Trimin1|166320|e_gw1.43.15.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|166320
Unique NameTrimin1|166320|e_gw1.43.15.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length111
Homology
BLAST of jgi.p|Trimin1|166320 vs. uniprot
Match: A0A835YSE1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSE1_9STRA)

HSP 1 Score: 228 bits (582), Expect = 5.280e-76
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
Query:    1 MAQRRRALPSKWSAAENERLRRAVKLHGEPQWKLIAVTVGTRNHSQCLHRWRTVLRPGLAKGPWTAAEDEMLTNLVRQGDISNWGDVAAVITTRTCKQWPRAVAAPPESR 110
            MAQRRRALPSKWSAAENERLRRAVKLHGEPQWKLIAVTVGTRNHSQCLHRWRTVLRPGLAKGPWTAAEDEMLTNLVRQGDISNWGDVAAVITTRTCKQWPRAVAAPPESR
Sbjct:    1 MAQRRRALPSKWSAAENERLRRAVKLHGEPQWKLIAVTVGTRNHSQCLHRWRTVLRPGLAKGPWTAAEDEMLTNLVRQGDISNWGDVAAVITTRTCKQWPRAVAAPPESR 110          
BLAST of jgi.p|Trimin1|166320 vs. uniprot
Match: A0A836CHW8_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHW8_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.680e-31
Identity = 55/87 (63.22%), Postives = 61/87 (70.11%), Query Frame = 0
Query:   12 WSAAENERLRRAVKLHGEPQWKLIAVTVGTRNHSQCLHRWRTVLRPGLAKGPWTAAEDEMLTNLVRQGDISNWGDVAAVITTRTCKQ 98
            W+A E+ERLR  V L GE QWK IA  VGTRNH QCL RW+ VLRPGL KG WT AEDE+L  LV  G+  NWG VAA +  RT KQ
Sbjct:    1 WTAEEDERLRHVVALRGESQWKRIAAEVGTRNHVQCLQRWKKVLRPGLKKGNWTDAEDELLARLVEAGNFKNWGVVAAQLAGRTSKQ 87          
BLAST of jgi.p|Trimin1|166320 vs. uniprot
Match: A0A835YSN1_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSN1_9STRA)

HSP 1 Score: 113 bits (282), Expect = 3.920e-30
Identity = 53/63 (84.13%), Postives = 54/63 (85.71%), Query Frame = 0
Query:   36 AVTVGTRNHSQCLHRWRTVLRPGLAKGPWTAAEDEMLTNLVRQGDISNWGDVAAVITTRTCKQ 98
            A  V TRNH QCL RW+ VLRPGLAKGPWTA EDE L NLVRQGDISNWGDVAAVITTRTCKQ
Sbjct:    4 APQVETRNHVQCLQRWKKVLRPGLAKGPWTAEEDETLMNLVRQGDISNWGDVAAVITTRTCKQ 66          
BLAST of jgi.p|Trimin1|166320 vs. uniprot
Match: A0A835Z3R6_9STRA (Homeodomain-like protein (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3R6_9STRA)

HSP 1 Score: 105 bits (263), Expect = 7.550e-27
Identity = 49/90 (54.44%), Postives = 59/90 (65.56%), Query Frame = 0
Query:    9 PSKWSAAENERLRRAVKLHGEPQWKLIAVTVGTRNHSQCLHRWRTVLRPGLAKGPWTAAEDEMLTNLVRQGDISNWGDVAAVITTRTCKQ 98
            P KW+  E+ERL  AV+ HG  +WK IA  VGTRNH QCL RW+ VLRP L KG WT  ED +LT+ V+ G   NWG VA  +  RT +Q
Sbjct:    9 PRKWAPDEDERLNAAVQAHGATKWKRIAAQVGTRNHVQCLQRWKKVLRPDLKKGDWTPEEDALLTDTVQSGTCKNWGKVALHLPNRTYRQ 98          
BLAST of jgi.p|Trimin1|166320 vs. uniprot
Match: A0A835Z2I1_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2I1_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.820e-25
Identity = 49/88 (55.68%), Postives = 59/88 (67.05%), Query Frame = 0
Query:   11 KWSAAENERLRRAVKLHGEPQWKLIAVTVGTRNHSQCLHRWRTVLRPGLAKGPWTAAEDEMLTNLVRQGDISNWGDVAAVITTRTCKQ 98
            +W+A E+ERLR+AV+ HGE  WKLIA  VG+R+H QCL RW+ VLRPGL KG WTAAED  L   V      NW  V   +T RT +Q
Sbjct:    1 RWTAEEDERLRKAVQRHGEWHWKLIAADVGSRDHVQCLQRWKKVLRPGLRKGEWTAAEDARLARTVAACTPLNWSAVCKSLTGRTSRQ 88          
BLAST of jgi.p|Trimin1|166320 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA)

HSP 1 Score: 103 bits (258), Expect = 2.610e-24
Identity = 50/91 (54.95%), Postives = 62/91 (68.13%), Query Frame = 0
Query:    8 LPSKWSAAENERLRRAVKLHGEPQWKLIAVTVGTRNHSQCLHRWRTVLRPGLAKGPWTAAEDEMLTNLVRQGDISNWGDVAAVITTRTCKQ 98
            +P KW+  E+E LR AV+ +GE  WK IA  VGTRNH QCL RW+ VL+PGL KG W+A ED  L +LV +G   NWG +AA +  RT KQ
Sbjct:   26 IPRKWTLVEDEELRHAVRKYGESNWKDIAREVGTRNHVQCLQRWKKVLKPGLVKGQWSALEDAKLVDLVGKG-FKNWGQLAAQMPGRTSKQ 115          
BLAST of jgi.p|Trimin1|166320 vs. uniprot
Match: D8LSJ8_ECTSI (Myb-like DNA-binding protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSJ8_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 5.560e-22
Identity = 51/94 (54.26%), Postives = 61/94 (64.89%), Query Frame = 0
Query:    5 RRALPSKWSAAENERLRRAVKLHGEPQWKLIAVTVGTRNHSQCLHRWRTVLRPGLAKGPWTAAEDEMLTNLVRQGDISNWGDVAAVITTRTCKQ 98
            +R  P KWSA E+ RLR AV    E +WK IA  V TRNH QCL RW+ VL+PGL KG W+A ED+ L  LV +G   NWG VA+ +  RT KQ
Sbjct:   96 KRNKPVKWSAEEDRRLRDAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVGLVEKG-FRNWGQVASFMDGRTSKQ 188          
BLAST of jgi.p|Trimin1|166320 vs. uniprot
Match: A0A7S2BP72_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BP72_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.240e-21
Identity = 42/79 (53.16%), Postives = 53/79 (67.09%), Query Frame = 0
Query:    9 PSKWSAAENERLRRAVKLHGEPQWKLIAVTVGTRNHSQCLHRWRTVLRPGLAKGPWTAAEDEMLTNLVRQGDISNWGDV 87
            P +W+  E+++LR AVK  GE  WK IA  V +RNH QCL RW+ VL+PGL KG W+A ED ML  LV +G   NWG +
Sbjct:   33 PRRWTQEEDDKLRDAVKEFGEVNWKAIAERVASRNHVQCLQRWKKVLKPGLVKGQWSAQEDAMLVTLVSEG-FKNWGQL 110          
BLAST of jgi.p|Trimin1|166320 vs. uniprot
Match: D7FQG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG8_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 1.420e-21
Identity = 49/94 (52.13%), Postives = 61/94 (64.89%), Query Frame = 0
Query:    5 RRALPSKWSAAENERLRRAVKLHGEPQWKLIAVTVGTRNHSQCLHRWRTVLRPGLAKGPWTAAEDEMLTNLVRQGDISNWGDVAAVITTRTCKQ 98
            RR  P +WS  E+ERLR AV+ +    WK IA  V TRNH QCL RW+ VL PGL KG WT  ED++L ++V +G   NWG ++A I  RT KQ
Sbjct:   13 RRPHPRRWSLEEDERLRAAVERYHGTNWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWTPEEDQLLVSIVNEGH-KNWGSLSARIPGRTSKQ 105          
BLAST of jgi.p|Trimin1|166320 vs. uniprot
Match: A0A6H5K458_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K458_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 7.260e-21
Identity = 46/90 (51.11%), Postives = 59/90 (65.56%), Query Frame = 0
Query:    9 PSKWSAAENERLRRAVKLHGEPQWKLIAVTVGTRNHSQCLHRWRTVLRPGLAKGPWTAAEDEMLTNLVRQGDISNWGDVAAVITTRTCKQ 98
            P +WS  E+ERLR AV+ +    WK IA  V TRNH QCL RW+ VL PGL KG WT  ED++L ++V +G   NWG ++A +  RT KQ
Sbjct:   68 PRRWSPEEDERLRAAVERYHGTSWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWTPEEDKLLVSIVNEGH-KNWGSLSARVPGRTSKQ 156          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|166320 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YSE1_9STRA5.280e-76100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CHW8_9STRA1.680e-3163.22Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A835YSN1_9STRA3.920e-3084.13Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A835Z3R6_9STRA7.550e-2754.44Homeodomain-like protein (Fragment) n=2 Tax=Tribon... [more]
A0A835Z2I1_9STRA1.820e-2555.68Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A7S2UU49_9STRA2.610e-2454.95Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
D8LSJ8_ECTSI5.560e-2254.26Myb-like DNA-binding protein, putative n=2 Tax=Ect... [more]
A0A7S2BP72_9STRA1.240e-2153.16Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
D7FQG8_ECTSI1.420e-2152.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K458_9PHAE7.260e-2151.11MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 60..102
e-value: 5.5
score: 11.5
coord: 8..57
e-value: 4.5E-10
score: 49.5
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 56..98
score: 7.328832
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 4..55
score: 9.372615
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 11..55
e-value: 3.2942E-10
score: 49.4962
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 63..98
e-value: 3.58506E-5
score: 36.3994
NoneNo IPR availableGENE3D1.10.10.60coord: 60..99
e-value: 2.2E-8
score: 35.8
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 12..72
e-value: 8.5E-14
score: 51.6
NoneNo IPR availableGENE3D1.10.10.60coord: 3..59
e-value: 5.1E-15
score: 57.1
NoneNo IPR availablePANTHERPTHR46621SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4coord: 10..98
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..59
score: 20.224375
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 50..98
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 11..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_43contigContig_43:676578..678542 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|166320mRNA_13762Tribonema minus UTEX_B_3156 mRNAContig_43 676578..678542 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|166320|e_gw1.43.15.1 ID=Trimin1|166320|e_gw1.43.15.1|Name=jgi.p|Trimin1|166320|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=111bp
MAQRRRALPSKWSAAENERLRRAVKLHGEPQWKLIAVTVGTRNHSQCLHR
WRTVLRPGLAKGPWTAAEDEMLTNLVRQGDISNWGDVAAVITTRTCKQWP
RAVAAPPESR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf