCTTCATAACGCCGGCTGGTGGCGGTCTCAGCACTAGGC
CATCATGTCGCCTCAACGTGGCTTCGCAGTCGGCGGAGAAGTACCAGAGC
ATGCGAGCAAGTGAAATCAAGGCCGAGCTAGACAGCATGGGCGTGCGGTA
TGACGATTGCTTTGAAAAGAGCGAGCTGGTTGCGAGACTGGCGGAGGCGA
AGGCAAATCCAGCAGCAGCACCTAAGCAATCACAGAAGCAGACCCGGACG
GAACCTGCGACGGGAGCCAAGACATCGGCAGCAGCAGGAGGACGGGCTGG
CAGTATAGGGGAGATACAGAGTATGCGAATGTCTGAAATCAAGAAGGAGC
TTGAGGAGCGGGGGGTCGACTATTCTGGCCTGCTGGAGAAATCGGAGTTT
GTGGCGAGGCTGGCGGATGCGCGCGCGCGCAACGGCACCAAGCCGCAGCA
GCAGCGCAGCACCGCTCAGTCATCTTCAACATCGAGCGGCGCAAAGCCCG
GCAGCGGCGGCGGCAGCAGCAGTGGCGGCAGGCCCAAGGACCCTAATGAG
TACGATCCCTCGTACAGGGACGTCAAGGTGCAGCGCATGAAGAAGCCGGA
GCCCCAGCAACCCAGCGGCGGCGCACCGCAGCAGCCCCCCTTTGGCGGCG
CCGCGCCCCAGCAGTCCCCCTTCGGCGGCACCGGCGCTGGCGCCGGCAGC
AGTCCTTTTGGGGGCGGCATGGGGGGCGCCAACCCCTTTGGCGGAGCGGG
CGGCGCCTCGGGGGGGTTTGACCTCGGGAGCCTGCTGGGGGGTCTCAGCG
GCTTGATGGGGGGCGGCGGTCTGGGGGGCATGGGGGGTATGGGGAGTATG
GGCGGGCCCGCTCCGGGGAGGCCGGGCCCAACTGCGGGGAGACAGACCCC
TAATGCGGGGAGACAGGCCCCCAATGCGGGGAGACAGGCCCCTAATGTTG
GCAGGCAGACTCCCAATGCAGGGAGGCAGGCCCCTAATGCGGGGAGACCG
GCTTCGGGTGCCGGGAGACCGGCGCAGAGTGCGGGGAGACCGGCCCCGAA
TTCGGGCGGGGGGGCGGGGGGGGCGCGCAGCGGGGGGATGGGCGGCGTGG
GGGACATGCTGTCGAAGGTCATGGGCAACCCCAAGGCGATGGCGGCGCTC
CAGAAGGCGCAGAGCAACCCCAAGGTGATGGCGGCGGTGCGGGACGTCAT
GGCAAACCCATCGGCGATCGGCAAGTACGCGCGCGATCCCGACATCATGA
CTGTGATACAGGAGATCCGGAGCATACTGTAGGCCGCTGCGCACTGCACA
GCAGATGAGGAGCACGCTGTCGGAAGCTACGCATTGCGGTGGCGCAGGGT
GGCAGCGCTGACGTCGTCGGCGCACGCGGCGCGGCGGCAGTGGTGCCGTT
GAGTGCCGCTGCATTGGCGGCAGCGGCGCGCGTTGCACTCGCACAACGCG
CAGCAACAGTCGTGCAGCCGTCAGTACTTGAAACTGTCGCAGGATGGCAG
CTCTCAAATGCAGCCAGAGCCAGTGCCGTTCAGGCACTCATCGCAAGATC
CATCATGGGGATGGACTGCGGCGGCGGCAGCAGCTGTGCGGACTGCGCAC
GTGCTAGTTCGCTGCCGGTGGCGGCTAGAAAGCTGTGCAGACAGTGTACA
CAAAAGCGCCACAACGTCCATGCAACAGCGCCACAACGGCCATGCAACAG
CGCCCGGCATGACGCGCACAGCAACTCGTGCACATGGCCACGCATAGTCG
TTAGATCTGTGTCCAATATTAGTATACACTGGCCTGTGCCGCCTTGAGTG
GCACCCTGTAGATATGTAGAGCCCATCATCTCATGAATGTACATATGACC
CTGCG
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protein sequence of jgi.p|Trimin1|349734

>Trimin1|349734|estExt_Genemark1.C_Ctg_470115 ID=Trimin1|349734|estExt_Genemark1.C_Ctg_470115|Name=jgi.p|Trimin1|349734|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=444bp
MKHWLLAIIATTLLLANEANGFITPAGGGLSTRPSCRLNVASQSAEKYQS
MRASEIKAELDSMGVRYDDCFEKSELVARLAEAKANPAAAPKQSQKQTRT
EPATGAKTSAAAGGRAGSIGEIQSMRMSEIKKELEERGVDYSGLLEKSEF
VARLADARARNGTKPQQQRSTAQSSSTSSGAKPGSGGGSSSGGRPKDPNE
YDPSYRDVKVQRMKKPEPQQPSGGAPQQPPFGGAAPQQSPFGGTGAGAGS
SPFGGGMGGANPFGGAGGASGGFDLGSLLGGLSGLMGGGGLGGMGGMGSM
GGPAPGRPGPTAGRQTPNAGRQAPNAGRQAPNVGRQTPNAGRQAPNAGRP
ASGAGRPAQSAGRPAPNSGGGAGGARSGGMGGVGDMLSKVMGNPKAMAAL
QKAQSNPKVMAAVRDVMANPSAIGKYARDPDIMTVIQEIRSIL*
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mRNA from alignment at Contig_47:844384..848446+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6296 ID=mRNA_6296|Name=jgi.p|Trimin1|349734|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4063bp|location=Sequence derived from alignment at Contig_47:844384..848446+ (Tribonema minus UTEX_B_3156 )
ATGAAGCATTGGCTACTTGCGATCATTGCTACCACGCTGCTGCTGGCCAA
TGAGGCCAACGGCTTCATAACGCCGGCTGGTGGCGGTCTCAGCACTAGGC
CATCATGTCGCCTCAACGTGGCTTCGCAGTCGGCGGAGAAGTACCAGAGC
ATGCGAGCAAGTGAAATCAAGGCCGAGCTAGACAGCATGGGCGTGCGGTA
TGACGATTGCTTTGAAAAGAGCGAGCTGGTTGCGAGACTGGCGGAGGCGA
AGGCAAATCCAGCAGCAGCACCTAAGCAATCACAGAAGCAGACCCGGACG
GAACCTGCGACGGGAGCCAAGACATCGGCAGCAGCAGGAGGACGGGCTGG
CAGTATAGGGGAGATACAGAGTATGCGAATGTCTGAAATCAAGAAGGAGC
TTGAGGAGCGGGGGGTCGACTATTCTGGCCTGGTAAGCAAATGAGAACCG
CCGAAGATGGTATTCCATCTTCCACAACACCCTGGTGCGCATCCCAGCGT
GAGAGGGGCATAGTTGTGCTGCAAGTGTTCCGGTTGACAAGCTGCAACTG
CTGCATGTTCTGCACAGTCGCTGACCGTCAAAGTAGCACATGCGAATCTG
CACTAGTGATGTGGACGCGTACCCGAGACGTTCTCACTCTGACCTAGAAG
CTTCCGATGCGCCATCGGCAATCCTCACTCACACCCGCTCAGTGGACTCT
GCCACATCACGAATTCAAGTGCTCATACAATGCCAGCAAGTACGCCACAT
GTGCATGCACGCAGCCGTTCGACTGATGAAGGCGAGCGAGTGCAGTCACG
CTGCACACCAGCTGCTCTCATGATATTCTTCTTAGAAGTATAACCAATTA
GTAGGCAATCTCCAACATGTGAGAAGCTCTAGCCTCTATGTGCCCTGAGT
TCCGACGCTTCACGCTCTTACCATTGCTCGCAACTCTCGCTCACAGCTGG
AGAAATCGGAGTTTGTGGCGAGGCTGGCGGATGCGCGCGCGCGCAACGGC
ACCAAGCCGCAGCAGCAGCGCAGCACCGCTCAGTCATCTTCAACATCGAG
CGGCGCAAAGCCCGGCAGCGGCGGCGGCAGCAGCAGTGGCGGCAGGCCCA
AGGACCCTAATGAGTACGATCCCTCGTACAGGGACGTCAAGGTGCAGCGC
ATGAAGAAGCCGGAGGTGAGCGCGATTTCTGCCTGCGCCCCGCAAACTTC
GACACCACCTGCCAAGTGGGGTTCATGTTTTGGAACGCACAGGCATCGAT
TGGTGTGCTCTCACAGTGAGTTCTTGATGCATGTGCTTCGTCGACAGCAG
GCACTGCGGCGCATTGCCGCATTCCGTCATGTGCCCATTGAGGTCCACCA
TAACCTTCTTCAGTAAATGACTAAGATTGCACATAGACATTCAGTTTACC
AGGCTCAAGTAGGGGGCCCAGGGCAAGGGTTTTTGCAAGTTGTTTGAGCA
TTGGAGGCTGATGGTGCATGTCAAGATGCGGTTGCGCAGATCAGCAGTAC
AGTACTGTTCCTTTGGCAGCAGTGCTCTTGCAGATTGAAATGGTGGCAGC
AGCAACAGCAGCAGCAGCAGCAGAACCTTAATTGCTAAAGCTGTTGGTAG
AGATGCTGGTGTTTCTTTTATTAGTAGTTATGGATCAGTGGCAGCAGTGC
CGGCTAGCACCCTCATGGCAGCAGAGCCGGCTAGCACCCGCAGCAGCAGC
AGCAGCAGCAGAATCGGCCGGCACCTGCAGCAGCGCAACCACGTGCCATT
CGCTGCTGCGATGCAGCTGCTGCTGCCAGGTGTGCAGCTGCGCGCGCACA
TGGCGTCATGTGACAACTCATTGCTCATGTCATCGGTCTGTGCAGACCTC
ACTCGTAGCGTTCCTGTGCAGAATTGGTTTCAGATGATGGCGGCGGGCCG
CCGGATCGTGCTGCGCGTGGCGTCGCCAACCCCCTTTGATGCAGCCCTCA
TCGACAAGCACCGAAACCGCTCTTTCACCTCTCATAGCGTCAAACGCACA
CCTCAAGCAACCCTACACGCGCGCCGCTCGCGAATCTCGCGCAGCCCCAG
CAACCCAGCGGCGGCGCACCGCAGCAGCCCCCCTTTGGCGGCGCCGCGCC
CCAGCAGTCCCCCTTCGGCGGCACCGGCGCTGGCGCCGGCAGCAGTCCTT
TTGGGGGCGGCATGGGGGGCGCCAACCCCTTTGGCGGAGCGGGCGGCGCC
TCGGGGGGGTTTGACCTCGGGAGCCTGCTGGGGGGTCTCAGCGGCTTGAT
GGGGGGCGGCGGTCTGGGGGGCATGGGGGGTATGGGGAGTATGGGCGGGC
CCGCTCCGGGGAGGCCGGGCCCAACTGCGGGGAGACAGACCCCTAATGCG
GGGAGACAGGCCCCCAATGCGGGGAGACAGGCCCCTAATGTTGGCAGGCA
GACTCCCAATGCAGGGAGGCAGGCCCCTAATGCGGGGAGACCGGCTTCGG
GTGCCGGGAGACCGGCGCAGAGTGCGGGGAGACCGGCCCCGAATTCGGGC
GGGGGGGCGGGGGGGGCGCGCAGCGGGGGGATGGGCGGCGTGGGGGACAT
GCTGTCGAAGGTCATGGGCAACCCCAAGGCGATGGCGGCGCTCCAGAAGG
CGCAGAGGTGAGGGTACTTCCGCTAAAATATGTTGATGTAGGGCGCCTCT
GCAGGGGGGGATGCGTGTTCGCCTGGTCTGCTACTGTGGAACGTGCGTTG
GTCACAGACAGTAATGTAAGTACAGTTCAAGAGTACACTGATGAATGGGT
GGACTGCGGCACCACGCCATACTCGCTGTGACCTGACTGTCGCAGACAGC
GCCGCCCGATCTGGTGCCACAAGCCCCATGTGCAGGCTGGGAACAGTCGA
TGCGTGCGTCTGTATCGAACCTGTGCGCCAATGTGTCCCTGTACACGCAC
ATTCAGGCTCAAATGTCAAGTTCAACAGCTGCGAGGATTGTGTGCAGCGA
TGCGCGCCAACGTCTTCAGGGCAGCCACTGCCTTGCGCCTGTACAGAGCC
TGTAGTTCGCCTGTATGCACAGCTTTTGATTATGTGTGCGCTGGTTGCGT
CGCGCAGCCTGTGTGCACCGTTCACGTCAAATGCCAGAGGTGCGTGAGCA
CGGTCGCATGCAGCAGGCCAATGCAGCAACGCAGCCCGGCACCCCCGTCG
CATGTGCGTGCGTTGGCGCAACACGCTAATGAGACGGCCACGGCGGCAAT
GGGTGGAGCGCCGCGCGCTAGGACAGCCGAAAGAGTCCTGATTTGCCCTG
CACACGTGCGTGCGCACCCGCGGCGCCATCAACGCCGCGCCTCTCGCTTA
CTTCAAGTGTTCCCAGCTGAATCCCCCCCCTCCCCCCTCCGCTGCTGTGC
ACTGCCGCCGCCGCCGCTGCAGCAACCCCAAGGTGATGGCGGCGGTGCGG
GACGTCATGGCAAACCCATCGGCGATCGGCAAGTACGCGCGCGATCCCGA
CATCATGACTGTGATACAGGAGATCCGGAGCATACTGTAGGCCGCTGCGC
ACTGCACAGCAGATGAGGAGCACGCTGTCGGAAGCTACGCATTGCGGTGG
CGCAGGGTGGCAGCGCTGACGTCGTCGGCGCACGCGGCGCGGCGGCAGTG
GTGCCGTTGAGTGCCGCTGCATTGGCGGCAGCGGCGCGCGTTGCACTCGC
ACAACGCGCAGCAACAGTCGTGCAGCCGTCAGTACTTGAAACTGTCGCAG
GATGGCAGCTCTCAAATGCAGCCAGAGCCAGTGCCGTTCAGGCACTCATC
GCAAGATCCATCATGGGGATGGACTGCGGCGGCGGCAGCAGCTGTGCGGA
CTGCGCACGTGCTAGTTCGCTGCCGGTGGCGGCTAGAAAGCTGTGCAGAC
AGTGTACACAAAAGCGCCACAACGTCCATGCAACAGCGCCACAACGGCCA
TGCAACAGCGCCCGGCATGACGCGCACAGCAACTCGTGCACATGGCCACG
CATAGTCGTTAGATCTGTGTCCAATATTAGTATACACTGGCCTGTGCCGC
CTTGAGTGGCACCCTGTAGATATGTAGAGCCCATCATCTCATGAATGTAC
ATATGACCCTGCG
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Coding sequence (CDS) from alignment at Contig_47:844384..848446+

>mRNA_6296 ID=mRNA_6296|Name=jgi.p|Trimin1|349734|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1332bp|location=Sequence derived from alignment at Contig_47:844384..848446+ (Tribonema minus UTEX_B_3156 )
ATGAAGCATTGGCTACTTGCGATCATTGCTACCACGCTGCTGCTGGCCAA
TGAGGCCAACGGCTTCATAACGCCGGCTGGTGGCGGTCTCAGCACTAGGC
CATCATGTCGCCTCAACGTGGCTTCGCAGTCGGCGGAGAAGTACCAGAGC
ATGCGAGCAAGTGAAATCAAGGCCGAGCTAGACAGCATGGGCGTGCGGTA
TGACGATTGCTTTGAAAAGAGCGAGCTGGTTGCGAGACTGGCGGAGGCGA
AGGCAAATCCAGCAGCAGCACCTAAGCAATCACAGAAGCAGACCCGGACG
GAACCTGCGACGGGAGCCAAGACATCGGCAGCAGCAGGAGGACGGGCTGG
CAGTATAGGGGAGATACAGAGTATGCGAATGTCTGAAATCAAGAAGGAGC
TTGAGGAGCGGGGGGTCGACTATTCTGGCCTGCTGGAGAAATCGGAGTTT
GTGGCGAGGCTGGCGGATGCGCGCGCGCGCAACGGCACCAAGCCGCAGCA
GCAGCGCAGCACCGCTCAGTCATCTTCAACATCGAGCGGCGCAAAGCCCG
GCAGCGGCGGCGGCAGCAGCAGTGGCGGCAGGCCCAAGGACCCTAATGAG
TACGATCCCTCGTACAGGGACGTCAAGGTGCAGCGCATGAAGAAGCCGGA
GCCCCAGCAACCCAGCGGCGGCGCACCGCAGCAGCCCCCCTTTGGCGGCG
CCGCGCCCCAGCAGTCCCCCTTCGGCGGCACCGGCGCTGGCGCCGGCAGC
AGTCCTTTTGGGGGCGGCATGGGGGGCGCCAACCCCTTTGGCGGAGCGGG
CGGCGCCTCGGGGGGGTTTGACCTCGGGAGCCTGCTGGGGGGTCTCAGCG
GCTTGATGGGGGGCGGCGGTCTGGGGGGCATGGGGGGTATGGGGAGTATG
GGCGGGCCCGCTCCGGGGAGGCCGGGCCCAACTGCGGGGAGACAGACCCC
TAATGCGGGGAGACAGGCCCCCAATGCGGGGAGACAGGCCCCTAATGTTG
GCAGGCAGACTCCCAATGCAGGGAGGCAGGCCCCTAATGCGGGGAGACCG
GCTTCGGGTGCCGGGAGACCGGCGCAGAGTGCGGGGAGACCGGCCCCGAA
TTCGGGCGGGGGGGCGGGGGGGGCGCGCAGCGGGGGGATGGGCGGCGTGG
GGGACATGCTGTCGAAGGTCATGGGCAACCCCAAGGCGATGGCGGCGCTC
CAGAAGGCGCAGAGCAACCCCAAGGTGATGGCGGCGGTGCGGGACGTCAT
GGCAAACCCATCGGCGATCGGCAAGTACGCGCGCGATCCCGACATCATGA
CTGTGATACAGGAGATCCGGAGCATACTGTAG
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