mRNA_6199 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349681
Unique NamemRNA_6199
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|349681 vs. uniprot
Match: A0A835YU43_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU43_9STRA)

HSP 1 Score: 891 bits (2302), Expect = 0.000e+0
Identity = 433/433 (100.00%), Postives = 433/433 (100.00%), Query Frame = 1
Query:    1 MAPPHLRLRLLLLAAFAVLRALAHDGPDLDVWAADLSHAPDSASANSALPEHVGATAAARSGHSAAQVPHWYHTRDTIAGDDSARLRFTAEVQHDIWRHQNPPTCEGRRYLETPYHRFGLGSLLNRASGTLGFAMNQGLIMLYHEELGSPNFLGSYCAGVLNPSCIFMPPSNCTAYARDPRNKVKIHTGSDDHSYPMPVVPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGLNEHFIYLSTDDPDVVHAAHAIRERNYRVFSLPCPALMDGAGVLPCRTNSTSANPGYDMEEDGTHADQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMVVDKACRDGSSVDIDHHDQCQCPEDAEELVG 1299
            MAPPHLRLRLLLLAAFAVLRALAHDGPDLDVWAADLSHAPDSASANSALPEHVGATAAARSGHSAAQVPHWYHTRDTIAGDDSARLRFTAEVQHDIWRHQNPPTCEGRRYLETPYHRFGLGSLLNRASGTLGFAMNQGLIMLYHEELGSPNFLGSYCAGVLNPSCIFMPPSNCTAYARDPRNKVKIHTGSDDHSYPMPVVPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGLNEHFIYLSTDDPDVVHAAHAIRERNYRVFSLPCPALMDGAGVLPCRTNSTSANPGYDMEEDGTHADQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMVVDKACRDGSSVDIDHHDQCQCPEDAEELVG
Sbjct:    1 MAPPHLRLRLLLLAAFAVLRALAHDGPDLDVWAADLSHAPDSASANSALPEHVGATAAARSGHSAAQVPHWYHTRDTIAGDDSARLRFTAEVQHDIWRHQNPPTCEGRRYLETPYHRFGLGSLLNRASGTLGFAMNQGLIMLYHEELGSPNFLGSYCAGVLNPSCIFMPPSNCTAYARDPRNKVKIHTGSDDHSYPMPVVPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGLNEHFIYLSTDDPDVVHAAHAIRERNYRVFSLPCPALMDGAGVLPCRTNSTSANPGYDMEEDGTHADQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMVVDKACRDGSSVDIDHHDQCQCPEDAEELVG 433          
BLAST of jgi.p|Trimin1|349681 vs. uniprot
Match: A0A835YS04_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS04_9STRA)

HSP 1 Score: 616 bits (1589), Expect = 3.840e-218
Identity = 321/468 (68.59%), Postives = 355/468 (75.85%), Query Frame = 1
Query:   25 RLLLLAAFAVLRALAHDGPDLDVWAAD-------------LSHAPDSASANSALPEHVGATAAARSGH--SAAQVPHWYHTRDTIA--GDDSARLRFTAEVQHDIWRHQNPPTCEGRRYLETPYHRFGLGSLLNRASGTLGFAMNQGLIMLYHEELGSPNFLGSYCAGVLNPSCIFMPPSNCTAYARDPRNKVKIHTGSDDHSYPMPVVPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGLNEHFIYLSTDDPDVVHAAHA-IRERNYRVFSLPCPALMDGAGVLPCRTNSTSANPGYDMEEDGTHADQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMVV---------------------------DKACRDGSSVDIDHHDQCQCPEDAEEL 1293
            +LLLLAA  +L      GPDLDV A +             +S  P +A+ +S L     A A   SGH  S AQVPHWYH+ DTIA    DSARLRFTAEVQ DIWRHQNPPTCEG+RY+ETP+H FGLGS+LNRASG LGFAMN+G+IMLYHE+LG+PNFLGSYCAGVLNP+CIFMPPSNCTAYAR+PRN V +     DHSYPMPVVPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYF+RLNARTSQE+I RR+RSAA GAAPLPLPP+TI+VHVRHGDK +EMKLASW  H AR DRLA ++G +E FIYLSTDDP VVHAAH  +R+  Y VFSLPCP LMDG GVLPCRTN TSANPG D+ E G HA +IALFAVESLLLALEATHFVGQRGSSWARLIDELRMVV                            + C+DGS VD  H DQCQCPEDAEE 
Sbjct:    9 QLLLLAALTLLCVPTDSGPDLDVRATNSDLDFRATGLPYTISITPHAAT-SSGLAGSEPAAATESSGHTGSDAQVPHWYHSHDTIAPADGDSARLRFTAEVQQDIWRHQNPPTCEGQRYMETPHHGFGLGSILNRASGMLGFAMNKGVIMLYHEKLGAPNFLGSYCAGVLNPACIFMPPSNCTAYARNPRNNVTVEKNYLDHSYPMPVVPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFTRLNARTSQELITRRMRSAASGAAPLPLPPNTISVHVRHGDKRSEMKLASWNAHLARADRLAHKQGFSERFIYLSTDDPKVVHAAHMPLRDPLYSVFSLPCPELMDGLGVLPCRTNITSANPGLDVAEHGAHAGEIALFAVESLLLALEATHFVGQRGSSWARLIDELRMVVVGSSKSCCLPYGNVSCDLPVSLRPLPERETCQDGSPVDTHHPDQCQCPEDAEEF 475          
BLAST of jgi.p|Trimin1|349681 vs. uniprot
Match: A0A835Z6Q9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Q9_9STRA)

HSP 1 Score: 301 bits (771), Expect = 2.320e-93
Identity = 169/356 (47.47%), Postives = 211/356 (59.27%), Query Frame = 1
Query:  169 AAARSGHSAAQVPHWYHTRDTIAGDDSARLRFTAEVQHDIWRHQNPPTCEGRRYLETPYHRFGLGSLLNRASGTLGFAMNQGLIMLYHEELGSPNFLGSYC--AGVLNPSCIFMPPSNCTAYARDPRNKVKIHTGSDDHSYPMPVVPDKWVQRW-AETDMSSSG--MVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGLNE--HFIYLSTDDPDVVHAAHAIRERNYRVFSLPCPALMDGAGVLPCRTNSTSANPGYDMEEDG-THADQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMVV 1212
            AAAR+  S   +P WY     ++G    RL  T EVQ DIWR QNPP+C GR  +  P   +GL + L+ A+G+LG AM  G +  +H   G+  F G YC  AG  NPSC+ MPP+NCT +A      V+I       +Y    +P KW  R+ AE    S    ++ L YWWRAQ A Y  RLN RTS E+  RR  SAARG+APLPLP D  +VHVRHGDK  EM L SW  H       AR RG+ E    +YL+TDDP VV +A A     +  + LPCP   DGA +LPCRT   + NP +D   +G  HAD+I LF++E L++ALEATHFVGQRGSSW  LID LR  +
Sbjct:  176 AAARAIDSEDTIPPWYQPNFRLSGAPHTRLPLTEEVQDDIWRSQNPPSCAGRALVLHPPSDYGLSAELHWAAGSLGMAMEHGHLFSWHAATGASAFTGHYCDAAGAHNPSCLLMPPTNCTDHAAAVAAGVEIVPYKAGQNY---TIPTKWRNRFEAEVPPGSPWRKVMTLNYWWRAQVATYLFRLNERTSHELTQRRRASAARGSAPLPLPLDAFSVHVRHGDKWKEMTLQSWDAHEGAARDAARARGVPESRRAVYLTTDDPTVVESARATP--GWTTYVLPCPVAADGA-LLPCRTTDNTTNPAFDAGTEGHMHADEITLFSLEGLMVALEATHFVGQRGSSWTVLIDNLRQTL 525          
BLAST of jgi.p|Trimin1|349681 vs. uniprot
Match: A0A836CJ51_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ51_9STRA)

HSP 1 Score: 294 bits (753), Expect = 5.720e-93
Identity = 164/348 (47.13%), Postives = 208/348 (59.77%), Query Frame = 1
Query:  202 VPHWYHTRDTIAGDDSARLRFTAEVQHDIWRHQNPPTCEGRRYLETPYHRFGLGSLLNRASGTLGFAMNQGLIMLYHEELGSPNFLGSYC--AGVLNPSCIFMPPSNCTAYARDPRNKVKIHTGSDDHSYPMPVVPDKWVQRWAETDMSSSG----MVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGL--NEHFIYLSTDDPDVVHAAHAIRERNYRVFSLPCPALMDGAGVLPCRTNSTSANPGY---DMEEDGTHADQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMVV 1212
            +P WY     ++G    RL  T EVQ DIWR QNPP C G   +      FGL + L+ A+G+LG AM  G I  +H   G+  F+G YC  AGV NPSC F+PPSNC+  A      V  +     H+Y    +P K+     E++M        ++ L YWWRAQ A Y  R N RTS+E+I RR RSAARGA PLPLPP+T ++HVRHGDK  EM L SW  H    D  AR RG+  ++ F+YL+TDDP VV +A A     + V+ LPCP   DG+  LPCRT   + NP +   D E+    AD+I LFA+E L++ALEATHFVGQRGSSW  LID+LR  +
Sbjct:   15 LPPWYQPYFRLSGTPQTRLPLTEEVQADIWRSQNPPACAGHALVVHRRSNFGLSAQLHWAAGSLGMAMEHGHIFTWHAASGTKAFMGRYCDEAGVHNPSCFFVPPSNCSDQAAAAGAAVVPYAV---HNY---TIPSKF-----ESEMPPGSPWRKVMTLNYWWRAQVATYLFRFNKRTSRELIQRRQRSAARGAPPLPLPPNTFSIHVRHGDKWKEMNLQSWDAHLHAADVAARARGVPASQRFVYLTTDDPRVVESALATH--GWTVYVLPCPLQADGS-PLPCRTTDNTTNPAFGISDSEQGHADADEIMLFALEGLMIALEATHFVGQRGSSWTVLIDDLRHTL 348          
BLAST of jgi.p|Trimin1|349681 vs. uniprot
Match: A0A836CN48_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN48_9STRA)

HSP 1 Score: 269 bits (688), Expect = 7.340e-84
Identity = 157/335 (46.87%), Postives = 199/335 (59.40%), Query Frame = 1
Query:  238 GDDSARLRFTAEVQHDIWRHQNPPTCEGRRYLET-PYHRFGLGSLLNRASGTLGFAMNQGLIMLYHEELGSPNFLGSYCA-GVLNPSCIFMPPSNCTAYARDPRNKVKIHTGSDDHSYPMPVV-------PDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGLNEHFIYLSTDDPDVVHAAHAIRERNYRVFSLPCPALMDGAGVLPCRTNSTSANP-GYDMEEDGTHA-DQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMV 1209
            G   ARL FT EVQ+DIW+HQNP +CEG++YL+  P++  GLGSLL+ A+  L  AM Q  I++YH + G+    GS+CA    N  C FMP SNC+AY  D          S+    P+P+V       P+KW QRWAET  ++    +L YWWRAQA  Y +RLN  TS+E+I RRL  AA G APLPLP DT+++HVRHGDK+ EM L SW++H  R D LA  R      ++LST+DP+VV  A A                 DG     C  N     P   D       A D + LF++E+LLLALEATHFVG RGS+W RLIDELRM+
Sbjct:    7 GKADARLVFTEEVQNDIWQHQNPSSCEGQQYLQLLPHNDGGLGSLLHVATVALACAMQQNAILVYHADYGARFSHGSFCAPDSSNLDCFFMPVSNCSAYVAD----------SNLTQLPIPLVRKRRLEVPEKWRQRWAETRQTA----DLLYWWRAQAVSYVARLNPPTSRELITRRLAHAAAGTAPLPLPDDTVSMHVRHGDKAFEMVLRSWQEHRTRADELAMARHFEGRTLFLSTEDPEVVTEARA-----------------DGTSASKCLPNPGIPAPLCTDSPRHRVLAFDDLILFSLENLLLALEATHFVGSRGSNWNRLIDELRML 310          
BLAST of jgi.p|Trimin1|349681 vs. uniprot
Match: A0A835ZAN1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAN1_9STRA)

HSP 1 Score: 268 bits (686), Expect = 6.800e-83
Identity = 154/342 (45.03%), Postives = 203/342 (59.36%), Query Frame = 1
Query:  202 VPHWYHTRDTIAGDDSARLRFTAEVQHDIWRHQNPPTCEGRRYLET-PYHRFGLGSLLNRASGTLGFAMNQGLIMLYHEELGSPNFLGSYC-AGVLNPSCIFMPPSNCTAYARDPRNK----VKIHTGSDDHSYPMPVVPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGLNEHFIYLSTDDPDVVHAAHAIRERNYRVFSLPCPALMDGAGVLPCRTNSTSANPGYDMEEDGTHADQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMV 1209
            +P +Y       G + AR  FTAEVQ DIW+HQNPP+C+GR+YL   P+ + GLGSLL+  +  + +AM Q  I++YH++ G+    GS+C A   + +C FMP SNC+AY  D         K+     D       VP KW QRWA+T        +L YWWRAQA  Y +RLN +TS+E+I+RR   AA G  PLPLP DT++VHVRHGDK  EM L SW++H  R D LA+ R       +LST+DP+VV  AHA  +  + +  LP             R N   A     M E G  +D + LF++E+L +ALEATHF+G RGS+W RLIDELRMV
Sbjct:   34 LPAFYQPSFRPVGREGARPVFTAEVQADIWQHQNPPSCDGRKYLRLQPHTQGGLGSLLHVTTAAIAYAMQQNAILVYHKDYGATLSHGSFCPAHSRSLNCFFMPLSNCSAYMADAEMPGLPVYKVGRRRLD-------VPKKWRQRWADTRQKG----DLLYWWRAQAVAYVTRLNPQTSRELISRRRAHAAAGTVPLPLPNDTVSVHVRHGDKGAEMALRSWQEHKTRADELAKARRFRGRTAFLSTEDPEVVKEAHA--DGTWDILVLPYR-----------RDNGDFAQ----MAELGV-SDDLVLFSLENLFIALEATHFLGTRGSNWNRLIDELRMV 346          
BLAST of jgi.p|Trimin1|349681 vs. uniprot
Match: A0A835YGT7_9STRA (FUT8_N_cat domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGT7_9STRA)

HSP 1 Score: 280 bits (716), Expect = 1.360e-80
Identity = 147/327 (44.95%), Postives = 200/327 (61.16%), Query Frame = 1
Query:  244 DSARLRFTAEVQHDIWRHQNPPTCEGRRYLETPYHRFGLGSLLNRASGTLGFAMNQGLIMLYHEELGSPNFLGSYC--AGVLNPSCIFMPPSNCTAYARDPRNKVKIHTGSDDHSYPMPVVPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGLNEHFIYLSTDDPDVVHAAHAIRERNYRVFSLPCPALMDGAGVLPCRTNSTSANPGYDMEEDGTHADQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMVVDK 1218
            D+  L FT EVQ DIW+HQNPP+CEG+ ++  P H  GLGS+L+ A+  LG+A NQ  I+++ E  G     G  C  AG  N  C FMP SNC+ +          H   D   Y M V P KW  RW +T+ +     ++ YWWRAQA  Y  R N +T++ +  RRL+ A +G APLPLPP+T++VHVRHGDK  EMK  +W++H  R + +A+ R L E  +Y++T+DP V  A       ++  F LPCP L+ G   L CRT+ T  NP +  ++D    D++ LF+++ LLLALE THFVG RGS+W RLIDELRMV  +
Sbjct:   90 DNPLLPFTKEVQADIWKHQNPPSCEGQSFIHQPNHPAGLGSVLHVATAGLGYAFNQKSILVFGEYFGQQFGSGRLCDEAGAFNSQCFFMPASNCSTFVNASTVPAVPHKMKD---YEMQV-PQKWRTRWQDTNQTG----DIIYWWRAQAVAYLFRFNEQTAEMLRVRRLQIARQGVAPLPLPPNTVSVHVRHGDKVNEMKTYTWEEHLVRAEDVAKARQLKERHMYVTTEDPAV--ALQVQENPDWTTFILPCPKLI-GGHELNCRTDKTHGNPVF--QDDHMFEDEMVLFSLQGLLLALEGTHFVGVRGSNWTRLIDELRMVYGR 403          
BLAST of jgi.p|Trimin1|349681 vs. uniprot
Match: A0A836CMT9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMT9_9STRA)

HSP 1 Score: 259 bits (662), Expect = 6.930e-79
Identity = 151/347 (43.52%), Postives = 199/347 (57.35%), Query Frame = 1
Query:  199 QVPHWYHTRDTIAGDDSARLRFTAEVQHDIWRHQNPPTCEGRRYLETPYHRFGLGSLLNRASGTLGFAMNQGLIMLYHEELGSPNFLG---SYCAG--VLNPSCIFMPPSNCTAYA--RDPRNKVKIHTGSDDHSYPMPVVPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGLNEHFIYLSTDDPDVVHAAHAIRERNYRVFSLPCPALMDG--AGVLPCRTNSTSANPGYDMEEDGTHADQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMVV 1212
            ++P WY     I+   ++RL FT EVQ DIW HQNP +CE R ++       GLG L+  A+  L +AM  G I++ H+   +    G   SYC+   +    C FMP SNC+ +   R  RN     T         P+VP KW +RWAET+ + S    L  WWRAQ   Y +RLNART++E+  RRLRSAA GAAPLPLPP TI+VHVRHGDK  E++L SW  H   V+  AR +G  E  ++++TDD +V  A  A     +  +  PC A      A  + CRT  T  NPGY   +    A  + LF+++ LL ALEATHF GQRGS+W R+ID LRMV+
Sbjct:   52 RLPPWYAPNYRISDAFASRLPFTEEVQADIWAHQNPQSCENRTFVLQGSKPAGLGYLMGVANFPLAWAMEHGHILVLHQGFAAAQAEGEQDSYCSSQQLRGWDCFFMPLSNCSDHIGKRVERNFKWAPTAD-------PLVPAKWQRRWAETNQTGS----LLQWWRAQTTAYATRLNARTARELALRRLRSAAAGAAPLPLPPGTISVHVRHGDKYKELELMSWGDHLGAVNAAARAQGWKERALFVTTDDSEVAAAVRA-GVPGWTAYIQPCEAPYGARCAEQVRCRTTETDVNPGYATSDA---AADLTLFSLQGLLTALEATHFAGQRGSNWVRVIDRLRMVM 383          
BLAST of jgi.p|Trimin1|349681 vs. uniprot
Match: A0A835ZC10_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC10_9STRA)

HSP 1 Score: 207 bits (528), Expect = 1.750e-60
Identity = 118/286 (41.26%), Postives = 164/286 (57.34%), Query Frame = 1
Query:  367 LLNRASGTLGFAMNQGLIMLYHEELGSPNFLGSYC--AGVLNPSCIFMPPSNCTAYARDPRNKVKIHTGSDDHSYPMPVVPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGLNEHFIYLSTDDPDVVHAAHAIRERNYRVFSLPCPALMDGAGVLPCRTNSTSANPGYDMEEDGTHADQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMVVDK 1218
            +L+ A+  LG+A NQG I+LY ++ G     G  C  AG  N  C FMP SNC+A   D      +   + D+      VP KW  RW  T+ +     ++ YWWRAQA  Y  R N +T++ + ARRL+ A +G APLPLP +T++VHVRHGDK  EM   SW++H AR   +A  R L E ++Y++TDD  V   A                  ++G   L CR+ S + NP +  ++D    D++ LF+++ LLLALE THFVG RGS+W+RLIDELRMV  +
Sbjct:    1 MLHVATAGLGYAFNQGSILLYGDDYGKHFGSGRLCDAAGAHNSQCFFMPASNCSATV-DAAAAPAVPQKAWDY---RTQVPQKWRDRWEATNQTG----DIVYWWRAQAVAYLFRFNPQTAEALSARRLQIARQGVAPLPLPLNTVSVHVRHGDKVVEMTTFSWEEHLARAQDVAEARRLAERYMYVTTDDSAVALQAE-----------------LNGGHDLNCRSESATENPAF--QDDHQFEDEMVLFSLQGLLLALEGTHFVGARGSNWSRLIDELRMVYGR 259          
BLAST of jgi.p|Trimin1|349681 vs. uniprot
Match: A0A836CC71_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC71_9STRA)

HSP 1 Score: 189 bits (479), Expect = 3.140e-52
Identity = 102/207 (49.28%), Postives = 129/207 (62.32%), Query Frame = 1
Query:  598 VPDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGLNEHFIYLSTDDPDVV-HAAHAIRERNYRVFSLPCPALMDGAGV-LPCRTNSTSANPGYDMEEDGTHADQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMVV 1212
            VP KW +RWAET+ +    +NL YWWRAQ + Y  R NART++E+  RRLR+AA GA PLPLPP T AVHVRHGDK  EM L SW+ H A V+  A +    E  +Y+STDD  V    A       + V  LPCP         +PCRT + S NPG    +  ++A  + L ++E LL+ALEA HF GQRGS+W RLID LR+V+
Sbjct:  138 VPAKWQRRWAETNQT----MNLLYWWRAQGSAYLLRFNARTARELALRRLRAAASGAVPLPLPPGTAAVHVRHGDKFKEMALMSWRDHLAAVEAAAERERWPERRLYVSTDDAAVAAEVAAPGGVPGWTVHVLPCPEPRKRLPERVPCRTEANSDNPGTARIDGVSYAADLTLVSLEDLLIALEAMHFAGQRGSNWTRLIDRLRLVL 340          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349681 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YU43_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YS04_9STRA3.840e-21868.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z6Q9_9STRA2.320e-9347.47Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CJ51_9STRA5.720e-9347.13Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CN48_9STRA7.340e-8446.87Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835ZAN1_9STRA6.800e-8345.03Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YGT7_9STRA1.360e-8044.95FUT8_N_cat domain-containing protein n=1 Tax=Tribo... [more]
A0A836CMT9_9STRA6.930e-7943.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZC10_9STRA1.750e-6041.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CC71_9STRA3.140e-5249.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_47contigContig_47:181740..183847 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349681|estExt_Genemark1.C_Ctg_470027
Max annot lvl4751|Fungi
EggNOG OGs28KCQ@1|root,2S4QB@2759|Eukaryota,3A7D3@33154|Opisthokonta,3P5FX@4751|Fungi,3R3F5@4890|Ascomycota
Evalue5.58e-31
Seed ortholog13349.G1WY00
Hectar predicted targeting categorysignal peptide
TranscriptId350003
TrackFilteredModels1
ProteinId349681
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349681gene_6199Tribonema minus UTEX_B_3156 geneContig_47 181740..183847 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349681Trimin1|349681|estExt_Genemark1.C_Ctg_470027Tribonema minus UTEX_B_3156 polypeptideContig_47 181740..183847 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6199_3exon_6199_3Tribonema minus UTEX_B_3156 exonContig_47 181740..181829 -
exon_6199_2exon_6199_2Tribonema minus UTEX_B_3156 exonContig_47 181911..182027 -
exon_6199_1exon_6199_1Tribonema minus UTEX_B_3156 exonContig_47 182753..183847 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6199CDS_6199Tribonema minus UTEX_B_3156 CDSContig_47 182753..183847 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6199 ID=mRNA_6199|Name=jgi.p|Trimin1|349681|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1302bp|location=Sequence derived from alignment at Contig_47:181740..183847- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCACCGCCCCACCTGCGCCTGCGGCTCCTGCTGCTTGCAGCATTTGC
AGTCTTGCGCGCCCTCGCGCACGACGGTCCCGACTTGGACGTGTGGGCCG
CCGACCTCTCACACGCACCCGACTCAGCGTCTGCCAACAGTGCGCTGCCA
GAGCACGTCGGCGCGACAGCCGCTGCGCGCAGTGGTCACAGCGCTGCTCA
GGTGCCCCACTGGTACCACACGCGCGACACGATCGCGGGCGACGACTCCG
CGCGCCTCAGGTTCACTGCTGAGGTGCAGCACGACATATGGCGGCACCAG
AACCCGCCGACGTGCGAGGGACGACGCTACCTCGAGACGCCTTACCACAG
GTTCGGCCTGGGGTCGCTCCTAAACAGGGCGTCGGGCACGCTGGGATTCG
CCATGAATCAGGGGCTCATCATGCTCTACCACGAAGAGCTGGGCTCGCCC
AACTTCCTGGGGTCCTACTGCGCGGGCGTCCTTAACCCGTCATGCATCTT
CATGCCGCCCTCCAACTGCACGGCGTACGCACGCGACCCCCGCAACAAAG
TCAAGATCCACACCGGCTCGGACGACCACTCCTATCCGATGCCCGTGGTG
CCCGACAAGTGGGTCCAGCGCTGGGCAGAAACGGACATGAGCTCGTCAGG
CATGGTCAACCTGCAGTACTGGTGGCGCGCGCAGGCAGCGGGCTACTTCT
CCCGGCTCAACGCGCGCACATCGCAGGAGATGATCGCCAGGCGCTTGCGC
AGCGCGGCCCGCGGCGCTGCGCCGCTGCCGCTGCCGCCCGACACCATCGC
CGTGCACGTGCGCCACGGCGACAAGAGCACGGAGATGAAGCTGGCCTCGT
GGAAGAAGCACCACGCACGCGTGGACAGGCTTGCGCGTCAGCGCGGGCTC
AACGAGCACTTCATCTACCTTTCAACCGATGATCCTGACGTGGTGCATGC
CGCGCACGCGATCCGCGAGCGGAACTACCGCGTGTTTTCGCTGCCGTGCC
CGGCGCTGATGGATGGCGCGGGCGTGCTGCCGTGCCGCACCAATAGCACG
TCGGCGAACCCCGGGTACGACATGGAGGAGGACGGCACACACGCGGACCA
GATCGCGCTGTTCGCAGTGGAAAGCTTGCTCCTGGCATTGGAGGCCACAC
ACTTTGTCGGTCAGCGCGGCTCCAGCTGGGCCAGGCTCATAGACGAGCTG
CGCATGGTGGTGGACAAGGCCTGCCGCGATGGCAGCTCAGTCGACATAGA
CCACCACGACCAGTGCCAGTGTCCAGAGGACGCGGAGGAGCTAGTGGGGT
AG
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protein sequence of jgi.p|Trimin1|349681

>Trimin1|349681|estExt_Genemark1.C_Ctg_470027 ID=Trimin1|349681|estExt_Genemark1.C_Ctg_470027|Name=jgi.p|Trimin1|349681|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=434bp
MAPPHLRLRLLLLAAFAVLRALAHDGPDLDVWAADLSHAPDSASANSALP
EHVGATAAARSGHSAAQVPHWYHTRDTIAGDDSARLRFTAEVQHDIWRHQ
NPPTCEGRRYLETPYHRFGLGSLLNRASGTLGFAMNQGLIMLYHEELGSP
NFLGSYCAGVLNPSCIFMPPSNCTAYARDPRNKVKIHTGSDDHSYPMPVV
PDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFSRLNARTSQEMIARRLR
SAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGL
NEHFIYLSTDDPDVVHAAHAIRERNYRVFSLPCPALMDGAGVLPCRTNST
SANPGYDMEEDGTHADQIALFAVESLLLALEATHFVGQRGSSWARLIDEL
RMVVDKACRDGSSVDIDHHDQCQCPEDAEELVG*
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mRNA from alignment at Contig_47:181740..183847-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6199 ID=mRNA_6199|Name=jgi.p|Trimin1|349681|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2108bp|location=Sequence derived from alignment at Contig_47:181740..183847- (Tribonema minus UTEX_B_3156 )
ATGGCACCGCCCCACCTGCGCCTGCGGCTCCTGCTGCTTGCAGCATTTGC AGTCTTGCGCGCCCTCGCGCACGACGGTCCCGACTTGGACGTGTGGGCCG CCGACCTCTCACACGCACCCGACTCAGCGTCTGCCAACAGTGCGCTGCCA GAGCACGTCGGCGCGACAGCCGCTGCGCGCAGTGGTCACAGCGCTGCTCA GGTGCCCCACTGGTACCACACGCGCGACACGATCGCGGGCGACGACTCCG CGCGCCTCAGGTTCACTGCTGAGGTGCAGCACGACATATGGCGGCACCAG AACCCGCCGACGTGCGAGGGACGACGCTACCTCGAGACGCCTTACCACAG GTTCGGCCTGGGGTCGCTCCTAAACAGGGCGTCGGGCACGCTGGGATTCG CCATGAATCAGGGGCTCATCATGCTCTACCACGAAGAGCTGGGCTCGCCC AACTTCCTGGGGTCCTACTGCGCGGGCGTCCTTAACCCGTCATGCATCTT CATGCCGCCCTCCAACTGCACGGCGTACGCACGCGACCCCCGCAACAAAG TCAAGATCCACACCGGCTCGGACGACCACTCCTATCCGATGCCCGTGGTG CCCGACAAGTGGGTCCAGCGCTGGGCAGAAACGGACATGAGCTCGTCAGG CATGGTCAACCTGCAGTACTGGTGGCGCGCGCAGGCAGCGGGCTACTTCT CCCGGCTCAACGCGCGCACATCGCAGGAGATGATCGCCAGGCGCTTGCGC AGCGCGGCCCGCGGCGCTGCGCCGCTGCCGCTGCCGCCCGACACCATCGC CGTGCACGTGCGCCACGGCGACAAGAGCACGGAGATGAAGCTGGCCTCGT GGAAGAAGCACCACGCACGCGTGGACAGGCTTGCGCGTCAGCGCGGGCTC AACGAGCACTTCATCTACCTTTCAACCGATGATCCTGACGTGGTGCATGC CGCGCACGCGATCCGCGAGCGGAACTACCGCGTGTTTTCGCTGCCGTGCC CGGCGCTGATGGATGGCGCGGGCGTGCTGCCGTGCCGCACCAATAGCACG TCGGCGAACCCCGGGTACGACATGGAGGAGGACGGCACACACGCGGTGAG CACTGTTGCACGTCGCGCACGTATTTGAGGCGCACTCCATGGTCATGTAT ATATTGCATGTACTAGCACTGCGCAATTGGGCAGCCTAGCACCGGAGTAC GATGGCGTGACAATGGCAGTGGTCAAGGTTATGTGTTACATTGCACGACT TGTCTTCTGCGTGTCATATTATAAGTGATTGTTTAAGCAGCTGCTGTTCT TTATTTTGTTGACTGTACCATGGCGGCAGCAGGTTGTCAAGACGAAAGCC AACTGACATGTCCGATGCATCGTTGTGTCGCCGCCATTGTAGTATGCTTT CAATTCCGGCGCAGTTTTGTCGCTGGCATAACGATGCAGTTGGCAATTCT GGAGCTTGTGTTCGTGATGCCTTGCTGCTTTCCAGCAGCTGAGTTGCTTA GAGACTACAGTGTCACACAAATGATTGTCATCAACTGTAGATGGCAACAA TGTGCATGTCAGTGCGCCATGCCTGTCTGCATGCTATCACTTCTGAATCA GCTGCTTGCTCCTATACATGAAATCTGAACGACTCGAGTAGGTGTGGCCT CTGCATATTCATGCGCATACTCACATCATCCGACAGGTGCCCAGTGCCGT GGCCTCTGCGTATTCATACTCATACCCATGCTTCTATAGATGAACTCACG GGTGCCCATTGCCATTGCTGCTGCTGCTCTGCCTCCCCTGGTGTCCTGTG CACACAACGCGTTCTCACAGGACCAGATCGCGCTGTTCGCAGTGGAAAGC TTGCTCCTGGCATTGGAGGCCACACACTTTGTCGGTCAGCGCGGCTCCAG CTGGGCCAGGCTCATAGACGAGCTGCGCATGGTGGTGGTGGGCAGCTCAA AGAGCTGCTGCCTGCCGTATGGCAATGTCAGCTGCGATCTTCCCATTACA TTGAGACCCCTCCCTCAGGACAAGGCCTGCCGCGATGGCAGCTCAGTCGA CATAGACCACCACGACCAGTGCCAGTGTCCAGAGGACGCGGAGGAGCTAG TGGGGTAG
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Coding sequence (CDS) from alignment at Contig_47:181740..183847-

>mRNA_6199 ID=mRNA_6199|Name=jgi.p|Trimin1|349681|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1302bp|location=Sequence derived from alignment at Contig_47:181740..183847- (Tribonema minus UTEX_B_3156 )
ATGGCACCGCCCCACCTGCGCCTGCGGCTCCTGCTGCTTGCAGCATTTGC
AGTCTTGCGCGCCCTCGCGCACGACGGTCCCGACTTGGACGTGTGGGCCG
CCGACCTCTCACACGCACCCGACTCAGCGTCTGCCAACAGTGCGCTGCCA
GAGCACGTCGGCGCGACAGCCGCTGCGCGCAGTGGTCACAGCGCTGCTCA
GGTGCCCCACTGGTACCACACGCGCGACACGATCGCGGGCGACGACTCCG
CGCGCCTCAGGTTCACTGCTGAGGTGCAGCACGACATATGGCGGCACCAG
AACCCGCCGACGTGCGAGGGACGACGCTACCTCGAGACGCCTTACCACAG
GTTCGGCCTGGGGTCGCTCCTAAACAGGGCGTCGGGCACGCTGGGATTCG
CCATGAATCAGGGGCTCATCATGCTCTACCACGAAGAGCTGGGCTCGCCC
AACTTCCTGGGGTCCTACTGCGCGGGCGTCCTTAACCCGTCATGCATCTT
CATGCCGCCCTCCAACTGCACGGCGTACGCACGCGACCCCCGCAACAAAG
TCAAGATCCACACCGGCTCGGACGACCACTCCTATCCGATGCCCGTGGTG
CCCGACAAGTGGGTCCAGCGCTGGGCAGAAACGGACATGAGCTCGTCAGG
CATGGTCAACCTGCAGTACTGGTGGCGCGCGCAGGCAGCGGGCTACTTCT
CCCGGCTCAACGCGCGCACATCGCAGGAGATGATCGCCAGGCGCTTGCGC
AGCGCGGCCCGCGGCGCTGCGCCGCTGCCGCTGCCGCCCGACACCATCGC
CGTGCACGTGCGCCACGGCGACAAGAGCACGGAGATGAAGCTGGCCTCGT
GGAAGAAGCACCACGCACGCGTGGACAGGCTTGCGCGTCAGCGCGGGCTC
AACGAGCACTTCATCTACCTTTCAACCGATGATCCTGACGTGGTGCATGC
CGCGCACGCGATCCGCGAGCGGAACTACCGCGTGTTTTCGCTGCCGTGCC
CGGCGCTGATGGATGGCGCGGGCGTGCTGCCGTGCCGCACCAATAGCACG
TCGGCGAACCCCGGGTACGACATGGAGGAGGACGGCACACACGCGGACCA
GATCGCGCTGTTCGCAGTGGAAAGCTTGCTCCTGGCATTGGAGGCCACAC
ACTTTGTCGGTCAGCGCGGCTCCAGCTGGGCCAGGCTCATAGACGAGCTG
CGCATGGTGGTGGACAAGGCCTGCCGCGATGGCAGCTCAGTCGACATAGA
CCACCACGACCAGTGCCAGTGTCCAGAGGACGCGGAGGAGCTAGTGGGGT
AG
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