Trimin1|349344|estExt_Genemark1.C_Ctg_410124 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|349344
Unique Name	Trimin1\|349344\|estExt_Genemark1.C_Ctg_410124
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	822

Homology

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BLAST of jgi.p|Trimin1|349344 vs. uniprot
Match: A0A835YTA0_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTA0_9STRA)

HSP 1 Score: 1571 bits (4069), Expect = 0.000e+0
Identity = 821/821 (100.00%), Postives = 821/821 (100.00%), Query Frame = 0

Query:    1 MARWARQWPSPEAKRQHRVALARARCRTHVARLRANPDLLRSRRERHLAAQKRWLAKQRGGAGGEXXXRSTGGPEPPYPPEQQAGEDGGTGTKEEEFLSVPDEARRPSSPPSVXXXXXXXRVDAGEAGADVPPRGEGDEAAEPAPAEPAAAEGEWWEEERGPSSPPPYLKDGYCPFRGLRASPPCARYYVDDPVYERLRLALERLVPGYELLAASSCSSDLLGLVHQWATCFGGETAGACLDLASAGGRGLPGRTCAARPRVDREAEGLRPKEQVLRLLGEEGRKSGSASFVDAWRSGAVQTAFVEHVRRRLVEDSPKPTILFLETAPVYYDACLTGGTLRALASLCARQGVALVTDEVMLSVRCGRPLSSDYARSFRPDAAVLGSKALGSAFVVVRRLSPLKHAFRSQPMMVGQEISAEAAEAAVRAIDYILREDLMGYIAGEGEARRRAAGASGAGDLWHDAPREVASAFPAYTRGSRVLLPLDYRFPPDGGEGAAEETVADRPPXXXTADEGRATRSRRSPLPSSPLAPLASEHVSADLSESSTRGGLGCGSEYLIDYGRRGLLQKANAPLLRHGRAFTPGWPDMSRPVNARRFSFRVRDTHGRLDAPGFARRALGLKIGNPRRPSEPVSEVRYCEEGEGWAFSVRCHPGSANVRRHLVECLPAPFREGWDLQTEDPNLGTSTDGREVFVERWAGRATVSPELGTEERRVSEAKRYPWTRECAVGGVRQADEGPGAIRQDARSGAASLREGRRLQSRDARANISPARARAAPTAETSGPAASAVASVTVPALAPAPAAEGNRRDLEEAESDDDDQDYI 821
            MARWARQWPSPEAKRQHRVALARARCRTHVARLRANPDLLRSRRERHLAAQKRWLAKQRGGAGGEXXXRSTGGPEPPYPPEQQAGEDGGTGTKEEEFLSVPDEARRPSSPPSVXXXXXXXRVDAGEAGADVPPRGEGDEAAEPAPAEPAAAEGEWWEEERGPSSPPPYLKDGYCPFRGLRASPPCARYYVDDPVYERLRLALERLVPGYELLAASSCSSDLLGLVHQWATCFGGETAGACLDLASAGGRGLPGRTCAARPRVDREAEGLRPKEQVLRLLGEEGRKSGSASFVDAWRSGAVQTAFVEHVRRRLVEDSPKPTILFLETAPVYYDACLTGGTLRALASLCARQGVALVTDEVMLSVRCGRPLSSDYARSFRPDAAVLGSKALGSAFVVVRRLSPLKHAFRSQPMMVGQEISAEAAEAAVRAIDYILREDLMGYIAGEGEARRRAAGASGAGDLWHDAPREVASAFPAYTRGSRVLLPLDYRFPPDGGEGAAEETVADRPPXXXTADEGRATRSRRSPLPSSPLAPLASEHVSADLSESSTRGGLGCGSEYLIDYGRRGLLQKANAPLLRHGRAFTPGWPDMSRPVNARRFSFRVRDTHGRLDAPGFARRALGLKIGNPRRPSEPVSEVRYCEEGEGWAFSVRCHPGSANVRRHLVECLPAPFREGWDLQTEDPNLGTSTDGREVFVERWAGRATVSPELGTEERRVSEAKRYPWTRECAVGGVRQADEGPGAIRQDARSGAASLREGRRLQSRDARANISPARARAAPTAETSGPAASAVASVTVPALAPAPAAEGNRRDLEEAESDDDDQDYI
Sbjct:    1 MARWARQWPSPEAKRQHRVALARARCRTHVARLRANPDLLRSRRERHLAAQKRWLAKQRGGAGGEXXXRSTGGPEPPYPPEQQAGEDGGTGTKEEEFLSVPDEARRPSSPPSVXXXXXXXRVDAGEAGADVPPRGEGDEAAEPAPAEPAAAEGEWWEEERGPSSPPPYLKDGYCPFRGLRASPPCARYYVDDPVYERLRLALERLVPGYELLAASSCSSDLLGLVHQWATCFGGETAGACLDLASAGGRGLPGRTCAARPRVDREAEGLRPKEQVLRLLGEEGRKSGSASFVDAWRSGAVQTAFVEHVRRRLVEDSPKPTILFLETAPVYYDACLTGGTLRALASLCARQGVALVTDEVMLSVRCGRPLSSDYARSFRPDAAVLGSKALGSAFVVVRRLSPLKHAFRSQPMMVGQEISAEAAEAAVRAIDYILREDLMGYIAGEGEARRRAAGASGAGDLWHDAPREVASAFPAYTRGSRVLLPLDYRFPPDGGEGAAEETVADRPPXXXTADEGRATRSRRSPLPSSPLAPLASEHVSADLSESSTRGGLGCGSEYLIDYGRRGLLQKANAPLLRHGRAFTPGWPDMSRPVNARRFSFRVRDTHGRLDAPGFARRALGLKIGNPRRPSEPVSEVRYCEEGEGWAFSVRCHPGSANVRRHLVECLPAPFREGWDLQTEDPNLGTSTDGREVFVERWAGRATVSPELGTEERRVSEAKRYPWTRECAVGGVRQADEGPGAIRQDARSGAASLREGRRLQSRDARANISPARARAAPTAETSGPAASAVASVTVPALAPAPAAEGNRRDLEEAESDDDDQDYI 821

[Close]

BLAST of jgi.p|Trimin1|349344 vs. uniprot
Match: A0A835Z2G4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2G4_9STRA)

HSP 1 Score: 758 bits (1958), Expect = 1.810e-264
Identity = 424/555 (76.40%), Postives = 438/555 (78.92%), Query Frame = 0

Query:    1 MARWARQWPSPEAKRQHRVALARARCRTHVARLRANPDLLRSRRERHLAAQKRWLAKQRGGAGGEXXXRSTGGPEPPYPPEQQAGEDGGTGTKEEEFLSVPDEARRPSSPPSVXXXXXXXRVDAGEAGADVPPRGE----------------------GDEAAEPAPAEPAAAEGEWWEEERGPSSPPPYLKDGYCPFRGLRASPPCARYYVDDPVYERLRLALERLVPGYELLAASSCSSDLLGLVHQWATCFGGETAGACLDLASAGGRGLPGRTCAARPRVDREAEGLRPKEQVLRLLGEEGRKSGS--ASFVDAWRSGAVQTAFVEHVRRRLVEDSPKPTILFLETAPVYYDACLTGGTLRALASLCARQGVALVTDEVMLSVRCGRPLSSDYARSFRPDAAVLGSKALGSAFVVVRRLSPLKHAFRSQPMMVGQEISAEAAEAAVRAIDYILREDLMGYIAGEGEARRRAAGASGAGDLWHDAPREVASAFPAYTRGSRVLLPLDYRFPPDGGEGAAEETVADRPPXXXTADEGRATRSRRSPLPSSPLA 531
            MARWARQWPS  AKR HR ALARAR R H ARLRANPDLL+ RRE H  AQ+R LA+QR         RS GGPEPP P EQ+AGE+       +    VPD  ++P SPP+V       RV     G DV                           GD  AEPA   PAAA  E WE+ERGPSSPPPYLKDGYCPFRGLRASPPCARYYVDDPVYERLRLALERLVPGYELLAASSCSSDLLGLVHQWATCFGGETAG CLDLASAGGRGLPGRTCAARPRVDREAEGLRPKEQVLRLLG EGRK G   ASFVDAWRSGAVQTAFVEHVRRRL EDSPKPTIL LETAPVYYDACLTGGTLRALASLCARQGVALVTDEVMLSVRCGRPLSSDYARSFRPDAAVLGSKALGSAFVVVRR SPLKHAFRSQPMMVGQEISA AAEAAVRAIDYILREDLM YIAGEGEARRRAAGASGAG LWHDAPRE ASAFPAY RG+RVLLPLDYRFPP+GGEGA    VADR P    A E RATRS    L ++P A
Sbjct:    1 MARWARQWPSESAKRHHRAALARARNRVHAARLRANPDLLKRRRELHREAQRRCLARQRELLRAGSGNRSDGGPEPPTPREQRAGEEERAEATADGIPPVPDGVQQPPSPPAVPEPARPERVV--REGDDVAAXXXXXXXXXXXXXXXXXXXXXXXXXGD--AEPADG-PAAAAAERWEDERGPSSPPPYLKDGYCPFRGLRASPPCARYYVDDPVYERLRLALERLVPGYELLAASSCSSDLLGLVHQWATCFGGETAGVCLDLASAGGRGLPGRTCAARPRVDREAEGLRPKEQVLRLLGGEGRKGGCGPASFVDAWRSGAVQTAFVEHVRRRLAEDSPKPTILLLETAPVYYDACLTGGTLRALASLCARQGVALVTDEVMLSVRCGRPLSSDYARSFRPDAAVLGSKALGSAFVVVRRQSPLKHAFRSQPMMVGQEISAAAAEAAVRAIDYILREDLMAYIAGEGEARRRAAGASGAGYLWHDAPREAASAFPAYARGTRVLLPLDYRFPPEGGEGAVPPFVADRSPPAPAAGERRATRSGSRSLVATPPA 550

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349344 vs. uniprot

BLAST of jgi.p|Trimin1|349344 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835YTA0_9STRA	0.000e+0	100.00	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
A0A835Z2G4_9STRA	1.810e-264	76.40	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015421	Pyridoxal phosphate-dependent transferase, major domain	GENE3D	3.40.640.10		coord: 227..432 e-value: 1.4E-7 score: 32.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 730..821
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 493..542
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
IPR015424	Pyridoxal phosphate-dependent transferase	SUPERFAMILY	53383	PLP-dependent transferases	coord: 305..451

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_41	contig	Contig_41:884467..887464 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349344	mRNA_4501	Tribonema minus UTEX_B_3156	mRNA	Contig_41 884467..887464 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|349344|estExt_Genemark1.C_Ctg_410124 ID=Trimin1|349344|estExt_Genemark1.C_Ctg_410124|Name=jgi.p|Trimin1|349344|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=822bp
MARWARQWPSPEAKRQHRVALARARCRTHVARLRANPDLLRSRRERHLAA
QKRWLAKQRGGAGGEGGDRSTGGPEPPYPPEQQAGEDGGTGTKEEEFLSV
PDEARRPSSPPSVPESPRSERVDAGEAGADVPPRGEGDEAAEPAPAEPAA
AEGEWWEEERGPSSPPPYLKDGYCPFRGLRASPPCARYYVDDPVYERLRL
ALERLVPGYELLAASSCSSDLLGLVHQWATCFGGETAGACLDLASAGGRG
LPGRTCAARPRVDREAEGLRPKEQVLRLLGEEGRKSGSASFVDAWRSGAV
QTAFVEHVRRRLVEDSPKPTILFLETAPVYYDACLTGGTLRALASLCARQ
GVALVTDEVMLSVRCGRPLSSDYARSFRPDAAVLGSKALGSAFVVVRRLS
PLKHAFRSQPMMVGQEISAEAAEAAVRAIDYILREDLMGYIAGEGEARRR
AAGASGAGDLWHDAPREVASAFPAYTRGSRVLLPLDYRFPPDGGEGAAEE
TVADRPPPPPTADEGRATRSRRSPLPSSPLAPLASEHVSADLSESSTRGG
LGCGSEYLIDYGRRGLLQKANAPLLRHGRAFTPGWPDMSRPVNARRFSFR
VRDTHGRLDAPGFARRALGLKIGNPRRPSEPVSEVRYCEEGEGWAFSVRC
HPGSANVRRHLVECLPAPFREGWDLQTEDPNLGTSTDGREVFVERWAGRA
TVSPELGTEERRVSEAKRYPWTRECAVGGVRQADEGPGAIRQDARSGAAS
LREGRRLQSRDARANISPARARAAPTAETSGPAASAVASVTVPALAPAPA
AEGNRRDLEEAESDDDDQDYI*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015421	PyrdxlP-dep_Trfase_major
IPR015424	PyrdxlP-dep_Trfase